Surface abundance change in vacuum ultraviolet photodissociation of CO2 and H2O mixture ices

Photodissociation of amorphous ice films of carbon dioxide and water co-adsorbed at 90 K was carried out at 157 nm using oxygen-16 and -18 isotopomers with a time-of-flight photofragment mass spectrometer. O((3)P(J)) atoms, OH (v = 0) radicals, and CO (v = 0,1) molecules were detected as photofragments. CO is produced directly from the photodissociation of CO(2). Two different adsorption states of CO(2), i.e., physisorbed CO(2) on the surface of amorphous solid water and trapped CO(2) in the pores of the film, are clearly distinguished by the translational and internal energy distributions of the CO molecules. The O atom and OH radical are produced from the photodissociation of H(2)O. Since the absorption cross section of CO(2) is smaller than that of H(2)O at 157 nm, the CO(2) surface abundance is relatively increased after prolonged photoirradiation of the mixed ice film, resulting in the formation of a heterogeneously layered structure in the mixed ice at low temperatures. Astrophysical implications are discussed.     

A mechanistic study of the FeO+-mediated decomposition pathways of phenol, anisol, and their thio analogues

The gas-phase oxidations of phenol, anisol, thiophenol, and thioanisol by 'bare' FeO+ are examined by using Fourier transform-ion cyclotron resonance (FT-ICR) and tandem mass-spectrometry. Reaction mechanisms are derived on the basis of isotope-labeling experiments, MS/MS studies, and comparison with structural isomers, that is ions formed by independent routes. The chemistry of all substrates is determined by the functional groups, whereas reactions typical of unsubstituted benzene with FeO+ are suppressed. For phenol and thiophenol, four-membered metallacycles are obtained concomitant with a regioselective loss of water, which involves the O atom from the FeO+ entity and hydrogen atoms originating from the functional group and from the ortho position of the ring. C-H bond cleavage of the methoxy group (kH/kD = 2.0) is rate-contributing for the degradation of metastable anisol/FeO+, which is featured by highly regioselective losses of H2O, HCO, H2CO, and [C,H2,O2]. In the oxidation of thioanisol, two different C-H bond activation mechanisms are operating, resulting in the elimination of [Fe,H,O,S] concomitant with the formation of the benzyl cation (kH/kD = 4.7), and loss of water (kH/kD = 2.5). The reactions of independently generated, formal S- and C-oxidation intermediates of thioanisol indicate the occurrence of extensive structural isomerizations prior to dissociation. For anisol and thioanisol, analogies and differences between oxidation reactions catalyzed by the enzyme cytochrome P-450 in the condensed phase and those observed for the gas-phase model FeO+ are discussed.     

甲醇与氧在银钯合金上的吸附和反应

本文运用UPS、超高真空程序升温反应谱(TPRS)研究了氧和甲醇在银钯合金上的吸附和反应。实验结果表明, 合金表面存在两种分别与Ag和Pd原子有关的活性位; 少量钯原子的存在, 一方面提供了甲醇分解反应的活性中心, 另一方面通过与银之间的电子相互作用, 削弱了氧与银的结合, 增强了表面吸附氧的反应活性, 从而改变了甲醇氧化反应的选择性。     

单晶Au表面和Au/TiO2（110）模型催化剂表面CO氧化反应机理和活性位

在分子尺度上介绍了Au/TiO2(110)模型催化剂表面和单晶Au表面CO氧化反应机理和活性位、以及H2O的作用.在低温(<320 K), H2O起着促进CO氧化的作用, CO氧化的活性位位于金纳米颗粒与TiO2载体界面(Auδ+–Oδ––Ti)的周边. O2和H2O在金纳米颗粒与TiO2载体界面边缘处反应形成OOH,而形成的OOH使O–O键活化,随后OOH与CO反应生成CO2.300 K时CO2的形成速率受限于O2压力与该反应机理相印证.相反,在高温(>320 K)下,因暴露于CO中而导致催化剂表面重组,在表面形成低配位金原子.低配位的金原子吸附O2,随后O2解离,并在金属金表面氧化CO.     

