Effects of Axle‐Core,Macrocycle, and Side‐Station Structures on the Threading and Hydrolysis Processes of Imine‐Bridged Rotaxanes

Imine‐bridged rotaxanes are a new type of rotaxane in which the axle and macrocyclic ring are connected by imine bonds. We have previously reported that in imine‐bridged rotaxane 5 , the shuttling motion of the macrocycle could be controlled by changing the temperature. In this study, we investigated how the axle and macrocycle structures affect the construction of the imine‐bridged rotaxane as well as the dynamic equilibrium between imine‐bridged rotaxane 5 and [2]rotaxane 7 by using various combinations of axles ( 1 A , B ), macrocycles ( 2 a – e ), and side‐stations (XYL and TEG). In the threading process, the flexibility of the macrocycle and the substituent groups at the para position of the aniline moieties affect the preparation of the threaded imines. The size of the imine‐bridging station and the macrocyclic tether affects the hydrolysis of the imine bonds under acidic conditions.     

Synthesis and properties of a twistophane ion sensor: a new conjugated macrocyclic ligand for the spectroscopic detection of metal ions

The synthesis of a structurally new type of conjugated macrocyclic ligand (1) is reported that comprises a dehydroannulene framework incorporating two 2,2'-bipyridine units. Modeling studies showed the ligand to possess an unusual chirally twisted and relatively rigid architecture capable of binding metal ions in an enforced tetrahedral coordination geometry. The macrocycle was prepared in seven steps from (2-bromophenylethynyl)-trimethylsilane (2) and characterized by spectroscopic techniques. The pyridine H3 protons in the 1H NMR spectrum of 1 showed a marked temperature dependencey that may be related to conformational opening and closing motions of the macrocyclic ring. Ligand 1 was found to spectroscopically detect the presence of Co2+, Ni2+, Cu2+, and Zn2+ and, in particular, to function as a multiple readout sensor, giving different sequences of signal output depending upon the type of metal ion analyte with which the system was addressed. Macrocycle 1 also gave a highly characteristic and specific visual output response in the presence of Zn2+ consisting of a bright turquoise fluorescence and in this respect may find applications in the sensing of this biologically important metal ion.     

Nickel(II) Complexes with a Hydroxyl Pendant‐Armed Macrocyclic Ligand: Synthesis,Characterization, and Crystal Structures

The reactions of different nickel(II) salts with a mixed‐donor macrocyclic ligand L (6,7,8,9,10,11,18,19‐octahydro‐5H, 17H‐dibenzo[f,o][1,5,9,13] dioxadiazacyclohexadecin‐18‐ol), potentially pentadentate N₂O₃ donor sets containing one pendant alcohol function have been investigated. The physical properties and the chemical structures of 1:1 (metal:ligand) NiLX₂ (X = Cl^?, Br^?, NO₃^?, ClO₄^?) complexes have been characterized by using IR, UV‐Vis spectroscopy and conductance measurements. The X‐ray determination have been employed to probe the nature of the respective complexes in solid state. The nickel atom in [NiL(NO₃)]NO₃·0.5H₂O complex is six‐coordinate with a distorted octahedral coordination in which the all N₂O₃ donor atoms are coordinated to the nickel atom. The coordination sphere is completed by a nitrate anion. In contrast to the above nickel complex, in [NiLCl₂] complex the pendant hydroxyl arm of macrocycle remains uncoordinated and ligand acts as tetradentate N₂O₂ donor atoms. The coordination sphere is completed by two chloride anions and the nickel atom is six‐coordinate with a distorted octahedral coordination.     

Manganese amido-imine bisphenol Hangman complexes

A modular ligand macrocycle is composed from two phenolic groups linked to a cyclohexane bridge through an amide bond and an imine bond. The stability of the asymmetric linkers to metathesis permits a macrocyclic platform to be assembled from the condensation of two different phenolic groups in a single-step, high yield, reaction. The primary coordination sphere may be tuned with functional groups on one phenolic group. The other phenolic group may be modified with a scaffold possessing a proton transfer group. In this way, control over the secondary coordination sphere of the macrocycle is achieved. Manganese complexes of the amido-imine linked macrocycle catalytically epoxidizes 1,2-dihydronapthalene using sodium hypochlorite as the oxidant. The amido-imine macrocycles represent a new metal active site capable of supporting high oxidation states and attendant atom transfer chemistry while at the same time permitting control over the primary and secondary sphere of the metal center.     

