Magnitude and origin of the attraction and directionality of the halogen bonds of the complexes of C6F5X and C6H5X (X = I, Br, Cl and F) with pyridine

The geometries and interaction energies of complexes of pyridine with C₆F₅X, C₆H₅X (X=I, Br, Cl, F and H) and R_FI (R_F=CF₃, C₂F₅ and C₃F₇) have been studied by ab initio molecular orbital calculations. The CCSD(T) interaction energies (E_int) for the C₆F₅X–pyridine (X=I, Br, Cl, F and H) complexes at the basis set limit were estimated to be ?5.59, ?4.06, ?2.78, ?0.19 and ?4.37 kcal mol^?1, respectively, whereas the E_int values for the C₆H₅X–pyridine (X=I, Br, Cl and H) complexes were estimated to be ?3.27, ?2.17, ?1.23 and ?1.78 kcal mol^?1, respectively. Electrostatic interactions are the cause of the halogen dependence of the interaction energies and the enhancement of the attraction by the fluorine atoms in C₆F₅X. The values of E_int estimated for the R_FI–pyridine (R_F=CF₃, C₂F₅ and C₃F₇) complexes (?5.14, ?5.38 and ?5.44 kcal mol^?1, respectively) are close to that for the C₆F₅I–pyridine complex. Electrostatic interactions are the major source of the attraction in the strong halogen bond although induction and dispersion interactions also contribute to the attraction. Short‐range (charge‐transfer) interactions do not contribute significantly to the attraction. The magnitude of the directionality of the halogen bond correlates with the magnitude of the attraction. Electrostatic interactions are mainly responsible for the directionality of the halogen bond. The directionality of halogen bonds involving iodine and bromine is high, whereas that of chlorine is low and that of fluorine is negligible. The directionality of the halogen bonds in the C₆F₅I– and C₂F₅I–pyridine complexes is higher than that in the hydrogen bonds in the water dimer and water–formaldehyde complex. The calculations suggest that the C? I and C? Br halogen bonds play an important role in controlling the structures of molecular assemblies, that the C? Cl bonds play a less important role and that C? F bonds have a negligible impact.     

Building a Better Halide Receptor: Optimum Choice of Spacer,Binding Unit,and Halosubstitution

Quantum calculations are used to measure the binding of halides to a number of bipodal dicationic receptors, constructed as a pair of binding units separated by a spacer group. A number of variations are studied. A H atom on each binding unit (imidazolium or triazolium) is replaced by Br or I. Benzene, thiophene, carbazole, and dimethylnaphthalene are considered as spacer groups. Each receptor is paired with halides F^?, Cl^?, Br^?, and I^?. Substitution with I on the binding unit yields a large enhancement of binding, as much as 13 orders of magnitude; a much smaller increase occurs for substitution with Br. Imidazolium is a more effective binding agent than is triazolium. Benzene and dimethylnaphthalene represent the best spacers, followed by thiophene and carbazole. F^? binds much more strongly than do the other halides, which obey the order Cl^?>Br^?>I^?.     

Hydrogen Bonds Dictate the Coordination Geometry of Copper: Characterization of a Square‐Planar Copper(I) Complex

6,6′′‐Bis(2,4,6‐trimethylanilido)terpyridine (H₂Tpy^NMes) was prepared as a rigid, tridentate pincer ligand containing pendent anilines as hydrogen bond donor groups in the secondary coordination sphere. The coordination geometry of (H₂Tpy^NMes)copper(I)‐halide (Cl, Br and I) complexes is dictated by the strength of the NH–halide hydrogen bond. The Cu^ICl and Cu^IICl complexes are nearly isostructural, the former presenting a highly unusual square‐planar geometry about Cu^I. The geometric constraints provided by secondary interactions are reminiscent of blue copper proteins where a constrained geometry, or entatic state, allows for extremely rapid Cu^I/Cu^II electron‐transfer self‐exchange rates. Cu(H₂Tpy^NMes)Cl shows similar fast electron transfer (≈10⁵ m ^?1 s^?1) which is the same order of magnitude as biological systems.     

