Carbohydrates as nucleophiles in conjugate addition for preparation of muramic acid analogues

Benzyl 2-acetamido-6-O-benzyl-3-O-[(S)-1-carboxy-isopropyl]-- -glucopyranoside (15) was synthesized stereoselectively by conjugate addition reaction, starting irom benzyl 2-acetamido-6-O-benzyl-2-deoxy--D-glucopyranoside (9) and crotonic acid ethyl ester under phase transfer conditions. The dipeptide L-Ala-D-Glu(OMe)OMe was coupled to 15 to give compuond 25 an analogue of the adjuvant active muramyl dipeptide (MDP)     

Solution conformations of the immunomodulator muramyl peptides

MDP, Murabutide and the MDP[D-Ala) analogue have been studied dissolved in dimethylsulfoxyde by means of ¹H-n.m.r., including the 2D.2Q ¹H-¹H inadequate and NOESY (Nuclear Overhauser Effect Spectroscopy) experiments. The results confirm the “S” shaped conformation constituted by two adjacent β turns in MDP. The first turn is a tight “type II β turn” and takes place around the MurNac (N-acetylmuramic acid) moiety of MDP and Murabutide and is stabilized by a C₁₀ hydrogen bonding between the Ala NH (1 + 3) and the acetamido C = 0 (1). The second turn is centered around L-Ala-D-iGln and requires the α-carboxamide group of D-iGln for its stabilization and thus does not occur in Murabutide. The L-Ala → D-Ala Inversion in MDP[D-Ala] produces substantial conformational modifications leading to a cyclic structure with the iGln α-carboxamide protons and the acetamido methyl group in close spatial proximity. The dissociation of the adjuvant, antiinfection and pyrogenic activities in the 3 compounds is well depicted by these variations of conformations.     

Synthesis of 1-Thio-N-acetylmuramoyl-L-alanyl-D-isoglutamine Derivatives,and Their Biological Activities. XX

Abstract

In the course of an investigation² on the relationship between the immunoadjuvant activity and the structure of the carbohydrate moiety in N-acetylmuramoyl-L-alanyl-D-isoglutamine (MDP), which is the minimal, immunoadjuvant-active component of bacterial cell-wall peptidoglycan, we demonstrated that not only is restricted configuration of the sugar moiety important for the activity² but also that chemical modifications^3–5 of the functional groups in the carbohydrate moiety produce various, important effects on the manifestation of activity. It has been shown that lipophilic derivatives^6–8 of MDP bearing the lipid moiety at C-6 of the sugar skeleton, or at the end of the peptide chain, have strong antitumor and anti-infection activities that are not for MDP itself. In addition, we have also observed that introduction^3b,9,10 of lipophilic character at C-2 in muramoyl-L-alanyl-D-isoglutamine, or at C-6 in N-acetyl-6-amino-6-deoxy-muramoyl-L-alanyl-D-isoglutamine, causes potent antitumor activity based on the immune reaction, as well as strong, immunoadjuvant activities.     

C-galactosylceramide: Synthesis and immunology

A synthetic C-glycoside, α-C-galactosylceramide, is an active immunostimulant in mice. It displays better activity than α-O-galactosylceramide in several disease models. Syntheses of several α-C-galactosylceramides are described. Experiments that probe its immunostimulant activity are outlined. Possible explanations for its superior activity are discussed.     

Mechanistic studies of the oxidative coupling polymerization of phenols. VI. Comparison of reactivities of DMP,PPO-dimer,and -trimer in the copper-catalyzed oxidative coupling polymerization

