Macrocyclic lanthanide complexes as artificial nucleases and ribonucleases: effects of pH, metal ionic radii, number of coordinated water molecules, charge, and concentrations of the metal complexes

We have been interested in the design, synthesis, and characterization of artificial nucleases and ribonucleases by employing macrocyclic lanthanide complexes because their high thermodynamic stability, low kinetic lability, high coordination number, and charge density (Lewis acidity) allow more design flexibility and stability. In this paper, we report the study of the use of the europium(III) complex, EuDO2A+ (DO2A is 1,7-dicarboxymethyl-1,4,7,10-tetraazacyclododecane) and other lanthanide complexes (i.e., LaDO2A+, YbDO2A+, EuK21DA+, EuEDDA+, and EuHEDTA where K21DA is 1,7-diaza-4,10,13-trioxacyclopentadecane-N,N'-diacetic acid, EDDA is ethylenediamine-N,N'-diacetic acid, and HEDTA is N-hydroxyethyl-ethylenediamine-N,N',N'-triacetic acid), as potential catalysts for the hydrolysis of the phosphodiester bond of BNPP (sodium bis(4-nitrophenyl)-phosphate). For the pH range 7.0-11.0 studied, EuDO2A+ promotes BNPP hydrolysis with the quickest rates among LaDO2A+, EuDO2A+, and YbDO2A+. This indicates that charge density is not the only factor affecting the reaction rates. Among the four complexes, EuDO2A+, EuK21DA+, EuEDDA+, and EuHEDTA, with their respective number of inner-sphere coordinated water molecules three, two, five, and three, EuEDDA+, with the greatest number of inner-sphere coordinated water molecules and a positive charge, promotes BNPP hydrolysis more efficiently at pH below 8.4, and the observed rate trend is EuEDDA+ > EuDO2A+ > EuK21DA+ > EuHEDTA. At pH > 8.4, the EuEDDA+ solution becomes misty and precipitates form. At pH 11.0, the hydrolysis rate of BNPP in the presence of EuDO2A+ is 100 times faster than that of EuHEDTA, presumably because the positively charged EuDO2A+ is more favorable for binding with the negatively charged phosphodiester compounds. The logarithmic hydrolysis constants (pKh) were determined, and are reported in the parentheses, by fitting the kinetic k(obs) data vs pH for EuDO2A+ (8.4), LaDO2A+ (8.4), YbDO2A+ (9.4), EuK21DA+ (7.8), EuEDDA+ (9.0), and EuHEDTA (10.1). The preliminary rate constant-[EuDO2A+] data at pH 9.35 were fitted to a monomer-dimer reaction model, and the dimer rate constant is 400 times greater than that of the monomer. The fact that YbDO2A+ catalyzes BNPP less effectively than EuDO2A+ is tentatively explained by the formation of an inactive dimer, [Yb(DO2A)(OH)]2, with no coordination unsaturation for BNPP substrate binding.     

Catalytic and direct oxidation of cysteine by octacyanomolybdate(V)

The oxidation of cysteine by [Mo(CN)(8)](3-) in deoxygenated aqueous solution at a moderate pH is strongly catalyzed by Cu(2+), to the degree that impurity levels of Cu(2+) are sufficient to dominate the reaction. Dipicolinic acid (dipic) is a very effective inhibitor of this catalysis, such that with 1 mM dipic, the direct oxidation can be studied. UV-vis spectra and electrochemistry show that [Mo(CN)(8)](4-) is the Mo-containing product. Cystine and cysteinesulfinate are the predominant cysteine oxidation products. The stoichiometric ratio (Deltan(Mo(V))/Deltan(cysteine)) of 1.4 at pH 10.8 is consistent with this product distribution. At pH 1.5, the reaction is quite slow and yields intractable kinetics. At pH 4.5, the rates are much faster and deviate only slightly from pseudo-first-order behavior. With 2 mM PBN (N-phenyl-tert-butyl nitrone) present at pH 4.5, the reaction rate is about 20% less and shows excellent pseudo-first-order behavior, but the stoichiometric ratio is not significantly changed. The rates also display a significant specific cation effect. In the presence of spin-trap PBN, the kinetics were studied over the pH range 3.48-12.28, with [Na(+)] maintained at 0.09-0.10 M. The rate law is -d[Mo(V)]/dt = k[cysteine](tot)[Mo(V)], with k = {2(k(b)K(a1)K(a2)[H(+)] + k(c)K(a1)K(a2)K(a3))}/([H(+)](3) + K(a1)[H(+)](2) + K(a1)K(a2)[H(+)] + K(a1)K(a2)K(a3)), where K(a1), K(a2), and K(a3) are the successive acid dissociation constants of HSCH(2)CH(NH(3)(+))CO(2)H. Least-squares fitting yields k(b) = (7.1 +/- 0.4) x 10(4) M(-1) s(-1) and k(c) = (2.3 +/-0.2) x 10(4) M(-1) s(-1) at mu = 0.1 M (NaCF(3)SO(3)) and 25 degrees C. A mechanism is inferred in which k(b) and k(c) correspond to electron transfer to Mo(V) from the thiolate forms of anionic and dianionic cysteine.     