Spectroscopic identification of the CO-H2O 2-1 cluster trapped in an argon matrix

The infrared spectra of the carbon monoxide-water cluster as well as the CO monomer and dimer in an argon matrix at cryogenic temperatures have been reinvestigated on the basis of the isotope substitution experiment with 12CO and 13CO. Lines due to the CO-H2O 2-1 cluster in the matrix have been unambiguously identified in the CO and OH stretching regions. The isotope effect on the vibrational frequency of the cluster is observed in the CO stretching vibration but neither in the symmetric nor antisymmetric OH stretching vibrations. Each of the two vibrational lines due to the two CO vibrations of the CO-H2O 2-1 cluster is examined by comparing the expected spectral features at a 12CO/13CO ratio on a simulation with those observed experimentally. The migration of the trapped molecules (CO and H2O) in the matrix is discussed, in which the observed spectral change with the deposition temperature from 14 K to 30 K is explained.     

Rate constants for hydrogen atom transfer reactions from bis(cyclopentadienyl)titanium(III) chloride-complexed water and methanol to an alkyl radical

Rate constants for hydrogen atom transfer reactions of the water, deuterium oxide, and methanol complexes of bis(cyclopentadienyl)titanium(III) chloride with the secondary alkyl radical 1-cyclobutyldodecyl (2) were determined using indirect kinetic methods. The rate constant for reaction of Cp2Ti(III)Cl-H2O in THF at ambient temperature was 1.0 x 10(5) M(-1) s(-1), and the kinetic isotope effect was kH/kD = 4.4. In benzene containing 0.95 M methanol, the rate constant for reaction of the Cp2Ti(III)Cl-MeOH at ambient temperature was 7.5 x 10(4) M(-1) s(-1). An Arrhenius function for reaction of the Cp2Ti(III)Cl-H2O complex in THF was log k = 9.1 - 5.5/2.3 RT (kcal/mol). The entropic term for reaction of Cp2Ti(III)Cl-H2O was normal, whereas the entropic term previously found for reaction of the Et3B-H2O complex with radical 2 was unusually small (Jin, J.; Newcomb, M. J. Org. Chem. 2007, 72, 5098).     

Solvent effects on the oxidation of RuIV=O to O=RuVI=O by MnO4-. hydrogen-atom versus oxygen-atom transfer

The kinetics of the oxidation of trans-[RuIV(tmc)(O)(solv)]2+ to trans-[RuVI(tmc)(O)2]2+ (tmc is 1,4,8,11-tetramethyl-1,4,8,11-tetraazacyclotetradecane, a tetradentate macrocyclic tertiary amine ligand; solv = H2O or CH3CN) by MnO4- have been studied in aqueous solutions and in acetonitrile. In aqueous solutions the rate law is -d[MnO4]/dt = kH2O[RuIV][MnO4-] = (kx + (ky)/(Ka)[H+])[RuIV][MnO4-], kx = (1.49 +/- 0.09) x 101 M-1 s-1 and ky = (5.72 +/- 0.29) x 104 M-1 s-1 at 298.0 K and I = 0.1 M. The terms kx and ky are proposed to be the rate constants for the oxidation of RuIV by MnO4- and HMnO4, respectively, and Ka is the acid dissociation constant of HMnO4. At [H+] = I = 0.1 M, DeltaH and DeltaS are (9.6 +/- 0.6) kcal mol-1 and -(18 +/- 2) cal mol-1 K-1, respectively. The reaction is much slower in D2O, and the deuterium isotope effects are kx/kxD = 3.5 +/- 0.1 and ky/kyD = 5.0 +/- 0.3. The reaction is also noticeably slower in H218O, and the oxygen isotope effect is kH216O/kH218O = 1.30 +/- 0.07. 18O-labeled studies indicate that the oxygen atom gained by RuIV comes from water and not from KMnO4. These results are consistent with a mechanism that involves initial rate-limiting hydrogen-atom abstraction by MnO4- from coordinated water on RuIV. In acetonitrile the rate law is -d[MnO4-]/dt = kCH3CN[RuIV][MnO4-], kCH3CN = 1.95 +/- 0.08 M-1 s-1 at 298.0 K and I = 0.1 M. DeltaH and DeltaS are (12.0 +/- 0.3) kcal mol-1 and -(17 +/- 1) cal mol-1 K-1, respectively. 18O-labeled studies show that in this case the oxygen atom gained by RuIV comes from MnO4-, consistent with an oxygen-atom transfer mechanism.     

