Transverse Relaxation of Scalar‐Coupled Protons

In a preliminary communication (B. Baishya, T. F. Segawa, G. Bodenhausen, J. Am. Chem. Soc. 2009 , 131, 17538–17539), we recently demonstrated that it is possible to obtain clean echo decays of protons in biomolecules despite the presence of homonuclear scalar couplings. These unmodulated decays allow one to determine apparent transverse relaxation rates R₂^app of individual protons. Herein, we report the observation of R₂^app for three methyl protons, four amide H^N protons, and all 11 backbone H^α protons in cyclosporin A. If the proton resonances overlap, their R₂^app rates can be measured by transferring their magnetization to neighboring ¹³C nuclei, which are less prone to overlap. The R₂^app rates of protons attached to ¹³C are faster than those attached to ¹²C because of ¹³C–¹H dipolar interactions. The differences of these rates allow the determination of local correlation functions. Backbone H^N and H^α protons that have fast decay rates R₂^app also feature fast longitudinal relaxation rates R₁ and intense NOESY cross peaks that are typical of crowded environments. Variations of R₂^app rates of backbone H^α protons in similar amino acids reflect differences in local environments.     

Heteronuclear multiple magnetic resonance studies of quaternary ammonium salts derived from heterocyclic bases

¹⁴N tickling experiments performed with simultaneous decoupling of substituent protons are used to show that ²J(¹⁴N? H_ortho) and ³J(¹⁴N? H_meta) are both positive in the N-methyl pyridinium ion and related species. Long range coupling extending over as many as five bonds is observed between N-methyl protons and ring protons in ¹⁴N-decoupled spectra. Triple resonance decoupling is used to permit an analysis of the AA′MM′ spin system given by the ring proton of N-methyl pyrazinium iodide.     

Concerning the chemical shifts of the ring protons of toluene as determined by 1H NMR spectroscopy of deuterated material

Chemical shifts of the ring protons are determined by ¹H NMR of 99% deuterated toluene. At low temperatures the deuterons relax rapidly, yielding sharp ¹H peaks for the ortho, meta and para protons. These are compared with shifts obtained by other methods.     

Effect of proton irradiation on structure and optical property of PTFE film

Effects of protons on chemical structure and optical properties of polytetrafluoroethylene (PTFE) film were investigated in the energy range of 60 to 170 keV to simulate the effects of space proton irradiation environment. The results show that for PTFE film irradiated with protons, the change in C_1s spectrum, along with those in F_1s and the FT‐IR spectrum after irradiation, demonstrates that two processes take place simultaneously. One is substitution in which carbon to fluorine bonds can be broken by the protons and some positions of fluorine are occupied by active protons; the other is the carbonification, which results in the change of surface color and an increase of carbon percentage on the irradiated surface. For the PTFE film irradiated with 150 keV protons, the spectral absorbance ΔA_λ in the wavelengths longer than 300 nm increase unmonotonously with proton fluence, and an abnormally recovery decrease of the ΔA_λ with the increase of fluence in the range of 5×10¹³ cm^?2 to 10¹⁵ cm^?2 is observed. The change of the ΔA_λ could be related to the competition of the carbonification and the substituting effect. The carbonification increases the ΔA_λ, while the substituting increases the amorphousness amount, leading to an increase in the transparency of the film. In addition, the creation of radicals can also contribute to the increase in absorbance. Copyright © 2003 John Wiley & Sons, Ltd.     

High resolution 13C and 1H NMR spectral analysis of 1-azafluorene

An analysis of the ¹H and ¹³C spectra of 1-azafluorene has been carried out using computer calculations and homo- and heteronuclear double resonance techniques. The ⁴J, ⁵J and ⁶J long-range coupling constants of the 9-CH₂ group protons with the protons of the pyridine and the phenylene rings have been observed and measured. The long-range J(CH) values in the ¹H coupled ¹³C spectrum have been assigned and measured on a first-order basis.     

Analysis of 1H NMR spectra of fluorene and azafluorenes: Long-range coupling constants

Analyses of the ¹H NMR spectra of fluorene, 2-nitrofluorene, 1-azafluorene, 2-azafluorene, 4-azafluorene, 7-nitro-4-azafluorene and 1,4-diazafuorene have been carried out using computer calculations and homo double resonance techniques. The relative signs and magnitude of the ⁴J, ⁵J and ⁶J long-range coupling constants of the 9-CH₂ group protons with the pyridine and phenylene ring protons have been measured by five- and six-spin calculations. It was established that the presence of substituents and the N heteroatom has only a very weak effect on the values and signs of these coupling constants. The usual alternating signs of long-range coupling constants involving π-electron systems were confirmed, giving negative signs for even and positive signs for odd numbers of bonds separating the coupling protons.     

