DFT Study for a Series of Less-Symmetrical Crown Ethers and Their Complexes with Alkali Metal Cations

A series of ring‐contracted (14‐crown‐5, 17‐crown‐6) and ring‐enlarged (16‐crown‐5, 17‐crown‐5, 19‐crown‐6, 20‐crown‐6) crown ethers and their complexes with alkali‐metal cations Na⁺ and K⁺ had been explored using density functional theory (DFT) at B3LYP/6‐31G* level in order to reveal the effects of the methylene‐chain length in a crown ether. The nucleophilicity of all crown ethers had been investigated by the Fukui functions. The quantum chemistry parameters, such as the energy gap (ΔE), the highest occupied molecular orbital energy (E_HOMO) and the lowest unoccupied molecular orbital energy (E_LUMO) for less‐symmetrical crown ethers and symmetrical frameworks (15‐crown‐5, 18‐crown‐6) had been calculated. In addition, the thermodynamic energies of complexation reactions had also been studied. The results of the DFT calculations show that the methylene‐chain length plays an important role in determining the structure characters of the crown ethers and also strongly influences the properties of the ethers. Some of the calculated results are in a good agreement with the experimental values.     

Strukturen der Alkalimetallsalze aromatischer,heterocyclischer Amide: Synthese und Struktur von Kronenether‐Addukten der Alkalimetall‐indolide

Structures of Alkali Metal Salts of Aromatic, Heterocyclic Amides: Synthesis and Structure of Crown Ether Adducts of the Alkali Metal Indolides The synthesis of five alkali metal indolide crown ether complexes is reported. Lithium‐indolide(12‐crown‐4) ( 1 ) was synthezised from butyllithium, indole, and 12‐crown‐4; sodium‐indolide(15‐crown‐5) ( 2 ) from sodium metal, indole, and 15‐crown‐5; potassium‐indolide(18‐crown‐6) ( 3 ) from potassium hydride, indole, and 18‐crown‐6. Rubidium‐ and cesium‐indolide(18‐crown‐6) ( 4 , 5 ) were made from Rb‐ and Cs‐hexamethyldisilazide, indole, and 18‐crown‐6. The structures of 2 , 4 , and 5 could be determined by X‐ray diffraction. The complexes 2 and 4 are mononuclear, the indolide anion shows an η¹(N)‐coordination to the metal cation. Complex 5 is dinuclear with a central [Cs—N—]₂‐ring.     

Cobalt（Ⅱ） Salen Complex with Two Aza-crown Pendants and Its Analogues as Synthetic Oxygen Carriers

Salen with two aza‐crown ether pendants H₂L¹ and its analogues H₂L^2‐H₂L⁴ were successfully synthesized starting from benzo‐10‐aza‐15crown‐5 (BN15C5) or morpholine. Their structures were characterized by IR, MS, ¹H NMR and elemental analysis, and were confirmed by X‐ray diffraction analysis of H₂L¹. Moreover, the saturated oxygen uptake of their cobalt(II) complexes CoL^1‐CoL⁴ in diethyleneglycol dimethyl ether was determined at different temperature. The oxygenation contants (K_O2 ) and thermodynamic parameters (ΔH° and ΔS°) were calculated. The modulation of O₂‐binding capabilities by pendant substituents were investigated as compared with the parent Schiff base complex CoL⁵ (CoSalen). The results indicate that the dioxygen affinities of CoL have been much more enhanced by aza‐crown pendants than that by morpholino pendants, and the O₂‐binding capabilities of CoL¹ and CoL² with aza‐crown pendants would also be enhanced by adding alkali metal cations.     

Kinetic Study of the Oxidation of Catechols in the Presence of Some Aza‐crown Ethers by Digital Simulation of Cyclic Voltammograms

The electrochemical oxidation of catechols ( 1 ) have been studied in the presence of diaza‐18‐crown‐6 (DA18C6) ( 3a ), diaza‐15‐crown‐5 (DA15C5) ( 3b ), and aza‐15‐crown‐5 (A15C5) ( 3c ) as nucleophiles in aqueous solution, by means of cyclic voltammetry and controlled‐potential coulometry. The results indicate the participation of electrochemically generated o‐benzoquinones ( 2 ) in Michael‐type reaction with aza‐crown ethers ( 3 ) to form the corresponding new o‐benzoquinone‐aza‐crown ether adducts ( 5 ). Based on ECE mechanism, the observed homogeneous rate constants (k_obs) of the reaction of o‐bezoquinones ( 2 ) with aza‐crown ethers ( 3 ) were estimated by comparing the experimental cyclic voltammograms with the digital simulated results. The calculated observed homogeneous rate constants (k_obs) was found to vary in the order DA18C6>DA15C5>A15C5.     