Kinetic isotope effects on the dissolution kinetics of solid salicylic acid in aqueous solution: evidence for solubilisation via a proton dissociation-recombination mechanism

Quantitative Atomic Force Microscopy measurements made on the dissolving surface of solid salicylic acid in H2O and D2O reveal a kinetic isotope effect (kH/kD = 2.3 +/- 0.6) on the dissolution rate consistent with a transition state in which the proton is dissociated from the dissolving molecule.     

Zinc and cadmium dihydroxide molecules: matrix infrared spectra and theoretical calculations

Laser-ablated zinc and cadmium atoms were mixed uniformly with H2 and O2 in excess argon or neon and with O2 in pure hydrogen or deuterium during deposition at 8 or 4 K. UV irradiation excites metal atoms to insert into O2 producing OMO molecules (M = Zn, Cd), which react further with H2 to give the metal hydroxides M(OH)2 and HMOH. The M(OH)2 molecules were identified through O-H and M-O stretching modes with appropriate HD, D2, (16,18)O2, and (18)O2 isotopic shifts. The HMOH molecules were characterized by O-H, M-H, and M-O stretching modes and an M-O-H bending mode, which were particularly strong in pure H2/D2. Analogous Zn and Cd atom reactions with H2O2 in excess argon produced the same M(OH)2 absorptions. Density functional theory and MP2 calculations reproduce the IR spectra of these molecules. The bonding of Group 12 metal dihydroxides and comparison to Group 2 dihydroxides are discussed. Although the Group 12 dihydroxide O-H stretching frequencies are lower, calculated charges show that the Group 2 dihydroxide molecules are more ionic.     

Inhibition of CO oxidation on RuO2(110) by adsorbed H2O molecules

Catalytic CO oxidation on the RuO(2)(110) surface was studied at 300 K by scanning tunneling microscopy (STM), high-resolution electron-energy-loss spectroscopy (HREELS), and thermal desorption spectroscopy (TDS). Upon repeatedly exposing the surface to several 10 L of CO and O(2) at 300 K, STM shows that unreactive features accumulate with each CO and O(2) titration run. HREELS and TDS show formation of increasing amounts of H(2)O, retarded formation of O-cus atoms and incomplete removal of CO-bridge molecules during O(2) dosing, and a changing ratio of single- and double-bonded CO-bridge molecules. It is concluded that H(2)O (presumably from the residual gas) is accumulating at the Ru-cus sites thus blocking them, so that the dissociative adsorption of oxygen is prevented and the CO oxidation reaction is suppressed. Some 10% CO- bridge remains on the surface even during oxygen exposure. Consistent with this interpretation, deactivation of the surface is suppressed at 350 K, at the onset of H(2)O desorption.     

Kinetics of the O + HCNO reaction

The kinetics of the O + HCNO reaction were investigated by a relative rate technique using infrared diode laser absorption spectroscopy. Laser photolysis (355 nm) of NO2 was used to produce O atoms, followed by O atom reactions with CS2, NO2, and HCNO, and infrared detection of OCS product from the O + CS2 reaction. Analysis of the experiment data yields a rate constant of k1= (9.84 +/- 3.52) x 10-12 exp[(-195 +/- 120)/T)] (cm3 molecule-1 s-1) over the temperature range 298-375 K, with a value of k1 = (5.32 +/- 0.40) x 10-12 cm3 molecule-1 s-1 at 298 K. Infrared detection of product species indicates that CO producing channels, probably CO + NO + H, dominate the reaction.     

