Selective generation of charge-cependent/independent ion energy distributions from a heated capillary electrospray source

Retarding grid and Fourier transform ion cyclotron resonance (FTICR) mass spectrometry variable trap potential measurements are performed to determine factors that contribute to the kinetic energy distribution of ions formed in an electrospray source that uses a heated capillary for desolvation. The control of ion kinetic energies is achieved by manipulating the skimmer position in the postcapillary expansion and by varying the potential appEed to the skimmer. The selective generation of either charge-dependent or charge-independent ion energy distributions is demonstrated. Charge-dependent energy distributions of electro-sprayed ions are created by sampling ions near the Mach disk of the supersonic expansion and by using a larger diameter skimmer orifice; the FTICR spectra acquired under these conditions exhibit mass-to-charge ratio-dependent mass discrimination determined by the potential used to trap the ions. Charge-independent energies of electrosprayed ions are created by positioning the capillary adjacent to the skimmer to sample thermal ions and by using a smaller skimmer orifice to reduce expansion cooling; under these conditions ion kinetic energy is determined primarily by the skimmer potential and no mass-to-charge ratio-dependence is observed in the selection of optimum FTICR trapping conditions. The ability to select between proteins of different conformation on the basis of kinetic energy differences is demonstrated. For example, a 0.4 V difference in trap potential is observed in the selective trapping of open and closed forms of the +10 charge state of lysozyme. Finally, it is demonstrated that by operating the source under conditions which deliver a beam of ions with charge-independent energies to the cell, it is possible to obtain precursor and product ion signal magnitudes in FTTCR spectra without charge-dependent mass discrimina-tion.     

Effect of electrospray ionization conditions on low-energy tandem mass spectra of peptides

The effect of electrospray ionization (ESI) conditions on low-energy tandem mass spectra of peptides in the relative molecular mass range 400–1200 was examined. For singly charged peptide ions the source skimmer potential (which determines the degree of acceleration of the ions through the intermediate pressure region in the source) can strongly influence the extent of fragmentation observed in tandem mass spectra, especially at low collision energies. For each peptide there is an optimum skimmer potential which represents a balance between generating ions with sufficient internal energy for subsequent tandem mass spectrometric experiments and inducing the onset of other processes such as source fragmentation. The fragmentation which can be achieved in tandem mass spectra with high skimmer potentials differs from ESI source fragmentation for the same peptides. We have found that fragmentation in ESI mass spectra depends both on skimmer potential and on solvent pH, presumably because the latter determines the proportion of doubly charged species generated from a given peptide. Low-energy tandem mass spectra of peptides following ESI are equally as sensitive to peptide structure and the type of adduct studied (e.g. [M + H]⁺ vs. [M + NH₄]⁺) as tandem mass spectra obtained following older ionization methods such as fast atom bombardment.     

The decomposition of a triply-charged metastable positive ion of biphenyl

The transition, [C12H10]⁺³→[C₁₁H₇]⁺² + [CH₃]⁺, has been detected both in the ion kinetic energy spectrum and in the mass spectrum of biphenyl. The width of a resulting ‘metastable peak’ has been measured by setting the magnetic field to accept [C₁₁H₇]⁺² ions and scanning the high voltage at fixed electric sector voltage. The kinetic energy released in the decomposition, calculated from the peak width, amounted to 4.5 eV. With the assumption that this energy release is due entirely to charge separation, the charge distribution in [C₁₂H₁₀]⁺³ is discussed. The derivation of the equations used to calculate the energy released is given in the Appendix.     

Electrospray mass spectra of protein cations formed in basic solutions

The electrospray mass spectra of gramicidin S cations that originated from 0.2 M solutions of 18 nitrogen-containing bases were examined. The relative abundances of the [M + 2H]²⁺ to the [M + H]⁺ ion were found to correlate not with the solution pH but with the proton affinities of the bases. It is postulated that some of the [M + 2H]²⁺ and the [M + H]⁺ ions exist as adducts with the nitrogen bases in solution, these adducts being desorbed into the gas phase during electrospray and dissociated in the lens region via collision-induced dissociations to yield apparent proton attachment spectra. Some of these adducts were observed under nominally zero collision energy conditions.     

Analysis of tetrabenzyl N-giucosidic,N-mannosidic and N-galactosidic Isomers using fast atom bombardment/mass-analysed ion kinetic energy spectrometry

A series of new synthetic tetrabenzyl N-glucosidic, N-mannosidic and N-galactosidic isomers were investigated by fast atom bombardment (FAB)/mass-analysed ion kinetic energy (MIKE) spectrometry. The [M + H]⁺ ions were obtained with high abundance in the FAB spectra when using 3-nitrobenzyl alcohol as the matrix. The FAB/MIKE spectra provide characteristic daughter ions fragmented from selected molecular parent ions, allowing these isomers to be differentiated. In addition, an interesting rearrangement was found from the MIKE spectra, indicating that the benzyl (Bzl) group on the sugar ring is rearranged on to the N atom of the base (R) group to form [R + Bzl + H]⁺ and [R+ 2Bzl]⁺ ions.     

