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1.
Molecular dynamics simulations were conducted to predict the structural properties and phase transition temperatures of n-alkanethiols CH(3)(CH(2))(n-1)SH (Cn, 4 ≤ n ≤ 22) self-assembled monolayers (SAMs) on Au (111) surfaces. We studied the effects of chain length on the structural properties, including tilt and orientation angles, and on phase transition temperature. We found clear dependence of the structural properties, on both the number of carbon atoms, n; and on n being odd or even. Alkanethiols with n ≤ 7 show liquid-like behavior and large rotational mobility, whereas those with n ≥ 12 are well-ordered and stable. For 12 ≤ n ≤ 15, odd-even effects are observed, where for n = odd, larger tilt angles, oriented in the direction of their next next nearest neighbor (NNNN), and for n = even, lower tilt angles, mostly tilted toward next nearest neighbor (NNN), were observed. For 15 ≤ n ≤ 19, we find tilt angle and orientation to be independent of n. For all alkanethiols, a gradual decrease of the tilt angle occurred by increasing the temperature from 300 to 420 K. Order-disorder phase transitions occurred at a certain temperature. This was signified by abrupt instabilities in the tilt orientation angle. This transition temperature showed an enhancement of ~67-100 °C over the melting point of the corresponding n-alkane bulk system. This enhancement depended on n, and was larger for n = odd. Overall, we found that odd alkanethiols show better structural and thermal stability, and smaller gauche defects.  相似文献   

2.
The formation of alkanethiol (H-(CH2)n-SH, n = 8-18) and 1,8-octanedithiol (HS-(CH2)8-SH) monolayer films on n-type GaAs(001) has been systematically studied. We observed a nonlinear dependence of the film thickness on molecular length, which is drastically different from monolayer films of the same molecules on metals. For 8 < or = n < or = 14, the films are only 3-4.5 A thick, significantly smaller than the corresponding molecular length. For n = 16 and 18, the measured film thicknesses were 9 and 11 A, respectively, consistent with molecules orienting with a tilt angle of approximately 60 degrees from the surface normal. Unlike the alkanethiols, the thickness of the 1,8-octanedithiol monolayer is almost the same as its molecular length, indicating that dithiol molecules orient vertically with only one thiol end group bound to the GaAs surface. Additional support for this conclusion comes from the fact that X-ray photoelectron spectroscopy of the 1,8-octanedithiol monolayer clearly resolves two types of S atoms in the monolayer: those bound to the GaAs surface and those existing as free thiols. A suggestion was made on the mechanisms for alkanethiol and alkanedithiol monolayer formation.  相似文献   

3.
The frictional dynamics of fluorine-terminated alkanethiol (S(CH2)8CF3) self-assembled monolayers (SAMs) on gold are studied using molecular dynamics simulations. The simulations treat the interactions between two SAMs on flat surfaces. The structure and frictional behavior are investigated as a function of applied pressure (200 MPa to 1 GPa) for a shear velocity of 2 m/s and compared to methyl-terminated alkanethiol SAMs. The maximum adhesive pressure between the SAMs is 220 MPa for both end groups. In agreement with experiments on the molecular scale, the shear stress and the coefficient of friction for CF3-terminated alkanethiols are larger than for CH3-terminated alkanethiols. The main source for the difference is primarily the tighter packing of the fluorinated terminal group resulting in a higher degree of order. The molecular scale coefficient of friction is correlated with the degree of order among all the systems.  相似文献   

4.
Self-assembled monolayers (SAMs) formed from 4,4'-terphenyl-substituted alkanethiols C6H5(C6H4)2-(CH2)nSH (TPn, n = 1-6) on polycrystalline (111) gold and silver substrates have been characterized by synchrotron-based high-resolution X-ray photoelectron spectroscopy. The intensities, binding energy positions, and width of most photoemission lines exhibited pronounced odd-even effects, i.e., systematic and periodic variation, depending on either odd or even number of the methylene units in the aliphatic linker of the TPn molecules. The detailed analysis of these effects provides important information on the bonding and arrangement of the chemisorbed sulfur headgroups in the TPn films and balance of the structural forces in alkanethiolate SAMs.  相似文献   

