Molecular features of organic matter in diagnostic horizons from andosols as seen by analytical pyrolysis

Andosols are usually formed from volcanic substrates, with thick A horizons high in organic carbon mainly in the form of stabilized humic fractions. The peculiar properties of these soils are, to large extent, affected by poorly crystalline materials like allophanes, imogolite and other Fe and Al oxyhydroxides that induce intense organo-mineral interactions which are considered to play a relevant role in OM protection against biodegradation as regards other soils developed under similar climatic conditions. Little is known about the molecular composition of this stabilized OM in a soil scenario often considered as an efficient C-sink in terms of C sequestration processes.

Whole soil samples in addition to isolated humic and fulvic acids from organic A horizons of three soils with andic properties and one non-andic soil (Sodic Cambisol) from the island of Tenerife (Canary Islands, Spain) were analysed by double shot pyrolysis-gas chromatography–mass spectrometry (Py-GC/MS) in order to get some insight on the molecular composition of different structural domains of progressive structural stability.

Clear differences were found between soils, both in thermal desorption and pyrolysis behaviour of humic substances. In general the results suggest large yields of aliphatic (both alkyl and carbohydrate-derived pyrolysis compounds) pointing to high-performance processes of incorporation of aliphatic humic constituents in andosols probably favoured by interactions with amorphous minerals, whereas in non-andic soils the latter are comparatively less stabilized and are removed in early pyrolysis stages as if they occurred as loosely joined, thermoevaporation-released products.

In fact, compared to Cambisol, humic and fulvic acids from andic soils led to comparatively richer pyrograms and compound assemblages. The lack of similar amounts of these loosely joined, mainly aliphatic structures after thermal desorption of the whole andic soils indicate an origin for humic substances based on rapid sequestration of C-forms of recent (litter or microbial) origin.     

A critical review of advanced analytical techniques for water-soluble organic matter from atmospheric aerosols

Water-soluble organic matter (WSOM) from air particles plays a potentially important role in the climate system, yet little is known about its molecular composition and physico-chemical properties. During the past decade, the rapidly-evolving field of analytical instrumentation has produced sophisticated tools capable of providing molecular level information on this organic-aerosol fraction.This article presents a critical review of the major applications of these advanced analytical methods in WSOM analysis. We emphasize off-line methods relying on nuclear magnetic resonance and infrared spectroscopies, and high-resolution mass spectrometry. We also discuss the most prominent analytical methods for near real-time measurements of particulate WSOM. We address the limitations of advanced off-line and on-line instrumental techniques, and, finally, outline the major challenges ahead to improve the current knowledge on the chemical structures of aerosol WSOM.     

The three-dimensional structure of humic substances and soil organic matter studied by computational analytical chemistry

A novel three-dimensional structural concept for humic substances and soil organic matter (SOM) is proposed which is based on previously published, comprehensive investigations combining geochemical, wetchemical, biochemical, spectroscopic, agricultural and ecological data with analytical pyrolysis. Direct, temperature-programmed pyrolysis in the ion-source of the mass spectrometer and soft ionization in very high electric fields (Py-FIMS) and Curie-point pyrolysis-gas chromatography/mass spectrometry (Py-GC/MS) were the main applied thermal methods. Emphasis is laid on molecular modelling and geometry optimization of complex, polydisperse structures of biomacromolecules using modern PC software (HyperChem^®). Trapping and binding of atrazine in an organo-mineral complex is introduced as a first example of simulation experiments for soil processes at atomic level (nanochemistry). Future applications of semi-empirical calculations and molecular dynamics in pyrolysis studies are outlined.Dedicated to Professor Dr. Dieter Klockow on the occasion of his 60th birthday     

