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1.
The observation of the Asp–His–Ser triad (Asp: aspartate, His: histidine, Ser: serine) triad both in mammalian and bacterial proteases suggests a special efficiency. A series of B3LYP/D95*(d,p) calculations on various [X–HβY]? dyads (as part of the [X–HβY–HαAc]? model triad, HAc: acetic acid) made from eight different anions X? and 15 different coupling elements HβY was done to analyze the molecular origin of this efficiency. The X? anion acts merely as an electron density donor independent of its chemical nature, and the evolutionary selection of Asp for the catalytic triad therefore seems to be caused by the pH of the triads environment. As the linking proton Hβ moves from Y? to X?, electron density is effectively moved from X? to Y? thereby increasing the proton affinity (PA) of the [X–HY]? dyad, which finally leads to the deprotonization of the HAc molecule. The degree to which the position of Hα controls the PA is dominatly determined by the coupling element HY. The model calculations indicate that 4‐methyl‐1H‐imidazole (HMim) is a very efficient coupling element, which suggest that the evolutionary convergence to the Asp–His–Ser is not only controlled by the ready availability of the imidazole motive in His but also by its high efficiency. © 2010 Wiley Periodicals, Inc. J Comput Chem, 2010  相似文献   

2.
Glutaric acid, a common short‐chain aliphatic dicarboxylic acid, was investigated in the negative ion mode by subjecting its [M–H]? ion to collision‐induced dissociation (CID) experiments in an infinity ion cyclotron resonance (ICR) cell coupled to a hexapole–quadrupole–hexapole ion guide. A 12 Tesla magnet was used for high‐resolution measurements. Two distinctive main pathways were observed in the MS/MS spectrum. The fragmentation pathways were also thoroughly investigated in a density functional theory (DFT) study involving a B3LYP/6‐311+G(2d,p)//B3LYP/6‐311+G(d,p) level of theory. Elimination of CO2 from the [M–H]? ion of the dicarboxylic acid takes place in a concerted mechanism, by which a 1,5 proton shift occurs from the intact carboxyl group to the methylene moiety located in the α position relative to the deprotonated carboxyl group. This concerted mechanism stabilizes the terminal negative charge and deprotonates the second carboxylic acid group. Water elimination from the [M–H]? ion does not take place by means of a simple proton removal from the α methylene group – and OH? release from the carboxylate group to abstract an additional α proton thus leading to the formation of a deprotonated ketene anion. In the case of this dicarboxylic acid, a new mechanism was found for water elimination, which differs from that known for aliphatic monocarboxylic acids. An intramolecular interaction between the deprotonated and the intact carboxyl groups plays a key role in making a new energetically favourable mechanism. The DFT study also reveals that a combined loss of CO2 and H2O in the form of H2CO3 is possible. Copyright © 2010 John Wiley & Sons, Ltd.  相似文献   

3.
刘鹏a  李曦a 潘牧b 《中国化学》2008,26(7):1215-1218
本文通过热化学方法设计了PDDA滴定质子交换膜,并研究了高分子的静电自组装过程。通过非线性拟合数据分析,求出了自组装过程的焓变( )和结合常数(K)。根据该反应过程中的热力学参数,可知自组装过程是“焓驱动”反应。热量的放出代表着能量的降低,有利于反应的发生;而自由度的减小不利于反应的发生。对于每个离子键的形成,单分子DDA的焓变超过了PDDA,这是因为小分子能够更加自由地结合到膜上,而高分子PDDA有一定的位阻效应。  相似文献   

4.
5.
A triphosphaazatriangulene (H3L) was synthesized through an intramolecular triple phospha‐Friedel–Crafts reaction. The H3L triangulene contains three phosphinate groups and an extended π‐conjugated framework, which enables the stimuli‐responsive reversible transformation of [Cu(HL)(DMSO)?(MeOH)]n, a 3D‐MOF that exhibits reversible sorption characteristics, into (H3L?0.5 [Cu2(OH)4?6 H2O] ?4 H2O), a 1D‐columnar assembled proton‐conducting material. The hydrophilic nature of the latter resulted in a proton conductivity of 5.5×10?3 S cm?1 at 95 % relative humidity and 60 °C.  相似文献   