5.
Self-assembled monolayers (SAMs) of two omega-(4'-methylbiphenyl-4-yl)alkanethiols (CH(3)(C(6)H(4))(2)(CH(2))(n)SH, BPn, n = 4, 6) on Au(111) substrates, prepared from solution at room temperature and subsequently annealed at temperatures up to 493 K under a nitrogen atmosphere, were studied using scanning tunneling microscopy (STM), high-resolution X-ray photoelectron spectroscopy (HRXPS), and near-edge X-ray absorption fine structure spectroscopy (NEXAFS). In striking contrast to BPn SAMs with n = odd, for which only one phase is observed, the even-numbered BPn SAMs exhibit polymorphism. Irreversible phase transitions occur which involve three phases differing substantially in density and stability. Upon annealing, BP4 and BP6 transform into a beta-phase, which is characterized by an exceptionally high structural quality with virtually defect-free domains exceeding 500 nm in diameter. Exchange experiments, monitored by contact angle measurement, reveal that the beta-phase exhibits a dramatically improved stability. The fundamental differences in the phase behavior of even- and odd-numbered BPn SAMs are discussed in terms of two design strategies based on cooperative and competitive effects.  相似文献   

6.
This paper compares charge transport across self-assembled monolayers (SAMs) of n-alkanethiols containing odd and even numbers of methylenes. Ultraflat template-stripped silver (Ag(TS)) surfaces support the SAMs, while top electrodes of eutectic gallium-indium (EGaIn) contact the SAMs to form metal/SAM//oxide/EGaIn junctions. The EGaIn spontaneously reacts with ambient oxygen to form a thin (~1 nm) oxide layer. This oxide layer enables EGaIn to maintain a stable, conical shape (convenient for forming microcontacts to SAMs) while retaining the ability to deform and flow upon contacting a hard surface. Conical electrodes of EGaIn conform (at least partially) to SAMs and generate high yields of working junctions. Ga(2)O(3)/EGaIn top electrodes enable the collection of statistically significant numbers of data in convenient periods of time. The observed difference in charge transport between n-alkanethiols with odd and even numbers of methylenes--the "odd-even effect"--is statistically discernible using these junctions and demonstrates that this technique is sensitive to small differences in the structure and properties of the SAM. Alkanethiols with an even number of methylenes exhibit the expected exponential decrease in current density, J, with increasing chain length, as do alkanethiols with an odd number of methylenes. This trend disappears, however, when the two data sets are analyzed together: alkanethiols with an even number of methylenes typically show higher J than homologous alkanethiols with an odd number of methylenes. The precision of the present measurements and the statistical power of the present analysis are only sufficient to identify, with statistical confidence, the difference between an odd and even number of methylenes with respect to J, but not with respect to the tunneling decay constant, β, or the pre-exponential factor, J(0). This paper includes a discussion of the possible origins of the odd-even effect but does not endorse a single explanation.  相似文献   

7.
The interaction of small phospholipid vesicles with well-characterized surfaces has been studied to assess the effect of the surface free energy of the underlying monolayer on the formation of phospholipid/alkanethiol hybrid bilayer membranes (HBMs). The surface free energy was changed in a systematic manner using single-component alkanethiol monolayers and monolayers of binary mixtures of thiols. The binary surfaces were prepared on gold by self-assembly from binary solutions of the thiols HS-(CH(2))(n)()-X (n = 11, X = CH(3) or OH) in THF. Surface plasmon resonance (SPR), electrical capacitance, and atomic force microscopy (AFM) measurements were used to characterize the interaction of palmitoyl,oleoyl-phosphatidylcholine (POPC) vesicles with the surfaces. For all surfaces examined, it appears that the polar part of surface energy influences the nature of the POPC assembly that associates with the surface. Comparison of optical, capacitance, and AFM data suggests that vesicles can remain intact or partially intact even at surfaces with a contact angle with water of close to 100 degrees. In addition, comparison of the alkanethiols of different chain lengths and the fluorinated compound HS-(CH(2))(2)-(CF(2))(8)-CF(3) that characterize with a low value of the polar part of the surface energy suggests that the quality of the underlying monolayer in terms of number of defects has a significant influence on the packing density of the resulting HBM layer.  相似文献   