Behaviour of phospholipids in analytical reactive pyrolysis

Checking for the presence of egg in a painting layer allows to decide whether or not it is a tempera. Several already assessed analytical techniques may be used to perform the chemical analysis for the detection of egg in paintings. As an advantageous and alternative methodology for the determination of egg, a new application of analytical pyrolysis, hyphenated with gas chromatography–mass spectrometry (GC–MS) system, in presence of hexamethyldisilazane (HMDS) and tetramethylammonium-hydroxide (TMAH), is reported here. The innovation lays mainly in the choice of new markers for the presence of egg. It is here demonstrated that in art diagnostic tris-TMS-ester and methyl ester of phosphoric acid, generated by the pyrolysis of standard phospholipids and synthetic painting layers containing egg as binding medium, may be used as new markers for identification of egg in tempera layers. The adoption of these new markers in analytical pyrolysis allows to obtain higher analytical performance with respect to classical markers (fatty acids), especially in terms of yield and, as a consequence, in terms of limit of detection.     

Subject matter, role, and place of organic functional analysis in analytical chemistry

The place and role of organic functional analysis in analytical chemistry are considered. It is demonstrated that various areas of application of functional analysis are not joined into a single system as an important branch of analytical chemistry. A current analysis of the subject matter, role, and place of functional analysis in analytical chemistry allows one to recognize four main branches, which most adequately reflect the completeness and nature of this constituent of organic analysis.     

Dimethyl carbonate as a novel methylating reagent for fatty acids in analytical pyrolysis

Dimethyl carbonate (DMC) was investigated as a mild, harmless and odorless reagent for pyrolytic methylation of fatty acids. Soybean oil was selected as test material for its high content of (poly)unsaturated fatty acids. Pyrolyses were performed at 500, 700 and 900 degrees C by means of a heated platinum filament pyrolyser on-line and off-line to the GC-MS apparatus. Methyl esters of palmitic, linoleic, oleic and stearic acid were formed as prominent products from off-line pyrolysis of soybean oil in the presence of DMC and zeolite 13X. Fatty acid methyl esters (FAMEs) were not observed at important levels in the absence of zeolite, while on-line Py-GC-MS experiments resulted principally in the formation of free fatty acids and hydrocarbons. The FAME profiles obtained from the DMC/zeolite off-line pyrolysis were compared to those resulting from tetramethylammonium hydroxide (TMAH) thermochemolysis and BF3-methanol procedure. The observed differences between pyrolysis and methanolysis methods were principally attributed to the thermal degradation of unsaturated fatty acids. The effectiveness of the DMC/zeolite pyrolytic methylation was further demonstrated by the analysis of tripalmitine and soybean seeds.     

Isolation of water-soluble organic matter from atmospheric aerosol

The development of a solid phase extraction (SPE) method is presented, which is capable of isolating approx. 60% of the water-soluble organic compounds from aerosol samples. The aqueous extracts of the filter samples were acidified then passed through an SPE column. Four silica-based and two polymeric reversed phase columns were tested and similar recoveries of the organic carbon were found. The isolated organic matter was nearly free from inorganic ions, which are major constituents of atmospheric aerosol. This fraction accounted for a major part of the UV absorption above 250 nm and fluorescence activity of the aerosol extract. The precision of the method was tested by performing three parallel sample preparations with Oasis HLB columns. It was found that the relative standard deviation of the carbon content of the isolated organic matter was better than 7%, which indicated the reliability of the method. In the atmospheric aerosol research the newly developed sample preparation method facilitates the physical and chemical characterisation of water-soluble organic compounds without the interference of inorganic constituents.     

