配体间相互作用研究: 氨基酸与二肽配体形成 质子复合物的稳定性

用pH电位滴定法测定了苯丙氨酰亮氨酸(PL)与甘氨酸(Gly)、丙氨酸(Ala)、缬氨酸(Val)、亮氨酸(Leu)、异亮氨酸(Ile)、苯丙氨酸(Phe)在离子强度为0.1mol/L(NaNO~3),(25.0±0.1)℃时形成质子复合物的稳定常数,并对苯丙氨酰亮氨酸与六种氨基酸相互作用体系进行了量子化学和分子力学计算。从配体间弱相互作用的观点,讨论了二肽配体对氨基酸分子的识别。结果表明,二肽与氨基酸配体间的结合主要受到配体间静电、氢键作用的控制,同时受到范德华力和键间排斥能等弱相互作用的影响。     

Investigation of ion binding in ionic polysaccharide solutions using Tb(III) as a luminescent probe

The luminescence properties of a series of lanthanide-substituted ionic polysaccharides have been examined in an attempt to learn about the nature of interactions between the metalions and the polymers. Emission and excitation spectra were obtained for Tb(III) complexes with carboxymethyl cellulose, Sclerox S-1.0, alginate, polygalacturonic acid, amylose sulfate, dextran sulfate, and i-carrageenan. Studies of the chirality associated with the metal-ion binding sites were performed through the use of circularly polarized luminescence spectroscopy. It was learned that the lanthanide ions could form complexes with polysaccharides in the electrostatic manner of polyelectrolytes, and that specific ligating groups could further influence the metal-ion binding characteristics.     

Ionic Mixed Interactions in Macromolecules

Purely ionic interactions in natural and synthetic macromolecules involve the mutual interaction of fixed charges and their interaction with mobile ions. Such charge‐dependent interactions lead to well‐documented effects, including chain expansion of polyelectrolytes, globularization of polyampholytes, distributions of mobile ions according to charge screening, or ion condensation models. A variety of structural features, functions, and applications of these systems is amplified by the superimposition of charge‐independent effects associated with the occurrence of less polar or hydrophobic groups, special salts, surfactants, or complementary protein assemblies. For instance, ionic and hydrophobic attractive interactions stabilize pearls (or rings)‐on‐a‐string conformations, possibly a model for the formation of the chromatin assembly. The attractive interactions due to hydrophobic fatty acid groups attached to polysaccharides promote the formation of vesicles that entrap and slowly release water‐soluble drugs. Intra‐ and intermolecular associations based on ion‐pairing mixed interactions also control the formation of host–guest compounds, protein conformation, and the assembly of layered polyelectrolytes. Metallo‐supramolecular polymers and networks are formed due to the coordination of multivalent cations with bi‐ and trifunctional organic ligands. The association of lithium salts to polymers in the absence of water allows the formation of highly efficient energy sources. It also allows the identification of the ionic species that control charge‐independent contributions to Hofmeister effects. This critical review presents a synthetic classification of systems displaying ionic mixed interactions, and a discussion of underlying molecular mechanisms.     

Protein-Polysaccharide Interactions for Stabilization of Food Emulsions

Proteins, polysaccharides and their blends, as examples of natural biopolymers, are surface active materials. Biopolymers may be considered as amphiphilic macromolecules that play an essential role in stabilizing food formulations (foams, emulsions and dispersions). Under specific conditions (such as protein-to-polysaccharide ratio, pH, ionic strength, temperature, mixing processing), it has been stated that proteins and polysaccharides form hybrids (complexes) with enhanced functional properties in comparison to the proteins and polysaccharides alone. Different protein-polysaccharide pairs are reviewed with particular attention to the emulsification capability of their mixtures. In the case of uncomplexed blends of biopolymers, competitive adsorption onto hydrophobic surfaces is generally reported. Conversely, electrostatic complexation between oppositely charged proteins and polysaccharides allows better anchoring of the new-formed macro-molecular amphiphile onto oil-water interfaces. Moreover, improved thermal stability and increased resistance to external treatment (high pressure) involved in food processing are obtained. This review presents basic and applied knowledge on protein-polysaccharide interactions in aqueous medium and at the oil-water interface in food emulsion systems. Electrostatic interactions and thermodynamic incompatibility in mixed biopolymer solutions are correlated to the functional properties (rheology, surface hydrophobiciry, emulsification power) of these interesting blends. Basic and industrial selected systems of different families of hydrocolloids (as gum Arabic, galactomannans, pectins) and protein (caseins, whey, soya, gelatin) mixtures are reviewed.     

Molecular structures, hydrogen bonding and electrostatic interactions of 3-(2-bromo-pyridinium)-propionic acid and 3-(pyridinium)-pivalic acid halides

Intra- and intermolecular interactions and the conformations of 3-(2-bromo-pyridinium)-propionic acid bromide (1) and 3-(pyridinium)-pivalic acid chloride (2) have been studied by X-ray diffraction and theoretically. In these complexes, Br⁻ and Cl⁻ anions are H-bonded to the COOH group and interact electrostatically with the positively charged nitrogen atoms of neighbouring molecules. To analyse these interactions theoretically, the structures of monomers and dimers in various configurations were optimized by PM3 and BLYP/6-31G(d,p) methods. The analysis confirmed the vital role of both the H-bonds and electrostatic interactions (intra- and intermolecular) for the molecular conformation and the ionic aggregation in the solid state.     

