2D Selective‐TOCSY‐DQFCOSY Experiment for Identification of Individual Sugar Components in Oligosaccharides

In this paper, we describe an improved 2D selective‐TOCSY‐COSY experiment for the unambiguous assignment of an individual sugar component in oligosaccharides. We used a DQFCOSY with a pulsed‐field gradient instead of a conventional COSY in this improved experiment. The network of proton signals for a selected sugar in an oligosaccharide is observed as the diagonal peaks in the 2D spectrum by use of the first TOCSY period, and the correlation signals between J‐coupled neighboring protons are clearly observed as the cross peak, including the signals observed close to the diagonal peaks by the second DQFCOSY development. Even when the signals do not appear in a well‐separated form of a 1D spectrum, unambiguous sequential assignment of the proton signals of individual sugar components in an oligosaccharide is achieved by this method.     

Measurement of long‐range proton–carbon coupling constants from pure in‐phase 1D multiplets

The SELective INverse detection of carbon–proton CORrelation pulse sequence that yields a 1D spectrum of a proton directly bonded to a selected carbon resonance has been converted into a proton and carbon double‐selective variant that provides a ¹H spectrum of a selected proton that is long‐range coupled to a specific carbon resonance. The resulting 1D proton multiplet exhibits a pure absorptive in‐phase lineshape for precise measurement of specific long‐range proton–carbon coupling constants in small organic molecules at natural abundance. Copyright © 2011 John Wiley & Sons, Ltd.     

J‐Edited Pure Shift NMR for the Facile Measurement of nJHH for Specific Protons

We report a novel 1D J‐edited pure shift NMR experiment (J‐PSHIFT) that was constructed from a pseudo 2D experiment for the direct measurement of proton–proton scalar couplings. The experiment gives homonuclear broad‐band ¹H‐decoupled ¹H NMR spectra, which provide a single peak for chemically distinct protons, and only retain the homonuclear‐scalar‐coupled doublet pattern at the chemical‐shift positions of the protons in the coupled network of a specific proton. This permits the direct and unambiguous measurement of the magnitudes of the couplings. The incorporation of a 1D selective correlation spectroscopy (COSY)/ total correlation spectroscopy (TOCSY) block in lieu of the initial selective pulse, results in the exclusive detection of the correlated spectrum of a specific proton.     

Application of a 1H δ‐resolved 2D NMR experiment to the visualization of enantiomers in chiral environment,using sample spatial encoding and selective echoes

We present the application of a 2D broadband homodecoupled proton NMR experiment to the visualization of enantiomers. In a chiral environment, the existence of diastereoisomeric intermolecular interactions can yield—generally slight—variations of proton chemical shifts from one enantiomer to another. We show that this approach, which relies on a spatial encoding of the NMR sample, is particularly well suited to the analysis of enantiomeric mixtures, since it allows, within one single 2D experiment, to detect subtle chemical shift differences between enantiomers, even in the presence of several couplings. This sequence, which uses semiselective radio‐frequency (rf) pulses combined to a z‐field gradient pulse, produces different selective echoes in various parts of the sample. The resulting homonuclear decoupling provides an original δ‐resolved spectrum along the diagonal of the 2D map where it becomes possible to probe the chiral differentiation process through every proton site where the resulting variation in the chemical shift is detectable. We discuss the advantages and drawbacks of this approach, regarding other experiments which provide homodecoupled proton spectra. This methodology is applied to the observation of enantiomers of (1) ( ± )2‐methyl‐isoborneol coordinated to europium (III) tris[3‐(trifluoromethyl‐hydroxymethylene)‐(+)‐camphorate] in isotropic solution, and (2) ( ± )3‐butyn‐2‐ol dissolved in a chiral liquid‐crystal solvent, in order to show the robustness of this pulse sequence for a wide range of chiral samples. Copyright © 2009 John Wiley & Sons, Ltd.     

Spectroscopic separation of 13C NMR spectra of complex isomeric mixtures by the CSSF‐TOCSY‐INEPT experiment

Isomeric mixtures from synthetic or natural origins can pose fundamental challenges for their chromatographic separation and spectroscopic identification. A novel 1D selective NMR experiment, chemical shift selective filter (CSSF)‐TOCSY‐INEPT, is presented that allows the extraction of ¹³C NMR subspectra of discrete isomers in complex mixtures without physical separation. This is achieved via CSS excitation of proton signals in the ¹H NMR mixture spectrum, propagation of the selectivity by polarization transfer within coupled ¹H spins, and subsequent relaying of the magnetization from ¹H to ¹³C by direct INEPT transfer to generate ¹³C NMR subspectra. Simple consolidation of the subspectra yields ¹³C NMR spectra for individual isomers. Alternatively, CSSF‐INEPT with heteronuclear long‐range transfer can correlate the isolated networks of coupled spins and therefore facilitate the reconstruction of the ¹³C NMR spectra for isomers containing multiple spin systems. A proof‐of‐principle validation of the CSSF‐TOCSY‐INEPT experiment is demonstrated on three mixtures with different spectral and structural complexities. The results show that CSSF‐TOCSY‐INEPT is a versatile, powerful tool for deconvoluting isomeric mixtures within the NMR tube with unprecedented resolution and offers unique, unambiguous spectral information for structure elucidation. Copyright © 2014 John Wiley & Sons, Ltd.     