Colloidal behavior of aluminum oxide nanoparticles as affected by pH and natural organic matter

The colloidal behavior of aluminum oxide nanoparticles (NPs) was investigated as a function of pH and in the presence of two structurally different humic acids (HAs), Aldrich HA (AHA) and the seventh HA fraction extracted from Amherst peat soil (HA7). Dynamic light scattering (DLS) and atomic force microscopy (AFM) were employed to determine the colloidal behavior of the NPs. Influence of pH and HAs on the surface charges of the NPs was determined. zeta-Potential data clearly showed that the surface charge of the NPs decreased with increasing pH and reached the point of zero charge (ZPC) at pH 7.9. Surface charge of the NPs also decreased with the addition of HAs. The NPs tend to aggregate as the pH of the suspension approaches ZPC, where van der Waals attraction forces dominate over electrostatic repulsion. However, the NP colloidal suspension was stable in the pHs far from ZPC. Colloidal stability was strongly enhanced in the presence of HAs at the pH of ZPC or above it, but in acidic conditions NPs showed strong aggregation in the presence of HAs. AFM imaging revealed the presence of long-chain fractions in HA7, which entangled with the NPs to form large aggregates. The association of HA with the NP surface can be assumed to follow a two-step process, possibly the polar fractions of the HA7 sorbed on the NP surface followed by entanglement with the long-chain fractions. Thus, our study demonstrated that the hydrophobic nature of the HA molecules strongly influenced the aggregation of colloidal NPs, possibly through their conformational behavior in a particular solution condition. Therefore, various organic matter samples will result in different colloidal behavior of NPs, subsequently their environmental fate and transport.     

Structure determination of organic compounds by “electron pyrolysis”

By action of tritiated water on N-substituted 3-Amino-Δ ⁴-thiazoline-2-ones 1a-1d and -2-thiones 1e-1j cleavage of the N-N-bond occurs with the formation of Δ ⁴-thiazoline-2-ones 2a-2d and -2-thiones 2e-2j, respectively, and H₂N-R³ 3. Detection and identification of the fragments is performed by thin-layer chromatography and by comparison with authentic samples under the application of a radio-scanner. Such a fragmention is strong evidence for the five-membered ring structure of 1.     

Online upgrading of organic vapors from the fast pyrolysis of biomass

The online upgrading process that combined the fast pyrolysis of biomass and catalytic cracking of bio-oil was developed to produce a high quality liquid product from the biomass. The installation consisted of a fluidized bed reactor for pyrolysis and a packed bed reactor for upgrading. The proper pyrolysis processing conditions with a temperature of 500℃ and a flow rate of 4m3·h-1 were determined in advance. Under such conditions, the effects of temperature and weight hourly space velocity (WHSV) on both the liquid yields and the oil qualities of the online catalytic cracking process were investigated. The results showed that such a combined process had the superiority of increasing the liquid yield and improving the product quality over the separate processes. Furthermore, when the temperature was 500℃, with a WHSV of 3h-1, the liquid yield reached the maximum and the oxygenic compounds also decreased obviously.     

Laser-powered pyrolysis of organic impurities for their removal from germanium tetrachloride

Selective homogeneous pyrolysis of organic impurities in germanium tetrachloride yielding lower molecular weight and easily separable products can be accomplished by a cw CO₂ laser-photosensitized reaction. The features of this reaction make it advantageous over conventional pyrolysis.     

Molecular characterization of dissolved organic matter (DOM): a critical review

Advances in water chemistry in the last decade have improved our knowledge about the genesis, composition, and structure of dissolved organic matter, and its effect on the environment. Improvements in analytical technology, for example Fourier-transform ion cyclotron (FT-ICR) mass spectrometry (MS), homo and hetero-correlated multidimensional nuclear magnetic resonance (NMR) spectroscopy, and excitation emission matrix fluorimetry (EEMF) with parallel factor (PARAFAC) analysis for UV–fluorescence spectroscopy have resulted in these advances. Improved purification methods, for example ultrafiltration and reverse osmosis, have enabled facile desalting and concentration of freshly collected DOM samples, thereby complementing the analytical process. Although its molecular weight (MW) remains undefined, DOM is described as a complex mixture of low-MW substances and larger-MW biomolecules, for example proteins, polysaccharides, and exocellular macromolecules. There is a general consensus that marine DOM originates from terrestrial and marine sources. A combination of diagenetic and microbial processes contributes to its origin, resulting in refractory organic matter which acts as carbon sink in the ocean. Ocean DOM is derived partially from humified products of plants decay dissolved in fresh water and transported to the ocean, and partially from proteinaceous and polysaccharide material from phytoplankton metabolism, which undergoes in-situ microbial processes, becoming refractory. Some of the DOM interacts with radiation and is, therefore, defined as chromophoric DOM (CDOM). CDOM is classified as terrestrial, marine, anthropogenic, or mixed, depending on its origin. Terrestrial CDOM reaches the oceans via estuaries, whereas autochthonous CDOM is formed in sea water by microbial activity; anthropogenic CDOM is a result of human activity. CDOM also affects the quality of water, by shielding it from solar radiation, and constitutes a carbon sink pool. Evidence in support of the hypothesis that part of marine DOM is of terrestrial origin, being the result of a long-term carbon sedimentation, has been obtained from several studies discussed herein.     