Synthesis and characterization of crown ether–containing N‐phosphorylated thioureas RC(S)NHP(O)(OiPr)2 (R = 1‐aza‐15‐crown‐5, 1‐aza‐12‐crown‐4) and their Co(II) and Ni(II) complexes

The reaction of the lithium salts of N‐phosphorylated thioureas RC(S)NHP(O)(OiPr)₂ (R = 1‐aza‐15‐crown‐5, HL ^I ; 1‐aza‐12‐crown‐4, HL ^II ) with Co(II) or Ni(II) leads to the chelate complexes [ ML ^I,II ₂ ]. The metal center is found in a tetrahedral ([ CoL ^I,II ₂ ]) or square planar ([ NiL ^I,II ₂ ]) O₂S₂ environment formed by the CS sulfur atoms and the PO oxygen atoms of two deprotonated ligands L . The molecular structure of [ CoL ^I ₂ ] was elucidated by X‐ray diffraction and the extraction properties of HL ^I,II and [ ML ^I,II ₂ ] toward alkali metal and ammonium picrates were investigated. © 2010 Wiley Periodicals, Inc. Heteroatom Chem 21:486–491, 2010; View this article online at wileyonlinelibrary.com . DOI 10.1002/hc.20637     

1,14‐Dioxa‐5,10‐di­aza‐2,3:12,13‐dibenzo­cyclo­octadeca‐2,12‐diene monohydrate

The title compound, C₂₂H₃₀N₂O₂·H₂O, is an 18‐membered di­aza‐crown ether ligand containing two ether O and two aza N atoms. In the macrocyclic ring, the mean N⋯O distance is 4.526 (4) Å. The macrocyclic inner‐hole size, estimated as twice the mean distance of the donor atoms from their centroid, is ∼2.29 Å.     

Complexing properties of 3′,5′‐disubstituted‐4′‐hydroxybenzyl armed monoaza‐12‐crown‐4 and armed monoaza‐15‐crown‐5 ethers and crystal structures of the alkali metal ion complexes

A series of monoaza‐15‐crown‐5 ethers (2b‐2h) having 4′‐hydroxy‐3′,5′‐disubstituted benzyl groups have been prepared by the Mannich reaction of 2,6‐disubstituted phenols with the corresponding N‐methoxymethylmonoaza‐crown ethers. Competitive transport through a chloroform membrane by 12‐crown‐4 derivatives (lithium, potassium and cesium) and 15‐crown‐5 derivatives (sodium, potassium and cesium) were measured under basic‐source phase and acidic‐receiving phase conditions. All ligands transported size‐matched alkali‐metal cations. Ligands 1h and 2h with two fluorine atoms in the side arm gave higher metal ion transport rates than those of dimethyl‐ (1a and 2a), diisopropyl‐ (1b and 2b), and butylmethyl‐ (1d and 2d) derivatives. X‐ray crystal structures of six alkali metal complexes with monoaza‐12‐crown‐4‐derivatives ( 1b‐LiSCN, 1b‐KSCN, 1c‐NaSCN, 1d‐LiSCN, 1f‐RbSCN and 1h‐LiSCN ) and three alkali metal complexes with 15‐crown‐5 derivatives ( 2b‐KSCN, 2c‐KSCN , and 2e‐KSCN ) along with crystal structures of some new ligands (1b, 1c, 1d, 1f, and 2c) are also reported. These X‐ray analyses indicate that the crystal structures of the alkali metal ion complexes of these new armed‐crown ethers changed depending on the substituents at the 3′‐ and 5′‐positions of the appended hydroxybenzyl arms.     