Accurate measurement of JHH in overlapped signals by a TOCSY‐edited SERF Experiment

Selective refocusing (GSERF or the recent PSYCHEDELIC) experiments were originally designed to determine all proton–proton coupling constants (J_HH) for a selected proton resonance. They work for isolated signals on which selective excitation can be successfully applied but, as it happens in other selective experiments, fail for overlapped signals. To circumvent this limitation, a doubly‐selective TOCSY‐GSERF scheme is presented for the measurement of J_HH in protons resonating in crowded regions. This new experiment takes advantage of the editing features of an initial TOCSY transfer to uncover hidden resonances that become accessible to perform the subsequent frequency‐selective refocusing. Copyright © 2016 John Wiley & Sons, Ltd.     

Application of the randomly optimized RDSQC experiment for the elucidation of an unknown compound

The application of the randomly optimized RDSQC (Randomly optimized Direct correlation Single Quantum Coherence) experiment for the detection of direct correlations facilitated the characterization of an unknown compound. The expected structure consisted of purely aliphatic moieties. The actual, identified compound contained the desired structure plus an adenosine functionality with two protons whose direct proton‐carbon couplings were over 200 Hz. Application of a 130 Hz optimized direct heteronuclear GHSQC experiment afforded no correlations for the adenine responses. The RDSQC experiment allowed for the simultaneous optimization of multiple couplings in a range of 130 to 220 Hz producing a direct correlation spectrum with all the expected responses.     

Quantitative reproducibility of mass spectra in matrix‐assisted laser desorption ionization and unraveling of the mechanism for gas‐phase peptide ion formation

In a previous study on matrix‐assisted laser desorption ionization (MALDI) of peptides using α‐cyano‐4‐hydroxycinnamic acid (CHCA) as a matrix, we found that the patterns of single‐shot spectra obtained under different experimental conditions became similar upon temperature selection. In this paper, we report that absolute ion abundances are also similar in temperature‐selected MALDI spectra, even when laser fluence is varied. The result that has been obtained using CHCA and 2,5‐dihydroxybenzoic acid as matrices is in disagreement with the hypothesis of laser‐induced ionization of matrix as the mechanism for primary ion formation in MALDI. We also report that the total number of ions in such a spectrum is unaffected by the identity, concentration and number of analytes, i.e. it is the same as that in the spectrum of pure matrix. We propose that the generation of gas‐phase ions in MALDI can be explained in terms of two thermal reactions, i.e. the autoprotolysis of matrix molecules and the matrix‐to‐analyte proton transfer, both of which are in quasi‐equilibrium in the early matrix plume. Copyright © 2013 John Wiley & Sons, Ltd.     

Heteronuclear dipolar decoupling in liquid‐crystal NMR using supercycled SWf‐TPPM sequences

Heteronuclear dipolar decoupling is an essential requirement for extracting structural information from the ¹³C NMR spectra of liquid crystals. Efficient schemes for heteronuclear dipolar decoupling in such systems are formulated here by supercycling SW_f‐TPPM, a sequence introduced recently for this purpose in rotating solids. These sequences are compared with two other commonly used decoupling schemes in liquid‐crystal NMR, SPINAL‐64 and SW_f‐TPPM, by analyzing the intensities of various resonances in the proton decoupled ¹³C spectrum of the liquid‐crystal 4‐n‐pentyl‐4′‐cyanobiphenyl (5CB). The effectiveness of the decoupling programs with respect to experimental parameters such as RF field strength, decoupler offset frequency and phase angle is also presented. Copyright © 2010 John Wiley & Sons, Ltd.     

Does Excited‐State Proton‐Transfer Reaction Contribute to the Emission Behaviour of 4‐Aminophthalimide in Aqueous Media?