Mass-analyzed ion kinetic energy spectra of the [M + 1]+ ions of aliphatic esters produced by chemical ionization

To test the similarity of chemical ionization (CI) spectra of esters to the collision-induced decomposition mass-analyzed ion kinetic energy (CID-MIKE) spectra of protonated esters, the CID-MIKE spectra of the [M + 1]⁺ ions of nineteen aliphatic esters were studied. The major fragments produced in the two kinds of experiment are similar, but there are significant differences in the ions of high mass, which would reduce the usefulness of library searches of CI spectra to identify MIKE spectra of [M + 1]⁺ ions.     

Differentiation of anomeric C-glycosides by mass spectrometry using fast atom bombardment,mass-analysed ion kinetic energy and collision-activated dissociation

Positive-ion fast atom bombardment mass spectrometry appears to be a useful method for the differentiation of anomeric C-glycosides. The mass-analysed ion kinetic energy (MIKE) and collision-activated dissociation (CAD) MIKE spectra of selected positive ions can be used as fingerprints of the α- or β-anomers. The main fragmentation routes and particularly the formation of the [M ? H]⁺ ion and the [M + H ? PhCH₂OH]⁺ ion were traced for each anomer.     

Ion-molecule reactions observed for nitroaromatic compounds in negative ion fast atom bombardment mass spectrometry

Analyses of a series of nitroaromatic compounds using fast atom bombardment (FAB) mass spectrometry are discussed. An interesting ion-molecule reaction leading to [M + O ? H]^? ions is observed in the negative ion FAB spectra. Evidence from linked-scan and collision-induced dissociation spectra proved that [M + O ? H]^? ions are produced by the following reaction: M + NO₂^? → [M + NO₂]^? → [M + O ? H]^?. These experiments also showed that M^?˙ ions are produced in part by the exchange of an electron between M and NO₂^? species. All samples showed M^?˙, [M ? H]^? or both ions in their negative ion FAB spectra. Not all analytes studied showed either [M + H]⁺ and/or M⁺˙ in the positive ion FAB spectra. No M⁺˙ ions were observed for ions having ionization energies above ～9 eV.     

Intrinsic acidity and basicity of neutral and ionic species of some polyether-ester compounds as shown by mass spectrometry

The mass spectrometric behaviour of benzo-[o]-1,4,7,10,13-pentaoxacycloheptadecane-14,17-dione (1), 3,6,9,12,15-pentaoxabicyclo[15.3.1]heneicosa-1(21),17,19-triene-2,16-dione (2) and 1,15-dioxo-2,5,8,11,14-pentaoxa[15](1,4)benzenophane (3) has been studied in detail with the aid of linked scans, mass-analysed ion kinetic energy spectra, collisionally activated decomposition experiments, exact mass measurements and different ionization techniques (electron impact, positive and negative ion chemical ionization, charge exchange, electron attachment). The very low abundance of molecular ions and the presence of abundant [M + H]⁺ and [M – H]⁺ ions under electron impact conditions indicate the presence of acidic and basic sites in the molecular ions and neutral molecules, respectively.     

Mass spectral fragmentation pathways in RDX and HMX. A mass analyzed ion kinetic energy spectrometric/collisional induced dissociation study

A collisional induced dissociation study of 1,3,5-trinitro-1,3,5 triazacyclohexane (RDX) and 1,3,5,7-tetranitro-1,3,5,7-tetrazacyclooctane (HMX) was carried out using mass analyzed kinetic energy spectrometry. High resolution mass spectra and mass analyzed ion kinetic energy/collisional induced dissociation spectra of RDX and HMX were recorded in the electron impact, chemical ionization and negative ion chemical ionization modes. Fragmentation pathways of the compounds investigated were determined in all three modes of ionization. It was found that a major part of the fragment ions in RDX and HMX originate from formation of the aduct ions [M+NO]⁺ and [M+NO₂]⁺ in electron impact and chemical ionization, and from [M+NO]^? and [M+NO₂]^? in negative chemical ionization, followed by dissociation.     