Complexation of Alkali Triflates by Crown Ethers: Synthesis and Crystal Structure of [Na(12‐crown‐4)2][SO3CF3], [Na(15‐crown‐5)][SO3CF3], [Rb(18‐crown‐6)][SO3CF3], and [Cs(18‐crown‐6)][SO3CF3]

Complexes of trifluoromethanesulfonates (triflates) with alkali metals Na, Rb, Cs have been prepared in the presence of various macrocyclic polyether crowns [(12‐crown‐4), (15‐crown‐5) and (18‐crown‐6)]. Depending on the combination of alkali ion with crown, the complexes include separated ion pairs [Na(12‐crown‐4)₂] [SO₃CF₃] ( 1 ) and contact ion pairs [Na(15‐crown‐5)] [SO₃CF₃] ( 2 ), [Rb(18‐crown‐6)] [SO₃CF₃] ( 3 ), and [Cs(18‐crown‐6)] [SO₃CF₃] ( 4 ), in which the triflate acts as a bidentate ligand. It is shown that the choice of crown ether is of paramount importance in determining the solid‐state structural outcome. The complex resulting from the pairing of crown ether ( 1 ) develops, when the crown ether is too small in relation to the alkali ion radius. When the cavity size of the crown ether is matched with the alkali ion radius, simple monomeric structures are identified in 2 , 3 and 4 . The title compounds crystallize in the monoclinic crystal system: 1 : space group P2/c with a = 9.942(3), b = 11.014(2), c = 10.801(3) Å, β = 97.30(2)°, V = 1173.1(4) ų, Z = 2, R1 = 0.0812, wR2 = 0.1133: 2 : space group P2₁/m with a = 7.949(2), b = 12.063(3), c = 9.094(2) Å, β = 105.98(2)°, V = 838.3(4) ų, Z = 2, R1 = 0.0869, wR2 = 0.1035: 3 : space group P2₁/c with a = 12.847(5), b = 8.448(2), c = 22.272(6) Å, β = 122.90(3)°, V = 2029.5(1) ų, Z = 4, R1 = 0.0684, wR2 = 0.1044: 4 : space group P2₁/n with a = 12.871(3), b = 8.359(1), c = 19.019(4) Å, β = 92.61(2)°, V = 2044.2(6) ų, Z = 4, R1 = 0.0621, wR2 = 0.0979.     

Synthesis,properties and X‐ray structure of 5‐azido‐2‐methoxy‐1,3‐xylyl‐18‐crown‐5

5‐Azido‐2‐methoxy‐1,3‐xylyl‐18‐crown‐5 has been prepared by reacting p‐toluenesulfonyl azide with the carbanion generated from the reaction of 5‐bromo‐2‐methoxy‐1,3‐xylyl‐18‐crown‐5 with n‐butyl lithium. The asymmetric N₃ stretch of this product has been observed as a single band at 2110 cm^?1 in dichloromethane solution. Addition of solid NaSCN, KSCN and CsSCN shifts this band to 2115, 2113 and 2112 cm^?1, respectively. Computational studies of this azide at the B3LYP‐6‐31G* level in the presence and absence of Na⁺ predicted these bands to be at 2173 cm^?1 and 2184 cm^?1. For the salt‐containing solutions, additional bands were observed at 2066 cm^?1, 2056 cm^?1 and 2055 cm^?1, respectively, which are in the range expected for CN stretches. The X‐ray structure of this azide has been determined. The terminal and internal N? N bond lengths were found to be 1.127(2) and 1.245(2) Δ, respectively, which is the usual pattern for aromatic azides. The crown ether is looped over the face of the aromatic ring resulting in an angle of 38.94° between the plane defined by the aromatic ring and that defined by the five ring oxygen atoms. In addition, the CH₃ group is rotated out of the plane of the phenyl ring with C1‐C18‐O181‐C182 and C17‐C18‐O181‐C182 dihedral angles of 93.81(14)° and ‐90.54(14)°, respectively.     