6.
Reversible proton‐ and electron‐transfer steps are crucial for various chemical transformations. The electron‐reservoir behavior of redox non‐innocent ligands and the proton‐reservoir behavior of chemically non‐innocent ligands can be cooperatively utilized for substrate bond activation. Although site‐decoupled proton‐ and electron‐transfer steps are often found in enzymatic systems, generating model metal complexes with these properties remains challenging. To tackle this issue, we present herein complexes [(cod?H)M(μ‐L2?) M (cod?H)] (M=PtII, [ 1 ] or PdII, [ 2 ], cod=1,5‐cyclooctadiene, H2L=2,5‐di‐[2,6‐(diisopropyl)anilino]‐1,4‐benzoquinone), in which cod acts as a proton reservoir, and L2? as an electron reservoir. Protonation of [ 2 ] leads to an unusual tetranuclear complex. However, [ 1 ] can be stepwise reversibly protonated with up to two protons on the cod?H ligands, and the protonated forms can be stepwise reversibly reduced with up to two electrons on the L2? ligand. The doubly protonated form of [ 1 ] is also shown to react with OMe? leading to an activation of the cod ligands. The site‐decoupled proton and electron reservoir sources work in tandem in a three‐way cooperative process that results in the transfer of two electrons and two protons to a substrate leading to its double reduction and protonation. These results will possibly provide new insights into developing catalysts for multiple proton‐ and electron‐transfer reactions by using metal complexes of non‐innocent ligands.  相似文献   

7.
The kinetics and mechanism of substitution reaction of [Ru(CN)5H2O]3? anion with two naphthalene‐substituted ligands viz. Ln = nitroso‐R‐salt (NRS) and α‐nitroso‐β‐naphthol (αNβN) have been studied spectrophotometrically by monitoring an increase in absorbance at λmax = 525 nm corresponding to metal to ligand charge transfer (MLCT) transitions due to formation of substituted [Ru(CN)5L]n?3 as a function of pH, ionic strength, temperature, a wide range of ligands concentration, and [Ru(CN)5H2O3?] under pseudo‐first‐order conditions. The experimental observation suggests that [Ru(CN)5H2O]3? ion interacts with both ligands, which finally get converted into corresponding, [Ru(CN)5L]n?3 complexes as a final reaction product. The reaction is found to obey first‐order dependence each in [Ru(CN)5H2O3?] and [Ln]. The substituted products, viz. [Ru(CN)5L]n?3, in each case have strong MLCT transitions in visible region. The substitutional lability of [Ru(CN)5H2O]3? has been discussed in terms of electronic effect on the M? OH2 bond interactions. The kinetic observation suggests that the complexation reaction of [Ru(CN)5H2O]3? with both the ligands, i.e., NRS and αNβN, follows an ion pair dissociative mechanism. The thermal activation parameters ΔH and ΔS have been calculated using Eyring's equation and provided in support for the proposed mechanistic scheme. © 2010 Wiley Periodicals, Inc. Int J Chem Kinet 43: 21–30, 2011  相似文献   

8.
A kinetic study is reported for alkaline hydrolysis of X‐substituted phenyl diphenylphosphinates ( 1 a – i ). The Brønsted‐type plot for the reactions of 1 a – i is linear over 4.5 pKa units with βlg=?0.49, a typical βlg value for reactions which proceed through a concerted mechanism. The Hammett plots correlated with σo and σ? constants are linear but exhibit many scattered points, while the corresponding Yukawa–Tsuno plot results in excellent linear correlation with ρ=1.42 and r=0.35. The r value of 0.35 implies that leaving‐group departure is partially advanced at the rate‐determining step (RDS). A stepwise mechanism, in which departure of the leaving group from an addition intermediate occurs in the RDS, is excluded since the incoming HO? ion is much more basic and a poorer nucleofuge than the leaving aryloxide. A dissociative (DN + AN) mechanism is also ruled out on the basis of the small βlg value. As the substituent X in the leaving group changes from H to 4‐NO2 and 3,4‐(NO2)2, ΔH decreases from 11.3 kcal mol?1 to 9.7 and 8.7 kcal mol?1, respectively, while ΔS varies from ?22.6 cal mol?1 K?1 to ?21.4 and ?20.2 cal mol?1 K?1, respectively. Analysis of LFERs combined with the activation parameters assigns a concerted mechanism to the current alkaline hydrolysis of 1 a – i .  相似文献   

