8‐Aminoquinoline‐Assisted Synthesis and Crystal Structure Studies of Ferrocenyl Aryl Sulfones

A copper‐catalyzed 8‐aminoquinoline‐directed oxidative cross‐coupling of the C?H bond of ferrocene with sodium arylsulfinates has been achieved. The robust copper catalyst tolerates a range of methyl, tert‐butyl, bromo, chloro, iodo and nitro functional groups in the phenyl ring, and set the stage for the synthesis of substituted ferrocene sulfones. Furthermore, X‐ray crystal structure study on several ferrocenyl sulfones reveals the tetrahedral geometry around sulfur; interestingly, the O‐S‐O angle is larger than the electropositive substituent C‐S‐C angle which could be explained by Bent's rule. Further, unusual intramolecular O(S)???N(amide) short contacts (2.925–3) and O(S)???C=O were also noticed in ferrocenyl sulfones.     

Copper‐Free Sonogashira Coupling of Acid Chlorides with Terminal Alkynes in the Presence of a Reusable Palladium Catalyst: An Improved Synthesis of 3‐Iodochromenones (=3‐Iodo‐4H‐1‐benzopyran‐4‐ones)

Pd/C is used as an efficient catalyst for the copper‐free Sonogashira coupling of acid chlorides and terminal alkynes to afford ynones in high yields (Tables 1 and 3). Cyclization of (2‐methoxyaryl)‐substituted ynones induced by I₂/ammonium cerium(IV) nitrate (CAN) at room temperature gave 3‐iodochromenones (=3‐iodo‐4H‐1‐benzopyran‐4‐ones) in excellent yield (Table 4).     

Convenient Synthesis of Alkenyl‐, Alkynyl‐, and Allenyl‐Substituted Imidazo[1,2‐a]pyridines via Palladium‐Catalyzed Cross‐Coupling Reactions

A systematic study on the Stille and Sonogashira cross‐coupling of iodinated imidazo[1,2‐a]pyridines was performed, permitting the preparation of various vinyl‐, ethynyl‐, and allenyl‐substituted derivatives. These methods are particularly valuable, given their experimental simplicity and high degree of flexibility with regard to functional groups that can be introduced in positions 3, 6, or 8 of the imidazo[1,2‐a]pyridine core. Effects concerning different substitution positions and the nature of the 2‐substituent under various reaction conditions are reported in detail for the above types of unsaturated groups introduced.     

Nitro‐substituted iron(II) tridentate bis(imino)pyridine complexes as high‐temperature catalysts for the production of α‐olefins

A new series of nitro‐substituted bis(imino)pyridine ligands {2,6‐bis[1‐(2‐methyl‐4‐nitrophenylimino)ethyl]pyridine, 2,6‐bis[1‐(4‐nitrophenylimino)ethyl]pyridine, (1‐{6‐[1‐(4‐nitro‐phenylimino)‐ethyl]‐pyridin‐2‐yl}‐ethylidene)‐(2,4,6‐trimethyl‐phenyl)‐amine, and 2,6‐bis[1‐(2‐methyl‐3‐nitrophenylimino)ethyl]pyridine} and their corresponding Fe(II) complexes [{p‐NO₂? o‐Me? Ph? N?C(Me)? Py? C(Me)?N? Ph? o‐ Me? p‐NO₂}FeCl₂ ( 10 ), L₂FeCl₂ ( 11 ), {m‐NO₂? o‐Me? Ph? N?C(Me)? Py? C(Me)?N? Ph? o‐Me? m‐NO₂}FeCl₂ ( 12 ), and {p‐NO₂? Ph? N?C(Me)? Py? C(Me)?N? Mes}FeCl₂ ( 14 )] were synthesized. According to X‐ray analysis, there were shortenings of the axial Fe? N bond lengths (up to 0.014 Å) in para‐nitro‐substituted complex 10 and (up to 0.015 Å) in meta‐nitro‐substituted complex 12 versus the Fe(II) complex without nitro groups [{o‐Me? Ph? N?C(Me)? Py? C(Me)?N? Ph? o‐Me}FeCl₂ ( 1 )]. Complexes 10 , 12 , and 14 afforded very active catalysts for the production of α‐olefins and were more temperature‐stable and had longer lifetimes than parent non‐nitro‐substituted Fe(II) complex 1 . The reaction between FeCl₂ and a sterically less hindered ligand [p‐NO₂? Ph? N?C(Me)? Py? C(Me)?N? Ph? p‐NO₂] resulted in the formation of octahedral complex 11 . A para‐dialkylamino‐substituted bis(imino)pyridine ligand [p‐NEt₂? o‐Me? Ph? N?C(Me)? Py? C(Me)?N? Ph? o‐Me? p‐NEt₂] and the corresponding Fe(II) complex [{p‐NEt₂? o‐Me? Ph? N?C(Me)? Py? C(Me)?N? Ph? o‐Me? p‐NEt₂}FeCl₂ ( 16 )] were synthesized to evaluate the effect of enhanced electron donation of the ligand on the catalytic performance. According to X‐ray analysis, there was a shortening (up to 0.043 Å) of the axial Fe? N bond lengths in para‐diethylamino‐substituted complex 16 in comparison with parent Fe(II) complex 1 . © 2006 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 44: 2615–2635, 2006     