Density functional theory study of the free and tetraprotonated spheroidal macrotricyclic ligands and the complexes with halide anions: F−, Cl−, Br−

Theoretical studies of the macrotricyclic tetramine hexaether (SC), its tetraprotonated form SC‐4H⁺, and the corresponding complexes X^??SC‐4H⁺ (This expression represents the structural properties of the halide inclusion complex formed though the free ligand SC‐4H⁺ and the halide anion X^?: the spherical halide anion X^? is held by a tetrahedral array of ⁺N? H ··· X^? hydrogen bonds inside the intramolecular cavity of the tetraprotonated form SC‐4H⁺) of SC‐4H⁺ with the halide anions: F^?, Cl^?, and Br^? have been performed using density functional theory (DFT) with B3LYP/6‐31G method implemented in the Gaussian 03 program package. The optimized geometric structures obtained from DFT calculations are used to perform Natural Bond Orbital (NBO) analysis. The three main types of hydrogen bonds ⁺N? H ··· F^?, ⁺N? H ··· Cl^?, and ⁺N? H ··· Br^? are investigated. The results indicate that hydrogen bonding interactions are dominant and the halide anions: F^?, Cl^?, and Br^? offer lone pair electrons to the contacting σ* (N? H) antibond orbital of SC‐4H⁺. For all the structures, the most pronounced changes in geometric parameters upon interaction are observed in the proton‐donor molecule. The intermolecular interaction energies are predicted by using B3LYP/6‐31G methods with basis set superposition error (BSSE) and zero‐point energy (ZPE) correction. © 2009 Wiley Periodicals, Inc. J Comput Chem, 2010     

DFT Study of the Geometrical and Electronic Structures of Geminal Dicationic Ionic Liquids 1,3‐Bis[3‐methylimidazolium‐1‐yl]hexane Halides

In this work, the geometrical and electronic properties of the mono cationic ionic liquid 1‐hexyl‐3‐methylimidazolium halides ([C₆(mim)]⁺_X^?, X=Cl, Br and I) and dicationic ionic liquid 1,3‐bis[3‐methylimidazolium‐1‐yl]hexane halides ([C₆(mim)₂X₂], X=Cl, Br and I) were studied using the density functional theory (DFT). The most stable conformer of these two types ionic liquids (IL) are determined and compared with each other. Results show that in the most stable conformers, in both monocationic ILs and dicationic ILs, the Cl^? and Br^? anions prefer to locate almost in the plane of the imidazolium ring whereas the I^? anion prefers nearly vertical location respect to the imidazolium ring plan. Comparison of hydrogen bonding and ionic interactions in these two types of ionic liquids reveals that these ionic liquids can be formed hydrogen bond by Cl^? and Br^? anion. The calculated thermodynamic functions show that the interaction of cation — anion pair in the dicationic ionic liquids are more than monocationic ionic liquids and these interactions decrease with increasing the halide anion atomic weight.     

Effect of Hydrogen Binding on Selective Recognition of Halide Anions

The interplay of molecular rigidity enforced by interior or exterior hydrogen bonding and affinity for binding halide anions is described to demonstrate the effect of intramolecular hydrogen bonding in anion recognition process. To this end pyridine‐2,6‐dicarboxamides 1 and 2 , and aromatic oligoamides 3 and 4 containing intramolecular hydrogen bonds were explored for their ability in associating with tetrabutylammonium halide (Cl^?, Br^?, and I^?). Binding constants in chloroform solution were calculated using nonlinear curve‐fitting method based on ¹H NMR titration experiments. The trimeric amide 3 , which adopts a crescent conformation as revealed by single‐crystal X‐ray diffraction analysis, strongly binds chloride anion with binding constant as high as 379 L·mol^?1. This is more than 6 times greater than the binding constant for the control receptor 2 with a backbone that is only partially rigidified. The comparative data provided supportive information for rationalizing the observed affinity difference in binding halide anions in terms of local preorganization effected by interior or exterior hydrogen bonding.     