In the oxidative coupling polymerization, catalyzed by copper-amine complexes, the oxidation rates of 2,6-dimethylphenol (DMP) and its C? O-coupled dimer [4-(2′,6′-dimethylphenoxy)-2,6-dimethylphenol] and trimer [4-(-4′-(2″,6″-dimethylphenoxy)-2′,6′-dimethylphenoxy))-2,6-dimethylphenol] have been determined. The DMP concentration dependence shows a Michaelis–Menten-type behavior. On the other hand, the dimer and trimer showed a first-order rate-dependence in the respective phenol concentrations. This indicates that the slow reaction step, following an equilibrium complex formation between DMP and copper complex, is relatively fast for both the dimer and the trimer. Therefore, coordination of dimer or trimer to the copper complex appears to be rate-determining. Furthermore, the dimer and trimer gave overall reaction rates approximately eight times higher than found for DMP. Following the Flory principle of equal reactivity for functional groups of oligomers in polycondensations, all PPO oligomers can be assumed to have equally high oxidation rates as the dimer and trimer. The yield of undesired DPQ side product is strongly reduced when starting with the dimer (0.18%), or trimer (0.17%), compared to 3.3% for DMP. This is not unexpected, since DPQ can only be formed from two monomeric DMP residues. In fact, using a 1/10 molar mixture of dimer/DMP already results in a DPQ yield of only 1.7%. Furthermore, when starting from DMP, it has been observed that DPQ was predominantly formed during the first 30% conversion. Starting from dimer (or trimer) DPQ was formed at an almost constant very low rate during the whole course of the reaction. From these experiments it can be concluded that the most important polymerization reaction involves oxidation of copper-coordinated DMP anion to its corresponding cations, followed by coupling with a copper coordinated PPO chain.     

Synthesis of New Phosphono Desmuramyldipeptide Analogs

Abstract

Muramyldipeptide (MDP) is the minimal bacterial cell wall moiety with imniunomodulating activity [I]. It is known that N-acetylglucosamine part is not essential lor immunomodulating activity and it can be replaced by phthalimido 01 adamantyl substituted side chains [2]. In our previous work we have modified the peptide backbone of phthaliniido-MDP analogs by introducing the phosphonamide 01 phosphinamide moiety at the end of the acyclic side chain or between Ala and Glu [3, 4]. We report the synthesis of phthalimido-MDP analog 2, where the o-carboxylic group of Glu is replaced by phosphonate moiety. Compound 1, which is orthogonally protected D,L-Abu(P), was prepared from benzyl 4-bromo-2-phthalimidobutyrate and triethyl phosphite. After removal of the phthalimide protecting group the obtained compound was coupled with Boc-L-Ah. Boc group was removed and the product was coupled with 5-phthalimidopentanoic acid to give 2. Both benzyl and ethyl protection can be selectively removed under mild conditions (catalytic hydrogenation. Nal).     

Improved cyclic urea inhibitors of the HIV-1 protease: synthesis,potency, resistance profile,human pharmacokinetics and X-ray crystal structure of DMP 450

Background: Effective HIV protease inhibitors must combine potency towards wild-type and mutant variants of HIV with oral bioavailability such that drug levels in relevant tissues continuously exceed that required for inhibition of virus replication. Computer-aided design led to the discovery of cyclic urea inhibitors of the HIV protease. We set out to improve the physical properties and oral bioavailability of these compounds.Results: We have synthesized DMP 450 (bis-methanesulfonic acid salt), a water-soluble cyclic urea compound and a potent inhibitor of HIV replication in cell culture that also inhibits variants of HIV with single amino acid substitutions in the protease. DMP 450 is highly selective for HIV protease, consistent with displacement of the retrovirus-specific structural water molecule. Single doses of 10 mg kg⁻¹ DMP 450 result in plasma levels in man in excess of that required to inhibit wild-type and several mutant HIVs. A plasmid-based, in vivo assay model suggests that maintenance of plasma levels of DMP 450 near the antiviral IC₉₀ suppresses HIV protease activity in the animal. We did identify mutants that are resistant to DMP 450, however; multiple mutations within the protease gene caused a significant reduction in the antiviral response.Conclusions: DMP 450 is a significant advance within the cyclic urea class of HIV protease inhibitors due to its exceptional oral bioavailability. The data presented here suggest that an optimal cyclic urea will provide clinical benefit in treating AIDS if it combines favorable pharmacokinetics with potent activity against not only single mutants of HIV, but also multiply-mutant variants.     