Strained cyclophane macrocycles: impact of progressive ring size reduction on synthesis and structure

The synthesis, X-ray crystal structures, and calculated strain energies are reported for a homologous series of 11- to 14-membered drug-like cyclophane macrocycles, representing an unusual region of chemical space that can be difficult to access synthetically. The ratio of macrocycle to dimer, generated via a copper catalyzed azide-alkyne cycloaddition macrocyclization in flow at elevated temperature, could be rationalized in terms of the strain energy in the macrocyclic product. The progressive increase in strain resulting from reduction in macrocycle ring size, or the introduction of additional conformational constraints, results in marked deviations from typical geometries. These strained cyclophane macrocyclic systems provide access to spatial orientations of functionality that would not be readily available in unstrained or acyclic analogs. The most strained system prepared represents the first report of an 11-membered cyclophane containing a 1,4-disubstituted 1,2,3-triazole ring and establishes a limit to the ring strain that can be generated using this macrocycle synthesis methodology.     

Metal‐Ion‐Induced Switch of Liquid‐Crystalline Orientation of Metallomacrocycles

A new series of shape‐persistent imine‐bridged macrocycles were synthesized based on dynamic covalent chemistry. The macrocycles had an alternating sequence of dibenzothiophene and N,N′‐bis(salicylidene)‐ethylenediamine (salen) tethering branched alkyl chains. The macrocycles and tetranuclear metallomacrocycles bearing long and branched alkyl chains exhibited thermotropic columnar liquid‐crystalline phases over a wide temperature range and the metallomacrocycles greatly depended on the characteristics of the coordinated metal ions. The metal‐free macrocycle showed a liquid‐crystalline phase with a lamellar structure and poor birefringence. In sharp contrast, the macrocyclic Ni complex showed a columnar oblique liquid‐crystalline phase, whereas the Pd and Cu complexes showed columnar liquid‐crystalline phases with a lamellar structure. The macroscopic organization and thermal properties of the corresponding liquid‐crystalline metallomacrocycles were significantly dependent on the subtle structural differences among the planar macrocycles, which were revealed by single‐crystal X‐ray crystallographic analysis of the macrocycles with shorter alkyl chains.     

Fast Pirouetting Motion in a Pyridine Bisamine‐Containing Copper‐Complexed Rotaxane

The present work reports the introduction of pyridine bisamine terdentate ligands in the structure of a pirouetting copper rotaxane. Rotaxane 2 [PF₆] constitutes the first example of the incorporation of imine‐based dynamic covalent chemistry in the synthesis of switchable copper‐complexed interlocked systems. In this rotaxane, the substitution of the classical terpyridine terdentate unit by a pyridine bisamine moiety has led to a significant stabilization of the pentacoordinated site. That fact has been evidenced by EPR spectroscopy and cyclic voltammetry. Regarding the tetracoordinated site, the congestion around the coordination sphere has been reduced to accelerate the typically slow reorganization of the Cu^II. Ethynyl‐3,8‐substitution on the axis phenanthroline along with the 2,9‐diphenyl‐1,10‐phenanthroline (dpp) present in the macrocycle afforded a very stable coordination environment for Cu^I, which is at the same time labile upon oxidation. In summary, the incorporation of a pyridine bisamine unit as a terdentate ligand and the optimization of the bidentate ligand of the axle not only has led to a simplification of the synthetic procedures, but it has also given rise to a bistable systems with an enhanced energetic separation between states and an acceleration of the reorganization processes. Thus far, rotaxane 2 [PF₆] presents the fastest switching cycle reported to date in copper‐interlocked dynamic systems.     

