Mechanism of Oxidative Amidation of Nitroalkanes with Oxygen and Amine Nucleophiles by Using Electrophilic Iodine

Recently, we developed a direct method to oxidatively convert primary nitroalkanes into amides that entailed mixing an iodonium source with an amine, base, and oxygen. Herein, we systematically investigated the mechanism and likely intermediates of such methods. We conclude that an amine–iodonium complex first forms through N?halogen bonding. This complex reacts with aci‐nitronates to give both α‐iodo‐ and α,α‐diiodonitroalkanes, which can act as alternative sources of electrophilic iodine and also generate an extra equimolar amount of I⁺ under O₂. In particular, evidence supports α,α‐diiodonitroalkane intermediates reacting with molecular oxygen to form a peroxy adduct; alternatively, these tetrahedral intermediates rearrange anaerobically to form a cleavable nitrite ester. In either case, activated esters are proposed to form that eventually reacts with nucleophilic amines in a traditional fashion.     

Fibril Structure Demonstrates the Role of Iodine Labelling on a Pentapeptide Self-Assembly

Iodination has long been employed as a successful labelling strategy to gain structural insights into proteins and other biomolecules via several techniques, including Small Angle X-ray Scattering, Inductively Coupled Plasma Mass Spectrometer (ICP-MS), and single-crystal crystallography. However, when dealing with smaller biomolecular systems, interactions driven by iodine may significantly alter their self-assembly behaviour. The engineering of amyloidogenic peptides for the development of ordered nanomaterials has greatly benefitted from this possibility. Still, to date, iodination has exclusively been applied to aromatic residues. In this work, an aliphatic bis-iodinated amino acid was synthesized and included into a custom pentapeptide, which showed enhanced fibrillogenic behaviour. Peptide single crystal X-ray structure and powder X-ray diffraction on its dried water solution demonstrated the key role of iodine atoms in promoting intermolecular interactions that drive the peptide self-assembly into amyloid fibrils. These findings enlarge the library of halogenated moieties available for directing and engineering the self-assembly of amyloidogenic peptides.     

氯化亚铁催化的醛与伯胺和仲胺的氧化酰胺化反应

酰胺化反应是合成含有酰胺键的天然产物、材料以及药物分子中一类非常重要的化学反应.发展高原子经济性和环境友好的新型酰胺键的合成方法仍然是该领域具有重要研究意义和价值的研究内容.报道了在氯化亚铁作为催化剂和叔丁基过氧化氢作为氧化剂的条件下,实现了芳香醛和脂肪醛分别与伯胺和仲胺的直接酰胺化反应,获得了较高的收率.进一步研究发现,该反应体系对氮杂环化合物也有较好的适用性.     

Stereoselective Synthesis of Enamides through Palladium-Catalyzed Oxidative Amidation of Conjugated Olefins with 2-Pyridones

A palladium-catalyzed oxidative amidation of conjugated olefin with 2-pyridone is described. A series of E-Enamides were synthesized in a highly stereocontrolled manner. The reaction also accommodates other cyclic and acyclic amides. Z-Enamides were predominantly prepared for primary amides probably due to the presence of an intramolecular hydrogen bond. Gram-scale synthesis of enamide and the following oxidative annulation with diphenylacetylene demonstrates the synthetic utility of this reaction.     

Organocatalytic Oxidative Amidation of Aldehydes with Tetrazoles to Construct 2,5‐Diaryl 1,3,4‐Oxadiazoles

A practical and metal‐free oxidative amidation of aldehydes with tetrazoles into 1,3,4‐oxadiazoles has been developed by employing tetrabutylammonium iodide (TBAI) as catalyst and tert‐butyl hydroperoxide (TBHP) as oxidant. A wide range of 2,5‐disubstituted 1,3,4‐oxadiazoles can be conveniently generated in moderate to good yields. Gram‐scale reaction was also realized in this catalytic system.     

Visible‐Light‐Induced Direct Oxidative C−H Amidation of Heteroarenes with Sulfonamides

A direct oxidative C?H amidation of heteroarenes with sulfonamides via nitrogen‐centered radicals has been achieved. Nitrogen‐centered radicals are directly generated from oxidative cleavage of N?H bonds under visible‐light photoredox catalysis. Sulfonamides, which are easily accessed, are used as tunable nitrogen sources and bleach (aqueous NaClO solution) is used as the oxidant. A variety of heteroarenes, including indoles, pyrroles and benzofurans, can undergo this amidation with high yields (up to 92 %). These reactions are highly regioselective, and all the products are isolated as single regioisomer.     

Direct Iodination of Aromatic Compounds with Polyvinylpyrrolidone Supported Hydrogen Peroxide (PVP-H2O2) and Potassium Iodide or Molecular Iodine

Hydrogen peroxide was supported on polyvinylpyrrolidone to afford a stable and mild oxidizing reagent.Acti-vated aromatic compounds were reacted with PVP-H_2O_2 in the presence of KI or I_2 and a catalytic amount ofH_3PW_(12)O_(40)in refluxing CH_2Cl_2 to afford the corresponding iodinated arenes.     