8.
High resolution and high sensitivity friction force microscopy (FFM) is used to distinguish between different crystallographic domains of standing up molecular configurations of self-assembled alkanethiols partially covering Au(111) surfaces. We propose two suitable methods to decipher structural domains of the same configuration depending on the two-dimensional (2D) symmetry of the organic adlayer. For the hexagonal (radical3xradical3)R30 degrees where no differences among equivalent domains are expected in lattice-resolved scanning force imaging, different molecular domains however can be observed in lateral force images because of the friction asymmetry caused by domains presenting different relative orientations between the molecular tilt direction and the tip scanning direction. Since no lateral packing anisotropy is expected in this close-packed configuration, no friction anisotropy however is observed. Conversely, because of its rectangular space group symmetry, lattice resolved stick-slip imaging is enough to solve between the existing domains for the (2xradical3) rectangular configuration.  相似文献   

9.
Quantum chemical calculations on the linear and nonlinear electric polarizabilities of dipolar molecules separated by the alkyl spacers have been performed on O(2)N-Ph-N=N-Ph-(CH(2))(n)-Ph-N=N-Ph-NO(2), n = 1-12. These molecules exhibit a very strong odd-even behavior in the first hyperpolarizabilities (beta), with large (small) beta for n = odd (n = even). Such odd-even oscillations have been reported experimentally on similar systems, but the origin of such phenomena remains unclear. We propose it to be due to the role of the conformational orientation of the intervening alkyl spacers that leads to eclipsed orientation (parallel) of the dipoles for n = odd chains while staggered orientation (antiparallel) for n = even chains. The energy difference between the two extreme angular forms is approximately 6-8 kcal/mol, clearly more than the thermal fluctuations at room temperature. These conformational orientations will be preserved, leading to different packing arrangements at the macroscopic scale. We believe that it is this interaction at the molecular scale that controls such a macromolecular property.  相似文献   

10.
Chemisorption of alkanethiols on As-rich GaAs (001) surface under a low coverage condition was studied using first principles density functional calculations in a periodic supercell approach. The thiolate adsorption site, tilt angle and its direction are dictated by the high directionality of As dangling bond and sulfur 3p orbital participating in bonding and steric repulsion of the first three CH2 units from the surface. Small charge transfer between thiolate and surface, strong dependence of total energy on tilt angle, and a relatively short length of 2.28 A of the S-As bond indicate the highly covalent nature of the bonding. Calculated binding energy of 2.1 eV is consistent with the available experimental data.  相似文献   

11.
The micellization properties of cationic symmetric gemini surfactants, [CmH(2m+1)(CH3)2N(CH2)6N(CH3)2CmH(2m+1)]Br2 (designated as CmC6CmBr2, with m = 7, 8, 9, 10, 11, 12, and 16), has been investigated by isothermal titration microcalorimetry. The critical micelle concentration (CMC) and enthalpy of micellization (DeltaHmic) were determined from calorimetric titration curves. The linear decreasing of log CMC with increasing the length of the hydrophobic chain is consistent with an increase in the hydrophobicity of the alkyl chain. Interestingly, with increasing the length of the alkyl chain, the DeltaHmic values of the surfactants with even numbered alkyl chains vary from endothermic to exothermic, whereas the DeltaHmic values of the surfactants with odd numbered alkyl chains are all endothermic and tend to become more endothermic. The pronounced even/odd effect in DeltaHmic is discussed with respect to the "donor-acceptor" interaction.  相似文献   

12.
The influence of the urea and amide group in the alkyl chain of methyl nonadecanoate on the surface properties is investigated and compared. For that purpose, the ureas CH3O2C-(CH2)m-NHCONH-(CH2)n-CH3 (n + m = 14) [1 (m = 2), 3 (m = 3), and 5 (m = 4)] and the amides CH3O2C-(CH2)m-NHCO-(CH2)n-CH3 (n + m = 15) [2(m = 2), 4 (m = 3), and 6 (m = 4)] were synthesized. The pi/A isotherms of the ureas show up to the attainable temperature of 313 K no LE phase, which indicates a very stable LC phase. The amides exhibit a two phase plateau region, with the exception of 2. The different behavior is connected with the hydrogen bond energies, which are stronger with the ureas in the LC than in the LE phase, whereas those of the amides have a similar strength in both phases. The effect of hydrogen bonds in self-assembled molecules of N,N'-dialkylurea CH3-(CH2)m-NHCONH-(CH2)n-CH3 (m + n = 14) [7 (n = 2)] was visualized by STM at the octylbenzene/graphite interface. Compound 7 forms a lamella structure with a periodicity of one molecule length. The tilt angle of 86 degrees +/- 2 degrees to the edge of the lamella points to a nearly orthogonal arrangement of the molecules. It indicates two equivalent bonds between the aza-hydrogens and the carbonyl oxygen. A similar arrangement is proposed for the LC phase of the ureas at the air/water interface.  相似文献   