Investigation of Steric Influences on Hydrogen‐Bonding Motifs in Cyclic Ureas by Using X‐Ray,Neutron, and Computational Methods

A series of urea‐derived heterocycles, 5N‐substituted hexahydro‐1,3,5‐triazin‐2‐ones, has been prepared and their structures have been determined for the first time. This family of compounds only differ in their substituent at the 5‐position (which is derived from the corresponding primary amine), that is, methyl ( 1 ), ethyl ( 2 ), isopropyl ( 3 ), tert‐butyl ( 4 ), benzyl ( 5 ), N,N‐(diethyl)ethylamine ( 6 ), and 2‐hydroxyethyl ( 7 ). The common heterocyclic core of these molecules is a cyclic urea, which has the potential to form a hydrogen‐bonding tape motif that consists of self‐associative (8) dimers. The results from X‐ray crystallography and, where possible, Laue neutron crystallography show that the hydrogen‐bonding motifs that are observed and the planarity of the hydrogen bonds appear to depend on the steric hindrance at the α‐carbon atom of the N substituent. With the less‐hindered substituents, methyl and ethyl, the anticipated tape motif is observed. When additional methyl groups are added onto the α‐carbon atom, as in the isopropyl and tert‐butyl derivatives, a different 2D hydrogen‐bonding motif is observed. Despite the bulkiness of the substituents, the benzyl and N,N‐(diethyl)ethylamine derivatives have methylene units at the α‐carbon atom and, therefore, display the tape motif. The introduction of a competing hydrogen‐bond donor/acceptor in the 2‐hydroxyethyl derivative disrupts the tape motif, with a hydroxy group interrupting the N? H???O?C interactions. The geometry around the hydrogen‐bearing nitrogen atoms, whether planar or non‐planar, has been confirmed for compounds 2 and 5 by using Laue neutron diffraction and rationalized by using computational methods, thus demonstrating that distortion of O‐C‐N‐H torsion angles occurs to maintain almost‐linear hydrogen‐bonding interactions.     

Nucleosides and Oligonucleotides with Diynyl Side Chains: Base Pairing and Functionalization of 2′‐Deoxyuridine Derivatives by the Copper(I)‐Catalyzed Alkyne?Azide ‘Click’ Cycloaddition