壳聚糖-g-N-羧甲基-2-硫代-4,5-2H咪唑啉酮-多壁碳纳米管复合物固定漆酶基化学传感器的性能

通过壳聚糖-g-N-羧甲基-2-硫代-4,5-2H咪唑啉酮(CTS-g-N-CSIDZ)非共价功能化多壁碳纳米管(MWCNTs)的方式制备固定漆酶载体,该复合物载体主要通过物理吸附和漆酶活性中心与载体上配体之间的配位作用来固定漆酶,较大程度地保持了游离漆酶活性位原始构象.将固定了漆酶的复合物附着在裸玻碳电极上便构筑了复合物固定漆酶修饰玻碳电极.在以分光光度法测定了这种复合物载体对漆酶的担载量、固定漆酶比活力、稳定性、重复使用性及其催化2,6-二甲氧基苯酚(DMP)氧化动力学参数的基础上,还对基于此种复合物固定漆酶修饰玻碳电极作为化学传感器(以DMP作为底物)的性能进行了研究.结果表明,该复合物具有较高的固酶担载量(81.7 mg/g)和固定漆酶比活力(1.33 U/mg);而作为电化学传感器的复合物固定漆酶修饰玻碳电极对底物DMP具有较高的亲和力(对DMP的米氏常数KM是0.0918 mmol/L),较高的灵敏度( 3680 mA· L/mol),较低的检测限(3.3×10-4 mmol/L),较高的响应选择性,良好的重现性、重复使用性和长期稳定性.这种漆酶基电极有望用作电流型特定结构的酚类传感器.     

Synthetic studies of complex immunostimulants from Quillaja saponaria: synthesis of the potent clinical immunoadjuvant QS-21Aapi

QS-21 is one of the most promising new adjuvants for immune response potentiation and dose-sparing in vaccine therapy given its exceedingly high level of potency and its favorable toxicity profile. Melanoma, breast cancer, small cell lung cancer, prostate cancer, HIV-1, and malaria are among the numerous maladies targeted in more than 80 recent and ongoing vaccine therapy clinical trials involving QS-21 as a critical adjuvant component for immune response augmentation. QS-21 is a natural product immunostimulatory adjuvant, eliciting both T-cell- and antibody-mediated immune responses with microgram doses. Herein is reported the synthesis of QS-21A(api) in a highly modular strategy, applying novel glycosylation methodologies to a convergent construction of the potent saponin immunostimulant. The chemical synthesis of QS-21 offers unique opportunities to probe its mode of biological action through the preparation of otherwise unattainable nonnatural saponin analogues.     

云芝漆酶在N,N'-亚甲基双丙烯酰胺（BIS）交联聚甲基丙烯酸基元上的固定及其修饰玻碳电极电化学行为

以N,N′-亚甲基双丙烯酰胺（BIS）交联聚甲基丙烯酸作为固定漆酶的载体,以共价偶联法固定云芝漆酶并测定了固定基元的酶固定量和固定漆酶的比活力。 还研究了固定漆酶热稳定性、重复使用性以及固定漆酶催化2,6-二甲氧基苯酚（DMP）氧化的酶动力学参数。 实验结果表明,这种交联聚合物基元通过共价偶联法固定漆酶的量和固定漆酶的比活力分别可达26.37 mg/g和1.202 U/mg;在交联聚合物基元上固定的漆酶在50 ℃下放置2 h后仍然保持初始活力的83％,重复使用10次后仍保持初始活力的80％以上;交联聚合物固定漆酶催化DMP氧化的表观速率常数k_cat可达1090 min^-1,以固定漆酶的BIS交联聚甲基丙烯酸功能化碳纳米管修饰的玻碳电极在pH=4.4磷酸盐缓冲液中氧还原发生在+724 mV(vs.SCE)。     

Selective removal of DNA from protein solution with copolymer particles derived from N,N-dimethylaminopropylacrylamide