Rates of water exchange on the [Fe4(OH)2(hpdta)2(H2O)4]0 molecule and its implications for geochemistry

The ammonium salt of [Fe(4)O(OH)(hpdta)(2)(H(2)O)(4)](-) is soluble and makes a monospecific solution of [Fe(4)(OH)(2)(hpdta)(2)(H(2)O)(4)](0)(aq) in acidic solutions (hpdta = 2-hydroxypropane-1,3-diamino-N,N,N',N'-tetraacetate). This tetramer is a diprotic acid with pK(a)(1) estimated at 5.7 ± 0.2 and pK(a)(2) = 8.8(5) ± 0.2. In the pH region below pK(a)(1), the molecule is stable in solution and (17)O NMR line widths can be interpreted using the Swift-Connick equations to acquire rates of ligand substitution at the four isolated bound water sites. Averaging five measurements at pH < 5, where contribution from the less-reactive conjugate base are minimal, we estimate: k(ex)(298) = 8.1 (±2.6) × 10(5) s(-1), ΔH(++) = 46 (±4.6) kJ mol(-1), ΔS(++) = 22 (±18) J mol(-1) K(-1), and ΔV(++) = +1.85 (±0.2) cm(3) mol(-1) for waters bound to the fully protonated, neutral molecule. Regressing the experimental rate coefficients versus 1/[H(+)] to account for the small pH variation in rate yields a similar value of k(ex)(298) = 8.3 (±0.8) × 10(5) s(-1). These rates are ～10(4) times faster than those of the [Fe(OH(2))(6)](3+) ion (k(ex)(298) = 1.6 × 10(2) s(-1)) but are about an order of magnitude slower than other studied aminocarboxylate complexes, although these complexes have seven-coordinated Fe(III), not six as in the [Fe(4)(OH)(2)(hpdta)(2)(H(2)O)(4)](0)(aq) molecule. As pH approaches pK(a1), the rates decrease and a compensatory relation is evident between the experimental ΔH(++) and ΔS(++) values. Such variation cannot be caused by enthalpy from the deprotonation reaction and is not well understood. A correlation between bond lengths and the logarithm of k(ex)(298) is geochemically important because it could be used to estimate rate coefficients for geochemical materials for which only DFT calculations are possible. This molecule is the only neutral, oxo-bridged Fe(III) multimer for which rate data are available.     

Role of alkali metal cation size in the energy and rate of electron transfer to solvent-separated 1:1 [(M+)(acceptor)] (M+ = Li+, Na+, K+) ion pairs.

The effect of cation size on the rate and energy of electron transfer to [(M(+))(acceptor)] ion pairs is addressed by assigning key physicochemical properties (reactivity, relative energy, structure, and size) to an isoelectronic series of well-defined M(+)-acceptor pairs, M(+) = Li(+), Na(+), K(+). A 1e(-) acceptor anion, alpha-SiV(V)W(11)O(40)(5-) (1, a polyoxometalate of the Keggin structural class), was used in the 2e(-) oxidation of an organic electron donor, 3,3',5,5'-tetra-tert-butylbiphenyl-4,4'-diol (BPH(2)), to 3,3',5,5'-tetra-tert-butyldiphenoquinone (DPQ) in acetate-buffered 2:3 (v/v) H(2)O/t-BuOH at 60 degrees C (2 equiv of 1 are reduced by 1e(-) each to 1(red), alpha-SiV(IV)W(11)O(40)(6-)). Before an attempt was made to address the role of cation size, the mechanism and conditions necessary for kinetically well behaved electron transfer from BPH(2) to 1 were rigorously established by using GC-MS, (1)H, (7)Li, and (51)V NMR, and UV-vis spectroscopy. At constant [Li(+)] and [H(+)], the reaction rate is first order in [BPH(2)] and in [1] and zeroth order in [1(red)] and in [acetate] (base) and is independent of ionic strength, mu. The dependence of the reaction rate on [H(+)] is a function of the constant, K(a)1, for acid dissociation of BPH(2) to BPH(-) and H(+). Temperature dependence data provided activation parameters of DeltaH = 8.5 +/- 1.4 kcal mol(-1) and DeltaS = -39 +/- 5 cal mol(-1) K(-1). No evidence of preassociation between BPH(2) and 1 was observed by combined (1)H and (51)V NMR studies, while pH (pD)-dependent deuterium kinetic isotope data indicated that the O-H bond in BPH(2) remains intact during rate-limiting electron transfer from BPH(2) and 1. The formation of 1:1 ion pairs [(M(+))(SiVW(11)O(40)(5-))](4-) (M(+)1, M(+) = Li(+), Na(+), K(+)) was demonstrated, and the thermodynamic constants, K(M)(1), and rate constants, k(M)(1), associated with the formation and reactivity of each M(+)1 ion pair with BPH(2) were calculated by simultaneous nonlinear fitting of kinetic data (obtained by using all three cations) to an equation describing the rectangular hyperbolic functional dependence of k(obs) values on [M(+)]. Constants, K(M)(1)red, associated with the formation of 1:1 ion pairs between M(+) and 1(red) were obtained by using K(M)(1) values (from k(obs) data) to simultaneously fit reduction potential (E(1/2)) values (from cyclic voltammetry) of solutions of 1 containing varying concentrations of all three cations to a Nernstian equation describing the dependence of E(1/2) values on the ratio of thermodynamic constants K(M)(1) and K(M)(1)red. Formation constants, K(M)(1), and K(M)(1)red, and rate constants, k(M)(1), all increase with the size of M(+) in the order K(Li)(1) = 21 < K(Na)(1) = 54 < K(K)(1) = 65 M(-1), K(Li)(1)red = 130 < K(Na)(1)red = 570 < K(K)(1)red = 2000 M(-1), and k(Li)(1) = 0.065 < k(Na)(1) = 0.137 < k(K)(1) = 0.225 M(-1) s(-1). Changes in the chemical shifts of (7)Li NMR signals as functions of [Li(5)1] and [Li(6)1(red)] were used to establish that the complexes M(+)1 and M(+)1(red) exist as solvent-separated ion pairs. Finally, correlation between cation size and the rate and energy of electron transfer was established by consideration of K(M)(1), k(M)(1), and K(M)(1)red values along with the relative sizes of the three M(+)1 pairs (effective hydrodynamic radii, r(eff), obtained by single-potential step chronoamperometry). As M(+) increases in size, association constants, K(M)(1), become larger as smaller, more intimate solvent-separated ion pairs, M(+)1, possessing larger electron affinities (q/r), and associated with larger k(M)(1)() values, are formed. Moreover, as M(+)1 pairs are reduced to M(+)1(red) during electron transfer in the activated complexes, [BPH(2), M(+)1], contributions of ion pairing energy (proportional to -RT ln(K(M)(1)red/K(M)(1)) to the standard free energy change associated with electron transfer, DeltaG degrees (et), increase with cation size: -RT ln(K(M)(1)red/K(M)(1)) (in kcal mol(-1)) = -1.2 for Li(+), -1.5 for Na(+), and -2.3 for K(+).     