Oligonucleotides containing the 5‐substituted 2′‐deoxyuridines 1b or 1d bearing side chains with terminal C?C bonds are described, and their duplex stability is compared with oligonucleotides containing the 5‐alkynyl compounds 1a or 1c with only one nonterminal C?C bond in the side chain. For this, 5‐iodo‐2′‐deoxyuridine ( 3 ) and diynes or alkynes were employed as starting materials in the Sonogashira cross‐coupling reaction (Scheme 1). Phosphoramidites 2b – d were prepared (Scheme 3) and used as building blocks in solid‐phase synthesis. T_m Measurements demonstrated that DNA duplexes containing the octa‐1,7‐diynyl side chain or a diprop‐2‐ynyl ether residue, i.e., containing 1b or 1d , are more stable than those containing only one triple bond, i.e., 1a or 1c (Table 3). The diyne‐modified nucleosides were employed in further functionalization reactions by using the protocol of the Cu^I‐catalyzed Huisgen–Meldal–Sharpless [2+3] cycloaddition (‘click chemistry’) (Scheme 2). An aliphatic azide, i. e., 3′‐azido‐3′‐deoxythymidine (AZT; 4 ), as well as the aromatic azido compound 5 were linked to the terminal alkyne group resulting in 1H‐1,2,3‐triazole‐modified derivatives 6 and 7 , respectively (Scheme 2), of which 6 forms a stable duplex DNA (Table 3). The Husigen–Meldal–Sharpless cycloaddition was also performed with oligonucleotides (Schemes 4 and 5).     

Structures of Highly Twisted Amides Relevant to Amide N−C Cross‐Coupling: Evidence for Ground‐State Amide Destabilization

Herein, we show that acyclic amides that have recently enabled a series of elusive transition‐metal‐catalyzed N?C activation/cross‐coupling reactions are highly twisted around the N?C(O) axis by a new destabilization mechanism of the amide bond. A unique effect of the N‐glutarimide substituent, leading to uniformly high twist (ca. 90°) irrespective of the steric effect at the carbon side of the amide bond has been found. This represents the first example of a twisted amide that does not bear significant steric hindrance at the α‐carbon atom. The ¹⁵N NMR data show linear correlations between electron density at nitrogen and amide bond twist. This study strongly supports the concept of amide bond ground‐state twist as a blueprint for activation of amides toward N?C bond cleavage. The new mechanism offers considerable opportunities for organic synthesis and biological processes involving non‐planar amide bonds.     

Weak hydrogen and halogen bonding in 4‐[(2,2‐difluoroethoxy)methyl]pyridinium iodide and 4‐[(3‐chloro‐2,2,3,3‐tetrafluoropropoxy)methyl]pyridinium iodide

To enable a comparison between a C—H…X hydrogen bond and a halogen bond, the structures of two fluorous‐substituted pyridinium iodide salts have been determined. 4‐[(2,2‐Difluoroethoxy)methyl]pyridinium iodide, C₈H₁₀F₂NO⁺·I⁻, (1), has a –CH₂OCH₂CF₂H substituent at the para position of the pyridinium ring and 4‐[(3‐chloro‐2,2,3,3‐tetrafluoropropoxy)methyl]pyridinium iodide, C₉H₉ClF₄NO⁺·I⁻, (2), has a –CH₂OCH₂CF₂CF₂Cl substituent at the para position of the pyridinium ring. In salt (1), the iodide anion is involved in one N—H…I and three C—H…I hydrogen bonds, which, together with C—H…F hydrogen bonds, link the cations and anions into a three‐dimensional network. For salt (2), the iodide anion is involved in one N—H…I hydrogen bond, two C—H…I hydrogen bonds and one C—Cl…I halogen bond; additional C—H…F and C—F…F interactions link the cations and anions into a three‐dimensional arrangement.     

Iridium‐Catalyzed,Silyl‐Directed,peri‐Borylation of C−H Bonds in Fused Polycyclic Arenes and Heteroarenes

peri‐Disubstituted naphthalenes exhibit interesting physical properties and unique chemical reactivity, due to the parallel arrangement of the bonds to the two peri‐disposed substituents. Regioselective installation of a functional group at the position peri to 1‐substituted naphthalenes is challenging due to the steric interaction between the existing substituent and the position at which the second one would be installed. We report an iridium‐catalyzed borylation of the C?H bond peri to a silyl group in naphthalenes and analogous polyaromatic hydrocarbons. The reaction occurs under mild conditions with wide functional group tolerance. The silyl group and the boryl group in the resulting products are precursors to a range of functional groups bound to the naphthalene ring through C?C, C?O, C?N, C?Br and C?Cl bonds.     