Synthesis of halide anion‐doped bismuth terephthalate hybrids for organic pollutant removal

Halide anion‐doped bismuth terephthalate hybrids were synthesized using a facile solvothermal method. Four series of hybrids doped with halide anions X^? (F^?, Cl^?, Br^? and I^?) were produced by varying the molar ratios (n) of X^? relative to Bi(NO₃)₃ (n = 0.25, 0.5, 0.75 and 1) in dimethylformamide solution. The results indicated that 0.25 equiv. of different halide anion‐doped bismuth terephthalate hybrids, especially BiBDC‐Cl(0.25) and BiBDC‐Br(0.25), exhibited excellent photocatalytic activity under visible light and UV light irradiation. They also exhibited excellent adsorption performance for Rhodamine B which could be attributed to high surface areas and negative charge on the surface of the catalysts. Moreover, the degradation of Rhodamine B under visible light irradiation is a photosensitization process and ^?O₂^? is the most important active species. The halide anion‐doped bismuth terephthalate hybrids are promising photocatalysts for removal of organic pollutants. Copyright © 2016 John Wiley & Sons, Ltd.     

Phosphoniumsalze mit Hydrogendihalogenidanionen HCl2−, HBr2− Hl2− oder HBrCl−

Phosphonium Salts with Hydrogen Dihalide Anions HCl₂^?, HBr₂^?, HI₂^?, or HBrCl^? Phosphonium hydrogen dihalides [R₃PR′][XHY] (X = Y = Cl, Br, I; X = Br, Y = Cl) resp. [R₃PH]HBr₂ are obtained as extremely hydrolyzable crystals by reaction of phosphonium halides or tertiary phosphanes with hydrogen halide. According to IR spectroscopic results the solid compounds mostly contain anions [XHX]^? with symmetric hydrogen bonds. In solution ¹H NMR measurements show a slight (X = Cl, Br) or considerable (X = I) dissociation according to HX₂^? ? X^? + HX. On heating the solid compounds decompose with formation of hydrogen halide and [R₃PR′]X or [R₃PH]X. In this process the hydrogen bromidechlorides [R₃PR′][BrHCl] exclusively eliminate HCl. NMR studies (¹H und ³¹P) with solutions containing [R₃PH]HBr₂ (R = phenyl, 1-naphtyl) or HBr and Ph₃P in varying molar ratios show that a fast proton exchange between the competing Lewis bases R₃P and Br^? exists.     

High Compression‐Induced Conductivity in a Layered Cu–Br Perovskite

We show that the onset pressure for appreciable conductivity in layered copper‐halide perovskites can decrease by ca. 50 GPa upon replacement of Cl with Br. Layered Cu–Cl perovskites require pressures >50 GPa to show a conductivity of 10^?4 S cm^?1, whereas here a Cu–Br congener, (EA)₂CuBr₄ (EA=ethylammonium), exhibits conductivity as high as 2×10^?3 S cm^?1 at only 2.6 GPa, and 0.17 S cm^?1 at 59 GPa. Substitution of higher‐energy Br 4p for Cl 3p orbitals lowers the charge‐transfer band gap of the perovskite by 0.9 eV. This 1.7 eV band gap decreases to 0.3 eV at 65 GPa. High‐pressure X‐ray diffraction, optical absorption, and transport measurements, and density functional theory calculations allow us to track compression‐induced structural and electronic changes. The notable enhancement of the Br perovskite's electronic response to pressure may be attributed to more diffuse Br valence orbitals relative to Cl orbitals. This work brings the compression‐induced conductivity of Cu‐halide perovskites to more technologically accessible pressures.     

Density functional theory study on the reactions of X− with CH3SY (X,Y = F,Cl, Br,I)

Gas‐phase anionic reactions X^? + CH₃SY (X, Y = F, Cl, Br, I) have been investigated at the level of B3LYP/6‐311+G (2df,p). Results show that the potential energy surface (PES) of gas‐phase reactions X^? + CH₃SY (X, Y = Cl, Br, I) has a quadruple‐well structure, indicating an addition–elimination (A–E) pathway. The fluorine behaves differently in many respects from the other halogens and the reactions F^? + CH₃SY (Y = F, Cl, Br, I) correspond to deprotonation instead of substitution. The gas‐phase reactions X^? + CH₃SF (X = Cl, Br, I), however, follow an A–E pathway other than the last two out going steps (COM2 and PR) that proceeds via a deprotonation. The polarizable continuum model (PCM) has been used to evaluate the solvent effects on the energetics of the reactions X^? + CH₃SY (X, Y = Cl, Br, I). The PES is predicted to be unimodal in the solvents of high polarity. © 2007 Wiley Periodicals, Inc. Int J Quantum Chem, 2007     