13.
The reversible self-assembly of a series of bipolar amphiphiles, alpha,omega-bis(3- or 4-amidinophenoxy)alkanes (chain length n = 5-12), on mercaptoalkanoic acid-functionalized gold surfaces (chain length n = 10, 11, 14, 15) has been studied by in-situ ellipsometry, IR reflection absorption spectroscopy (IRAS), and atomic force microscopy (AFM). The layer order, amphiphile orientation, and tendency to form bilayers depends on the position of the amidine substituent, the alkyl chain length of both the amidine amphiphile and the underlying acid self-assembled monolayer (SAM), and whether the amidine alkyl chain contained an even or odd number of methylene groups. Thus, para-substituted bisbenzamidines containing more than six methylene groups (n>6) and with an odd number (n = 7, 9, 11) tended to form bilayered structures, whereas those containing an even number formed monolayers when adsorbed on SAMs of the long-chain acids (n = 14, 15). This behavior also correlated with the average tilt angle of the benzene moieties of the amphiphiles, as estimated by IRAS. The odd-numbered chains gave lower tilt angles than the even-numbered ones, and a possible model that accounts for these results is proposed. IRAS also revealed a higher order of the odd-numbered chains and an increasing hydrogen-bonding contribution with increasing chain length. Additional evidence for the proposed bilayered assemblies and their reversibility was obtained by AFM. Images obtained from the assembly of decamidine on a SAM of mercaptohexadecanoic acid in a pH 9 borate buffer revealed domains of similar size to that of the underlying acid SAM (20-30 nm), but less densely packed. By acidifying the solution, the second layer was destabilized and a very smooth layer with few defects appeared. Further acidification to pH 3 also destabilized the first layer.  相似文献   

14.
The structural properties of self-assembled monolayers (SAMs) of oligo(ethylene glycol) (OEG)-terminated and amide-containing alkanethiols (HS(CH(2))(15)CONH(CH(2)CH(2)O)(6)H and related molecules with shorter alkyl or OEG portions) on gold are addressed. Optimized geometry of the molecular constituents, characteristic vibration frequencies, and transition dipole moments are obtained using density-functional theory methods with gradient corrections. These data are used to simulate IR reflection-absorption (RA) spectra associated with different OEG conformations. It is shown that the positions and relative intensities of all characteristic peaks in the fingerprint region are accurately reproduced by the model spectra within a narrow range of the tilt and rotation angles of the alkyl plane, which turns out to be nearly the same for the helical and all-trans OEG conformations. In contrast, the tilt of the OEG axis changes considerably under conformational transition from helical to all-trans OEG. By means of ab initio modeling, we also clarify other details of the molecular structure and orientation, including lateral hydrogen bonding, the latter of which is readily possessed by the SAMs in focus. These results are crucial for understanding phase and folding characteristics of OEG SAMs and other complex molecular assemblies. They are also expected to contribute to an improved understanding of the interaction with water, ions, and ultimately biological macromolecules.  相似文献   