Oxidative Halogenation with “Green” Oxidants: Oxygen and Hydrogen Peroxide

It is difficult to imagine organic chemistry without organo‐halogen compounds and the molecular halogens needed for their preparation. The halogens have very different reactivity, with iodine usually requiring some form of activation, while others are reactive and hazardous chemicals. To avoid their use, various modified reagents have been discovered (N‐bromo‐ and N‐chlorosuccinimide, Selectfluor…?), but halogens are used to prepare these reagents and when they are used the atom economy is poor. A better approach, which is based on biomimetric research on oxidative halogenation in nature, consists of generating the halogenating reagent in situ under acidic conditions from a halide salt. The result of such a reaction has been halogenation with 100 % halogen atom economy. Suitable oxidants for the oxidation of halides are hydrogen peroxide and oxygen.     

Photolytic Studies on the Generation and Trapping of 6-Oxomethylidenecyclohexa-2,4-diene-1-one Derivatives with Various Nucleophiles

α-Oxoketenes and cyclohexadiene α-oxoketenes are reactive intermediates, particularly the latter due to their high re-aromatization potential. In this communication, we report photolytic studies on the generation of such species from 4-OMe and 4-OMOM protected resorcylate dioxinones and their trapping to give resorcylate esters and amides as well as the formation of adducts with enol-ethers as trapping reagents.     

Divergent and Chemoselective Transformations of Thioamides with Designed Carbene Equivalents

The reactions of thioamides with ortho-nitro-substituted iodonium ylides proceeded under mild conditions to give enaminones or thiazoles, depending on the iodonium ylide used. This protocol allowed the use of protic solvents, including aqueous solutions, and therefore coupling reactions with complex molecules such as peptides or steroids were possible. A mild and efficient method for the synthesis of various iodonium ylides was established. DFT calculations suggested that the halogen bonding between a thioamide and iodonium ylide was important in this chemoselective coupling reaction. The potential use of enaminones conjugated with pharmaceuticals as prodrugs was also demonstrated.     

Amidation of deltacyclene and hexacyclic norbornadiene dimers with acetonitrile and water catalyzed by FeCl3·6H2O

Abstract

FeCl₃·6H₂O-catalyzed Ritter amidation of deltacyclene and hexacyclic norbornadiene dimers containing both a double bond and a three-carbon ring in the molecule with acetonitrile and water was performed. Depending on the hydrocarbon structure, the reaction proceeds via C-C bond cleavage in the three-carbon ring or at the double bond to form the corresponding N-acetamides.     

Palladium‐Catalyzed Oxidative Intermolecular Difunctionalization of Terminal Alkenes with Organostannanes and Molecular Oxygen

A cationic palladium complex catalyzes the title transformations, which are thought to proceed via a π‐allyl or π‐benzyl intermediate. The regioselectivity of the reaction (1,2‐ or 1,1‐difunctionalization) depends on the type of terminal double bond (conjugated or nonconjugated) in the substrate (see scheme) and appears to be controlled by the relative rates of β‐hydride elimination and transmetalation. DMA=dimethylacetamide, Tf=triflyl.

     

Halogen Bonds of Halotetrafluoropyridines in Crystals and Co-crystals with Benzene and Pyridine

The structures of the three para-substituted halotetrafluoropyridines with chlorine, bromine, and iodine have been determined in the solid state (X-ray diffraction). The structures of these compounds and that of pentafluoropyridine were also determined in the gas phase (electron diffraction). Structures in the solid state of the bromine and iodine derivatives exhibit halogen bonding as a structure-determining motif. On the way to an investigation of halogen bond formation of halotetrafluoropyridines in the solid state with the stronger Lewis base pyridine, co-crystals of benzene adducts were investigated to gain an understanding of the influence of aryl–aryl interactions. These co-crystals showed halogen bonding only for the two heavier halotetrafluoropyridines. In the pyridine co-crystals halogen bonding was observed for all three para-halotetrafluoropyridines. The formation of homodimers and heterodimers with pyridine is also supported by quantum-chemical calculations of electron density topologies and natural bond orbitals.     