Strong CH⋅⋅⋅Halide Hydrogen Bonds from 1,2,3‐Triazoles Quantified Using Pre‐Organized and Shape‐Persistent Triazolophanes

The structures associated with halide (F^?, Cl^?, Br^?) complexation inside CH hydrogen‐bonding macrocyclic receptors, called triazolophanes, are characterized using density functional theory (DFT). The associated binding energies in the gas and solution phases are evaluated. The ruffles in the empty triazolophane become smoothed‐out upon Cl^?‐ and Br^?‐ion binding directly into the middle of the cavity. The largely pre‐organized cavity morphs into an elliptical shape to facilitate shorter hydrogen bonds in the north and south regions and longer ones west and east. The smaller F^? ion sits in, and flattens‐out, only the north (or south) region. The 1,2,3‐triazoles show shorter CH???Cl^? contacts than for the phenylenes. Both Cl^? and Br^? show the same binding geometries but Cl^? has a larger binding energy consistent with its stronger Lewis basicity. Model triads were used to decompose the overall binding energy into those of its components. In the course of this triad analysis, anion polarization was identified and its contribution to the triad???Cl^? binding energy estimated. Consequently, the binding energies for the individual aryl units within the comparatively non‐polarized triazolophanes were estimated. The 1,2,3‐triazoles are twice as strong as the phenylenes thus contributing most of the interaction energy to Cl^?‐ion binding. Therefore, the 1,2,3‐triazoles appear to approach the hydrogen bond strengths of the NH donors of pyrrole units.     

Comparative study of the gas-phase bond strengths of CO2 and N2O with the halide ions

Thermodynamic data, ΔH _{n-1, n} ^o and ΔS _{n-1, n} ^o, for clustering reactions of halide ions X^?(X = F, Cl, Br, and I) with N₂Owere measured with a pulsed electron beam high-pressure mass spectrometer. In contrast to the fact that CO₂ forms a covalent bond with the fluoride ion to yield the fluoroformate ion, FCO₂ ^?, the interaction between F^? and N₂O is mainly electrostatic. It was found that the cluster ions F^? (N₂O)_n complete the first shell at n = 6, thus forming an octahedral structure. The difference between F—CO₂ ^? and F^? ... N₂O is discussed in terms of Coulombic, exchange, and charge-transfer interactions. The X^? (N₂O)₂ clusters (X = Cl, Br and I) are found to be of C_2h symmetry, while F^? (N₂O)₂ is of a twisted form and is slightly asymmetric due to a slight participation of covalency (charge transfer) in the core ion F^? ... N₂O.     

α‐Halogenoacetanilides as Hydrogen‐Bonding Organocatalysts that Activate Carbonyl Bonds: Fluorine versus Chlorine and Bromine

α‐Halogenoacetanilides (X=F, Cl, Br) were examined as H‐bonding organocatalysts designed for the double activation of C?O bonds through NH and CH donor groups. Depending on the halide substituents, the double H‐bond involved a nonconventional C?H???O interaction with either a H?CX_n (n=1–2, X=Cl, Br) or a H?C_Ar bond (X=F), as shown in the solid‐state crystal structures and by molecular modeling. In addition, the catalytic properties of α‐halogenoacetanilides were evaluated in the ring‐opening polymerization of lactide, in the presence of a tertiary amine as cocatalyst. The α‐dichloro‐ and α‐dibromoacetanilides containing electron‐deficient aromatic groups afforded the most attractive double H‐bonding properties towards C?O bonds, with a N?H???O???H?CX₂ interaction.     

Molecular Complexes of Simple Anions with Electron‐Deficient Arenes: Spectroscopic Evidence for Two Types of Structural Motifs for Anion–Arene Interactions

Anion–π interactions between a π‐acidic aromatic system and an anion are gaining increasing recognition in chemistry and biology. Herein, the binding features of an electron‐deficient aromatic system (1,3,5‐trinitrobenzene (TNB)) and selected anions (OH^?, Br^?, and I^?) are examined in the gas phase by using the combined information derived from collision‐induced dissociation experiments at variable energy, infrared multiple‐photon dissociation spectroscopy, and quantum chemical calculations. We provide spectroscopic evidence for two different structural motifs of anion–arene complexes depending on the nature of the anion. The TNB–OR^? complexes (R=H, or alkyl groups which were studied earlier) adopt an anionic σ‐complex structure whereby RO^? attacks the aromatic ring with covalent bond formation, and develops a tetrahedral ring carbon bound to H and OR. The halide complexes rather conform to a structure in which the TNB moiety is hardly altered, and the halogen is placed on an unsubstituted carbon atom over the periphery of the ring at a C–X distance that is appreciably longer than a typical covalent bond length. The ensuing structural motif, previously characterized in the solid state and named weak σ interaction, is now confirmed by an IR spectroscopic assay in the gas phase, in which the sampled species are unperturbed by crystal packing or solvation effects.     