Effects of auxiliary complex-forming agents on the rate of metallochromic indicator colour change--II: mechanism of the colour change of pan in copper-EDTA titrations

The rate of the ligand substitution reaction of copper (II)-PAN (CuR) with EDTA (Y) has been determined spectrophotometrically in 5% v/v dioxan over the pH range 5.0-6.3 at mu = 0.1 (NaClO(4)) and at 25 degrees . In the absence of 1,10-phenanthroline the rate law is expressed as -d[CuR(+)]/dt = 10(3.2) [CuR(+) [Y'], and the release of PAN from the reaction intermediate CuRY is the rate-determining step. In the presence of 1,10-phenanthroline (X), however, copper forms a stable mixed-ligand complex (CuRX(+)), and the rate of substitution with EDTA is expressed as -d[CuRX(+)]/dt = (10(6.2)[H(+)] + 10(4.8)[X]) [CuRX(+). The release of PAN from the mixed-ligand complex by H(+) and X is possibly the rate-determining step, with the copper-phenanthroline complexes produced undergoing fast exchange with EDTA. The stability constant of CuRX(+) has been determined spectrophotometrically in 5% v/v dioxan at mu = 0.1, and at 25 degrees as [CuRX(+)]/[Cu(2+)] [R(-)] [X] = 10(21.2). The acceleration of the rate of substitution of copper (II)-PAN chelate may be explained by the fact that the Cu-PAN bond in the distorted octahedral mixed-ligand complex CuRX is weaker than in the reaction intermediate CuRY.     

Acid-catalyzed oxidation of iodide ions by superoxo complexes of rhodium and chromium

Superoxometal complexes L(H(2)O)MOO(2+) (L = (H(2)O)(4), (NH(3))(4), or N(4)-macrocycle; M = Cr(III), Rh(III)) react with iodide ions according to the stoichiometry L(H(2)O)MOO(2+) + 3I(-) + 3H(+) --> L(H(2)O)MOH(2+) + 1.5I(2) + H(2)O. The rate law is -d[L(H(2)O)MOO(2+)]/dt = k [L(H(2)O)MOO(2+)][I(-)][H(+)], where k = 93.7 M(-2) s(-1) for Cr(aq)OO(2+), 402 for ([14]aneN(4))(H(2)O)CrOO(2+), and 888 for (NH(3))(4)(H(2)O)RhOO(2+) in acidic aqueous solutions at 25 degrees C and 0.50 M ionic strength. The Cr(aq)OO(2+)/I(-) reaction exhibits an inverse solvent kinetic isotope effect, k(H)()2(O)/k(D)2(O) = 0.5. In the proposed mechanism, the protonation of the superoxo complex precedes the reaction with iodide. The related Cr(aq)OOH(2+)/I(-) reaction has k(H)2(O)/k(D)2(O) = 0.6. The oxidation of (NH(3))(5)Rupy(2+) by Cr(aq)OO(2+) exhibits an [H(+)]-dependent pathway, rate = (7.0 x 10(4) + 1.78 x 10(5)[H(+)])[Ru(NH(3))(5)py(2+)][Cr(aq)OO(2+)]. Diiodine radical anions, I(2)(*)(-), reduce Cr(aq)OO(2+) with a rate constant k = 1.7 x 10(9) M(-1) s(-1).     