Infrared spectrum and structure of the Hf(OH)4 molecule

Laser-ablated Hf atoms react with H2O2 and with H2 + O2 mixtures in solid argon to form the Hf(OH)2 and Hf(OH)4 molecules, which are identified from the effect of isotopic substitution on the matrix infrared spectra. Electronic structure calculations at the MP2 level varying all bond lengths and angles converge to nearly linear and tetrahedral molecules, respectively, and predict frequencies for these new product molecules and mixed isotopic substituted molecules of lower symmetry that are in excellent agreement with observed values, which confirms the identification of these hafnium hydroxide molecules. This work provides the first evidence for a metal tetrahydroxide molecule and shows that the metal atom reaction with H2O2 in excess argon can be used to form pure metal tetrahydroxide molecules, which are not stable in the solid state.     

Towards the experimental decomposition rate of carbonic acid (H2CO3) in aqueous solution

Dry carbonic acid has recently been shown to be kinetically stable even at room temperature. Addition of water molecules reduces this stability significantly, and the decomposition (H2CO3 + nH2O --> (n+1)H2O + CO2) is extremely accelerated for n = 1, 2, 3. By including two water molecules, a reaction rate that is a factor of 3000 below the experimental one (10 s(-1)) at room temperature was found. In order to further remove the gap between experiment and theory, we increased the number of water molecules involved to 3 and took into consideration different mechanisms for thorough elucidation of the reaction. A mechanism whereby the reaction proceedes via a six-membered transition state turns out to be the most efficient one over the whole examined temperature range. The determined reaction rates approach experimental values in aqueous solution reasonably well; most especially, a significant increase in the rates in comparison to the decomposition reaction with fewer water molecules is found. Further agreement with experiment is found in the kinetic isotope effects (KIE) for the deuterated species. For water-free carbonic acid, the KIE (i.e., kH2CO3/kD2CO3) for the decomposition reaction is predicted to be 220 at 300 K, whereas it amounts to 2.2-3.0 for the investigated mechanisms including three water molecules. This result is therefore reasonably close to the experimental value of 2 (at 300 K). These KIEs are in much better accordance with the experiment than the KIE for decomposition with fewer water entities.     

Kinetics of CO oxidation on high-concentration phases of atomic oxygen on Pt(111)

Temperature-programmed reaction spectroscopy (TPRS) and direct, isothermal reaction-rate measurements were employed to investigate the oxidation of CO on Pt(111) covered with high concentrations of atomic oxygen. The TPRS results show that oxygen atoms chemisorbed on Pt(111) at coverages just above 0.25 ML (monolayers) are reactive toward coadsorbed CO, producing CO(2) at about 295 K. The uptake of CO on Pt(111) is found to decrease with increasing oxygen coverage beyond 0.25 ML and becomes immeasurable at a surface temperature of 100 K when Pt(111) is partially covered with Pt oxide domains at oxygen coverages above 1.5 ML. The rate of CO oxidation measured as a function of CO beam exposure to the surface exhibits a nearly linear increase toward a maximum for initial oxygen coverages between 0.25 and 0.50 ML and constant surface temperatures between 300 and 500 K. At a fixed CO incident flux, the time required to reach the maximum reaction rate increases as the initial oxygen coverage is increased to 0.50 ML. A time lag prior to the reaction-rate maximum is also observed when Pt oxide domains are present on the surface, but the reaction rate increases more slowly with CO exposure and much longer time lags are observed, indicating that the oxide phase is less reactive toward CO than are chemisorbed oxygen atoms on Pt(111). On the partially oxidized surface, the CO exposure needed to reach the rate maximum increases significantly with increases in both the initial oxygen coverage and the surface temperature. A kinetic model is developed that reproduces the qualitative dependence of the CO oxidation rate on the atomic oxygen coverage and the surface temperature. The model assumes that CO chemisorption and reaction occur only on regions of the surface covered by chemisorbed oxygen atoms and describes the CO chemisorption probability as a decreasing function of the atomic oxygen coverage in the chemisorbed phase. The model also takes into account the migration of oxygen atoms from oxide domains to domains with chemisorbed oxygen atoms. According to the model, the reaction rate initially increases with the CO exposure because the rate of CO chemisorption is enhanced as the coverage of chemisorbed oxygen atoms decreases during reaction. Longer rate delays are predicted for the partially oxidized surface because oxygen migration from the oxide phase maintains high oxygen coverages in the coexisting chemisorbed oxygen phase that hinder CO chemisorption. It is shown that the time evolution of the CO oxidation rate is determined by the relative rates of CO chemisorption and oxygen migration, R(ad) and R(m), respectively, with an increase in the relative rate of oxygen migration acting to inhibit the reaction. We find that the time lag in the reaction rate increases nearly exponentially with the initial oxygen coverage [O](i) (tot) when [O](i) (tot) exceeds a critical value, which is defined as the coverage above which R(ad)R(m) is less than unity at fixed CO incident flux and surface temperature. These results demonstrate that the kinetics for CO oxidation on oxidized Pt(111) is governed by the sensitivity of CO binding and chemisorption on the atomic oxygen coverage and the distribution of surface oxygen phases.     