4‐Aminophthalimide (AP) is an extensively used molecule both for fundamental studies and applications primarily due to its highly solvent‐sensitive fluorescence properties. The fluorescence spectrum of AP in aqueous media was recently shown to be dependent on the excitation wavelength. A time‐dependent blue shift of its emission spectrum is also reported. On the basis of these findings, the excited‐state solvent‐mediated proton‐transfer reaction of the molecule, which was proposed once but discarded at a later stage, is reintroduced. We report on the fluorescence behaviour of AP and its imide‐H protected derivative, N‐BuAP, to prove that a solvent‐assisted excited‐state keto–enol transformation does not contribute to the steady‐state and time‐resolved emission behaviour of AP in aqueous media. Our results also reveal that the fluorescence of AP in aqueous media arises from two distinct hydrogen‐bonded species. The deuterium isotope effect on the fluorescence quantum yield and lifetime of AP, which was thought to be a reflection of the excited‐state proton‐transfer reaction in the system, is explained by considering the difference in the influence of H₂O and D₂O on the nonradiative rates and ground‐state exchange of the proton with the solvent.     

UV‐Light‐Induced Hydrogen Transfer in Guanosine–Guanosine Aggregates

Aggregates of a lipophilic guanine (G) derivative have been studied in n‐hexane by femtosecond‐to‐microsecond UV‐visible broadband transient absorption, stationary infrared and UV‐visible spectroscopy and by quantum chemical calculations. We report the first time‐resolved spectroscopic detection of hydrogen transfer in GG aggregates, which leads to (G?H) ^. radicals by means of G⁺G^? charge transfer followed by proton transfer. These radicals show a characteristic electronic spectrum in the range 300–550 nm. The calculated superimposed spectrum of the species that result from NH???N proton transfer agrees best with the experimental spectrum.     

Analysis and elimination of artifacts in indirect covariance NMR spectra via unsymmetrical processing

Indirect covariance NMR offers an alternative method of extracting spin-spin connectivity information via the conversion of an indirect-detection heteronuclear shift-correlation data matrix to a homonuclear data matrix. Using an IDR (inverted direct response)-HSQC-TOCSY spectrum as a starting point for the indirect covariance processing, a spectrum that can be described as a carbon-carbon COSY experiment is obtained. These data are analogous to the autocorrelated 13C-13C double quantum INADEQUATE experiment except that the indirect covariance NMR spectrum establishes carbon-carbon connectivities only between contiguous protonated carbons. Cyclopentafuranone and the complex polynuclear heteroaromatic naphtho[2',1':5,6]-naphtho[2',1':4,5]thieno[2,3-c]quinoline are used as model compounds. The former is a straightforward example because of its well-resolved proton spectrum, while the latter, which has considerable resonance overlap in its congested proton spectrum, gives rise to two types of artifact responses that must be considered when using the indirect covariance NMR method.     

Combined application of auto-correlated (COSY) and homonuclear J-resolved two-dimensional NMR spectra for the assignment of congested,non-first order spectra of polycyclic aromatic systems. Assignment of the 1H-NMR spectrum of benzo[2,3]phenanthro-[4,5-bcd]thiophene and an investigation of long range 1H-1H spin-coupling constants

Total assignment of the proton nmr spectrum of benzo[2,3]phenanthro[4,5-bcd]thiophene at 200 MHz is reported. Preliminary identification of the resonances comprising the individual spin Systems was accomplished by the use of auto-correlated two-dimensional proton nmr spectroscopy (COSY). Individual assignments were made on the basis of spin-coupling information which was obtained from the “titled” two-dimensional J-resolved (2DJ) proton nmr spectrum of the title compound. Because of the greater resolving power of the latter experiment relative to conventional proton nmr spectroscopy, a number of long range inter-ring spincouplings were observed. The observation of these long range couplings was crucial to the final assignment of several of the resonances in the spectrum. Resonances due to strong coupling in the 2DJ spectrum were also shown to be a useful means of correlating strongly coupled spins which provides an alternative to the COSY spectrum for this purpose.     

Studying Intrinsically Disordered Proteins under True In Vivo Conditions by Combined Cross‐Polarization and Carbonyl‐Detection NMR Spectroscopy

Under physiological conditions, studies of intrinsically disordered proteins (IDPs) by conventional NMR methods based on proton detection are severely limited by fast amide‐proton exchange with water. ¹³C detection has been proposed as a solution to the exchange problem, but is hampered by low sensitivity. We propose a new pulse sequence combining proton–nitrogen cross‐polarization and carbonyl detection to record high‐resolution, high‐sensitivity NMR spectra of IDPs under physiological conditions. To demonstrate the efficacy of this approach, we recorded a high‐quality N–CO correlation spectrum of α‐synuclein in bacterial cells at 37 °C.     