Subcritical water extraction of organic matter from sedimentary rocks

Subcritical water extraction of organic matter containing sedimentary rocks at 300 °C and 1500 psi produces extracts comparable to conventional solvent extraction. Subcritical water extraction of previously solvent extracted samples confirms that high molecular weight organic matter (kerogen) degradation is not occurring and that only low molecular weight organic matter (free compounds) are being accessed in analogy to solvent extraction procedures. The sedimentary rocks chosen for extraction span the classic geochemical organic matter types. A type I organic matter-containing sedimentary rock produces n-alkanes and isoprenoidal hydrocarbons at 300 °C and 1500 psi that indicate an algal source for the organic matter. Extraction of a rock containing type II organic matter at the same temperature and pressure produces aliphatic hydrocarbons but also aromatic compounds reflecting the increased contributions from terrestrial organic matter in this sample. A type III organic matter-containing sample produces a range of non-polar and polar compounds including polycyclic aromatic hydrocarbons and oxygenated aromatic compounds at 300 °C and 1500 psi reflecting a dominantly terrestrial origin for the organic materials. Although extraction at 300 °C and 1500 psi produces extracts that are comparable to solvent extraction, lower temperature steps display differences related to organic solubility. The type I organic matter produces no products below 300 °C and 1500 psi, reflecting its dominantly aliphatic character, while type II and type III organic matter contribute some polar components to the lower temperature steps, reflecting the chemical heterogeneity of their organic inventory. The separation of polar and non-polar organic compounds by using different temperatures provides the potential for selective extraction that may obviate the need for subsequent preparative chromatography steps. Our results indicate that subcritical water extraction can act as a suitable replacement for conventional solvent extraction of sedimentary rocks, but can also be used for any organic matter containing mineral matrix, including soils and recent sediments, and has the added benefit of tailored extraction for analytes of specific polarities.     

Characterisation of organic matter in sediment from Corin Reservoir, Australia

Analytical pyrolysis was performed to characterise the organic matter present in sediments from Corin Reservoir, a major water supply for Canberra, Australia. Pyrolysis of the whole sediment yielded furans, methoxyphenols, aliphatic products and nitrogenous compounds that are indicative of carbohydrates, lignin, lipids and proteins respectively. There was a decrease in the observed relative peak area of polysaccharide and lignin-derived marker compounds with increasing depth of sediment and an increase in nitrogenous marker compounds. In addition, eucalyptol, a molecular marker compound characteristic of eucalyptus—the dominant vegetation of the surrounding catchment—was detected.     

Iodine trichloride as an analytical reagent for determination of some organic compounds

Procedures are described for the determination of organic compounds with iodine trichloride under Andrews's titration conditions. Samples are directly titrated with iodine trichloride or first reacted with an excess of iodine monochloride, with subsequent titration of the iodine formed. The direct titration is done initially in feebly acid medium, then the acidity is raised (biotin, methionine, cystine and thiomersal). Pre-oxidation with iodine monochloride is used if the organic compound reacts slowly [tryptophan and arsenic(III) compounds] or is determined in bicarbonate medium (hydroxylamine and thiosemicarbazide). The ferrocyanide formed by the reduction of ferricyanide (by thiourea and allylthiourea) can also be titrated. Arsenic(V) compounds are determined after reduction to arsenic(III), and iodine in organic compounds is converted into iodide by alkaline fusion into iodide and the iodide titrated.     