Density functional theory study of a molecular allosteric switch for 2,2′‐bipyridyl‐3,3′‐15‐crown‐5

A classical model of “molecular machine,” which acts as an ON–OFF switch for 2,2′‐bipyridyl‐3,3′‐15‐crown‐5 ( L ), has been theoretically studied. It is highly important to understand the mechanism of this switch. The alkali‐metal cations (Na⁺ and K⁺) and W(CO)₄ fragment are introduced to coordinate with the different active sites of L , respectively. The density functional theory (DFT) method is used for understanding the stereochemical structural natures and thermodynamic properties of all the target molecules at B3LYP/6‐31G(d) and SDD (Stuttgart–Dresden) level, together with the corresponding effective core potential (ECP) for tungsten (W). The fully optimized geometries have been performed with real frequencies, which indicate the minima states. The nucleophilicity of L has been investigated by the Fukui functions. The natural bond orbital analysis is used to study the intermolecular charge‐transfer interactions and explore the origin of the internal forces of the molecular switch. In addition, the binding energies, enthalpies, Gibbs free energies, and the cation exchange energies have been studied for L , W(CO)₄ L , and their corresponding complexes. The properties of the complexes displayed by in presence or absence of the W(CO)₄ fragment are also analyzed. The calculated results of allosterism displayed by L are in a good agreement with the experimental results. © 2010 Wiley Periodicals, Inc. J Comput Chem, 2011     

Syntheses,crystal structures,and metal ion complexation studies of novel diaza‐18‐crown‐6 ligands containing aromatic thiol‐derived side arms

The Mannich aminomethylation reaction of aromatic thiols has been used to produce diaza‐18‐crown‐6 ligands containing thiol‐derived side arms. Thiophenols were attached to the azacrown through N‐CH₂‐S linkages even in the presence of hydroxy or acetamido groups. Heteroaromatic thiols containing N=C‐SH (or NH‐C=S) structural fragments were attached to diaza‐18‐crown‐6 by N‐CH₂‐N linkages with the thiol becoming a thione function. X‐ray crystal structural analyses show the N‐CH₂‐S and N‐CH₂‐N linkages for some of the new macrocyclic compounds. Interactions of four of the new diaza‐18‐crown‐6 ligands with Na⁺, K⁺, Ba²⁺, Ag⁺, Zn²⁺, Cd²⁺, Ni²⁺, and Cu²⁺ were evaluated by calorimetric titration at 25° in methanol. The results show that these ligands form stable complexes with many of the metal ions studied.     

A New Water‐Soluble Phosphorus‐Dipyrromethene and Phosphorus‐Azadipyrromethene Dye: PODIPY/aza‐PODIPY

PODIPY and aza‐PODIPY have been successfully prepared by the treatment of dipyrromethene and azadipyrromethene with POCl₃ in the presence of Et₃N. The new PODIPY and aza‐PODIPY dyes are found to have photophysical properties. PODIPY and aza‐PODIPY are water‐soluble, and aza‐PODIPY is suited for labeling living Hep‐2 cells for imaging assays in the near‐infrared region. Molecular orbital calculations show that the increase in the HOMO–LUMO band gap for the lowest energy absorption bands is observed in the new phosphorus‐containing aza‐PODIPY, and the HOMO and LUMO energies of aza‐PODIPY are found to be higher than those of aza‐BODIPY.     

Alkaliisocyanacetate. Synthese und Struktur von [K(18‐Krone‐6)](O2CCH2NC)

Alkali‐isocyanoacetates. Synthesis and Structure of [K(18‐crown‐6)](O₂CCH₂NC) The alkali isocyanoacetates M⁺[O₂CCH₂NC]^? (M = Li,Na,K,Cs) ( 1a ‐ d ) are synthesized by reaction of ethyl isocyanoacetate with the respective alkali hydroxides in ethanol and characterized by IR, NMR (¹H, ¹³C), and mass spectrometry (FAB). In alcoholic solution as well as in the gas phase ion pairs and higher aggregated species are observed. In contrast, [K(18‐crown‐6)][O₂CCH₂NC] ( 2 ) which is obtained from 1c and 18‐crown‐6, turns out to be a 1:1 electrolyte in solution (acetone); in the solid, the isocyanoacetate anion binds to K⁺ via the two carboxylate oxygen atoms resulting in an O₈‐coordinated metal atom.     