15.
Molecular dynamics (MD) simulations were performed to investigate odd-even chain length dependencies in the wetting properties of self-assembled monolayers (SAMs) of n-alkanethiols [CH3(CH2)n-1SH] on gold by water and hexadecane. Experimentally, the contact angle of hexadecane on the SAMs depends on whether n is odd or even, while contact angles for water show no odd-even dependence. Our MD simulations of this system included a microscopic droplet of either 256 water molecules or 60 hexadecane molecules localized on an n-alkanethiolate SAM on gold with either an even or odd chain length. Contact angles calculated for these nanoscopic droplets were consistent with experimentally observed macroscopic trends in wettability, namely, that hexadecane is sensitive to structural differences between odd- and even-chained SAMs while water is not. Structural properties for the SAMs (including features such as chain tilt, chain twist, and terminal methyl group tilt) were calculated during the MD simulations and used to generate IR spectra of these films that compared favorably with experimental spectra. MD simulations of SAMs in contact with slabs of water and hexadecane revealed that the effects of these solvents on the structure of the SAM was restricted to the chain terminus and had no effect on the inner structure of the SAM. The density profiles for water and hexadecane on the SAMs were different in that water displayed a significant depletion in its density at the liquid/SAM interface from its bulk value, while no such depletion occurred for hexadecane. This difference in contact may explain the lack of an odd-even variation in the wetting characteristics of water on these surfaces, because the water molecules are positioned further away from the surface and, therefore, are not sensitive to the structural differences in the average orientations for the terminal methyl groups in odd- and even-chained SAMs. In contrast, the differences in the wetting properties of hexadecane on the odd- and even-chained SAMs may reflect the closer proximity of these molecules to the SAM surface and a resulting greater sensitivity to the differences in the terminal methyl group orientations in the SAMs. SAM-solvent interaction energies were calculated during the MD simulations, yielding interaction energies that differed on the even- and odd-chained surfaces by approximately 10% for hexadecane and negligibly for water, in accord with estimates using experimental wetting results.  相似文献   

16.
We report a systematic theoretical study on the growth pattern and electronic properties of acetonitrile clusters [(CH(3)CN)(n) (n = 1, 9, 12)] using density functional approach at the B3LYP6-31++G(d,p) level. Although we have considered a large number of configurations for each cluster, the stability of the lowest energy isomer was verified from the Hessian calculation. It is found that the lowest energy isomer of the dimer adopts an antiparallel configuration. For trimer and tetramer, cyclic ring structures were found to be favored over the dipole stabilized structure. In general, it is found that the intermolecular CH...N interactions play a significant role in the stabilization of the cyclic layered geometry of acetonitrile clusters. A critical comparison between trimer and tetramer clusters suggests that the three member cyclic ring is more stable than four member rings. The growth motif for larger clusters (n = 5-9, 12) follows a layered pattern consisting of three or four membered rings, which, in fact, is used as the building block. Based on the stability analysis, it is found that clusters with an even number of molecular entities are more stable than the odd clusters, except trimer and nonamer. The exceptional stability of these two clusters is attributed to the formation of trimembered cyclic rings, which have been found to form the building blocks for larger clusters.  相似文献   

17.
含酰胺结构的巯基自组装膜的设计与结构表征   总被引:11,自引:0,他引:11  
提出了一种简便通用的合成巯基化合物的途径,以分子中的羧基CO2H为起始基团,与2-流基乙胺的氨基选择性缩合;合成了一系列具有RC(O)NHCH2CH2SH(R分别为偶氯苯衍生物,双炔衍生物及直链烷基)结构的化合物,并用接触角测量,电化学和掠角反射红外光谱(GIR-IR)等手段对这些化合物在金表面形成的自组装单分子膜进行了表征。发现4-(N-(2‘-巯基已基))酰胺偶氮苯的自组装膜表现出良好的电活性,电化学测定表面浓度为4.21×10(-10)mol·cm(-2).当R为烷基链时,随烷基链的增长,膜的致密度与有序度增加GIR-IR证明在自组装腹中CH3(CH2)6C(O)NHCH2CH2SH的C=O和N-H键与Au表面平行,分子轴线与Au表面近似垂直.  相似文献   