Multiple-path dissociation mechanism for mono- and dinuclear tris(hydroxamato)iron(III) complexes with dihydroxamic acid ligands in aqueous solution

Linear synthetic dihydroxamic acids ([CH3N(OH)C=O)]2(CH2)n; H2Ln) with short (n = 2) and long (n = 8) hydrocarbon-connecting chains form mono- and dinuclear complexes with Fe(III) in aqueous solution. At conditions where the formation of Fe2(Ln)3 is favored, complexes with each of the two ligand systems undergo [H+]-induced ligand dissociation processes via multiple sequential and parallel paths, some of which are common and some of which are different for the two ligands. The pH jump induced ligand dissociation proceeds in two major stages (I and II) where each stage is shown to be comprised of multiple components (Ix, where x = 1-3 for L2 and L8, and IIy, where y = 1-3 for L2 and y = 1-4 for L8). A reaction scheme consistent with kinetic and independent ESI-MS data is proposed that includes the tris-chelated complexes (coordinated H2O omitted for clarity) (Fe2(Ln)3, Fe2(L2)2(L2H)2, Fe(LnH)3, Fe(L8)(L8H)), bis-chelated complexes (Fe2(Ln)2(2+), Fe(LnH)2+, Fe(L8)+), and monochelated complexes (Fe(LnH)2+). Analysis of kinetic data for ligand dissociation from Fe2(Ln)(LnH)3+ (n = 2, 4, 6, 8) allows us to estimate the dielectric constant at the reactive dinuclear Fe(III) site. The existence of multiple ligand dissociation paths for the dihydroxamic acid complexes of Fe(III) is a feature that distinguishes these systems from their bidentate monohydroxamic acid and hexadentate trihydroxamic acid counterparts and may be a reason for the biosynthesis of dihydroxamic acid siderophores, despite higher environmental molar concentrations necessary to completely chelate Fe(III).     

Oxidation of thioglycolate by [Os(phen)3]3+: an unusual example of redox-mediated aromatic substitution

The aqueous oxidation of thioglycolic acid (TGA) by [Os(phen)(3)](3+) (phen = 1,10-phenanthroline) is catalyzed by traces of ubiquitous Cu(2+) and inhibited by the product [Os(phen)(3)](2+). In the presence of dipicolinic acid (dipic), which thoroughly masks trace Cu(2+) catalysis, and spin trap PBN, the kinetics under anaerobic conditions have been studied in the pH range 1.82-7.32. The rate law is -d[Os(phen)(3)(3+)]/dt = k[TGA](tot)[Os(phen)(3)(3+)], with k = 2{(k(b)K(a1) + k(c)K(a1)K(i))[H(+)] + k(d)K(a1)K(a2)}/{[H(+)](2) + K(a1)[H(+)] + K(a1)K(a2)}; K(a1) and K(a2) are the successive acid dissociation constants of TGA, and K(i) is the tautomerization constant of two TGA monoanions. k(b) + k(c)K(i) = (5.9 +/- 0.3) x 10(3) M(-)(1) s(-)(1), k(d) = (1.6 +/- 0.1) x 10(9) M(-)(1) s(-)(1) at mu = 0.1 M (NaCF(3)SO(3)) and 25 degrees C. The major products in the absence of spin traps are dithiodiglycolic acid, [Os(phen)(3)](2+), and [Os(phen)(2)(phen-tga)](2+), where phen-tga is phenanthroline with a TGA substituent. A mechanism is proposed in which neutral TGA is unreactive, the (minor) thiolate form of the TGA monoanion undergoes one-electron oxidation by [Os(phen)(3)](3+) (k(c)), and the dianion of TGA likewise undergoes one-electron oxidation by [Os(phen)(3)](3+) (k(d)). The Marcus cross relationship provides a good account for the magnitude of k(d) in this and related reactions of TGA. [Os(phen)(2)(phen-tga)](2+) is suggested to arise from a post-rate-limiting step involving attack of the TGA(*) radical on [Os(phen)(3)](3+).     

Kinetic studies of the on/off reaction of the amino group in the side chain of Cu(II), Ni(II), and Co(II) complexes with 14-membered tetraazamacrocycles

The kinetics of the on/off reaction of the amino group in the side chain of tetraazamacrocyclic Cu2+, Ni2+ and Co2+ complexes has been measured. The rate law k(obs)=k(0)+k(H)[H+]+k(OH)/[H+], the sum of the forward and reverse reaction, gives rise to u-shaped pH dependences from which the three rate constants can be determined. k(H) describes the proton assisted dissociation of the amino group bound to the metal ion and is roughly correlated to the equilibrium constant of the reaction. k(OH) is determined by the protonation constant of the free amino group and the rate constant describing the binding of the amino group to the metal ion. k(0) is composed of the rate constant for the opening of the chelate ring without proton assistance and the rate for the reactivity of the ammonium group in the formation of the chelate ring. Our results show that the rates of the opening and closing of the chelate ring are very little dependent on the nature of the metal ion.     