9.
A newly synthesized one‐dimensional (1D) hydrogen‐bonded (H‐bonded) rhodium(II)–η5‐semiquinone complex, [Cp*Rh(η5p‐HSQ‐Me4)]PF6 ([ 1 ]PF6; Cp*=1,2,3,4,5‐pentamethylcyclopentadienyl; HSQ=semiquinone) exhibits a paraelectric–antiferroelectric second‐order phase transition at 237.1 K. Neutron and X‐ray crystal structure analyses reveal that the H‐bonded proton is disordered over two sites in the room‐temperature (RT) phase. The phase transition would arise from this proton disorder together with rotation or libration of the Cp* ring and PF6? ion. The relative permittivity εb′ along the H‐bonded chains reaches relatively high values (ca., 130) in the RT phase. The temperature dependence of 13C CP/MAS NMR spectra demonstrates that the proton is dynamically disordered in the RT phase and that the proton exchange has already occurred in the low‐temperature (LT) phase. Rate constants for the proton exchange are estimated to be 10?4–10?6 s in the temperature range of 240–270 K. DFT calculations predict that the protonation/deprotonation of [ 1 ]+ leads to interesting hapticity changes of the semiquinone ligand accompanied by reduction/oxidation by the π‐bonded rhodium fragment, producing the stable η6‐hydroquinone complex, [Cp*Rh3+6p‐H2Q‐Me4)]2+ ([ 2 ]2+), and η4‐benzoquinone complex, [Cp*Rh+4p‐BQ‐Me4)] ([ 3 ]), respectively. Possible mechanisms leading to the dielectric response are discussed on the basis of the migration of the protonic solitons comprising of [ 2 ]2+ and [ 3 ], which would be generated in the H‐bonded chain.  相似文献   

10.
A process of ion‐pair formation in the system Cp2ZrMe2/methylaluminoxane (MAO) has been studied by means of density functional theory quantum‐chemical calculations for MAOs with different structures and reactive sites. An interaction of Cp2ZrMe2 with a MAO of the composition (AlMeO)6 results in the formation of a stable molecular complex of the type Al5Me6O5Al(Me)O–Zr(Me)Cp2 with an equilibrium distance r(Zr–O) of 2.15 Å. The interaction of Cp2ZrMe2 with “true” MAO of the composition (Al8Me12O6) proceeds with a tri‐coordinated aluminum atom in the active site (OAlMe2) and yields the strongly polarized molecular complex or the μ‐Me‐bridged contact ion pair ( d ) [Cp2(Me)Zr(μMe)Al≡MAO] with the distances r(Zr–μMe) = 2.38 Å and r(Al–μMe) = 2.28 Å. The following interaction of the μ‐Me contact ion pair ( d ) with AlMe3 results in a formation of the trimethylaluminum (TMA)‐separated ion pair ( e ) [Cp2Zr(μMe)2AlMe2]+–[MeMAO] with r[Zr–(MeMAO)] equal to 4.58 Å. The calculated composition and structure of ion pairs ( d ) and ( e ) are consistent with the 13C NMR data for the species detected in the Cp2ZrMe2/MAO system. An interaction of the TMA‐separated ion pair ( e ) with ethylene results in the substitution of AlMe3 by C2H4 in a cationic part of the ion pair ( e ), and the following ethylene insertion into the Zr–Me bond. This reaction leads to formation of ion pair ( f ) of the composition [Cp2ZrCH2CH2CH3]+–[Me‐MAO] named as the propyl‐separated ion pair. Ion pair ( f ) exhibits distance r[Zr–(MeMAO)] = 3.88 Å and strong Cγ‐agostic interaction of the propyl group with the Zr atom. We suppose this propyl‐separated ion pair ( f ) to be an active center for olefin polymerization.  相似文献   