Rate and extent of gas-phase hydrogen/deuterium exchange of bradykinins: evidence for peptide zwitterions in the gas phase

The gas-phase H/D exchange of bradykinin [M + H]⁺, [M + Na]⁺, [M + 2H]²⁺, and [M + H + Na]²⁺ ions; des-Arg¹-bradykinin, des-Arg⁹-bradykinin, and bradykinin fragment 2-7 [M + H]⁺ ions; and O-methylbradykinin [M + H]⁺ and [M + 2H]²⁺ ions with D₂O have been examined by electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry at 9.4 T. The different peptides vary widely in exchange rate and extent of deuterium incorporation. H/D exchange was slowest and deuterium incorporation was least for bradykinin [M + H]⁺, [M + H + Na]²⁺ and bradykinin methyl ester [M + 2H]²⁺ ions. In contrast, H/D exchange and extent of deuteration are higher for des-Arg¹-bradykinin, des-Arg⁹-bradykinin, and bradykinin fragment 2-7 [M + H]⁺ ions; and highest for bradykinin [M + Na]⁺ and [M + 2H]²⁺, and O-methylbradykinin [M + H]⁺. Because the most likely site of protonation is the guanidino group of arginine, the above reactivity pattern strongly supports a zwitterion form for protonated gas-phase bradykinin.     

A study of some cations formed in the ammonia chemical ionization of ketones using mass analysed ion kinetic energy spectrometry

The structures of the major adduct ions formed in ammonia chemical ionization of thirteen aliphatic and aromatic ketones have been studied by mass analysed ion kinetic energy spectrometry. The [M+NH₃+H]⁺ ion is shown to have a protonated carbinolamine structure, [M+2NH₃+H]⁺ to be a protonated carbinolamine with hydrogen-bonded ammonia and [2M+NH₃+H]⁺ to be, at least in part, a protonated carbinolamine with hydrogen-bonded ketone. These structures may imply a nucleophilic addition of ammonia at the carbonyl of the ketone-ammonium ion complex. An unusual hydroxy migration is seen in the internal rearrangement of the [2M+NH₃+H]⁺ ion leading to the formation of a protonated imine.     

Hydrogen transfer in the retro diels–alder fragmentation of oxygen-containing heterocyclic compounds. II—Chromones

Mass Spectra of unsubstituted, 2-methyl-, 3-methyl and 2,3-dimethylchromones were examined. These compounds showed [RDA]⁺˙ and [RDA + H]⁺ ions as characteristc ions, together with [M? H]⁺,[M? CO]⁺˙,[M? CHO]⁺ and [RDA? CO]⁺˙ ions. Based on deuterium labelling experiments and measurement of metastable peaks by the ion kinetic energy defocusing technique, the origin of transferred hydrogen in the [RDA + H]⁺ ion was clarified. The mechanism of the [RDA + H]⁺ ion formation is discussed.     

A mass spectrometric investigation on some 4,7-dioxo-4,5,6,7-tetrahydroindole derivatives

The mass spectrometric behaviour of a series of 2-aryl substituted 4,7-dioxo-4,5,6,7-tetrahydroindoles has been studied in different ionization conditions (Electron Ionization and Fast Atom Bombardment), with the aid of the metastable ion studies. In electron ionization conditions all the compounds exhibit a highly favoured, primary H₂ loss giving rise to the corresponding indole-4,7-diones; in the usual spectra no evidence for the molecular ions in the enolic form was found, while the OH* loss observed in the MIKE (mass analyzed ion kinetic energy) spectra of molecular ions suggests that species at low internal energy content isomerize to the corresponding tautomeric enolic form. FAB mass spectra show easy formation of an unusual [M + 2H]⁺ species, together with abundant [M + H]⁺ and M⁺ cations.     

High field asymmetric waveform ion mobility spectrometry-mass spectrometry: an investigation of leucine enkephalin ions produced by electrospray ionization

High field asymmetric waveform ion mobility spectrometry (FAIMS) provides atmospheric pressure, room temperature, low-resolution separation of gas-phase ions. The FAIMS analyzer acts as an ion filter that can continuously transmit one type of ion, independent of m/z. The combination of FAIMS with electrospray ionization and mass spectrometry (ESI-FAIMS-MS) is a powerful technique and is used in this study to investigate the cluster ions of leucine enkephalin (YGGFL). Separation by FAIMS of leucine enkephalin ions having the same m/z (m/z 556.5), [M + H]⁺ and [2M + 2H]²⁺, was observed. In addition, four complex ions of leucine enkephalin, [2M + H]⁺, [4M + 2H]²⁺, [6M + 3H]³⁺, and [8M + 4H]⁴⁺, all having m/z 1112, were shown to be separated in FAIMS. Fragmentation of ions as the result of harsh conditions within the mass spectrometer interface (FAIMS-MS) was shown to provide similar information to that obtained from MS/MS experiments in conventional ESI-MS.     

