Hydrogen bonding between carboxylic acids and amide-based macrocycles in their host–guest complexes

For 12- and 13-membered macrocycles in which two amide linkages are integrated in the macrocyclic ring systems, the formation of 1:1 host–guest complexes with acetic and benzoic acids has been confirmed by NMR titrations. The complex formation occurs with the formation constants of 8–27 M^? 1, under competition with the dimerisation of acid molecules. Benzoic acid tends to form more stable complexes than acetic acid. The binding force is due to a pair of hydrogen bonds, O_carboxyl–H…O = C_amide and C = O_carboxyl…H–N_amide, between the carboxyl group of a guest molecule and the amide group of a host molecule. The former bond is stronger than the latter, and defines the stability of the complexes. The formation of the pair of hydrogen bonds is accompanied by the conformational conversion of the amide group from the trans-form to the cis-form. The influence of such a conversion on the internal molecular motion is observed as a slight broadening of signal width.

For 12- and 13-membered macrocycles in which two amide linkages are integrated in the macrocyclic ring systems, the formation of 1:1 host–guest complexes with acetic and benzoic acids has been confirmed by NMR titrations. The binding force for the complex formation is due to a pair of hydrogen bonds, O_carboxyl–H…O = C_amide and C = O_carboxyl…H–N_amide. The former bond is stronger than the latter and dominates the hydrogen-bond formation. The formation of the pair of hydrogen bonds is accompanied by the conformational conversion of the amide group from the stable trans-form to the less stable cis-form.     

Kinetics of oxidation of nickel(II) aza macrocycles by peroxydisulphate in aqueous media

The kinetics of the oxidation of nickel (II) hexaaza and nickel (II) pentaaza macrocycles by the peroxydisulphate anion, S₂O₈ ²⁻, were studied in aqueous media. Effect of pH on reaction rate was also studied. The rate increases with increase of S₂O₈ ²⁻ concentration. Rates are almost independent of acid betweenpH 4 and 2, giving overall a relatively simple second-order rate law followed by oxidation within the ion pair solvent shell. Using rate =+1/2 d[Ni(L)³⁺]/dt =k[Ni(L)²⁺][S₂O₈ ²⁻], oxidation rate constants were determined.     

Structural Aspects of the Dephosphorylation of Adenosine Triphosphate Catalyzed by Polyammonium Macrocycles

Abstract

Four polyammonium macrocycles were synthesized and characterized: two with 21-membered rings and differing numbers of oxygen and nitrogen heteroatoms, [21]N₆O (1) and [21]N₅O₂ (2), and two with bipyridine incorporated into the ring, [24]N₄O₂bipy (3) and [27]N₃O₂bipy (4). Their ability to catalyze the dephosphorylation of adenosine triphosphate was examined. It was found that ring size plays a crucial role in the catalytic ability of the macrocycles, with the 21-membered rings being superior to larger macrocycles. Also, rates of dephosphorylation were found to increase with increasing number of nitrogen atoms in the ring. For two of the macrocycles, crystal structures were determined. Macrocycle 2 crystallizes in the tricliriic space group PI, a = 10.692(1), b = 17.037(2), c = 8.1952(8)Å, a = 92.550(9), β = 100.816(9), γ = 106.77(1)°, V = 1396.1(3) ų; the structure was solved to R = 0.089 and R _w = 0.098. Macrocycle 4 crystallizes in the monoclinic space group P2₁/n, a = 14.589(1), b = 15.427(1), c = 16.382(1) Å, b = 90.137(6)°, V = 3687.0(9) ų; the structure was solved to R = 0.056 and R _w = 0.085.     

A Tetrameric Cage with D2h Symmetry through Alkyne Metathesis

Shape‐persistent covalent organic polyhedrons (COPs) with ethynylene linkers are usually prepared through kinetically controlled cross‐coupling reactions. The high‐yielding synthesis of ethynylene‐linked rigid tetrameric cages via one‐step alkyne metathesis from readily accessible triyne precursors is presented. The tetrameric cage contains two macrocyclic panels and exhibits D_2h symmetry. The assembly of such a COP is a thermodynamically controlled process, which involves the initial formation of macrocycles as key intermediates followed by the connection of two macrocycles with ethynylene linkages. With a large internal cavity, the cage exhibits a high binding selectivity toward C₇₀ (K=3.9×10³ L mol^?1) over C₆₀ (no noticeable binding).     