Kinetics of Dissociation of Iron(III) Complexes of Tiron in Aqueous Acid

The kinetics of dissociation of the mono, bis, and tris complexes of Tiron (1,2-dihydroxy-3,5-benzenedisulfonate) have been studied in acidic aqueous solutions in 1.0 M HClO(4)/NaClO(4), as a function of [H(+)] and temperature. In general, the kinetics can be explained by two reactions, (H(2)O)Fe(L)(n)(-1) + H(2)L right arrow over left arrow (H(2)O)Fe(L(n)H) + H(+) (k(n), k(-n)) and (HO)Fe(L)(n)(-1) + H(2)L right arrow over left arrow (H(2)O)Fe(L(n)H) (k(n)', k(-n)'), a rapid equilibrium, (H(2)O)Fe(L(n)H) right arrow over left arrow (H(2)O)Fe(L)(n) + H(+) (K(cn)), and the formation constant (H(2)O)Fe(L)(n)(-1) + H(2)L right arrow over left arrow (H(2)O)Fe(L)(n) + 2H(+). For n = 1, the reaction was observed at 670 nm, and at [H(+)] of 0.05-0.5 M at temperatures of 2.0, 14.0, 25.0, and 36.7 degrees C. For n = 2, the analogous conditions are 562 nm, at [H(+)] of 1.5 x 10(-3) to 1.4 x 10(-2) M at temperatures of 2.0, 9.0, and 14.0 degrees C. For n = 3, the conditions are 482 nm, at pH 4.5-5.7 in 0.02 M acetate buffer at temperatures of 1.8, 8.0, and 14.5 degrees C. The rate or equilibrium constants (25 degrees C) with DeltaH or DeltaH degrees (kcal mol(-1)) and DeltaS or DeltaS degrees (cal mol(-1) K(-1)) in brackets are as follows: for n = 1, k(1) = 2.3 M(-1) s(-1) (8.9, -27.1), k(-1) = 1.18 M(-1) s(-1) (4.04, -44.8), K(c1) = 0.96 M (-9.99, -33.6), K(f1) = 2.01 M (-5.14, -15.85); for n = 2, k(-2)/K(c2) = 1.9 x 10(7) (19.9, 41.5) and k(-2)'/K(c2) = 1.85 x 10(3) (1.4, -38.8) and a lower limit of K(c2) > 0.015 M; for n = 3, k(3) = 7.7 x 10(3) (15.8, 12.3), k(-3) = 1.7 x 10(7) (16.2, 28.9), K(c3) = 7.4 x 10(-5) M (4.1, -5.1), and K(f3) = 3.35 x 10(-8) (3.7, -21.7). From the variations in rate constants and activation parameters, it is suggested that the Fe(L)(2) and Fe(L)(3) complexes undergo substitution by dissociative activation, promoted by the catecholate ligands.     

Dynamic chiral-at-metal stability of tetrakis(d/l-hfc)Ln(III) complexes capped with an alkali metal cation in solution

Chiral tetrakis(β-diketonate) Ln(III) complexes Δ-[NaLa(d-hfc)(4)(CH(3)CN)] (1) and Λ-[NaLa(l-hfc)(4) (CH(3)CN)] (2) (d/l-hfc(-) = 3-heptafluo-robutylryl-(+)/(-)-camphorate) are a pair of enantiomers and crystallize in the same Sohncke space group (P2(1)2(1)2(1)) with dodecahedral (DD) geometry. Typically positive and negative exciton splitting patterns around 320 nm were observed in the solid-state circular dichroism (CD) spectra of complexes 1 and 2, which indicate that their shell configurational chiralities are Δ and Λ, respectively. The apparent bisignate couplets in the solid-state CD spectra of [CsLn(d-hfc)(4)(H(2)O)] [Ln = La (3), Yb (5)] and [CsLn(l-hfc)(4)(H(2)O)] [Ln = La (4), Yb (6)] show that they are a pair of enantiomers and their absolute configurations are denoted Δ and Λ, respectively. The crystallographic data of 5 reveals that its coordination polyhedron is the square antiprism (SAP) geometry and it undergoes a phase transition from triclinic (α phase, P1) to monoclinic (β phase, C2) upon cooling. The difference between the two phases is brought about by the temperature dependent behaviour of the coordination water molecules, but this did not affect the configurational chirality of the Δ-SAP-[Yb(d-hfc)(4)](-) moiety. Furthermore, time-dependent CD, UV-vis and (19)F NMR were applied to study the solution behavior of these complexes. It was found that the chiral-at-metal stability of the three pairs of complexes is different and affected by both the Ln(3+) and M(+) ion size. The results show that the Cs(+) cation can retain the metal center chirality and stablize the structures of [Ln(d/l-hfc)(4)](-) or the dissociated tris(d/l-hfc)Ln(III) species in solution for a longer time than that of the Na(+) cation, and it is important that the Cs(+) ion successfully lock the configurational chirality around the Yb(3+) center of the complex species in solution. This is reasoned by the short Cs(+)···FC, Cs(+)···O-Yb and Cs(+)···Yb(3+) interactions observed in the crystal structure of α-5 and further confirmed by the chiral self-assembly of 5 or 6 from [Yb(H(2)O)(d/l-hfc)(3)] induced by CsI in a CHCl(3) solution.     

Controlled aggregation of heterometallic nanoscale Cu12Ln6 clusters (Ln = Gd(III) or Nd(III)) into 2D coordination polymers

Discrete dinuclear and polymeric heterometallic copper(II)-lanthanide(III) complexes have been synthesized upon variation of pH and characterized by X-ray diffraction analysis. Reactions of the ligand Htza (tetrazole-1-acetic acid) with copper(II) and lanthanide(III) salts gave dinuclear [CuLn(tza)4(H2O)5Cl] complexes at the low pH of 3.5 and 2D heterometallic coordination polymers with high-nuclearity [{Cu2(OH)2}2{Cu12Ln6(mu3-OH)24(Cl)(1/2)(NO3)(1/2)(tza)12(H2O)18}](NO3)(9).8H2O (Ln = Gd or Nd) at a higher pH of 6.6. The acidity of the reaction solution can cause drastic changes in the structures of the products. In the dinuclear complexes, each pair of adjacent dinuclear molecules is linked through hydrogen bonds and pi-pi stacking interactions, and the whole structure is a hydrogen-bonded three-dimensional cubic net. In the coordination polymers, the connecting nodes are [Cu12Ln6] units, which are interconnected by [Cu2O2] units into two-dimensional structures. Magnetic studies exhibit the existence of weak exchange interactions between the Cu(II) and Ln(III) ions bridged by carboxylate and hydroxy ligands.     