Hydrogen bonding-directed multicomponent dynamic covalent assembly of mono- and bimacrocycles. Self-sorting and macrocycle exchange

This paper describes the multicomponent dynamic covalent assembly of macrocyclic structures by utilizing hydrogen bonding-driven zigzag anthranilamides as "leading" components. Two or three amino groups have been introduced to one side of hydrogen bonded anthranilamide oligomers. The preorganization of the frameworks enabled the amino groups to condense with structurally matched aldehydes to form mono- and bimacrocycles in good to quantitative yields. Reactions from up to five components have been investigated, which involved one-step formation of up to six imine bonds. The preorganization of the templates highly enhanced the stability of the macrocyclic structures. As a result, all the macrocycles could be purified by simply recrystallizing the crude products from suitable solvents. Coexisting experiments of three series of three to five components were also performed, which all revealed that the preorganized precursors possessed high self-sorting capacity. On the basis of the same approach, a hydrazone-based macrocycle was also prepared quantitatively, while an intermacrocycle hydrazone-imine exchange was revealed to facilitate the formation of the hydrazone-based macrocycle from an imine-based macrocycle.     

Ligand binding inside the cavities of lacunar and saddle-shaped cyclidene complexes: molecular mechanics and molecular dynamics studies

Cobalt(II) complexes with tetradentate macrocyclic cyclidene ligands are known to coordinate one additional axial base molecule, leaving the sixth vacant coordination site at the metal ion available for small ligand (e.g., O2) binding. Molecular mechanics and molecular dynamics simulations provide a microscopic view of 1-methylimidazole (MeIm) binding within the cavities of several lacunar (bridged) and saddle-shaped (unbridged) cyclidenes and uncover the roles of the bridges and the walls of the clefts in steric protection of the cobalt(II) coordination site. Short bridges (C3 and C6) prevent inside-the-cavity MeIm binding because of severe ligand distortions leading to high-energy penalties (58 and 25 kcal/mol, respectively), while long bridges (C8 and C12) flip away from the MeIm binding site, allowing for penalty-free MeIm inclusion. In the unbridged saddle-shaped complex, there is no energy difference between inside- and outside-the-cavity MeIm binding. The preferential existence of the coordinatively unsaturated, five-coordinate species Co(unbrCyc)(MeIm)2+ should therefore be explained by electronic, rather than steric, factors. Molecular dynamics and free energy simulations reveal the presence of a weak (ca. 4 kcal/mol in the gas phase and ca. 2 kcal/mol in methanol solution) noncovalent MeIm binding site at the entrance of the cleft of cobalt(II) unbridged cyclidene, at a distance of about 4 A from the metal ion. The macrocycle geometry remains undistorted at such large Co-N(MeIm) separations, while the cavity opens up by 0.9 A upon covalent MeIm binding (Co-N(MeIm) distance of 2 A). An increase in macrocycle strain energy upon MeIm inclusion is compensated by favorable nonbonded interactions between the incoming base and the walls of the unbridged cyclidene.     

Catalytic "active-metal" template synthesis of [2]rotaxanes, [3]rotaxanes, and molecular shuttles, and some observations on the mechanism of the cu(i)-catalyzed azide-alkyne 1,3-cycloaddition

A synthetic approach to rotaxane architectures is described in which metal atoms catalyze covalent bond formation while simultaneously acting as the template for the assembly of the mechanically interlocked structure. This "active-metal" template strategy is exemplified using the Huisgen-Meldal-Fokin Cu(I)-catalyzed 1,3-cycloaddition of azides with terminal alkynes (the CuAAC "click" reaction). Coordination of Cu(I) to an endotopic pyridine-containing macrocycle allows the alkyne and azide to bind to metal atoms in such a way that the metal-mediated bond-forming reaction takes place through the cavity of the macrocycle--or macrocycles--forming a rotaxane. A variety of mono- and bidentate macrocyclic ligands are demonstrated to form [2]rotaxanes in this way, and by adding pyridine, the metal can turn over during the reaction, giving a catalytic active-metal template assembly process. Both the stoichiometric and catalytic versions of the reaction were also used to synthesize more complex two-station molecular shuttles. The dynamics of the translocation of the macrocycle by ligand exchange in these two-station shuttles could be controlled by coordination to different metal ions (rapid shuttling is observed with Cu(I), slow shuttling with Pd(II)). Under active-metal template reaction conditions that feature a high macrocycle:copper ratio, [3]rotaxanes (two macrocycles on a thread containing a single triazole ring) are also produced during the reaction. The latter observation shows that under these conditions the mechanism of the Cu(I)-catalyzed terminal alkyne-azide cycloaddition involves a reactive intermediate that features at least two metal ions.     