1H NMR spectra part 31: 1H chemical shifts of amides in DMSO solvent

The ¹H chemical shifts of 48 amides in DMSO solvent are assigned and presented. The solvent shifts Δδ (DMSO‐CDCl₃) are large (1–2 ppm) for the NH protons but smaller and negative (?0.1 to ?0.2 ppm) for close range protons. A selection of the observed solvent shifts is compared with calculated shifts from the present model and from GIAO calculations. Those for the NH protons agree with both calculations, but other solvent shifts such as Δδ(CHO) are not well reproduced by the GIAO calculations. The ¹H chemical shifts of the amides in DMSO were analysed using a functional approach for near ( ≤ 3 bonds removed) protons and the electric field, magnetic anisotropy and steric effect of the amide group for more distant protons. The chemical shifts of the NH protons of acetanilide and benzamide vary linearly with the π density on the αN and βC atoms, respectively. The C=O anisotropy and steric effect are in general little changed from the values in CDCl₃. The effects of substituents F, Cl, Me on the NH proton shifts are reproduced. The electric field coefficient for the protons in DMSO is 90% of that in CDCl₃. There is no steric effect of the C=O oxygen on the NH proton in an NH…O=C hydrogen bond. The observed deshielding is due to the electric field effect. The calculated chemical shifts agree well with the observed shifts (RMS error of 0.106 ppm for the data set of 257 entries). Copyright © 2014 John Wiley & Sons, Ltd.     

Verification of the correlation between geometric parameters of molecules and the parameters of their 1H NMR spectra

The dihedral and bond direction angles between all pairs of vicinal protons of the arabinofuranose residue were calculated from the coordinatees of the hydrogen atoms found by an X-ray study of 3-O-acetyl-β-L -arabinofuranose 1,2,5-orthobenzoate. The values found were compared with those calculated with the help of correlation equations previously proposed by Karplus and recently by the authors, linking the values of those angles with the spin-spin coupling constants of vicinal protons [³J(H,H′)]. It has been found that the best agreement between the angles found crystallographically and calculated from the ¹H NMR data can be achieved using the equation which includes bond direction angles and the sum of the chemical shifts of the protons involved.     

NMR-untersuchungen an piperidinen—III. 1H-messungen an alkylpiperidinen

The ¹H-220 MHz spectra of several alkylpiperidines are reported. Almost complete assignments for all ring protons are possible. The effects of N-methyl and C-methyl groups on adjacent ring protons are discussed in detail.     

Proton NMR studies of reduced porphyrin compounds

Detailed ¹H NMR studies of ms tetraphenylchlorins (H₂TPC), new amino- and hydroxypyrroline substituted ms tetraphenylchlorins and ms tetraphenylisobacteriochlorins (H₂TPisoB) are presented and discussed. The results obtained are consistent with the general aspects of the ring current models as applied to the parent porphyrins. According to proton chemical shifts a gradual reduction in the magnitude of the ring current is observed in the order ms tetraphenylporphyrin (H₂TPP) > H₂TPC> ms tetraphenylbacteriochlorin (H₂TPB) > H₂TPisoB. The ¹H NMR spectra show chemical non-equivalence of the pyrroline ring protons due to adjacent substituents, and effects of steric constraints on the aminoalkyl substituents due to the close vicinity to the meso phenyl rings. The non-equivalence of the methylene protons of the pyrroline ring produces geminal coupling between the two methylene protons and vicinal coupling with the adjacent pyrroline proton, more pronounced in H₂TPC? OH and in . Restricted configuration of the methylene groups in the ethyl groups of H₂TPC? C(H)(CH₃)N(CH₂CH₃)₂ produces observable geminal coupling between the methylene protons. ¹H NMR reveals the difference between two types of meso phenyls in the chlorins, and three types of meso phenyls in isobacteriochlorins, as reflected in the chemical shifts of the o-phenyl protons.     