Density functional theory of water-gas shift reaction on molybdenum carbide

The density functional theory (DFT) of the water-gas shift (WGS) reaction over molybdenum carbide was studied with the aim of understanding the dissociation of H(2)O, the OH group, and CO to determine on what sections of molybdenum carbide CO(2) and H(2) formed and whether they played a role in the reaction. The energy diagram of each elementary step, the reaction of the hydrogen and oxygen atoms with CO, and the transition state for this elementary step were also studied. The IR spectra of the CO adsorption was experimentally analyzed for the identification of several candidates of the CO adsorption modes. The adsorptions of the threefold Mo site (a) with and (b) without the underlying C atom of the second layer have the second and highest adsorption energies of -281.59 and -321.00 kJ/mol, respectively. The IR data showed that the bands at 1626 cm(-1) from the IR experiments are (a) the nearest adsorption of the threefold Mo site with the underlying C atom at the calculated/corrected band of 1621 cm(-1). The calculated/corrected threefold adsorption (b) had the highest adsorption energy but exhibited an IR band at 1147 cm(-1) which was not observed in the experimental data. The C-O bond length increased to 1.49 from 1.36 after the H(2)O adsorption (b), suggesting the dissociation of C-O after the H(2)O coadsorption. The WGS reaction on the beta-Mo(2)C(001) slab carbide was calculated and took place as follows: H(2)O was dissociated into OH and H on the Mo(2)C surface and the OH subsequently dissociated into H and O atoms. CO approached the O atom to form CO(2).     

Trapping and release of CO2 guest molecules by amorphous ice

Interactions of 13CO2 guest molecules with vapor-deposited porous H2O ices have been examined using temperature-programmed desorption (TPD) and Fourier transform infrared (FTIR) techniques. Specifically, the trapping and release of 13CO2 by amorphous solid water (ASW) has been studied. The use of 13CO2 eliminates problems with background CO2. Samples were prepared by (i) depositing 13CO2 on top of ASW, (ii) depositing 13CO2 underneath ASW, and (iii) codepositing 13CO2 and H2O during ASW formation. Some of the deposited 13CO2 becomes trapped when the ice film is annealed. The amount of 13CO2 trapped in the film depends on the deposition method. The release of trapped molecules occurs in two stages. The majority of the trapped 13CO2 escapes during the ASW-to-cubic ice phase transition at 165 K, and the rest desorbs together with the cubic ice film at 185 K. We speculate that the presence of 13CO2 at temperatures up to 185 K is due to 13CO2 that is trapped in cavities within the ASW film. These cavities are similar to ones that trap the 13CO2 that is released during crystallization. The difference is that 13CO2 that remains at temperatures up to 185 K does not have access to escape pathways to the surface during crystallization.     

Kinetics of hydrogen atom transfer from (eta(5)-C(5)H(5))Cr(CO)(3)H to various olefins: influence of olefin structure

Treating (etha(5)-C(5)H(5))Cr(CO)3H (1) or (etha(5)-C(5)H(5))Cr(CO)3D (1-d(1)) with an excess of olefin containing the opposite isotope generally leads to H/D exchange, although hydrogenation is also observed in some cases. Application of an appropriate statistical correction to the observed exchange rate gives kH and kD, the rate constants for H* (D*) transfer from (etha(5)-C(5)H(5))Cr(CO)(3)H (D) to various olefins. The values of kH and kD vary appreciably with the substituents on the double bond. Phenyl-substituted olefins accept H* more readily than do carbomethoxy-substituted olefins, although the latter accept H* more readily than do alkyl-substituted olefins. A methyl substituent on the incipient radical site increases k(H) at 323 K by a factor between 5 and 50. A methyl substituent on the carbon to which the H* is being transferred decreases kH substantially. On the whole, the rate constants for H* transfer reflect steric effects as well as the stability of the resulting carbon-centered radicals.     