Reaction of 4‐benzylidene‐2‐methyl‐5‐oxazolone with amines,Part 2: Influence of substituents in para‐position in the phenyl ring and a substituent on amine nitrogen atom on the reaction kinetics

An influence of a structure of the amine (benzylamine, N‐methyl‐benzylamine, N‐isopropyl‐benzylamine, N‐methyl‐butylamine, N‐ethyl‐butylamine, sec‐butylamine, and tert‐butylamine) on a rate constant of the ring‐opening reaction of 4‐benzylidene‐2‐methyl‐5‐oxazolone (Ox) was studied. The good correlation between logarithm of the rate constants and Charton's steric substituent constant ν as well as good correlation with a form of the simple branching equation indicate that there is a steric effect because of substitution at C1 carbon atom of nucleophile which decreases the reaction rate. Additionally, an influence of a structure of the benzylidene moiety of Ox on a rate of the oxazolone ring‐opening reaction was studied. The substituents (? OH, ? OCH₃, ? N(CH₃)₂, ? Cl, ? NO₂) in para‐position of the phenyl ring of Ox substantially modified the rate of the reaction with benzylamine in acetonitrile. The rate of the Ox ring‐opening reaction decreased with increase of the electron‐donating properties of the substituent. A good correlation between the rate constants of the reaction of 4‐(4′‐substituted‐benzylidene)‐2‐methyl‐5‐oxazolones with benzylamine and the electron density at the reaction center (carbon C5 of the oxazolone ring), calculated using ab initio method, and the Hammett substituent constants, and CR equation were established. © 2002 Wiley Periodicals, Inc. Int J Chem Kinet 34: 148–155, 2002; DOI 10.1002/kin.10039     

Uncovering stereochemical relations in a compound with a stereogenic N—O axis: methyl 2‐(4‐methyl‐2‐thio­xo‐2,3‐di­hydro­thia­zol‐3‐yl­oxy)­propanoate

The geometry of racemic methyl 2‐(4‐methyl‐2‐thio­xo‐2,3‐di­hydro­thia­zol‐3‐yl­oxy)­propanoate, C₈H₁₁NO₃S₂, (I), is characterized by a distorted heterocyclic five‐membered ring and an enantiomorphic N‐alkoxy substituent, which is inclined at an angle of −68.8° to the thia­zole­thione plane in (M)‐(I). The unit cell consists of a 1:1 ratio of R,P‐ and S,M‐configured mol­ecules of (I). The combination of a P configuration at the N—O axis and an R configuration at the asymmetric propanoate C_β atom on one side, and an S,M configuration on the other side, is considered to originate from steric interactions. The largest substituent at the asymmetric propanoate C_β atom, i.e. the methoxycarbonyl group, resides above the methyl substituent; the medium‐sized propanoate γ‐methyl substituent points in the opposite direction with respect to the N—O bond, whereas the H atom is located above the C=S double bond of the thiazolethione subunit.     

Conformational Analysis of the Anti‐obesity Drug Lorcaserin in Water: How To Take Advantage of Long‐Range Residual Dipolar Couplings

The conformational state of 8‐chloro‐1‐methyl‐2,3,4,5‐tetrahydro‐1H‐3‐benzazepine hydrochloride (lorcaserin) in water has been determined on the basis of one‐bond and long‐range C? H residual dipolar coupling (RDC) data along with DFT computations and ³J_HH coupling‐constant analysis. According to this analysis, lorcaserin exists as a conformational equilibrium of two crown‐chair forms, of which the preferred conformation has the methyl group in an equatorial orientation.     