The Radical Anions of [2.2]Paracyclophane-1,9-diene and Some of its Derivatives. An Unexpected Conformational Interconversion

The radical anions of [2.2]paracyclophane-1,9-diene ( 2 ) and its 1,10,12,13,15,16-hexadeuterio derivative 2 -D₆, as well as those of 4,5,7,8-tetramethyl[2.2]paracyclophane-1,9-diene ( 3 ) and its 12,13,15,16-tetradeuterio derivative 3 -D₄, have been studied by ESR spectroscopy. The coupling constants for 2 ^?· at 178 K are 0.422 mT for four equivalent olefinic protons and 0.046 and 0.020 mT, each for a set of four equivalent aromatic protons. This hyperfine pattern is consistent with either benzene ring bearing two pairs of equivalent protons and it points to a lowering of the anticipated D_2h symmetry. The ESR spectra of 2 ^?· are strongly temperature dependent, due to modulation of the two coupling constants of 0.046 and 0.020 mT; these have opposite signs and average to 0.013 mT at 273 K. The experimental findings are interpreted in terms of a transition state of D_2h symmetry, 33 kJ/mol above two interconverting equivalent conformations of lower symmetry. Several pieces of evidence suggest that this symmetry is D₂, i.e., the benzene rings in 2 ^?· are twisted in opposite directions about the vertical axis. Temperature dependence of the ESR spectra, resulting from modulation of the hyperfine interactions with the aromatic protons, is also observed for 2 -D₆^?· and 3 ^?·. In the case of 3 ^?·, the olefinic protons are, as expected, only equivalent in pairs, the pertinent coupling constants being 0.560 and 0.325 mT. Upon standing at low temperatures, 2 ^?· and 3 ^?· gradually convert into the radical anions of [2.2]paracyclophane ( 1 ) and its 4,5,7,8-tetramethyl derivative, respectively. At higher temperatures, cleavage of one bridging chain in 2 ^?· also occurs, with the formation of the radical anion of (E)-4,4′-dimethylstilbene ( 7 ). Both reactions of 2 ^?· must involve the transient radical anion of [2.2]paracyclophane-1-ene ( 4 ) as proved by the observation of the spectra of 1 ^?· and 7 ^?· with 4 as the starting material.     

Détermination par Résonance Magnétique Nucléaire de la Configuration d'alcools Bicycliques [4.2.0] et Tricycliques [6.4.0.02,7] ou [5.4.0.02,6]

The configuration of various bicyclo[4.2.0]octanols has been established by ¹H NMR spectroscopy, with Eu(dpm)₃ as shift reagent. The intrinsic parameters Δ and K have been obtained and used as structural probes. Moreover, detailed data analysis showed that, contrary to the generally accepted concept, the vicinal coupling constant between trans cyclobutanic protons can be larger than that between cis protons. The chemical shifts obtained by ¹³C NMR spectroscopy are consistent with the proposed structures. The results have been extensively used to determine unambiguously the configuration of tricyclo[6.4.0.0^2,7]dodecanols and tricyclo[5.4.0.0^2,6]undecanol.     

Stereochemical characterization of some mono- and diaryl substituted ethylene oxides by NMR spectroscopy

NMR spectra of several styrene, stilbene and stilbazole oxides have been determined, and chemical shifts and coupling constants have been correlated with cis-and trans-configurations. Assignments have been made for all protons, and double resonance technique and ¹³C? H coupling constants have been used in some particular cases. An explanation is proposed for the observation that chemical shifts of oxirane protons are higher for cis than for trans isomers.     

The effect of the internal reference on ASIS correlations: 2—The intrinsic ASIS of TMS protons in aromatic hydrocarbon solvents

A method is developed to calculate the intrinsic ASIS of TMS protons used as internal reference, based on linear correlation of the ASIS of a group of sensor protons in two fixed aromatic solvents. Several solute systems (p-X-benzaldehydes, camphor, α-Br-camphor, 5-X-furfurals, p-X-acetophenones and methyl ketones) are used to calculate a series of intrinsic ASIS values of TMS in 12 aromatic hydrocarbon solvents. The Δ^α _TMS values are used, in turn, to calculate the intrinsic ASIS of CHO protons in dimethylformamide and diphenylformamide, and of the CH₃ protons in diethyl ether and diisopropyl ether.     

A molecular dynamics investigation of the titration of a trivalent aqueous ion

We carried out a series of molecular dynamics simulations of the hydrolysis of a model trivalent metal ion in aqueous solution. We use a dissociative model for water and examine the spontaneous speciation of M³⁺ into M(OH) _n ^(3-n)+ (n =1,4) both in neutral solution and as a function of added protons and hydroxide ions. The species distributions in neutral solution correspond reasonably well with those expected for real trivalent metal ions at neutral pH. However, the change in the species distributions as a function of either added protons or hydroxide ions is much less than expected with very large concentrations of protons or hydroxide ions required to shift the species equilibria in either direction. The influence of added protons and hydroxide ions on the species distributions appears to be proportional to the average charge of the hydrolysis couples, being highest for the 3+/2+ couple and lowest for the 1+/0 and 0/1- couples. Proton exchange rates vary with proton/hydroxide ion concentration giving a minimum at intermediate values ([H+]≈ 0.166) with increasing rates at both lower and higher pH.     