Multifunctional Tricarbazolo Triazolophane Macrocycles: One‐Pot Preparation,Anion Binding,and Hierarchical Self‐Organization of Multilayers

Programming the synthesis and self‐assembly of molecules is a compelling strategy for the bottom‐up fabrication of ordered materials. To this end, shape‐persistent macrocycles were designed with alternating carbazoles and triazoles to program a one‐pot synthesis and to bind large anions. The macrocycles bind anions that were once considered too weak to be coordinated, such as PF₆^?, with surprisingly high affinities (β₂=10¹¹ M ^?2 in 80:20 chloroform/methanol) and positive cooperativity, α=(4 K₂/K₁)=1200. We also discovered that the macrocycles assemble into ultrathin films of hierarchically ordered tubes on graphite surfaces. The remarkable surface‐templated self‐assembly properties, as was observed by using scanning tunneling microscopy, are attributed to the complementary pairing of alternating triazoles and carbazoles inscribed into both the co‐facial and edge‐sharing seams that exist between shape‐persistent macrocycles. The multilayer assembly is also consistent with the high degree of molecular self‐association observed in solution, with self‐association constants of K=300 000 M ^?1 (chloroform/methanol 80:20). Scanning tunneling microscopy data also showed that surface assemblies readily sequester iodide anions from solution, modulating their assembly. This multifunctional macrocycle provides a foundation for materials composed of hierarchically organized and nanotubular self‐assemblies.     

π-Conjugated Macrocycles Bearing Angle-Strained Alkynes

Angle-strained alkyne-containing π-conjugated macrocycles are attractive compounds both in functional materials chemistry and biochemistry. Their interesting reactivity as well as photophysical and supramolecular properties have been revealed in the past three decades. This review highlights the recent advances in angle-strained alkyne-containing π-conjugated macrocycles, especially their synthetic methods, the bond angles of alkynes (∠_sp at C≡C−C), and their functions. The theoretical and experimental research on cyclo[n]carbons and para-cyclophynes consisting of ethynylenes and para-phenylenes are mainly summarized. Related macrocycles bearing other linkers, such as ortho-phenylenes, meta-phenylenes, heteroaromatics, biphenyls, extended aromatics, are also overviewed. Bond angles of strained alkynes in π-conjugated macrocycles, which are generable, detectable, and isolable, are summarized at the end of this review.     

Stepwise Oxidations in a Cofacial Copper(II) Porphyrin Dimer: Through-Space Spin-Coupling and Interplay between Metal and Radical Spins

cis and trans-copper(II) porphyrin dimers have been synthesized, in which two Cu^II porphyrin macrocycles are bridged through a rigid ethene linker for possible through-space and through-bond spin-couplings between the paramagnetic Cu^II centers. It has been found that the two macrocycles come closer after 1 e⁻ oxidation, however, they move far apart upon further 1 e⁻ oxidation leading to transformation of the cis to the trans isomer. Detailed investigations are performed here on the interactions between the two porphyrin macrocycles, between two unpaired spins of closely spaced Cu^II centers, and also between the unpaired spins of metal and porphyrin π–cation radicals. Spectroscopic investigations along with the X-ray structure of the 2 e⁻-oxidized complex displayed strong electronic communications through the bridge between two porphyrin π–cation radicals. The counterion I₉⁻ is stabilized in an unusual trigonal-pyramidal structure in the 2 e⁻-oxidized complex in which the central iodide ion is bound with four iodine (I₂) molecules. Variable-temperature magnetic study revealed strong antiferromagnetic coupling between the two porphyrin π–cation radical spins (J_r–r) in the 2 e⁻-oxidized complex. DFT calculations suggest stabilization of the triplet state, which is also in good agreement with the experiment. Ab initio molecular dynamics allowed the variation of the structural details to be followed upon stepwise oxidations and also the final isomerization process including its associated energy barrier.     