Reversible Adaptation to Photoinduced Shape Switching by Oligomer–Macrocycle Interconversion with Component Selection in a Three‐State Constitutional Dynamic System

Light irradiation of the molecular photoswitch 1 ‐E causes isomerization into the 1 ‐Z configuration stabilized by an internal hydrogen bond. 1 ‐E bears aldehyde groups allowing for dynamic covalent reaction with linear diamines. On photoinduced E/Z shape switching of 1 in presence of diamines, the system undergoes interconversion between two states, a non‐cyclic oligomeric one and a macrocyclic one, corresponding respectively to the E and Z configurations of 1 . With a mixture of linear α,ω‐diamines, 1 ‐E yields non‐selective dynamic oligomers by random incorporation of diamine components. Photoswitching to the 1 ‐Z form leads to constitutional adaptation with preferential formation of the macrocycle incorporating the best suited diamine, H₂N(CH₂)₇NH₂. In presence of metal cations, the E form switches from its unbound W shape to its coordinated U shape and yields the macrocycle resulting from the selective incorporation of the diamine H₂NCH₂CH₂OCH₂CH₂NH₂ that contains an additional O coordination site. Taken together, the results obtained describe constitutional adaptation in a triple state system: an oligomeric one and two different macrocyclic ones generated in response to two orthogonal agents, a physical stimulus, light, or a chemical effector, metal cations. These three states present, towards the incorporation of diamine components, respectively no selection, photoselection and metalloselection.     

New strategy and methods for constructing artificial macrocyclic anion receptors. Selective binding of tetrahedral oxoanions

A new rational strategy for assembling highly selective neutral macrocyclic anionic receptors proposed by the authors is considered. The strategy includes preliminary theoretical modeling of supramolecular complexes, analysis of synthetic paths for receptor preparation, selection and synthesis of building blocks followed by their cyclocondensation under thermo-dynamic control in the presence of acid corresponding to the target template anion, which provides anion-induced combinatorial selection of the macrocyclic ligand in the emerging dynamic combinatorial library. Analysis of the properties of the obtained anion receptors showed that the number of hydrogen bonds formed between the receptor and the guest anion mainly determines the binding energy. The receptor selectivity for a particular anion is determined by the nature of coordination sites, their geometry in the macrocyclic cavity, and the overall conformation rigidity of the macrocycle. Using the developed strategy and novel synthetic approaches, a large series of highly selective anion receptors with record binding constants (up to 10^p7 L mol^p-1 in both highly and weakly solvating media) was constructed and the structures of the host—guest complexes were studied in detail by both experimental and theoretical methods     

A Metallosupramolecular Shape‐Memory Polymer with Gradient Thermal Plasticity

Solid‐state plasticity by dynamic covalent bond exchange in a shape‐memory polymer network bestows a permanent shape reconfiguration ability. Spatio‐selective control of thermally induced plasticity may further extend the capabilities of materials into unexplored domains. However, this is difficult to achieve because of the lack of spatio‐control in typical polymer network synthesis. Metal–ligand interactions possess the high strength of covalent bonds while maintaining the dynamic reversibility of supramolecular bonds. Metallosupramolecular shape‐memory polymer networks were designed and prepared, which demonstrated solid‐state plasticity. The metallo‐coordination bonds within these networks permit facile tuning of the plasticity behavior across a wide temperature range, simply by changing the metal ion. By controlling the diffusion of two different metal ions during preparation of a polymer film, a plasticity behavior with a spatial gradient was achieved, providing a unique shape‐morphing versatility with potential in shape‐memory devices.     

Nanohoop Rotaxanes from Active Metal Template Syntheses and Their Potential in Sensing Applications

The unique optoelectronic properties and smooth, rigid pores of macrocycles with radially oriented π systems render them fascinating candidates for the design of novel mechanically interlocked molecules with new properties. Two high‐yielding strategies are used to prepare nanohoop [2]rotaxanes, which owing to the π‐rich macrocycle are highly emissive. Then, metal coordination, an intrinsic property afforded by the resulting mechanical bond, can lead to molecular shuttling as well as modulate the observed fluorescence in both organic and aqueous conditions. Inspired by these findings, a self‐immolative [2]rotaxane was then designed that self‐destructs in the presence of an analyte, eliciting a strong fluorescent turn‐on response, serving as proof‐of‐concept for a new type of molecular sensing material. More broadly, this work highlights the conceptual advantages of combining compact π‐rich macrocyclic frameworks with mechanical bonds formed via active‐template syntheses.     