分子氧氧化四氢呋喃产物中γ-丁内酯、4-羟基丁酸与1,4-丁二酸的反相高效液相色谱法测定

建立了钴(Ⅱ)配合物催化分子氧氧化四氢呋喃(THF)产物中的γ-丁内酯(GBL)、γ-羟基丁酸(GHB)和1,4-丁二酸的反相高效液相色谱(RP-HPLC)分析方法。反应产物经离心、旋蒸后,以Inertsil ODS-3 C18色谱柱(250 mm×4.6 mm,5μm)进行分离,以0.01%甲酸-甲醇溶液为二元流动相,按流速为0.80 mL/min进行等度洗脱,采用二极管阵列检测器(波长220 nm)检测,外标法定量。实验结果表明,3种目标化合物在10.0~1 000 mg/L质量浓度范围内呈良好的线性关系,相关系数均不小于0.999 8,方法的检出限为0.019~0.052 mg,定量下限为0.064~0.173 mg,3个加标水平下3种待测物的回收率为95%~107%,相对标准偏差(RSD)为0.09%~4.7%。该法简便、准确,可用于THF氧化产物中3种目标化合物的分析及催化剂效果评价。     

A Combined Experimental and Computational Study of Halogen and Hydrogen Bonding in Molecular Salts of 5-Bromocytosine

Although natural or artificial modified pyrimidine nucleobases represent important molecules with valuable properties as constituents of DNA and RNA, no systematic analyses of the structural aspects of bromo derivatives of cytosine have appeared so far in the literature. In view of the biochemical and pharmaceutical relevance of these compounds, six different crystals containing proton-transfer derivatives of 5-bromocytosine are prepared and analyzed in the solid-state by single crystal X-ray diffraction. All six compounds are organic salts, with proton transfer occurring to the N_imino atom of the pyridine ring. Experimental results are then complemented with Hirshfeld surface analysis to quantitively evaluate the contribution of different intermolecular interactions in the crystal packing. Furthermore, theoretical calculations, based on different arrangements of molecules extracted from the crystal structure determinations, are carried out to analyze the formation mechanism of halogen bonds (XBs) in these compounds and provide insights into the nature and strength of the observed interactions. The results show that the supramolecular architectures of the six molecular salts involve extensive classical intermolecular hydrogen bonds. However, in all but one proton-transfer adducts, weak to moderate XBs are revealed by C–Br^…O short contacts between the bromine atom in the fifth position, which acts as XB donor (electron acceptor). Moreover, the lone pair electrons of the oxygen atom of adjacent pyrimidine nucleobases and/or counterions or water molecules, which acts as XB acceptor (electron donor).     

Cationic Cobalt(III)‐Catalyzed Aryl and Alkenyl CH Amidation: A Mild Protocol for the Modification of Purine Derivatives

A cationic cobalt(III)‐catalyzed direct C?H amidation of unactivated (hetero)arenes and alkenes by using 1,4,2‐dioxazol‐5‐ones as the amidating reagent has been developed. This transformation proceeds efficiently under external oxidant‐free conditions with a broad substrate scope. Moreover, 6‐arylpurine compounds, which often exhibit high potency in antimycobacterial, cytostatic, and anti‐HCV activities, can be smoothly amidated, thus offering a mild protocol for their late stage functionalization.     

Efficient Oxidation of Sulfide and Tertiary Amine by Molecular Oxygen/Aldehyde/Fe_2O_3 System

在温和的反应条件和催化剂Ｆｅ２Ｏ３存在下，结合使用分子氧和异戊醛，可高产率地发生硫醚氧化成亚砜和砜、叔胺氧化成氧化叔胺的反应。     

Benchmarking of Halogen Bond Strength in Solution with Nickel Fluorides: Bromine versus Iodine and Perfluoroaryl versus Perfluoroalkyl Donors

The energetics of halogen bond formation in solution have been investigated for a series of nickel fluoride halogen bond acceptors; trans-[NiF(2-C₅NF₄)(PEt₃)₂] ( A1 ), trans-[NiF{2-C₅NF₃(4-H)}(PEt₃)₂] ( A2 ), trans-[NiF{2-C₅NF₃(4-NMe₂)}(PEt₃)₂] ( A3 ) and trans-[NiF{2-C₅NF₂H(4-CF₃)}(PCy₃)₂] ( A4 ) with neutral organic halogen bond donors, iodopentafluorobenzene ( D1 ), 1-iodononafluorobutane ( D2 ) and bromopentafluorobenzene ( D3 ), in order to establish the significance of changes from perfluoroaryl to perfluoroalkyl donors and from iodine to bromine donors. ¹⁹F NMR titration experiments have been employed to obtain the association constants, enthalpy, and entropy for the halogen bond formed between these donor-acceptor partners in protiotoluene. For A2 – A4 , association constants of the halogen bonds formed with iodoperfluoroalkane ( D2 ) are consistently larger than those obtained for analogous complexes with the iodoperfluoroarene ( D1 ). For complexes formed with A2 – A4 , the strength of the halogen bond is significantly lowered upon modification of the halogen donor atom from I (in D1 ) to Br (in D3 ) (for D1 : 5≤K₂₈₅≤12 m ⁻¹, for D3 : 1.0≤K₁₉₃≤1.6 m ⁻¹). The presence of the electron donating NMe₂ substituent on the pyridyl ring of acceptor A3 led to an increase in −ΔH, and the association constants of the halogen bond complexes formed with D1 – D3 , compared to those formed by A1 , A2 and A4 with the same donors.