Electron-Transfer Reactions of Re(CO)(5): Atom-Transfer-Concerted Mechanism vs Bimetallic Intermediate Formation

Flash photochemically generated Re(CO)(5) reacts with halide complexes, Cu(Me(4)[14]-1,3,8,10-tetraeneN(4))X(+), Cu(Me(2)pyo[14]trieneN(4))X(+), and Ni(Me(2)pyo[14]trieneN(4))X(+) (X = Cl, Br, I) and ion pairs, [Co(bipy)(3)(3+), X(-)]. The rate constants for the electron transfers have values, k approximately 10(9) M(-1) s(-1), close to expectations for processes with diffusion-controlled rates. Reaction intermediates, probably bimetallic species, were detected in electron-transfer reactions of Re(CO)(5) with Cu(Me(6)[14]dieneN(4))X(+), (X = Cl, Br, I). In the absence of the halides X(-), the electron-transfer reactions between Re(CO)(5) and these complexes are slow, k < 10(6) M(-1) s(-1). The results are discussed in terms of inner-sphere pathways, namely an atom-transfer-concerted mechanism. The mediation of bimetallic intermediates in the electron transfer is also considered.     

S-nitrosocysteine and cystine from reaction of cysteine with nitrous acid. A kinetic investigation

The formation of the S-nitrosocysteine (CySNO) in aqueous solution starting from cysteine (CySH) and sodium nitrite is shown to strongly depend on the pH. Experiments conducted within the pH range 0.5-7.0 show that at pH below 3.5 the NO+ (or H2NO 2 +) is the main nitrosating species, while at higher pH (>3.5) the nitrosating species is most likely the N2O3. A kinetic study provided a general kinetic equation, V(CySNO) = k1[HNO2][CySH]eq [H+] + k2[HNO2]2. The first term of this equation is predominant at pH lower than 3.5, in agreement with the literature for the direct nitrosation of thiols with nitrous acid; the value for the third-order rate constant, k(1) = 7.9 x 10(2) L(2) mol(-2) min(-1), was calculated. For experiments at pH higher than 3.5, the second term becomes prevalent and the second-order rate constant k(2) = (3.3 +/- 0.1) x 10(3) L mol(-1) min(-1) was calculated. A competitive oxidation process leading to the direct formation of cystine (CySSCy) has been also found. Most likely also for this process two different mechanisms are involved, depending on the pH, and a general kinetic equation, V(CySSCy) = k3[CySH](eq)[HNO2][H+] + k3'[CySH]eq[HNO2], is proposed.     

Lanthanide complexes of macrocyclic polyoxovanadates by VO4 units: synthesis, characterization, and structure elucidation by X-ray crystallography and EXAFS spectroscopy

Reactions of a tetravanadate anion, [V(4)O(12)](4-), with a series of lanthanide(III) salts yield three types of lanthanide complexes of macrocyclic polyoxovanadates: (Et(4)N)(6)[Ln(III)V(9)O(27)] [Ln = Nd (1), Sm (2), Eu (3), Gd (4), Tb (5), Dy (6)], (Et(4)N)(5)[(H(2)O)Ho(III)(V(4)O(12))(2)] (7), and (Et(4)N)(7)[Ln(III)V(10)O(30)] [Ln = Er (8), Tm (9), Yb (10), Lu (11)]. Lanthanide complexes 1-11 are isolated and characterized by IR, elemental analysis, single-crystal X-ray diffraction, and extended X-ray absorption fine structure spectroscopy (EXAFS). Lanthanide complexes 1-6 are composed of a square-antiprism eight-coordinated Ln(III) center with a macrocyclic polyoxovanadate that is constructed from nine VO(4) tetrahedra through vertex sharing. The structure of 7 is composed of a seven-coordinated Ho(III) center, which exhibits a capped trigonal-prism coordination environment by the sandwiching of two cyclic tetravanadates with a capping H(2)O ligand. Lanthanide complexes 8-11 have a six-coordinated Ln(III) center with a 10-membered vanadate ligand. The structural trend to adopt a larger coordination number for a larger lanthanide ion among the three types of structures is accompanied by a change in the vanadate ring sizes. These lanthanide complexes are examined by EXAFS spectroscopies on lanthanide L(III) absorption edges, and the EXAFS oscillations of each of the samples in the solid state and in acetonitrile are identical. The Ln-O and Ln···V bond lengths obtained from fits of the EXAFS data are consistent with the data from the single-crystal X-ray studies, reflecting retention of the structures in acetonitrile.     