GIAO/DFT studies on 1,2,4‐triazole‐5‐thiones and their propargyl derivatives

Density functional theory (DFT)/Becke–Lee–Yang–Parr (B3LYP) and gauge‐including atomic orbital (GIAO) calculations were performed on a number of 1,2,4‐triazole derivatives, and the optimized structural parameters were employed to ascertain the nature of their predominant tautomers. ¹³C and ¹⁵N NMR chemical shifts of 3‐substituted 1,2,4‐triazole‐5‐thiones and their propargylated derivatives were calculated via GIAO/DFT approach at the B3LYP level of theory with geometry optimization using a 6‐311++G** basis set. A good agreement between theoretical and experimental ¹³C and ¹⁵N NMR chemical shifts could be found for the systems investigated. The data generated were useful in predicting ¹⁵N chemical shifts of all the nitrogen atoms of the triazole ring, some of which could not be obtained in solution state ¹⁵N HMBC/HSQC NMR measurements. The energy profile computed for the dipropargylated derivatives was found to follow the product distribution profile of regioisomers formed during propargylation of 1,2,4‐triazole thiones. Copyright © 2013 John Wiley & Sons, Ltd.     

Dinuclear Complexes of Copper(I) with Crown Ether‐containing N‐Thiophosphorylated Bis‐thioureas and 2,2′‐Bipyridine or 1,10‐Phenanthroline: Synthesis,Characterization, and Picrate Extraction Properties

Reaction of O,O′‐diisopropylthiophosphoric acid isothiocyanate (iPrO)₂P(S)NCS with 1,10‐diaza‐18‐crown‐6, 1,7‐diaza‐18‐crown‐6, or 1,7‐diaza‐15‐crown‐5 leads to the N‐thiophosphorylated bis‐thioureas N,N′‐bis[C(S)NHP(S)(OiPr)₂]‐1,10‐diaza‐18‐crown‐6 ( H₂L^I ), N,N′‐bis[C(S)NHP(S)(OiPr)₂]‐1,7‐diaza‐18‐crown‐6 ( H₂L^II ) and N,N′‐bis[C(S)NHP(S)(OiPr)₂]‐1,7‐diaza‐15‐crown‐5 ( H₂L^III ). Reaction of the potassium salts of H₂L^I–III with a mixture of CuI and 2,2′‐bipyridine ( bpy ) or 1,10‐phenanthroline ( phen ) in aqueous EtOH/CH₂Cl₂ leads to the dinuclear complexes [Cu₂(bpy)₂L^I–III] and [Cu₂(phen)₂L^I–III] . The structures of these compounds were investigated by ¹H, ³¹P{¹H} NMR spectroscopy, and elemental analysis. The crystal structures of H₂L^I and [Cu₂(phen)₂L^I] were determined by single‐crystal X‐ray diffraction. Extraction capacities of the obtained compounds in comparison to the related compounds 1,10‐diaza‐18‐crown‐6, N,N′‐bis[C(=CMe₂)CH₂P(O)(OiPr)₂]‐1,10‐diaza‐18‐crown‐6, N,N′‐bis[C(S)NHP(O)(OiPr)₂]‐1,10‐diaza‐18‐crown‐6 towards the picrate salts LiPic, NaPic, KPic. and NH₄Pic were also studied.     

Design and Synthesis of Calixarene‐Based Bis‐alkynyl‐Bridged Dinuclear AuI Isonitrile Complexes as Luminescent Ion Probes by the Modulation of Au⋅⋅⋅Au Interactions

Two calixarene‐based bis‐alkynyl‐bridged Au^I isonitrile complexes with two different crown ether pendants, [{calix[4]arene‐(OCH₂CONH‐C₆H₄C≡C)₂}{Au(CNR)}₂] (R=benzo[15]crown‐5 ( 1 ); R=benzo[18]crown‐6 ( 2 )), together with their related crown‐free analogue 3 (R=C₆H₃(OMe)₂‐3,4) and a mononuclear gold(I) complex 4 with benzo[15]crown‐5 pendant, have been designed and synthesized, and their photophysical properties have been studied. The X‐ray structure of the ligand, calix[4]arene‐(OCH₂CONH‐C₆H₄C?CH)₂ has been determined. The cation‐binding properties of these complexes with various metal ions have been studied using UV/Vis, emission, ¹H NMR, and ESI‐MS techniques, and DFT calculations. A new low‐energy emission band associated with Au???Au interaction could be switched on upon formation of the metal ion‐bound adduct in a sandwich fashion.     