A High‐Performance Organic Field‐Effect Transistor Based on Platinum(II) Porphyrin: Peripheral Substituents on Porphyrin Ligand Significantly Affect Film Structure and Charge Mobility

Organic field‐effect transistors incorporating planar π‐conjugated metal‐free macrocycles and their metal derivatives are fabricated by vacuum deposition. The crystal structures of [H₂(OX)] (H₂OX=etioporphyrin‐I), [Cu(OX)], [Pt(OX)], and [Pt(TBP)] (H₂TBP=tetra‐(n‐butyl)porphyrin) as determined by single crystal X‐ray diffraction (XRD), reveal the absence of occluded solvent molecules. The field‐effect transistors (FETs) made from thin films of all these metal‐free macrocycles and their metal derivatives show a p‐type semiconductor behavior with a charge mobility (μ) ranging from 10^?6 to 10^?1 cm² V^?1 s^?1. Annealing the as‐deposited Pt(OX) film leads to the formation of a polycrystalline film that exhibits excellent overall charge transport properties with a charge mobility of up to 3.2×10^?1 cm² V^?1 s^?1, which is the best value reported for a metalloporphyrin. Compared with their metal derivatives, the field‐effect transistors made from thin films of metal‐free macrocycles (except tetra‐(n‐propyl)porphycene) have significantly lower μ values (3.0×10^?6–3.7×10^?5 cm² V^?1 s^?1).     

Synthesis and properties of calixarene analogs incorporating a thiophene unit in the macrocyclic ring

Calixarene analogs containing a thiophene unit in the macrocyclic ring were prepared by a stepwise method. The macrocycles adopt a cone‐like form as the preferred conformation in solution. The induced chemical shift change, nOe experiment, and ¹H relaxation time (T₁) measurement supported the fact that the macrocycle forms a complex with the N‐methylpyridinium salt. In contrast, O‐tetramethylated macrocycles and linear phenol‐formaldehyde tetramer, could not efficiently include the N‐methylpyridinium salt.     

Soft Scorpionate Anions as Platforms for Novel Heterocycles

Soft scorpionates have thus far been seen mainly as a family of ligands. Their chemistry is extended here to the production of novel cationic macrocycles using dihaloalkanes. By replacing the dihaloalkanes with mild oxidising agents (NO⁺, I₂) we obtain two unique polycyclic heterocycles. The mechanism which leads to the formation of these polycyclic heterocycles is investigated using ab initio DFT calculations.     

Encapsulation of Pd(II) by N4 and N2O2 macrocyclic ligands: their use in catalysis and biology

New macrocyclic Schiff base Pd(II) compounds were synthesized by treating N₄ and N₂O₂ macrocycles with palladium chloride in a 1 : 1 ratio. The resulting macrocyclic compounds were characterized by elemental, IR, ¹H-NMR, ¹³C-NMR, mass, molar conductance, magnetic susceptibility, electronic spectra, and thermal analysis. These compounds were used as catalysts in the development of an efficient catalytic method for reduction of organic substrates having nitro, olefinic, acetylenic, and aldehyde groups under mild reaction conditions. The biological activities of all the macrocycles and macrocyclic Pd(II) compounds have been tested against gram positive (Bacillus subtilis and Staphylococcus aureus) and gram negative (Escherichia coli and Klebsiella pneumonia) bacteria and found to be more active than commercially available antibacterial drugs like Streptomycin and Ampicillin.     

Chiral macrocycles,part I: Synthesis and enantioselective transport of carboxylic acids as their Li+ salts

A new series of tetrapyrazolic macrocycles with a functionalized sidearm has been prepared. Their capability to transport Li⁺ salts of carboxylic acids has been examined and is shown to be strongly dependent on the functionality of the macrocycle sidearm. In the case of the Li⁺ (D, L.)-mandelate, chiral recognition has been observed.     