To remove nucleic acids from cellular products as drugs, cross-linked N,N-dimethylaminopropylacrylamide (DMP) particles with cationic functional groups were prepared. The particle's hydrophobicity and its anion-exchange capacity were easily adjusted by changing the cross-linking agent and the DMP ratio in the cross-linking, respectively. When divinylbenzene (DVB) was used as a cross-linking agent and the DMP ratio (in the cross-linking) was adjusted to 90 mol%, the particles (DMP-DVB, 90:10) showed the highest adsorbing activity of DNA (salmon spermary). Its adsorption capacity was 54 mg/ml adsorbent. On the other hand, the adsorption of bovine serum albumin (BSA) to the DMP-DVB extremely increased with increase in the adsorbent's pore size (molecular mass exclusions; M(lim)) from 2 x 10(3) to 1 x 10(4), but decreased with increase in the buffer's ionic strength (mu) to 0.2 or stronger. As a result, when the DMP-DVB (80:20) with M(lim) 2 x 10(3) was used as adsorbent by a column method at pH, 7.2 and mu = 0.17, it only selectively removed DNA from a BSA solution, including 1000 microg/ml of BSA and 10 microg/ml of DNA. The adsorbent decreased the concentration of DNA in the BSA solution to < 10 ng/ml, and the recovery rate of BSA was more 98%.     

Screening of laccase, manganese peroxidase, and versatile peroxidase activities of the genus Pleurotus in media with some raw plant materials as carbon sources

Species of the genus Pleurotus are among the most efficient natural species in lignin degradation belonging to the subclass of ligninolytic organisms that produce laccase (Lac), Mn-dependent peroxidase (MnP), versatile peroxidase (VP), and the H₂O₂-generating enzyme aryl-alcohol oxidase, but not lignin peroxidases. Production of Lac and oxidation of 2,6-dimethoxyphenol (DMP) in the presence and absence of Mn²⁺ were detected both in submerged fermentation (SF) of dry ground mandarine peels and in solid-state fermentation (SSF) of grapevine sawdust in all investigated Pleurotus species and strains. Evidence of cultivation methods having a distinct influence on the level of enzyme activities has been demonstrated. Most of the species and strains had higher Lac activity under SSF conditions than under SF conditions. DMP oxidation in the presence and absence of Mn²⁺ was detected in all investigated species and strains, but was lower under SF conditions than under SSF conditions for most of them. However, relative activities of DMP oxidation in the absence of Mn²⁺, as percentages of activity agasint DMP in the presence of Mn²⁺, were higher under conditions of SF than in SSF cultures in most of the investigated species and strains. The obtained results showed that strains of different origins have different efficiently ligninolytic systems and that conditions of SSF are more favorable for ligninolytic activity than those in SF owing to their similarity to natural conditions on wood substrates.     

Vapor pressure measurement for water,methanol, ethanol,and their binary mixtures in the presence of an ionic liquid 1-ethyl-3-methylimidazolium dimethylphosphate

Vapor pressure data were measured for water, methanol and ethanol as well as their binary mixtures with an ionic liquid (IL) 1-ethyl-3-methylimidazolium dimethylphosphate ([EMIM][DMP]) at varying temperature and IL-content ranging from mass fraction of 0.10–0.70 by a quasi-static method. The vapor pressure data for the IL-containing binary systems were correlated using NRTL equation with average absolute relative deviation (ARD) within 0.0076, and the binary NRTL parameters was used for predicting the vapor pressure of the IL-containing ternary systems with reasonable accuracy. In addition, the infinite activity coefficients of solvents in [EMIM][DMP] and isobaric vapor–liquid equilibrium for IL-containing ternary systems at 101.325 kPa and mass fraction of IL being 0.5 were predicted with the regressed NRTL parameters. The results indicate that ionic liquid [EMIM][DMP] can depress the volatility of the solvents of water, methanol and ethanol but to a varying degree, leading to the variation of relative volatility of a solvent and even removal of azeotrope for water–ethanol mixture.     

Hindered organoboron groups in organic chemistry. 27. Preparations and some properties of alkylbis(2,6-dimethyl-4-methoxyphenyl)boranes ((DMP)2BR)

Alkylbis(2,6-dimethyl-4-methoxyphenyl)boranes((DMP)₂BR) have been synthesised in an attempt to overcome the limitations of the steric hindrance approach to the production of boron stabilised carbanions. Anion production from (DMP)₂BR, followed by alkylations and condensations with aldehydes are reported. Reduction of (DMP)₂F with potassium hydride yields the corresponding hydroborate. Attempts to isolate (DMP)₂BH were unsuccessful but the borane was readily trapped with alkynes, yielding alkenylboranes. The allyl derivative, (DMP)₂BAllyl, was made and some of its reactions were investigated.     