11.
《Electroanalysis》2004,16(24):2065-2072
The interaction between Cu(II) and pectin extracted from citrus fruit was studied in KNO3 0.10 mol dm?3 at 25 °C and pH 5.5, using ion selective electrode potentiometry and voltammetry, namely differential pulse polarography and square‐wave voltammetry. Although many independent variables may affect Cu(II)‐polymer interactions such as charge density, polymer concentration and copper to polymer concentration ratio, a good fitting was observed for the model with ML and ML2 complex species, when M:L total concentration (mol dm?3) ratio varies from 0.2 to 2.7 and the ligand concentration is in the range (0.2 to 1) g dm?3, i.e., (0.4 to 2)×10?3 mol COO? dm?3. The complex parameters found in these conditions were log βCuL=3.5±0.1 and log βCuL2= 8.0±0.2. For lower total ligand and total metal ion concentrations, used in voltammetry, the interaction Cu(II)‐pectin is affected by a cooperative mode (increase of metal ion‐ligand affinity) when the total metal ion concentration increases and by an anti‐cooperative mode when the total ligand concentration increases, possibly due to different conformations of the polymer.  相似文献   

12.
A pure organic single crystal, [H2dabco] · [PA]2 ([H2dabco]2+ = diprotonated 1,4‐diazabicyclo‐[2.2.2]octane, PA = pyruvic acid), was synthesized and its dielectric property was studied. [H2dabco] · [PA]2 owns a distinctive architecture composed of discrete hydrogen‐bonded trimeric units, of which one [H2dabco]2+ cation bridged by two PA anions through N–H ··· O hydrogen bonding. The switchable property around 348 K was revealed by crystal structure studies between low and high dielectric states. In the high temperature phase, the [H2dabco]2+ cation presents itself in a rotationally disordered state and lies at the symmetric center of the trimer. In the room temperature phase, it is frozen in an ordered state and shifts toward a PA anion at one end along the hydrogen bond.  相似文献   

13.
Benzodithiazolium Chlorooxomolybdate(V): Preparation and Crystal Structure of (C6H4NS2)[MoOCl4] and (C6H4NS2)[MoOCl4·H2O] Red benzo‐1,3,2‐dithiazolium‐chlorooxomolybdate(V) (C6H4NS2)[MoOCl4] ( 1 ) was obtained by the reaction of benzo‐1,3,2‐dithiazoliumchloride and molybdenum(V)chloride oxide in dichlormethane under solvothermal conditions at 70 °C. In the presence of small amounts of concentrated hydrochloric acid the yellow compound (C6H4NS2)[MoOCl4·H2O] ( 2 ) is formed under analogue conditions. Both crystal structures ( 1 : monoclinic, C2/c, a = 799.2(1), b = 2091.5(2), c = 791.5(1) pm, β = 102.2(1)°, Z = 4; 2 : monoclinic, Cc, a = 953.7(1), b = 2468.9(3), c = 608.1(1) pm, β = 112.5(1)°, Z = 4) contain the planar benzo‐1,3,2‐dithiazolium ion. Within the structure of 1 the molybdenum atoms in the [MoOCl4]? ions are coordinated in a square pyramidal fashion with an oxygen atom in apical position and the basal plane formed by chlorine atoms. The nitrogen atom of the cation, which bears a partial negativ charge, expands the coordination to a distorted octahedron. The structure therefore is made up of ionic pairs {(C6H4NS2)+ [MoOCl4]?} with a Mo–N distance of 266 pm. 1 is paramagnetic with a magnetic moment of 1.7 B.M. corresponding to one unpaired electron per formula unit. In the structure of 2 the coordination of the [MoOCl4]? ion is expanded by the oxygen atom of a coordinating water molecule. The structure is dominated by hydrogen bonds between the oxygen atoms of the [MoOCl4·H2O]? ions which cause the concatenation of the anions to infinite chains.  相似文献   