Oxygen determination in organic fluorine compounds by means of a glassy-carbon pyrolysis tube

A conventional apparatus for determination of oxygen in organic compounds has been improved for application to organic fluorine compounds. A feature of the apparatus is the use of a pyrolysis tube made of glassy carbon instead of quartz, which eliminates effects due to hydrogen fluoride produced in pyrolysis of the sample. Ten analyses of dexamethasone with the apparatus gave a mean value of 20.44% for oxygen (theory, 20.38%), with a standard deviation of 0.16%. Oxygen in 9 organic fluorine compounds was accurately determined by using the apparatus, with an average error of +0.1%. One analysis by a gravimetric or a coulometric method took about 40 or 25 min, respectively.     

Characterization of dissolved organic matter released from Microcystis aeruginosa.

The contribution of dissolved organic matter (DOM) released from phytoplankton (Microcystis aeruginosa) during cultivation and biodegradation was examined to clarify the causes of the organic pollution of Lake Biwa. Two peaks, peak 2 (retention time (RT) = 32 min) and peak 3 (RT = 35 min), were detected in the algal DOM released from Microcystis aeruginosa during cultivation and biodegradation by gel chromatography with a fluorescence detector (Ex = 340 nm, Em = 435 nm). As these peaks correspond with the peaks detected in the surface water of Lake Biwa, one can conclude that the algal DOM released from Microcystis aeruginosa during cultivation and biodegradation makes a considerable contribution to the refractory organic matter in Lake Biwa. Three fluorescence maxima were observed in the cultivation of Microcystis aeruginosa: a fulvic-like fluorescence peak (peak A) with Ex/Em values of 320/430 nm, a protein-like fluorescence peak (peak C) with Ex/Em values of 280/360 nm, and another peak with Ex/Em values of 240/370 nm. The fluorescence material of peak C has a larger MW than that of peak A. The algal-derived DOM from Microcystis aeruginosa has similar fluorescence to fulvic acid of soil origin but exhibits mainly hydrophilic characteristics. In the biodegradation of Microcystis aeruginosa, a fulvic-like fluorescence peak (peak B) with Ex/Em values of 250/440 nm and a peak with Ex/Em values of 320/380 nm were observed.     

Efficient hydrogen peroxide generation from organic matter in a bioelectrochemical system

Hydrogen peroxide (H₂O₂) is an important industrial chemical, but its current production methods are highly energy-intensive. This study presents a novel process for the production of H₂O₂ based on the bioelectrochemical oxidation of wastewater organics at an anode coupled to the cathodic reduction of oxygen to H₂O₂. At an applied voltage of 0.5 V, this system was capable of producing 1.9 ± 0.2 kg H₂O₂/m³/day from acetate at an overall efficiency of 83.1 ± 4.8%. As most of the required energy was derived from the acetate, the system had a low energy requirement of 0.93 kWh/kg H₂O₂.     

Modification of activated carbon porosity by pyrolysis under pressure of organic compounds

Co-pyrolysis at relatively low temperature (673 K) and high pressure (10 MPa), using three organic compounds, was used to modify the porosity of the two ACs. The co-pyrolysis is effective for the modification of the porosity of an AC, and the efficiency depends on the organic compound used. The differences found are consequence of the chemical composition of the organic precursor. High pressure pyrolysis produces beneficial results when an organic compound that volatilizes during the preparation is used. Conducting pyrolysis at low temperature permits improved control of the porosity because the rate of gasification can be more tightly controlled.