电聚合制备聚苯胺@石墨毡复合电极及其在电芬顿过程中的高效电催化性能

作为一种高级氧化技术(AOPs),芬顿氧化法(Fenton)因其操作简单、绿色高效而备受关注.其基本原理是Fe2+催化H2O2产生的羟基自由基(?OH)进攻有机物使之降解为无机小分子或盐.电芬顿法(Electro-Fenton,E-Fenton)是利用电化学方法原位生成H2O2的Fenton衍生法,其优点在于不需要从外界加入H2O2、高效节能、无选择性、并且易于和其他处理技术耦合,是一种非常有价值和应用前景的新型水处理技术.电芬顿技术的理论探究和工艺优化,是当今高级氧化技术的理论和实践研究的重要内容.E-Fenton过程的关键步骤是阴极材料上氧还原反应(Oxygen reduction reaction,ORR)持续生成H2O2.由于析氢过电位高、稳定性好、性能优异,碳材料成为ORR反应最常用的电催化阴极材料.石墨毡作为一种三维多孔立体材料,具有电化学活性面积大、传质好、导电性强、价格低等优点,是ORR的理想阴极材料.聚苯胺材料作为一种导电高分子材料,价格便宜、加工性好、且含有丰富的N原子,在基础研究和实际应用领域都十分活跃.我们创新性地采用电聚合的方法合成了聚苯胺@石墨毡(PANI@GF)复合电极,并通过降解邻苯二甲酸二甲酯(dimethyl phthalate,DMP)研究了其在电芬顿过程中的电催化性能.通过扫描电镜、X射线光电子能谱分析对电极表面结构和杂原子掺杂性进行了物化表征.结果显示PANI@GF复合电极同时具有宏观和微观的三维多孔结构,这种结构蓬松的多孔结构为氧气提供了合适的传递通道和足够的反应面积.所制备复合电极中N原子含量约为1.9%,且吡啶N和吡咯N的含量相对较高.这些N原子来自聚苯胺分子中含有的大量N原子,并能够促进ORR反应.石墨毡和聚苯胺两种材料的在结构和组分上的特点,使得PANI@GF复合电极具有优异的电芬顿降解DMP的性能.在DMP浓度为50 mg/L、电位0.5 V(vs.SCE)、氧气流速为0.4 L/min的条件下,其DMP降解反应表观动力学常数达0.0753 min-1,是石墨毡电极表观动力学常数(0.0151 min-1)的5倍.PANI@GF复合电极制备的最优聚合时间和碳化温度分别为1 h和900℃.这是因为聚合时间太长,可能导致聚苯胺层厚度大,微孔结构被堵塞,进而降低了反应活性面积和影响氧气传质效果,使得电极性能下降;而聚合时间太短,可能导致电极复合不充分.高温碳化可以使石墨毡表面聚苯胺层形成更多的孔结构,从而有利于ORR过程.DMP降解过程中氧气流速、Fe2+用量以及pH值等工艺条件对电极性能有一定的影响,结果表明其相应的优化值分别为0.4 L/min、1.0 mmol/L和3.0.当氧气流速过低时,溶液中低浓度的溶解氧使ORR过程受传质过程限制,导致电极不能充分反应;当氧气流速过大时,并不会增加已经达到饱和的溶液中的氧气浓度,而过大的氧气速率会冲击电极表面,降低电极稳定性而影响其催化性能.对Fe2+.用量而言,E-Fenton过程有多种Fe循环途径,不同的铁含量对于电极性能影响不明显.因此,1.0 mmol/L的Fe含量足够满足实验需要.pH值对E-Fenton过程至关重要,pH较高时,铁离子会形成配合物,阻碍铁循环,并且会导致H2O2的分解,从而降低电极DMP降解性能;而当pH太低时,较多的酸增加成本,且需要后续处理过程以消除酸的影响.实验结果表明3.0是最优pH值,与传统Fenton方法的最适pH相符.PANI@GF复合电极具有高效催化降解DMP的能力,在电芬顿技术处理有机废水中有潜在应用.     