Facile Synthesis of Nitrogen Tetradentate Ligands and Their Applications in CuI‐Catalyzed N‐Arylation and Azide–Alkyne Cycloaddition

Five new tetradentate ligands [NNNN] with benzimidazolyl‐imine or amine nitrogen donors have been synthesized in good yields under mild conditions from easily available substrates. trans‐N,N′‐bis(1‐Ethyl‐2‐benzimidazolylmethylene)cyclohexane‐1,2‐diimine is the best accelerating ligand in this series that supports the Cu^I‐catalyzed Ullmann N‐arylation and the direct three‐component azide–alkyne cycloaddition reaction to give the corresponding substituted imidazole, pyrazole, and triazole in high yields. Single‐crystal X‐ray diffraction analysis of its complex with CuI reveals a novel one‐dimensional coordination polymer of the metal chain bridged alternately by the [NNNN] ligand and diiodides.     

Synthesis of a Strained Acetylenic Macrocycle Incorporating a para‐Oligo[2]cruciform Bridge Bent over Nanoscopic Dimensions: Structural,Electronic, Spectroscopic,and Ion‐Sensing Properties

An Eglinton–Galbraith diethyne cyclization preferentially yielded a structurally unusual macrocycle, comprising a strained conjugated oligo[2]cruciform wire, forced into a 2.2 nm bow‐shape by a terpyridine rein or tether, and stabilized towards light and heat by four insulating triisopropylsilylacetylene (TIPSA) substituents. Spectroscopic ion‐binding studies revealed the macrocycle to exhibit a particularly high UV/Vis selectivity for Pd^II in dilute solution, and one of its precursors to afford a variety of luminescence quenching and color responses to particular metals, suggestive of promising ion‐sensor applications. Under more concentrated conditions, the new macrocycle is able to bind specific metals (e.g., Au^I) within its cavity despite the steric constraints. Intriguingly, variable‐temperature (VT) UV/Vis/¹H NMR investigations showed the TIPSA substituents to undergo restricted intramolecular motions along with reversible changes in the spectroscopic bandgap of the compound with temperature. In line with the theoretical calculations, the VT UV/Vis observations are consistent with a thermal modulation of the electronic conjugation through the strained oligo[2]cruciform bridge, which is coupled with redistributions within a mixture of conformational isomers of the macrocycle with differing relative twisting between the TIPSA‐substituted phenyl rings. Overall, the generation of a para‐oligo[2]cruciform, bent and flexed over nanoscopic dimensions through conformational tethering within the macrocyclic ring is noteworthy, and suggests a general approach to nanosized, curved, and strained, yet heat‐ and light‐stable, para‐phenyleneethynylene oligomers with unique physicochemical properties and challenging theoretical possibilities.     

A new pyridine-based 12-membered macrocycle functionalised with different fluorescent subunits; coordination chemistry towards Cu(II), Zn(II), Cd(II), Hg(II), and Pb(II)

The coordination chemistry of the new pyridine-based, N2S2-donating 12-membered macrocycle 2,8-dithia-5-aza-2,6-pyridinophane (L1) towards Cu(II), Zn(II), Cd(II), Hg(II), and Pb(II) has been investigated both in aqueous solution and in the solid state. The protonation constants for L1 and stability constants with the aforementioned metal ions have been determined potentiometrically and compared with those of ligand L2, which contains a N-aminopropyl side arm. The measured values show that Hg(II) in water has the highest affinity for both ligands followed by Cu(II), Cd(II), Pb(II), and Zn(II). For each metal ion considered, 1:1 complexes with L1 have also been isolated in the solid state, those of Cu(II) and Zn(II) having also been characterised by X-ray crystallography. In both complexes L1 adopts a folded conformation and the coordination environments around the two metal centres are very similar: four positions of a distorted octahedral coordination sphere are occupied by the donor atoms of the macrocyclic ligand, and the two mutually cis-positions unoccupied by L1 accommodate monodentate NO3- ligands. The macrocycle L1 has then been functionalised with different fluorogenic subunits. In particular, the N-dansylamidopropyl (L3), N-(9-anthracenyl)methyl (L4), and N-(8-hydroxy-2-quinolinyl)methyl (L5) pendant arm derivatives of L1 have been synthesised and their optical response to the above mentioned metal ions investigated in MeCN/H2O (4:1 v/v) solutions.     