Oxidation of catechin and rutin by pentaammineruthenium(III) complexes

The reaction of catechin and rutin with Ru(NH(3))(5)L(3+) (L = N-methylpyrazinium (pzCH(3)(+)), pyrazine (pz), and isonicotinamide (isn)) complexes underwent a two-electron oxidation on the catechol ring (B ring) with the formation of quinone products. The kinetics of the oxidation, carried out at [H(+)] = 0.01-1.0 M and pH = 4.0-7.6, suggested that the reaction process involves the rate determining one-electron oxidation of the flavonoids in the form of H(2)X (k(0)), HX(-) (k(1)), and X(2-) (k(2)) by Ru(NH(3))(5)L(3+) complexes to form the corresponding semiquinone radicals, followed by the rapid scavenge of the radicals by the Ru(III) complexes. The specific rate constants (k(0), k(1), and k(2)) were measured and the results together with the application of the Marcus theory were used to estimate the self-exchange parameters for the one-electron couples of the flavonoids, H(2)X/H(2)X(+*), HX(-)/HX(*), and X(2-)/X(-*).     

S-oxygenation of thiocarbamides I: Oxidation of phenylthiourea by chlorite in acidic media

The oxidation of 1-phenyl-2-thiourea (PTU) by chlorite was studied in aqueous acidic media. The reaction is extremely complex with reaction dynamics strongly influenced by the pH of reaction medium. In excess chlorite concentrations the reaction stoichiometry involves the complete desulfurization of PTU to yield a urea residue and sulfate: 2ClO2- + PhN(H)CSNH2 + H2O --> SO4(2-) + PhN(H)CONH2 + 2Cl- + 2H+. In excess PTU, mixtures of sulfinic and sulfonic acids are formed. The reaction was followed spectrophotometrically by observing the formation of chlorine dioxide which is formed from the reaction of the reactive intermediate HOCl and chlorite: 2ClO2- + HOCl + H+ --> 2ClO2(aq) + Cl- + H2O. The complexity of the ClO2- - PTU reaction arises from the fact that the reaction of ClO2 with PTU is slow enough to allow the accumulation of ClO2 in the presence of PTU. Hence the formation of ClO2 was observed to be oligooscillatory with transient formation of ClO2 even in conditions of excess oxidant. The reaction showed complex acid dependence with acid catalysis in pH conditions higher than pKa of HClO2 and acid retardation in pH conditions of less than 2.0. The rate of oxidation of PTU was given by -d[PTU]/dt = k1[ClO2-][PTU] + k2[HClO2][PTU] with the rate law: -d[PTU]/dt = [Cl(III)](T)[PTU]0/K(a1) + [H+] [k1K(a1) + k2[H+]]; where [Cl(III)]T is the sum of chlorite and chlorous acid and K(a1) is the acid dissociation constant for chlorous acid. The following bimolecular rate constants were evaluated; k1 = 31.5+/-2.3 M(-1) s(-1) and k2 = 114+/-7 M(-1) s(-1). The direct reaction of ClO2 with PTU was autocatalytic in low acid concentrations with a stoichiometric ratio of 8:5; 8ClO2 + 5PhN(H)CSNH2 + 9H2O --> 5SO4(2-) + 5PhN(H)CONH2 + 8Cl- + 18H+. The proposed mechanism implicates HOCl as a major intermediate whose autocatalytic production determined the observed global dynamics of the reaction. A comprehensive 29-reaction scheme is evoked to describe the complex reaction dynamics.     

Family of carboxylate- and nitrate-diphenoxo triply bridged dinuclear Ni(II)Ln(III) complexes (Ln = Eu, Gd, Tb, Ho, Er, Y): synthesis, experimental and theoretical magneto-structural studies, and single-molecule magnet behavior

Seven acetate-diphenoxo triply bridged M(II)-Ln(III) complexes (M(II) = Ni(II) and Ln(III) = Gd, Tb, Ho, Er, and Y; M(II) = Zn(II) and Ln(III) = Ho(III) and Er(III)) of formula [M(μ-L)(μ-OAc)Ln(NO(3))(2)], one nitrate-diphenoxo triply bridged Ni(II)-Tb(III) complex, [Ni(μ-L)(μ-NO(3))Tb(NO(3))(2)]·2CH(3)OH, and two diphenoxo doubly bridged Ni(II)-Ln(III) complexes (Ln(III) = Eu, Gd) of formula [Ni(H(2)O)(μ-L)Ln(NO(3))(3)]·2CH(3)OH have been prepared in one pot reaction from the compartmental ligand N,N',N"-trimethyl-N,N"-bis(2-hydroxy-3-methoxy-5-methylbenzyl)diethylenetriamine (H(2)L). Moreover, Ni(II)-Ln(III) complexes bearing benzoate or 9-anthracenecarboxylate bridging groups of formula [Ni(μ-L)(μ-BzO)Dy(NO(3))(2)] and [Ni(μ-L)(μ-9-An)Dy(9-An)(NO(3))(2)]·3CH(3)CN have also been successfully synthesized. In acetate-diphenoxo triply bridged complexes, the acetate bridging group forces the structure to be folded with an average hinge angle in the M(μ-O(2))Ln bridging fragment of ~22°, whereas nitrate-diphenoxo doubly bridged complexes and diphenoxo-doubly bridged complexes exhibit more planar structures with hinge angles of ~13° and ~2°, respectively. All Ni(II)-Ln(III) complexes exhibit ferromagnetic interactions between Ni(II) and Ln(III) ions and, in the case of the Gd(III) complexes, the J(NiGd) coupling increases weakly but significantly with the planarity of the M-(O)(2)-Gd bridging fragment and with the increase of the Ni-O-Gd angle. Density functional theory (DFT) theoretical calculations on the Ni(II)Gd(III) complexes and model compounds support these magneto-structural correlations as well as the experimental J(NiGd) values, which were found to be ~1.38 and ~2.1 cm(-1) for the folded [Ni(μ-L)(μ-OAc)Gd(NO(3))(2)] and planar [Ni(H(2)O)(μ-L)Gd(NO(3))(3)]·2CH(3)OH complexes, respectively. The Ni(II)Dy(III) complexes exhibit slow relaxation of the magnetization with Δ/k(B) energy barriers under 1000 Oe applied magnetic fields of 9.2 and 10.1 K for [Ni(μ-L)(μ-BzO)Dy(NO(3))(2)] and [Ni(μ-L)(μ-9-An)Dy(9-An)(NO(3))(2)]·3CH(3)CN, respectively.     