Synthesis of modified peptidoglycan precursor analogues for the inhibition of glycosyltransferase

The peptidoglycan glycosyltransferases (GTs) are essential enzymes that catalyze the polymerization of glycan chains of the bacterial cell wall from lipid II and thus constitute a validated antibacterial target. Their enzymatic cavity is composed of a donor site for the growing glycan chain (where the inhibitor moenomycin binds) and an acceptor site for lipid II substrate. In order to find lead inhibitors able to fill this large active site, we have synthesized a series of substrate analogues of lipid I and lipid II with variations in the lipid, the pyrophosphate, and the peptide moieties and evaluated their biological effect on the GT activity of E. coli PBP1b and their antibacterial potential. We found several compounds able to inhibit the GT activity in vitro and cause growth defect in Bacillus subtilis . The more active was C16-phosphoglycerate-MurNAc-(L-Ala-D-Glu)-GlcNAc, which also showed antibacterial activity. These molecules are promising leads for the design of new antibacterial GT inhibitors.     

Ionic and neutral C60 complexes with coordination assemblies of metal tetraphenylporphyrins, MIITPP2.DMP (M=Mn, Zn). Coexistence of (C60-)2 dimers bonded by one and two single bonds in the same compound

Coordination assemblies of metal tetraphenylporphyrins, MIITPP2.DMP (M=Mn, Zn) were shown to form ionic multicomponent and neutral complexes with fullerene, {(MnIITPP)2.DMP}.(C60-)2.(DMETEP+)2.(C6H4Cl2)5 (1) and {(ZnTPP)2.DMP}.(C60)2.(C6H5Cl)4 (2), where DMP=N,N'-dimethylpiperazine and DMETEP+=the cation of N,N'-dimethyl-N'-ethylthioethylpiperazine. The crystal structure of 1 contains zigzag chains of the (C60-)2 dimers alternating with the DMETEP+ cations in the channels formed by the (MnIITPP)2.DMP units, whereas in 2 zigzag chains of the C60 molecules are separated by the (ZnTPP)2.DMP units and C6H5Cl molecules. The (MIITPP)2.DMP assemblies (M=Mn, Zn) have axial M-N(DMP) bonds of 2.315(2) and 2.250(2) A length, average equatorial M-N(DMP) bonds elongated to 2.141(3) and 2.077(2) A, and MII atoms displaced from the porphyrin plane toward the ligand by 0.677 and 0.485 A, respectively. The single-bonded sigma-(C60-)2 dimer coexists in 1 with the (C60-)2 dimer bonded by two single bonds with 86/14 occupancy factors. The sigma-(C60-)2 dimers are unusually stable and begin to dissociate only above a temperature of 320-330 K that results in the increase of the magnetic moment of 1 from 8.33 microB (320 K) to 8.66 microB (360 K). The electron paramagnetic resonance (EPR) signal of the dimeric phase (T<320 K) with the features spread over the range of 0-0.7 T was attributed to the interacting Mn2+ centers in the (MnIITPP)2.DMP units. The dissociation of the sigma-(C60-)2 dimers to the EPR-active C60*- radical anions manifests a new broad Lorenz signal above 320 K with g=2.0179 and DeltaH=65.5 mT. This signal can appear due to the exchange coupling between paramagnetic (MnIITPP)2.DMP and C60*- species. The vis-NIR spectrum of the sigma-(C60-)2 dimers is discussed.     

Iodine(V) reagents in organic synthesis. Part 2. Access to complex molecular architectures via Dess-Martin periodinane-generated o-imidoquinones

o-Imidoquinones, a rather rare class of compounds, are prepared from anilides by the action of Dess-Martin periodinane (DMP) and water. Their chemistry has been extensively investigated and found to lead to p-quinones and polycyclic systems of diverse molecular architectures. Applications of this methodology to the total synthesis of the naturally occurring compounds, epoxyquinomycin B and BE-10988, are described. Finally, another rare chemical entity, the ketohydroxyamide moiety, has been accessed through this DMP-based synthetic technology, and its reactivity has been studied. Among its most useful reactions is a set of cascade heterocyclic annulations leading to a variety of polycyclic systems of possible biological relevance.