Solid‐State Binding Studies of Group 2 Metal Ions with 12‐Crown‐4

The mode of co‐ordination of 12‐crown‐4 with the heavier group(II) ions Ca²⁺, Sr²⁺ and Ba²⁺ has been studied. Size limitations of the 12‐crown‐4 ligand enforced co‐ordinated metal ions to reside above the macrocyclic plane, with the remaining co‐ordination sphere occupied by water molecules and/or counter anions, or a second crown ether ligand to form a sandwich type species. Variation of the anion, by virtue of its co‐ordinating ability, affects the structural outcome.     

Combining Topological and Steric Constraints for the Preparation of Heteroleptic Copper(I) Complexes

Heteroleptic copper(I) complexes have been prepared from a macrocyclic ligand incorporating a 2,9‐diphenyl‐1,10‐phenanthroline subunit ( M30 ) and two bis‐phosphines, namely bis[(2‐diphenylphosphino)phenyl] ether (POP) and 1,3‐bis(diphenylphosphino)propane (dppp). In both cases, the diphenylphosphino moieties of the PP ligand are too bulky to pass through the 30‐membered ring of M30 during the coordination process, hence the formation of C_2v‐symmetrical pseudo‐rotaxanes is prevented. When POP is used, X‐ray crystal structure analysis shows the formation of a highly distorted [Cu( M30 )(POP)]⁺ complex in which the POP ligand is only partially threaded through the M30 unit. This compound is poorly stable as the Cu^I cation is not in a favorable coordination environment due to steric constraints. By contrast, in the case of dppp, the bis‐phosphine ligand undergoes both steric and topological constraints and adopts a nonchelating coordination mode to generate [Cu₂( M30 )₂(μ‐dppp)](BF₄)₂. This compound exhibits metal‐to‐ligand charge transfer (MLCT) emission characterized by a very large Stokes’ shift (≈200 nm) that is not attributed to a dramatic structural distortion between the ground and the emitting states but to very weak MLCT absorption transitions at longer wavelengths. Accordingly, [Cu₂( M30 )₂(μ‐dppp)](BF₄)₂ shows unusually high luminescence quantum yields for Cu^I complexes, both in solution and in the solid state (0.5 and 7 %, respectively).     

Exceptionally Inert Lanthanide(III) PARACEST MRI Contrast Agents Based on an 18‐Membered Macrocyclic Platform

We report a macrocyclic ligand based on a 3,6,10,13‐tetraaza‐1,8(2,6)‐dipyridinacyclotetradecaphane platform containing four hydroxyethyl pendant arms (L¹) that forms extraordinary inert complexes with Ln³⁺ ions. The [EuL¹]³⁺ complex does not undergo dissociation in 1 M HCl over a period of months at room temperature. Furthermore, high concentrations of phosphate and Zn²⁺ ions at room temperature do not provoke metal‐complex dissociation. The X‐ray crystal structures of six Ln³⁺ complexes reveal ten coordination of the ligand to the metal ions through the six nitrogen atoms of the macrocycle and the four oxygen atoms of the hydroxyethyl pendant arms. The analysis of the Yb³⁺‐ and Pr³⁺‐induced paramagnetic ¹H NMR shifts show that the solid‐state structures are retained in aqueous solution. The intensity of the ¹H NMR signal of bulk water can be modulated by saturation of the signals of the hydroxy protons of Pr³⁺, Eu³⁺, and Yb³⁺ complexes following chemical‐exchange saturation transfer (CEST). The ability of these complexes to provide large CEST effects at 25 and 37 °C and pH 7.4 was confirmed by using CEST magnetic resonance imaging experiments.