Intramolecular Metal‐Free Oxidative Aryl–Aryl Coupling: An Unusual Hypervalent‐Iodine‐Mediated Rearrangement of 2‐Substituted N‐Phenylbenzamides

Hypervalent‐iodine‐mediated oxidative coupling of the two aryl groups in either 2‐acylamino‐N‐phenyl‐benzamides or 2‐hydroxy‐N‐phenylbenzamides, with concomitant insertion of the ortho‐substituted N or O atom into the tether, has been described for the first time. This unusual metal‐free rearrangement reaction involves an oxidative C(sp²)? C(sp²) aryl–aryl bond formation, cleavage of a C(sp²)? C(O) bond, and a lactamization/lactonization. Furthermore, unsymmetrical diaryl compounds can be easily obtained by removing the tether within the cyclized product.     

Synthesis of Novel 3‐Acetyl‐2‐Aryl‐5‐(3‐Aryl‐1‐Phenyl‐Pyrazol‐4‐yl)‐2,3‐Dihydro‐1,3,4‐Oxadiazoles

A series of novel pyrazolyl‐substituted 1,3,4‐oxadiazole derivatives ( 4a‐4o ) were prepared by cyclization of the intermediate N′‐((3‐aryl‐l‐phenyl‐pyrazol‐4‐yl)methylene)arylhydrazide with acetic anhydride. The structures of the new compounds were confirmed by IR, ¹H NMR, MS and elemental analysis. Furthermore, preliminary bioassay of some of the title compounds indicated that they exhibited moderate inhibition against HIV‐1 PR.     

Highly reusable support‐free copper(II) complex of para‐hydroxy‐substituted salen: Novel,efficient and versatile catalyst for C─N bond forming reactions

An air‐stable, highly active and versatile method for C─N bond forming reactions is reported. Under mild conditions using a highly reusable support‐free Cu(II)–salen complex, structurally diverse N ‐aryl‐substituted compounds were obtained via direct C─N bond forming reaction of HN‐heterocycles with aryl iodides or three‐component C─N bond forming reaction of 2‐bromobenzaldehyde, aniline derivatives and sodium azide in good to excellent yields. C─N bond forming reaction for benzimidazole derivatives was also performed in the presence of the catalyst under ambient conditions. A series of hybrid benzimidazoles bearing morpholine, tetrazole and quinoxaline backbones were produced using this method. All reactions were performed in short times under air. The Cu(II) catalyst could be reused up to eight times in the direct cross‐coupling reaction of 9H –carbazole with iodobenzene without any decrease in its catalytic activity.     

Hypervalent Activation as a Key Step for Dehydrogenative ortho CC Coupling of Iodoarenes

Building on earlier results, a direct metal‐free α‐ arylation of substituted cyclic 1,3‐diones using ArI(O₂CCF₃)₂ reagents has been developed; unlike other arylative approaches, the arylated products retain the iodine substituent ortho to the newly formed C?C bond. The mechanism is explored by using DFT calculations, which show a vanishingly small activation barrier for the C?C bond‐forming step. In fact, taking advantage of an efficient in situ hypervalent activation, the iodoarenes are shown to undergo a cross‐ dehydrogenative C?C coupling at the C?H ortho to the iodine. When Oxone is used as terminal oxidant, the process is found to benefit from a rapid initial formation of the hypervalent ArI(OR)₂ species and the sulfate‐accelerated final coupling with a ketone. This method complements the ipso selectivity obtained in the metal‐catalyzed α‐arylation of carbonyl compounds.     

A computational study on the ring stretching modes of halogen‐substituted pyridine involved in H‐bonding