Determination of the CH + O2 product channels

The multichannel CH + O2 reaction was studied at room temperature, in a low-pressure fast-flow reactor. CH radical was obtained from the reaction of CHBr3 with potassium atoms. The overall rate constant was determined from the decay of CH with distance, O2 being introduced in excess. The result, after corrections for axial and radial diffusion, is k = (3.6 +/- 0.5) x 10(-11) cm3 molecule-1 s-1. The OH(A2 sigma +) chemiluminescence was observed, confirming the existence of the OH + CO channel. The vibrational population distribution of OH(A2 sigma +) is 32% in the v' = 1 level and 68% in the v' = 0 level (+/- 5%). The relative atomic concentrations were determined by resonance fluorescence in the vacuum ultraviolet. A ratio of 1.4 +/- 0.2 was found between the H atom density (H atoms being produced from the H + CO2 channel and from the HCO dissociation) and the O atom density (O + HCO). Ab initio calculations of the transition structures have been performed, associated with statistical estimations. The estimated branching ratios are: O + HCO, 20%; O + H + CO, 30%; H + CO2, 30%; and CO + OH, 20%.     

Molecular-dynamics study of photodissociation of water in crystalline and amorphous ices

We present the results of classical dynamics calculations performed to study the photodissociation of water in crystalline and amorphous ice surfaces at a surface temperature of 10 K. A modified form of a recently developed potential model for the photodissociation of a water molecule in ice [S. Andersson et al., Chem. Phys. Lett. 408, 415 (2005)] is used. Dissociation in the top six monolayers is considered. Desorption of H(2)O has a low probability (less than 0.5% yield per absorbed photon) for both types of ice. The final outcome strongly depends on the original position of the photodissociated molecule. For molecules in the first bilayer of crystalline ice and the corresponding layers in amorphous ice, desorption of H atoms dominates. In the second bilayer H atom desorption, trapping of the H and OH fragments in the ice, and recombination of H and OH are of roughly equal importance. Deeper into the ice H atom desorption becomes less important and trapping and recombination dominate. Motion of the photofragments is somewhat more restricted in amorphous ice. The distribution of distances traveled by H atoms in the ice peaks at 6-7 Angstroms with a tail going to about 60 Angstroms for both types of ice. The mobility of OH radicals is low within the ice with most probable distances traveled of 2 and 1 Angstrom for crystalline and amorphous ices, respectively. OH is, however, quite mobile on top of the surface, where it has been found to travel more than 80 Angstroms. Simulated absorption spectra of crystalline ice, amorphous ice, and liquid water are found to be in very good agreement with the experiments. The outcomes of photodissociation in crystalline and amorphous ices are overall similar, but with some intriguing differences in detail. The probability of H atoms desorbing is 40% higher from amorphous than from crystalline ice and the kinetic-energy distribution of the H atoms is on average 30% hotter for amorphous ice. In contrast, the probability of desorption of OH radicals from crystalline ice is much higher than that from amorphous ice.     

Characterisation of the citrate synthase reaction with propionyl-CoA

Experiments with propionyl-CoA stereoselectively deuteriated in the propionyl moiety demonstrate that the formation of (2S,3S)-methylcitric acid (1) catalysed by citrate (si)-synthase occurs with inversion of configuration in the propionyl moiety; the absolute configurations of the methylcitric acids 1 and 2 indicate a si attack on oxaloacetate. Deuterium in the pro-S position is exchanged for protium 60 times faster than deuterium in the pro-R position. Experiments with (R,S)-(2-2H1)propionyl-CoA allowed the determination of isotope effects. For the enzymatic formation of 1, a primary deuterium isotope effect kH/kD = 1.8 and a secondary alpha-deuterium isotope effect kH/kD = 0.99 were calculated; both are effects on Vmax/KM.