Fragmentation pathways of 2,3‐dimethyl‐2,3‐dinitrobutane cations in the gas phase

2,3‐Dimethyl‐2,3‐dinitrobutane (DMNB) is an explosive taggant added to plastic explosives during manufacture making them more susceptible to vapour‐phase detection systems. In this study, the formation and detection of gas‐phase [M+H]⁺, [M+Li]⁺, [M+NH₄]⁺ and [M+Na]⁺ adducts of DMNB was achieved using electrospray ionisation on a triple quadrupole mass spectrometer. The [M+H]⁺ ion abundance was found to have a strong dependence on ion source temperature, decreasing markedly at source temperatures above 50°C. In contrast, the [M+Na]⁺ ion demonstrated increasing ion abundance at source temperatures up to 105°C. The relative susceptibility of DMNB adduct ions toward dissociation was investigated by collision‐induced dissociation. Probable structures of product ions and mechanisms for unimolecular dissociation have been inferred based on fragmentation patterns from tandem mass (MS/MS) spectra of source‐formed ions of normal and isotopically labelled DMNB, and quantum chemical calculations. Both thermal and collisional activation studies suggest that the [M+Na]⁺ adduct ions are significantly more stable toward dissociation than their protonated analogues and, as a consequence, the former provide attractive targets for detection by contemporary rapid screening methods such as desorption electrospray ionisation mass spectrometry. Copyright © 2009 Commonwealth of Australia. Published by John Wiley & Sons, Ltd.     

Identification of aminophospholipid stereomers by positive-ion fast atom bombardment combined with collisional activation mass-analysed ion kinetic energy analysis and high-performance liquid chromatography

Two methods for the identification of aminophospholipid stereomers are described. After a chemical derivatization, 9-fluorenylmethoxycarbonyl derivatives of diacyl-sn-2- and diacyl-sn-3-phosphoserine and diacyl-sn-2- and diacyl-sn-3-phosphoethanolamine can be characterized by positive-ion fast atom bombardment combined with collisional activation mass-analysed ion kinetic energy analysis based on the differentiation of relative abundances [M + H + diethanolamine ? 89]⁺ and [M + H]⁺ fragments derived from [M + H + diethanolamine]⁺ ions, the protonated solvated molecules, and normal phase high-performance liquid chromatography on the basis of different elution times of the derivatives of the aminophospholipid stereomers on an aminopropyl-bonded column.     

Charge localization: The ion kinetic energy spectra of pyrazine,pyrimidine and pyridazine

The ion kinetic energy (IKE) spectra of pyrazine, pyrimidine, pyridazine, pyrazine-d₄, pyrimidine-d₄ and pyridazine-d₄ have shown that these compounds can more readily be distinguished on the basis of IKE spectra than mass spectra. Studies of the fragmentation of various doublycharged ions have given information about the localization of charge on the heteroatoms and on the structures of the ions themselves. Transition states from which fragmentation occurs for doublycharged ions with loss of either [H]⁺ or [D]⁺ have shown large differences of the order 1 Å between the intercharge distances in the two cases.     

Influence of instrumental parameters and sample preparation on mass-analysed ion kinetic energy spectra with fast atom bombardment exemplified with the oxonium ion of peracetylated ribopyranose

When mass-analysed ion kinetic energy (MIKE) spectra are required to discriminate between isomeric ions formed under conditons of fast atom bombardment (FAB) in the ion source, severe interference may be observed. The interfering peaks in MIKE spectra obtained with a reversed-geometry instrument can arise from different sources. Moreover, the intensity distribution of the true ions from the selected precursor ion may depend strongly on the instrument being used. This means that the FAB–MIKE or collisionally induced dissociation (CID) spectrum is not an absolute characteristic of a particular ion. The [M + H ? HOAc]⁺ ion in the spectrum of peracetylated ribopyranose is used as an example to illustrate this and to trace and discuss the origin of the phenomena observed.     

Fast atom bombardment (FAB) mass spectrometry of piperidine N-oxide derivatives and free radical quenching under FAB conditions

Mechanisms are proposed for the formation of M⁺, [M + 2H]⁺ and [M + 3H]⁺ ions in the fast atom bombardment (FAB) mass spectra of 4-(2,2,6,6-tetramethyl-1-oxyl)-piperidol and its carboxylates. Free radical quenching induced by the fast atom beam has been observed. The effects of temperature on the radical quenching and of acid on the FAB mass spectra are discussed. The experiment showed that the volatile liquid samples with vapour pressures higher than that for glycerol produced M⁺ even-electron molecular ions, and the FAB mass spectra were similar to the corresponding electron ionization mass spectra. For the solid samples, it was found that the free radicals were quenched during the FAB process so that the mononitroxide and dinitroxide compounds produced [M + 2H]⁺ and [M + 3H]⁺ ions, respectively. Further experiments showed that the intensities and stabilities of [M + 2H]⁺ and [M + 3H]⁺ ions could be improved by addition of acids.