Density functional method B3LYP plus the AUG‐cc‐pVDZ and AUG‐cc‐pVTZ basis sets is used to investigate ring normal modes of halogen‐substituted pyridines involved in the N ··· H? X H‐bonds with HX (X = F, Cl). The results demonstrated that the formation of hydrogen bond leads to an increase in the frequencies of the ring breathing mode v₁, the N‐para‐C stretching mode v_6a and the meta‐CC stretching mode v_8a, whereas there is no change in the triangle mode v₁₂ for free pyridine and a smaller blue shift for substituted pyridines. There is a strong coupling between the C? Y stretching vibration and the triangle mode (ortho‐ and para‐substituted) or the breathing mode (meta‐substituted) in substituted pyridines, which leads to the frequency decrease in the triangle or breathing modes. The natural bond orbital analysis suggests that electrostatic interaction and charge transfer caused by the intermolecular and intramolecular hyperconjugations are the origin of the frequency blue shift in the ring stretching modes. © 2011 Wiley Periodicals, Inc. Int J Quantum Chem, 2012     

The Synthesis of 1,4‐Bis[N‐(4/6‐Substituted Benzothiazole‐2‐yl)‐N′‐Glycosylguanidino]Benzenes

The starting material O‐protected glycosyl isothiocyanate ( 1?3 ) was refluxed with 1,4‐diaminobenzene in CHCl₃ under nitrogen atmosphere to give 1,4‐bis(N‐glycosyl)thioureidobenzene ( 4?6 ). Then 1,4‐bis[N‐(4/6‐substituted benzothiazole‐2‐yl)‐N′‐glycosylguanidino]benzenes ( 8a?8e , 9a?9e , 10a?10e ) were obtained in good yield by reaction of compounds ( 4?6 ) with 2‐amino‐4/6‐benzothizoles ( 7a?7e ) and HgCl₂ in the presence of TEA in DMF. The structures of all 18 new compounds were confirmed by IR, ¹H NMR, LC‐MS and elemental analysis. The bioactivity of anti‐HIV‐1 protease (HIV‐1 PR) and against angiotensin converting enzyme (ACE) have been evaluated.     

Theory of the Formation and Decomposition of N‐Heterocyclic Aminooxycarbenes through Metal‐Assisted [2+3]‐Dipolar Cycloaddition/Retro‐Cycloaddition

The theoretical background of the formation of N‐heterocyclic oxadiazoline carbenes through a metal‐assisted [2+3]‐dipolar cycloaddition (CA) reaction of nitrones R¹CH?N(R²)O to isocyanides C?NR and the decomposition of these carbenes to imines R¹CH?NR² and isocyanates O?C?NR is discussed. Furthermore, the reaction mechanisms and factors that govern these processes are analyzed in detail. In the absence of a metal, oxadiazoline carbenes should not be accessible due to the high activation energy of their formation and their low thermodynamic stability. The most efficient promotors that could assist the synthesis of these species should be “carbenophilic” metals that form a strong bond with the oxadiazoline heterocycle, but without significant involvement of π‐back donation, namely, Au^I, Au^III, Pt^II, Pt^IV, Re^V, and Pd^II metal centers. These metals, on the one hand, significantly facilitate the coupling of nitrones with isocyanides and, on the other hand, stabilize the derived carbene heterocycles toward decomposition. The energy of the LUMO_CNR and the charge on the N atom of the C?N group are principal factors that control the cycloaddition of nitrones to isocyanides. The alkyl‐substituted nitrones and isocyanides are predicted to be more active in the CA reaction than the aryl‐substituted species, and the N,N,C‐alkyloxadiazolines are more stable toward decomposition relative to the aryl derivatives.     

Synthesis and molecular structures of 1‐boracyclopent‐2‐enes

The reaction of 1‐silyl‐1‐borylalkenes with alkyn‐1‐yltin compounds affords borol‐2‐enes, organometallic‐substituted allenes, mixtures thereof or even more complex mixtures with buta‐1,3‐dienes, depending on the third substituent at the C?C bond (Bu or Ph), on the number of Si? Cl functions (two or three) and the nature of the alkyn‐1‐yltin compound. Six new borol‐2‐enes were isolated in pure state, and two of them were characterized by X‐ray structural analysis. The solution‐state structures of all major products were clearly established by multinuclear magnetic resonance methods (¹H, ¹¹B, ¹³C, ²⁹Si, ¹¹⁹Sn NMR). Copyright © 2009 John Wiley & Sons, Ltd.