Unusual centrosymmetric structure of [M(18‐crown‐6)]+ (M = Rb,Cs and NH4) complexes stabilized in an environment of hexachloridoantimonate(V) anions

In (1,4,7,10,13,16‐hexaoxacyclooctadecane)rubidium hexachloridoantimonate(V), [Rb(C₁₂H₂₄O₆)][SbCl₆], (1), and its isomorphous caesium {(1,4,7,10,13,16‐hexaoxacyclooctadecane)caesium hexachloridoantimonate(V), [Cs(C₁₂H₂₄O₆)][SbCl₆]}, (2), and ammonium {ammonium hexachloridoantimonate(V)–1,4,7,10,13,16‐hexaoxacyclooctadecane (1/1), (NH₄)[SbCl₆]·C₁₂H₂₄O₆}, (3), analogues, the hexachloridoantimonate(V) anions and 18‐crown‐6 molecules reside across axes passing through the Sb atoms and the centroids of the 18‐crown‐6 groups, both of which coincide with centres of inversion. The Rb⁺ [in (1)], Cs⁺ [in (2)] and NH₄⁺ [in (3)] cations are situated inside the cavity of the 18‐crown‐6 ring; they are situated on axes and are equally disordered about centres of inversion, deviating from the centroid of the 18‐crown‐6 molecule by 0.4808 (13), 0.9344 (7) and 0.515 (8) Å, respectively. Interaction of the ammonium cation and the 18‐crown‐6 group is supported by three equivalent hydrogen bonds [N...O = 2.928 (3) Å and N—H...O = 162°]. The centrosymmetric structure of [Cs(18‐crown‐6)]⁺, with the large Cs⁺ cation approaching the centre of the ligand cavity, is unprecedented and accompanied by unusually short Cs—O bonds [2.939 (2) and 3.091 (2) Å]. For all three compounds, the [M(18‐crown‐6)]⁺ cations and [SbCl₆]⁻ anions afford linear stacks along the c axis, with the cationic complexes embedded between pairs of inversion‐related anions.     

Potassium di­cyano­argentate(I) 1,4,7,10,13,16‐hexaoxa­cyclo­octadecane

The crystal structure of the title compound, K[Ag(CN)₂]·C₁₂H₂₄O₆, conventionally denoted K(18‐crown‐6)Ag(CN)₂, where 18‐crown‐6 is 1,4,7,10,13,16‐hexa­oxa­cyclo­octa­decane, is characterized by closely packed linear chains formed by the coordination of the nitrile N atoms of the [Ag(CN)₂]⁻ anions to the K⁺ cations. The K atoms lie on centers of inversion and are additionally bound to the six O atoms of the crown ether.     

Ag+ selection by aza‐18‐crown‐6 ethers N‐Substituted on heterocyclic aromatics

Substitution on the nitrogen atom, where necessary by high‐pressure S_NAr reactions, of aza‐18‐crown‐6 ethers linked to heterocyclic aromatics has extended the number of potential host compounds for Ag⁺. The complexation of Ag⁺ by the new compounds has been evaluated by liquid membrane ion transport and ion extraction experiments. The nature of the binding sites of these new host compounds for Ag⁺ has been assessed, in DMF/D₂O (4/1), by ¹³C nmr titration experiments with AgClO₄.     

p‐Nitrophenyl Picolinate Cleavage by Unsymmetrical Bis‐Schiff Base Manganese(III) and Cobalt(II) Complexes with Aza‐Crown Ether or Morpholino Pendants

The unsymmetrical bis‐Schiff base manganese(III) and cobalt(II) complexes with either benzo‐10‐aza‐crown ether pendants (MnL¹Cl, MnL²Cl) or morpholino pendant (MnL³Cl, CoL³) have been employed as models for hydrolase by studying the kinetics of their hydrolysis reactions with p‐nitrophenyl picolinate (PNPP). A kinetic model of PNPP cleavage catalyzed by these complexes is proposed. The effects of complex structures and reaction temperature on the rate of PNPP hydrolysis have been examined. All four complexes exhibit high catalytic activity and the rate increases with pH under 25°C. The complexes of ligands containing a crown ether group exhibit higher catalytic activities than the non‐crown analogues. The catalytic activity of the complexes follows the order Mn(III)>Co(II) under the same ligands.