18.
Electron transfer (ET) rate kinetics through n-alkanethiol self-assembled monolayers (SAMs) of alkanethiols of different chain lengths [Me(CH2)nSH; n=8, 10, 11, 15] on Au and Hg surfaces and ferrocene (Fc)-terminated SAMs (poly-norbornylogous and HS(CH2)12CONHCH2Fc) on Au were studied using cyclic voltammetry and scanning electrochemical microscopy (SECM). The SECM results allow determination of the ET kinetics of solution-phase Ru(NH3)63+/2+ through the alkanethiol SAMs on Au and Hg. A model using the potential dependence of the measured rate constants is proposed to compensate for the pinhole contribution. Extrapolated values of koML for Ru(NH3)63+/2+ using the model follow the expected exponential decay (beta is 0.9) for different chain lengths. For a Fc-terminated poly-norbornyl SAM, the standard rate constant of direct tunneling (ko is 189+/-31 s(-1)) is in the same order as the ko value of HS(CH2)12CONHCH2Fc. In blocking and Fc SAMs, the rates of ET are demonstrated to follow Butler-Volmer kinetics with transfer coefficients alpha of 0.5. Lower values of alpha are treated as a result of the pinhole contribution. The normalized rates of ET are 3 orders of magnitude higher for Fc-terminated than for blocking monolayers. Scanning electron microscopy imaging of Pd nanoparticles electrochemically deposited in pinholes of blocking SAMs was used to confirm the presence of pinholes.  相似文献   

19.
Impact of fullerene ions (C(60)(-)) on a metallic surface at keV kinetic energies and under single collision conditions is used as an efficient way for generating gas phase carbide cluster ions of gold and silver, which were rarely explored before. Positively and negatively charged cluster ions, Au(n)C(m)(+) (n = 1-5, 1 ≤ m ≤ 12), Ag(n)C(m)(+) (n = 1-7, 1 ≤ m ≤ 7), Au(n)C(m)(-) (n = 1-5, 1 ≤ m ≤ 10), and Ag(n)C(m)(-) (n = 1-3, 1 ≤ m ≤ 6), were observed. The Au(3)C(2)(+) and Ag(3)C(2)(+) clusters are the most abundant cations in the corresponding mass spectra. Pronounced odd/even intensity alternations were observed for nearly all Au(n)C(m)(+/-) and Ag(n)C(m)(+/-) series. The time dependence of signal intensity for selected positive ions was measured over a broad range of C(60)(-) impact energies and fluxes. A few orders of magnitude immediate signal jump instantaneous with the C(60)(-) ion beam opening was observed, followed by a nearly constant plateau. It is concluded that the overall process of the fullerene collision and formation∕ejection of the carbidic species can be described as a single impact event where the shattering of the incoming C(60)(-) ion into small C(m) fragments occurs nearly instantaneously with the (multiple) pickup of metal atoms and resulting emission of the carbide clusters. Density functional theory calculations showed that the most stable configuration of the Au(n)C(m)(+) (n = 1, 2) clusters is a linear carbon chain with one or two terminal gold atoms correspondingly (except for a bent configuration of Au(2)C(+)). The calculated AuC(m) adiabatic ionization energies showed parity alternations in agreement with the measured intensity alternations of the corresponding ions. The Au(3)C(2)(+) ion possesses a basic Au(2)C(2) acetylide structure with a π-coordinated third gold atom, forming a π-complex structure of the type [Au(π-Au(2)C(2))](+). The calculation shows meaningful contributions of direct gold-gold bonding to the overall stability of the Au(3)C(2)(+) complex.  相似文献   

20.
Effects of changing the interparticle separation on the surface plasmon bands of ultrathin films of gold nanoparticles have been investigated by examining the interaction of alkanethiols of varying chain length on nanocrystalline gold films generated at the organic-aqueous interface. Adsorption of alkanethiols causes blue-shifts of the surface plasmon adsorption band, the magnitude of the shift being proportional to the chain length. The disordered nanocrystals thus created (lambdamax, 530 m) are in equilibrium with the ordered nanocrystals in the film (lambdamax, 700 m) as indicated by an isosbestic point around 600 nm. Long chain thiols disintegrate or disorder the gold films more effectively, as demonstrated by the increased population of the thiol-capped gold nanocrystals in solution. The rate of interaction of the thiols with the film decreases with the decreasing chain length. The effect of an alkanethiol on the spectrum of the gold film is specific, in that the effects with long and short chains are reversible. The changes in the plasmon band of gold due to interparticle separation can be satisfactorily modeled on the basis of the Maxwell-Garnett formalism. Spectroscopic studies, augmented by calorimetric measurements, suggest that the interaction of alkanethiols involves two steps, the first step being the exothermic gold film-thiol interaction and the second step includes the endothermic disordering process followed by further thiol capping of isolated gold particles.  相似文献   

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