Carbazole-Containing Carbadecaphyrins: Non-aromatic Expanded Porphyrins that Undergo Proton-Triggered Conformational Changes

A pair of meso-unsubstituted expanded carbaporphyrins containing two carbazole moieties were prepared in high isolated yields (82 and 76 %, respectively). The two macrocycles, namely 3 and 4 , differ with respect to their substitution at the carbazole N-atoms i. e. by H and i-Bu, respectively. As prepared in their free-base forms, macrocycles 3 and 4 adopt figure-of-eight conformations and are best characterized as 40 π-electron, non-aromatic species possessing a decaphyrin(1.1.0.0.0.1.1.0.0.0) skeleton. Protonation of 3 with either trifluoroacetic acid (TFA) or perchloric acid (HClO₄) produces a parallelogram-shaped structure. A similar structure is produced when N-functionalized system 4 is treated with TFA. In contrast, protonation of 4 with HClO₄ leads it to adopt a twisted Möbius strip-like structure in the solid state, thus allowing access to three distinct conformational states as a function of the conditions.     

Ring Opening of a meso‐Triaryl 25‐Oxasmaragdyrin Macrocycle by m‐Chloroperoxybenzoic Acid

Smaragdyrin, a class of expanded porphyrin macrocycles, upon treatment with meta‐chloroperoxybenzoic acid (mCPBA) underwent oxidative ring opening to form an unprecedented linear pentaheterocyclic compound. The linear pentaheterocyclic compound was freely soluble in common organic solvents and characterized in detail by HRMS, 1D and 2D NMR spectroscopy, and X‐ray crystallography. Our preliminary studies indicated that the linear pentaheterocyclic compound can specifically sense anions such as H₂PO₄^? and CN^? ions, which was corroborated by absorption and fluorescence studies.     

Cuprous complexes and dioxygen. Part X. Influence of ring size on the autoxidation of Cu(I) complexes with cis-and trans-N2S2 macrocyclic ligands

The autoxidation of the Cu⁺ complexes with a series of six 12-, 14- and 16-membered macrocycles containing the N₂S₂ set of donor atoms has been studied with an oxygen electrode and with the stopped-flow technique. Inspite of the identical set of coordinating groups, the reactivity of the Cu⁼ complexes towards O₂ varies by more than 5 orders of magnitude, with rate constants between <0.1 and 2·10⁴ M^?1S^?1. Simple bimolecular rate laws are obtained from initial rates of autoxidation, but successive one-electron transfers with intermediate formation of superoxide are implied from the analysis of complete reaction curves for complexes with the 12-membered macrocycles. The kinetic parameters are compared with the redox potentials for the corresponding CuL²⁺/CuL⁺ couples. Only a rather rough correlation is found and steric factors must in addition be responsible for the observed reactivity pattern which shows a decrease of autoxidation rate with increasing size of the macrocyclic ring. No systematic effect was observed for the influence of cis- vs. trans-configuration of the donor atoms.     

Axial-ligation and macrocyclization of novel (E,E)-dioximes of nickel(II) palladium(II), platinum(II) and cobalt(III)

Summary The synthesis and characterization of new Ni^II, Pd^II, Pt^II and Co^III complexes, with the BF _inf2 ^sup+ -bridged,bis(-di-oximato) ligands are described. The initially formed six-coordinate hydrogen-bonded macrocycles, were used as metal templates to prepare the corresponding BF _inf2 ^sup+ - capped macrocycles. The complexes were characterized by¹H-n.m.r. and i.r. spectroscopy, and by elemental analysis.     

Surface plasmon resonance study on binding interactions of multivalent cyclophane hosts with immobilized guests

Guest‐binding affinities of water‐soluble cyclophane heptadecamer (1) and pentamer (2) with immobilized guests such as 1‐pyrenylmethylamine (PMA) and 2‐(1‐ naphthyl)ethylamine (NEA) were investigated by surface plasmon resonance (SPR) measurements. As a typical example, the binding constants (K) for 1 and 2 with the immobilized PMA as a guest were evaluated to be 2.5 × 10⁷ and 2.7 × 10⁶ M^?1, respectively, and were much larger than that of a monocyclic reference cyclophane (K, 2.5 × 10⁴ M^?1). Interestingly, in the complexation of 1 and 2 with the immobilized guests, more favorable association and dissociation rate constant values (k_a and k_d, respectively) were observed in comparison with those for the monocyclic cyclophane, reflecting multivalent effects in macrocycles. The multivalent effects in macrocycles as well as molecular recognition abilities of the cyclophane oligomers were confirmed even when the guest molecules were immobilized on SPR sensor chip surfaces. Copyright © 2009 John Wiley & Sons, Ltd.     