Weak hydrogen and halogen bonding in 4‐[(2,2‐difluoroethoxy)methyl]pyridinium iodide and 4‐[(3‐chloro‐2,2,3,3‐tetrafluoropropoxy)methyl]pyridinium iodide

To enable a comparison between a C—H…X hydrogen bond and a halogen bond, the structures of two fluorous‐substituted pyridinium iodide salts have been determined. 4‐[(2,2‐Difluoroethoxy)methyl]pyridinium iodide, C₈H₁₀F₂NO⁺·I⁻, (1), has a –CH₂OCH₂CF₂H substituent at the para position of the pyridinium ring and 4‐[(3‐chloro‐2,2,3,3‐tetrafluoropropoxy)methyl]pyridinium iodide, C₉H₉ClF₄NO⁺·I⁻, (2), has a –CH₂OCH₂CF₂CF₂Cl substituent at the para position of the pyridinium ring. In salt (1), the iodide anion is involved in one N—H…I and three C—H…I hydrogen bonds, which, together with C—H…F hydrogen bonds, link the cations and anions into a three‐dimensional network. For salt (2), the iodide anion is involved in one N—H…I hydrogen bond, two C—H…I hydrogen bonds and one C—Cl…I halogen bond; additional C—H…F and C—F…F interactions link the cations and anions into a three‐dimensional arrangement.     

Recognition of anions and monocarboxylic acids by a fluorescent guanidine-based receptor

A guanidine-based fluorescent receptor has been synthesised to study its binding behaviour towards anions (F^? , Cl^? , Br^? , I^?  and AcO^? ). The two donor N–H bonds of the receptor do not point in the same direction; rather, one N–H bond is intramolecularly hydrogen-bonded with the carbonyl oxygen atom. The nature of the donor–acceptor (DA) arrangement induces moderate binding properties. The binding behaviour towards monocarboxylic acids (benzoic acid and phenylacetic acid) is also compared. The binding behaviour of receptor 1 towards the F^?  anion is higher among the anions studied, whereas in the case of monocarboxylic acid, the binding constant with phenylacetic acid is higher than benzoic acid.     

Poly[μ2‐chloro‐μ2‐1,4‐oxathiane‐κ2S:S‐copper(I)]

The title complex, [CuCl(C₄H₈OS)]_n, contains infinite spiral (CuS)_n chains linked by bridging Cl atoms into layers. The Cl atoms do not form polymeric fragments with Cu^I, but combine into isolated centrosymmetric Cu₂Cl₂ units. The compound is non‐isomorphous with the Br‐containing analogue, which contains Cu₈S₈ rings linked by Br atoms into chains. The O atom of the 1,4‐oxathiane mol­ecule does not realize its coordination abilities in the known copper(I)–halide complexes, while in copper(II)–halide complexes, oxathiane is coordinated via the S and O atoms. This falls into a pattern of the preferred inter­actions, viz. weak acid (Cu^I atom) with weak base (S atom) and harder acid (Cu^II atom) with harder base (O atom).     

Anion Binding Properties of N-Confused Porphyrins at the Peripheral Nitrogen

Ni(II), Pd(II), and Cu(II) complexes of N-confused porphyrin (NCP) exhibit anion binding properties through a hydrogen bonding interaction at the peripheral NH of confused pyrrole ring. The binding constants of the tetrakis(pentafluorophenyl)-NCP metal complexes (1-M, M= Ni, Pd, Cu) for various halide anions in CH₂C1₂ increase in the order of F^? > Cl^? > Br^? > I^?, respectively. Zwitterionic resonance form of the NCP complexes as well as interactions between halide anions and a pentafluorophenyl group are suggested to be important for efficient anion binding.     