Characterization of signals in the solution 1H NMR spectrum of poly(isobutylene‐co‐p‐methylstyrene) and their utility

Poly(isobutylene‐co‐p‐methylstyrene) is an important precursor to Exxpro™ elastomers. A previous report detailed the characterization of both the proton and the carbon NMR spectra of the copolymer. 1 However, several resonances in the proton NMR spectrum of the copolymer were not assigned. Specifically, the proton methine resonance of the BSB triad sequence is now identified and used to calculate BSB triad contribution to the copolymer microstructure. This report describes the assignment of this resonance and other resonances associated with microstructural sequence distribution around p‐methylstyrene. The proton NMR signals of interest resonate at 2.8 ppm and 2.5 ppm in a typical spectrum for poly(isobutylene‐co‐p‐methylstyrene). The nature of these resonances were determined by preparation and characterization of specifically deuterated poly(isobutylene‐co‐p‐methylstyrene)s employing both one and two dimensional NMR techniques. The 2.8 ppm signal is assigned as the methine proton of a p‐methylstyrene incorporated between two isobutylene units (the BSB triad). The signal at 2.5 ppm is assigned to the meso‐BSS triad. Determination of these resonances allows for rapid evaluation of isolated p‐methylstyrene units (BSB triads) present in the copolymer using only ¹H NMR. The utility of this technique is demonstrated by comparing BSB triad values determined by ¹H and ¹³C NMR analysis. © 2000 John Wiley & Sons, Inc. J Polym Sci A: Polym Chem 38: 1680–1686, 2000     

The proton spectrum including 13C-satellites of π-benzenechromium tricarbonyl in a nematic solvent

The proton spectrum of π-benzenechromium tricarbonyl with ¹³C-satellites due to ring- and carbonyl-carbons at natural abundance has been investigated in a nematic solvent. The structural data are found to be in agreement with those from electron and neutron diffraction measurements. The proton–proton indirect coupling constants have also been determined.     

Long‐Range Electrostatics‐Induced Two‐Proton Transfer Captured by Neutron Crystallography in an Enzyme Catalytic Site

Neutron crystallography was used to directly locate two protons before and after a pH‐induced two‐proton transfer between catalytic aspartic acid residues and the hydroxy group of the bound clinical drug darunavir, located in the catalytic site of enzyme HIV‐1 protease. The two‐proton transfer is triggered by electrostatic effects arising from protonation state changes of surface residues far from the active site. The mechanism and pH effect are supported by quantum mechanics/molecular mechanics (QM/MM) calculations. The low‐pH proton configuration in the catalytic site is deemed critical for the catalytic action of this enzyme and may apply more generally to other aspartic proteases. Neutrons therefore represent a superb probe to obtain structural details for proton transfer reactions in biological systems at a truly atomic level.     

Frequency‐Switched Single‐Transition Cross‐Polarization: A Tool for Selective Experiments in Biomolecular NMR

Frequency‐switched single‐transition cross‐polarization (FS‐ST‐CP) provides a versatile tool for selective coherence transfer in heteronuclear NMR of biomolecules such as proteins and nucleic acids. This type of coherence transfer is spin‐state‐selective and can therefore benefit from the extension of the life‐times of selected coherences due to partial cancellation of interfering relaxation mechanisms. The limits of the selectivity of the transfer are discussed by theory and illustrated by experiment. The methods are particularly efficient to obtain quantitative structural and dynamic information for selected residues in medium‐sized nitrogen‐15 or carbon‐13 labeled macromolecules.     

Proton dissociation and transfer in hydrated phosphoric acid clusters

The dynamics and mechanisms of proton dissociation and transfer in hydrated phosphoric acid (H₃PO₄) clusters under excess proton conditions were studied based on the concept of presolvation using the H₃PO₄–H₃O⁺–nH₂O complexes (n = 1–3) as the model systems and ab initio calculations and Born–Oppenheimer molecular dynamics (BOMD) simulations at the RIMP2/TZVP level as model calculations. The static results showed that the smallest, most stable intermediate complex for proton dissociation (n = 1) is formed in a low local‐dielectric constant environment (e.g., ε = 1), whereas proton transfer from the first to the second hydration shell is driven by fluctuations in the number of water molecules in a high local‐dielectric constant environment (e.g., ε = 78) through the Zundel complex in a linear H‐bond chain (n = 3). The two‐dimensional potential energy surfaces (2D‐PES) of the intermediate complex (n = 1) suggested three characteristic vibrational and ¹H NMR frequencies associated with a proton moving on the oscillatory shuttling and structural diffusion paths, which can be used to monitor the dynamics of proton dissociation in the H‐bond clusters. The BOMD simulations over the temperature range of 298–430 K validated the proposed proton dissociation and transfer mechanisms by showing that good agreement between the theoretical and experimental data can be achieved with the proposed rate‐determining processes. The theoretical results suggest the roles played by the polar solvent and iterate that insights into the dynamics and mechanisms of proton transfer in the protonated H‐bond clusters can be obtained from intermediate complexes provided that an appropriate presolvation model is selected and that all of the important rate‐determining processes are included in the model calculations. © 2015 Wiley Periodicals, Inc.