14.
In an investigation into the proton conductivity of crystallized water clusters confined within low‐dimensional nanoporous materials, we have found that water‐stable nanoporous crystals are formed by complementary hydrogen bonding between [CoIII(H2bim)3]3+ (H2bim: 2,2′‐biimidazole) and TATC3? (1,3,5‐ tricarboxyl‐2,4,6‐triazinate); the O atoms in the ?COO? groups of TATC3? in the porous outer wall are strongly hydrogen bonded with H2O, forming two types of WMCs (water molecular clusters): a spirocyclic tetramer chain (SCTC) that forms infinite open 1D channels, and an isolated cyclic tetramer (ICT) present in the void space. The ICT is constructed from four H2O molecules as a novel C2‐type WMC, which are hydrogen bonded with four‐, three‐, and two‐coordination spheres, respectively. The largest structural fluctuation is observed at elevated temperatures from the two‐coordinated H2O molecules, which begin to rapidly and isotropically fluctuate on heating. This behavior can be rationalized by a simple model for the elucidation of pre‐melting phenomena, similar to those in ice surfaces as the temperature increases. Moreover, high proton conductivity of SCTCs (ca. 10?5 S cm?1 at 300 K with an activation energy of 0.30 eV) through a proton‐hole mechanism was observed for pellet samples using the alternating impedance method. The proton conductivity exhibits a slight enhancement of about 0.1×10?5 S cm?1 at 274 K due to a structural transition upon approaching this temperature that elongates the unit cell along the b‐axis. The proton‐transfer route can be predicted in WMCs, as O(4) of an H2O molecule at the center of an SCTC shows a motion that rotates the dipole in the b‐axis direction, but not the c‐axis; the thermal ellipsoids of O(4) based on anisotropic temperature factors obtained by X‐ray crystallography reflect a structural fluctuation along the b‐axis direction induced by [CoIII(H2bim)3]3+.  相似文献   

15.
The energy dependence of the fragmentation of a selection of ester enolate ions has been studied by variable, low-energy collision-induced dissociation experiments in the quadrupole collision cell of a hybrid BEQQ mass spectrometer. The dominant fragmentation reactions observed are where ΔH1 ? ΔH2=PA([RCCO]?) ? PA([?O]?) (PA=proton affinity). The anion of lowest proton affinity is formed preferentially at low internal energies with the yield of the anion of higher proton affinity increasing with increasing internal energy. The [CH3OCOCOCH2]? anion derived from methyl pyruvate forms [CH3OCO]? by reaction (2); this anion readily fragments to [CH3G]?+ CO consistent with a structure represented by a dipole-stabilized cluster of [CH3O]? and CO. Comparison of the 8-keV with the 50-eV collision-induced dissociation mass spectra indicated that the average internal energy of the fragmenting ions is considerably lower in the high-energy collisional experiments than it is in the low-energy collisional experiments.  相似文献   

16.
Eu3+, Dy3+, and Yb3+ complexes of the dota‐derived tetramide N,N′,N″,N′′′‐[1,4,7,10‐tetraazacyclododecane‐1,4,7,10‐tetrayltetrakis(1‐oxoethane‐2,1‐diyl)]tetrakis[glycine] (H4dotagl) are potential CEST contrast agents in MRI. In the [Ln(dotagl)] complexes, the Ln3+ ion is in the cage formed by the four ring N‐atoms and the amide O‐atom donor atoms, and a H2O molecule occupies the ninth coordination site. The stability constants of the [Ln(dotagl)] complexes are ca. 10 orders of magnitude lower than those of the [Ln(dota)] analogues (H4dota=1,4,7,10‐tetraazacyclododecane‐1,4,7,10‐tetraacetic acid). The free carboxylate groups in [Ln(dotagl)] are protonated in the pH range 1–5, resulting in mono‐, di‐, tri‐, and tetraprotonated species. Complexes with divalent metals (Mg2+, Ca2+, and Cu2+) are also of relatively low stability. At pH>8, Cu2+ forms a hydroxo complex; however, the amide H‐atom(s) does not dissociate due to the absence of anchor N‐atom(s), which is the result of the rigid structure of the ring. The relaxivities of [Gd(dotagl)] decrease from 10 to 25°, then increase between 30–50°. This unusual trend is interpreted with the low H2O‐exchange rate. The [Ln(dotagl)] complexes form slowly, via the equilibrium formation of a monoprotonated intermediate, which deprotonates and rearranges to the product in a slow, OH?‐catalyzed reaction. The formation rates are lower than those for the corresponding Ln(dota) complexes. The dissociation rate of [Eu(dotagl)] is directly proportional to [H+] (0.1–1.0M HClO4); the proton‐assisted dissociation rate is lower for [Eu(H4dotagl)] (k1=8.1?10?6 M ?1 s?1) than for [Eu(dota)] (k1=1.4?10?5 M ?1 s?1).  相似文献   