含2,6-二甲酰胺基吡啶单元的大环合成、结构及其对四面体构型阴离子的络合性质

采用前体二胺N,N’-(3-胺基苯基)-2,6-二甲酰亚胺吡啶(1)和5,5’-亚甲基双水杨醛(2)进行缩合反应得到含酚羟基的 [1+1] 席夫碱大环L1, 将其中席夫碱C=N双键还原得到环状骨架更具柔性的饱和大环L2. 通过1H NMR、FABMS和元素分析等对大环组成进行了表征, 并通过X射线单晶衍射解析了两个大环的晶体结构. 采用UV-Vis 光谱滴定技术对大环与系列阴离子的络合作用进行了考察, 结果表明席夫碱大环L1对四面体构型的阴离子H2PO4-、 HP2O73-和H2P2O72-有明显的选择性识别作用, 进一步通过UV-Vis 光谱、核磁滴定等技术获得了识别反应的配位比及平衡常数(K), L1对3个磷酸阴离子的络合能力依H2PO4-、HP2O73-和H2P2O72-顺序递增。     

Redox‐Driven Symmetry Change for Terbium(III) Bis(porphyrinato) Double‐Decker Complexes by the Azimuthal Rotation of the Porphyrin Macrocycles

Molecular structures for three oxidation forms (anion, radical, and cation) of terbium(III) bis(porphyrinato) double‐decker complexes have been systematically studied. We found that the redox state controls the azimuthal rotation angle (φ) between the two porphyrin macrocycles. For [Tb^III(tpp)₂]ⁿ (tpp: tetraphenylporphyrinato, n=?1, 0, and +1), φ decreases at each stage of the oxidation process. The decrease in φ is due to the higher steric repulsion between the phenyl rings on the porphyrin macrocycle and the β hydrogen atoms on the other porphyrin macrocycle, which results from the shorter interfacial distance between the two porphyrin macrocycles. Conversely, φ=45° for both [Tb^III(oep)₂]^?1 and [Tb^III(oep)₂]⁰ (oep: octaethylporphyrinato), but φ=36° for [Tb^III(oep)₂]⁺¹. Theoretical calculations suggest that the smaller azimuthal rotation angle of the cation form is due to the electronic interaction in the doubly oxidized ligand system.     

Synthesis and characterization of macrocyclic polystyrene block-copolymers

The synthesis of macrocyclic polystyrene- block-poly(2-vinylpyridine) and macrocyclic polystyrene- block-poly(dimethylsiloxane) was carried out by initiation of 2-vinylpyridine (2VP) and hexamethyl-cyclotrisiloxane (D3) by difunctional living polystyryllithium followed by coupling with 1,4-bis(bromethyl)benzene (1,4-DBX) and dichloro-dimethylsilane (Cl₂SiMe₂), respectively. A small portion of the living ABA precursors were protonated to serve as isobaric linear precursors. The linear and macrocyclic block copolymers were characterized by size-exclusion chromatography (SEC). The ratios of apparent cyclic/linear SEC molecular-weight maxima versus degree of polymerization (DP) show increases with decreasing DP varying from 0.70 ± 0.03 at high DP ≤ 200 to 0.78 ± 0.044 at low DP (≥60) whereas that of the linear ABA block copolymers decreased. Increases in glass transition temperature (Tg) were also observed for the cyclic PS-b-PDMS copolymers with respect to the isobaric linear precursors. The macrocycles were characterized by ¹H and ¹³C NMR and in the case of macrocyclic PS-b-PDMS by ²⁹Si NMR as well. Broadening in the NMR absorptions of the macrocyclic block copolymers is general and is similar to that observed for the homopolymers. Differemtial scanning calorimetry (DSC) analysis of the PS-b-P2VP macrocycles shows increases in Tg at lower molecular weight as was observed for the PS and P2VP macrocycles.