Diffusion of protons in silica hydrogel

The effect of preparation pH of silica hydrogel on the effective diffusion coefficient of protons in silica hydrogel (D _e , m²/s), on surface area of silica gel (S, m²/s) and on particle size of silica gel (D _p , mm) was studied. Silica hydrosols were obtained by adding water glass to sulfuric acid. The effective diffusion coefficient of proton in silica hydrogel was determined by the method of diffusion from silica hydrogel plane sheet to a stirred solution of a limited volume. A numerical solution was obtained for the diffusion equation using the Regula Falsi method. Regression analyses of experimental data were conducted.Diffusion of protons in silica hydrogel is a complicated process due to a decelerating effect of the porous structure of silica hydrogel and to the accelerating effects of slow ions such as Na⁺ and surface diffusion. The effective diffusion coefficient increased with surface area of silica gel, indicating the diffusion of protons on the surface of the silica particles.     

A 1H NMR and molecular modelling investigation of diastereotopic methylene hydrogen atoms

The ¹H NMR spectra of methyl 3‐bromo‐2‐methylpropionate (1a) and the corresponding chloro compound (2a) show no long‐range coupling between the methyl and methylene protons. In contrast, in the analogous dihalocompounds, methyl 2,3‐dibromo‐2‐methylpropionate (1b) and methyl 2,3‐dichloro‐2‐methylpropionate (2b), one of the methylene protons exhibits a large ⁴J_HH coupling (0.8 Hz) to the methyl group, but the other proton shows no observable splitting. This can be explained quantitatively by calculations of the conformational preferences in these compounds combined with the known orientation dependence of the ⁴J_HHcouplings. One conformer predominates in the dihalo compounds 1b and 2b, and this is responsible for the ⁴J_HH coupling. In 1a and 2a all three conformers are populated and the ⁴J_HH couplings average to zero. The technique is a potentially general method of unambiguously assigning diastereotopic methylene protons. Copyright © 2002 John Wiley & Sons, Ltd.     

Fast Proton Exchange in Histidine: Measurement of Rate Constants through Indirect Detection by NMR Spectroscopy

Owing to its imidazole side chain, histidine participates in various processes such as enzyme catalysis, pH regulation, metal binding, and phosphorylation. The determination of exchange rates of labile protons for such a system is important for understanding its functions. However, these rates are too fast to be measured directly in an aqueous solution by using NMR spectroscopy. We have obtained the exchange rates of the NH₃⁺ amino protons and the labile NH^ε2 and NH^δ1 protons of the imidazole ring by indirect detection through nitrogen‐15 as a function of temperature (272 K<T<293 K) and pH (1.3<pH<4.9) of uniformly nitrogen‐15‐ and carbon‐13‐labeled L ‐histidine ? HCl ? H₂O. Exchange rates up to 8.5×10⁴ s^?1 could be determined (i.e., lifetimes as short as 12 μs). The three chemical shifts δ_Hi of the invisible exchanging protons H_i and the three one‐bond scalar coupling constants ¹J(N,H_i) could also be determined accurately.     

1H and 13C NMR study of the effects exerted by an oxirane ring in the epoxybicyclo-[2.2.2]octane series

The ¹H and ¹³C NMR spectra of 2,3-disubstituted exo-5,6- and endo-5,6-bicyclo[2.2.2]octanes, and the corresponding alkanes, have been investigated to determine the effects exerted by an oxirane ring. The ¹H NMR study showed that the anti protons, H-7a and H-8a, are significantly shielded and the syn protons, H-7s and H-8s, are deshielded, although to a smaller extent, by the exo-oxirane. An endo-oxirane has practically no effect on the same protons. The stereochemistry of epoxybicyclo[2.2.2]octanes is, thus, easily deduced from ¹H NMR data. The ¹³C NMR study of the epoxy compounds provided an estimate of the value of α, β, γ syn and γ anti effects (to the epoxide oxygen) of an oxirane ring. In these rigid bicyclic molecules, of known geometry, the γ syn and the γ anti effects are of the same value, even though the dihedral angles are very different (0° and 120°).