Diagonally Related s‐ and p‐Block Metals Join Forces: Synthesis and Characterization of Complexes with Covalent Beryllium–Aluminum Bonds

Additions of beryllium–halide bonds in the simple beryllium dihalide adducts, [BeX₂(tmeda)] (X=Br or I, tmeda=N,N,N′,N′‐tetramethylethylenediamine), across the metal center of a neutral aluminum(I) heterocycle, [:Al(^DipNacnac)] (^DipNacnac=[(DipNCMe)₂CH]^?, Dip=2,6‐diisopropylphenyl), have yielded the first examples of compounds with beryllium–aluminum bonds, [(^DipNacnac)(X)Al‐Be(X)(tmeda)]. For sake of comparison, isostructural Mg–Al and Zn–Al analogues of these complexes, viz. [(^DipNacnac)(X)Al‐M(X)(tmeda)] (M=Mg or Zn, X=I or Br) have been prepared and structurally characterized. DFT calculations reveal all compounds to have high s‐character metal–metal bonds, the polarity of which is consistent with the electronegativities of the metals involved. Preliminary reactivity studies of [(^DipNacnac)(Br)Al‐Be(Br)(tmeda)] are reported.     

Impact of the anion and chalcogen on the crystal structure and properties of 4,6‐dimethyl‐2‐pyrimido(thio)nium halides

By the reaction of urea or thiourea, acetylacetone and hydrogen halide (HF, HBr or HI), we have obtained seven new 4,6‐dimethyl‐2‐pyrimido(thio)nium salts, which were characterized by single‐crystal X‐ray diffraction, namely, 4,6‐dimethyl‐2‐oxo‐2,3‐dihydropyrimidin‐1‐ium bifluoride, C₆H₉N₂O⁺·HF₂^? or (dmpH)F₂H, 4,6‐dimethyl‐2‐oxo‐2,3‐dihydropyrimidin‐1‐ium bromide, C₆H₉N₂O⁺·Br^? or (dmpH)Br, 4,6‐dimethyl‐2‐oxo‐2,3‐dihydropyrimidin‐1‐ium iodide, C₆H₉N₂O⁺·I^? or (dmpH)I, 4,6‐dimethyl‐2‐oxo‐2,3‐dihydropyrimidin‐1‐ium iodide–urea (1/1), C₆H₉N₂O⁺·I^?·CH₄N₂O or (dmpH)I·ur, 4,6‐dimethyl‐2‐sulfanylidene‐2,3‐dihydropyrimidin‐1‐ium bifluoride–thiourea (1/1), C₆H₉N₂S⁺·HF₂^?·CH₄N₂S or (dmptH)F₂H·tu, 4,6‐dimethyl‐2‐sulfanylidene‐2,3‐dihydropyrimidin‐1‐ium bromide, C₆H₉N₂S⁺·Br^? or (dmptH)Br, and 4,6‐dimethyl‐2‐sulfanylidene‐2,3‐dihydropyrimidin‐1‐ium iodide, C₆H₉N₂S⁺·I^? or (dmptH)I. Three HCl derivatives were described previously in the literature, namely, 4,6‐dimethyl‐2‐oxo‐2,3‐dihydropyrimidin‐1‐ium chloride, (dmpH)Cl, 4,6‐dimethyl‐2‐sulfanylidene‐2,3‐dihydropyrimidin‐1‐ium chloride monohydrate, (dmptH)Cl·H₂O, and 4,6‐dimethyl‐2‐sulfanylidene‐2,3‐dihydropyrimidin‐1‐ium chloride–thiourea (1/1), (dmptH)Cl·tu. Structural analysis shows that in 9 out of 10 of these compounds, the ions form one‐dimensional chains or ribbons stabilized by hydrogen bonds. Only in one compound are parallel planes present. In all the structures, there are charge‐assisted N⁺—H…X^? hydrogen bonds, as well as weaker C_Ar⁺—H…X^? and π⁺…X^? interactions. The structures can be divided into five types according to their hydrogen‐bond patterns. All the compounds undergo thermal decomposition at relatively high temperatures (150–300 °C) without melting. Four oxopyrimidinium salts containing a π⁺…X^?…π⁺ sandwich‐like structural motif exhibit luminescent properties.