17.
The proton‐bound dicarboxylate motif, RCOO??H+??OOCR, is a prevalent chemical configuration found in many condensed‐phase systems. The proton‐bound formate dimer HCOO??H+??OOCH was studied utilizing cold‐ion IR action spectroscopy in the range 400–1800 cm?1. The spectrum obtained at ca. 0.4 K of ions captured in He nanodroplets was compared to that measured at ca. 10 K by photodissociation of Ar‐ion complexes. Similar band patterns are obtained by the two techniques that are consistent with calculations for a C2 symmetry structure with a proton shared equally between the two formate moieties. Isotopic substitution experiments point to the nominal parallel stretch of the bridging proton appearing as a sharp, dominant feature near 600 cm?1. Multidimensional anharmonic calculations reveal that the bridging proton motion is strongly coupled to the flanking ?COO? framework, an effect that is in line with the expected change in ?C=O bond rehybridization upon protonation.  相似文献   

18.
Pyrazolo[3,4‐b]quinoline derivatives are reported to be highly efficient organic fluorescent materials suitable for applications in light‐emitting devices. Although their fluorescence remains stable in organic solvents or in aqueous solution even in the presence of H2O, halide salts (LiCl), alkali (NaOH) and weak acid (acetic acid), it suffers an efficient quenching process in the presence of protic acid (HCl) in aqueous or ethanolic solution. This quenching process is accompanied by a change in the UV spectrum, but it is reversible and can be fully recovered. Both steady‐state and transient fluorescence spectra of 1‐phenyl‐3,4‐dimethyl‐1H‐pyrazolo‐[3,4‐b]quinoline (PAQ5) during quenching are measured and analyzed. It is found that a combined dynamic and static quenching mechanism is responsible for the quenching processes. The ground‐state proton‐transfer complex [PAQ5 ??? H+] is responsible for static quenching. It changes linearly with proton concentration [H+] with a bimolecular association constant KS=1.95 M ?1 controlled by the equilibrium dissociation of HCl in ethanol. A dynamic quenching constant KD=22.4 M ?1 is obtained by fitting to the Stern–Volmer equation, with a bimolecular dynamic quenching rate constant kd=1.03×109 s?1 M ?1 under ambient conditions. A change in electron distribution is simulated and explains the experiment results.  相似文献   

19.
Ionic liquids have become commonplace materials found in research laboratories the world over, and are increasingly utilised in studies featuring water as co‐solvent. It is reported herein that proton activities, aH+, originating from auto‐protolysis of H2O molecules, are significantly altered in mixtures with common ionic liquids comprised of Cl?, [HSO4]?, [CH3SO4]?, [CH3COO]?, [BF4]?, relative to pure water. paH+ values, recorded in partially aqueous media as ?log(aH+), are observed over a wide range (~0–13) as a result of hydrolysis (or acid dissociation) of liquid salt ions to their associated parent molecules (or conjugate bases). Brønsted–Lowry acid–base character of ionic liquid ions observed is rooted in equilibria known to govern the highly developed aqueous chemistry of classical organic and inorganic salts, as their well‐known aqueous pKs dictate. Classical salt behaviour observed for both protic and aprotic ions in the presence of water suggests appropriate attention need be given to relevant chemical systems in order to exploit, or avoid, the nature of the medium formed.  相似文献   

20.
A long wavelength emission fluorescent (612 nm) chemosensor with high selectivity for H2PO4? ions was designed and synthesized according to the excited state intramolecular proton transfer (ESIPT). The sensor can exist in two tautomeric forms ('keto' and 'enol') in the presence of Fe3+ ion, Fe3+ may bind with the 'keto' form of the sensor. Furthermore, the in situ generated GY‐Fe3+ ensemble could recover the quenched fluorescence upon the addition of H2PO4? anion resulting in an off‐on‐type sensing with a detection limit of micromolar range in the same medium, and other anions, including F?, Cl?, Br?, I?, AcO?, HSO4?, ClO4? and CN? had nearly no influence on the probing behavior. The test strips based on 2‐[2‐hydroxy‐4‐(diethylamino) phenyl]‐1H‐imidazo[4,5‐b]phenazine and Fe3+ metal complex ( GY‐Fe3+ ) were fabricated, which could act as convenient and efficient H2PO4? test kits.  相似文献   

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