Monopropionate analogues of DOTA4- and DTPA5-: kinetics of formation and dissociation of their lanthanide(III) complexes

The replacement of an acetate function of the macrocyclic DOTA4-(DO3A-Nprop4-) or the acyclic DTPA5- in terminal position (DTTA-Nprop5-) has been recently shown to result in a significant increase of the water exchange rate on the Gd3+ complexes, which makes these chelates potential contrast agents for MRI applications. Here, two novel and straightforward synthetic routes to H4DO3A-Nprop are described. Protonation constants of DO3A-Nprop4- and stability constants with several alkaline earth and transition metal ions have been determined by potentiometry. For each metal, the thermodynamic stability constant is decreased in comparison to the DOTA chelates. The formation reaction of LnDO3A-Nprop- complexes (Ln=Ce, Gd and Yb) proceeds via the rapid formation of a diprotonated intermediate and its subsequent deprotonation and rearrangement in a slow, OH- catalyzed process. The stability of the LnH2DO3A-Nprop* intermediates is similar to those reported for the corresponding DOTA analogues. The rate constants of the OH- catalyzed deprotonation step increase with decreasing lanthanide ion size, and are slightly higher than for DOTA complexes. The kinetic inertness of GdDTTA-Nprop2- was characterized by the rates of its exchange reactions with Zn2+ and Eu3+. The rate of the reaction between GdDTTA-Nprop2- and Zn2+ increases with Zn2+ concentration, while it is independent of pH, implying that the exchange takes place predominantly via direct attack of the metal ion on the complex. In the Eu3+ exchange, the rate decreases with increasing concentration of the exchanging ion which is accounted for by the transitional formation of a dinuclear GdDTTA-NpropEu+ species. The kinetic inertness of the monopropionate GdDTTA-Nprop2- is decreased in comparison to GdDTPA2-: all rate constants, characterizing the dissociation reaction via either proton- or metal-catalyzed pathways being higher by 1-2 orders of magnitude. Similarly, a study of the acid-catalyzed dissociation of the macrocyclic CeDO3A-Nprop- showed a partial loss of the kinetic inertness with regard to the tetraacetate derivative CeDOTA-.     

Kinetic evidence for intramolecular proton transfer between nickel and coordinated thiolate

The complexes [Ni(YR)(triphos)]BPh(4) (Y = S, R = Ph or Et or Y = Se, R = Ph; triphos = (Ph(2)PCH(2)CH(2))(2)PPh) have been prepared and characterized, and the X-ray crystal structure of [Ni(SPh)(triphos)]BPh(4) has been solved. In MeCN, [Ni(YR)(triphos)](+) are protonated by [lutH](+) (lut = 2,6-dimethylpyridine) to give [Ni(YHR)(triphos)](2+). Studies on the kinetics of these equilibrium reactions reveal an unexpected difference in the reactivities of [Ni(SPh)(triphos)](+) and [Ni(SEt)(triphos)](+). In both cases, the reactions exhibit a first-order dependence on the concentration of complex. When R = Ph, the dependence on the concentrations of [lutH(+)] and lut is given by k(obs) = k(1)(Ph)[lutH(+)] + k(-1)(Ph)[lut], which is typical of an equilibrium reaction where k(1)(Ph) and k(-1)(Ph) correspond to the forward and back reactions, respectively. Analogous behavior is observed for [Ni(SePh)(triphos)](+). However, for [Ni(SEt)(triphos)](+), the kinetics are more complicated, and k(obs) = (k(1)k(2)[lutH(+)] + (k(-2) + k(2)))/(k(1)[lutH(+)] + k(-1)[lut]), which is indicative of a mechanism involving two coupled equilibria in which the initial protonation of the thiolate is followed by a unimolecular equilibrium reaction that is assumed to involve the formation of an eta(2)-EtS-H ligand. The difference in reactivity between the complexes with alkyl and aryl thiolate ligands is a consequence of the (Ni(triphos))(2+) site "leveling" the basicities of these ligands. The pK(a)'s of the PhSH and EtSH constituents coordinated to the (Ni(triphos))(2+) are 16.0 and 14.6, respectively, whereas the difference in pK(a)'s of free PhSH and EtSH differ by ca. 4 units. The pK(a) of [Ni(SeHPh)(triphos)](+) is 14.4. The more strongly sigma-donating EtS ligand makes the (Ni(triphos))(2+) core sufficiently electron-rich that the basicities of the sulfur and nickel in [Ni(SEt)(triphos)](+) are very similar; therefore, the proton serves as a bridge between the two sites. The relevance of these observations to the proposed mechanisms of nickel-based hydrogenases is discussed.