蛋白质与高分子的自组装

蛋白质是一类具有独特三维空间结构的生物高分子,其分子内部非共价键协同作用是形成三维空间结构的重要驱动力。同时,蛋白质分子与其他高分子之间也可以通过非共价键作用实现自组装。高分子链和蛋白质的结构特征是实现自组装的关键,溶液pH值、离子强度以及温度的变化会影响它们之间非共价键作用的类型和强度。本文归纳了水溶性高分子、嵌段共聚物和多糖与球状蛋白自组装的最新研究进展,分别从分子结构特征和溶液性质等因素讨论了其对高分子与蛋白质实现自组装的影响。其中,多糖与蛋白质的非共价键作用是化学与生物科学交叉领域最为活跃的研究课题之一,通过研究蛋白质与其他高分子的非共价键作用,对于理解和认识生命过程的本质与规律具有重要的意义,同时,在材料科学、纳米技术、食品科学等相关领域具有重要的应用价值。     

Employment of detergent-tag/solute interactions in capillary electrophoresis of neutral polysaccharides

Neutral and inherently immobile polysaccharides are induced to migrate in an electric field through interactions with a detergent added to the electrophoretic electrolyte buffer. Before analysis the polysaccharides are converted to fluorescent derivatives to enable detection, but choice of a tag can also be utilized for modulation of the electrophoretic mobility. Three cases are discussed and exemplified, namely detergent-solute, detergent-solute+tag, and detergent-tag interactions. Anionic as well as cationic surfactants were exploited along with different derivatization reagents. Depending on the approach chosen, different kinds of information about sample composition and distribution(s) can be obtained, including degree of substitution, distribution of molecular weight (obtained in free solution without sieving media) and polymer conformation. A shift in polymer conformation upon a change in solvent composition can be monitored.     

Qualitative comparison between the quantum calculations and electrospray mass spectra o complexes of polyammonium macrotricyclic ligands with dicarboxylic acids

The host-guest interactions play a very important role in chemical and biological processes. It is therefore important to be able to characterize these complexes. Electrospray mass spectrometry can be used to characterize the complex formation. It provides information on the mass and the charge of these ionic complexes. In this article, we show that the use of ab initio and semiempirical calculations, in addition to the results obtained by electrospray mass spectrometry, reveal to be a promising tool for the study of these noncovalent complexes. In this article, host-guest complexes formed by macropolycyclic polyammonium host molecules and dicarboxylic acids are studied.     

Formation and structural heat-stability of β-lactoglobulin/surfactant complexes

The binding of two model surfactants, sodium dodecyl sulfate and dodecyltrimethylammonium bromide to β-lactoglobulin was studied at room temperature and the thermal stability of the resulting complexes was evaluated by differential scanning calorimetry (DSC) measurements. Binding isotherms indicated both ionic and hydrophobic interactions depending on both the charge of the protein and surfactant at different pHs and on the binding molar ratios of surfactant to the globular protein. Zeta potential measurements indicated charge neutralisation of the protein, under suitable conditions, which also lead to aggregation and precipitation of the proteins. Surface tension measurements indicated similarity between the two types of oppositely charged protein-surfactant complexes and a difference between them when protein and surfactants are similarly charged. DSC measurements revealed different behavior in protein conformation in the presence of the two surfactants. The results obtained at room temperature and upon heating are discussed in terms of the nature of the surfactant/protein interactions involved in the complex formation.     

气相色谱手性固定相研究进展

本文评述了气相色谱手性分离的发展过程,介绍了氨基酸、二肽、金属配合物、环糊精、多糖、手性离子液体、环肽、键合以及交联类气相色谱手性固定相以及各类型的拆分机理,展望了气相色谱手性固定相的研究前景.     

气相色谱手性固定相研究进展

本文评述了气相色谱手性分离的发展过程,介绍了氨基酸、二肽、金属配合物、环糊精、多糖、手性离子液体、环肽、键合以及交联类气相色谱手性固定相以及各类型的拆分机理,展望了气相色谱手性固定相的研究前景。     

Heparin-protein interactions

Heparin, a sulfated polysaccharide belonging to the family of glycosaminoglycans, has numerous important biological activities, associated with its interaction with diverse proteins. Heparin is widely used as an anticoagulant drug based on its ability to accelerate the rate at which antithrombin inhibits serine proteases in the blood coagulation cascade. Heparin and the structurally related heparan sulfate are complex linear polymers comprised of a mixture of chains of different length, having variable sequences. Heparan sulfate is ubiquitously distributed on the surfaces of animal cells and in the extracellular matrix. It also mediates various physiologic and pathophysiologic processes. Difficulties in evaluating the role of heparin and heparan sulfate in vivo may be partly ascribed to ignorance of the detailed structure and sequence of these polysaccharides. In addition, the understanding of carbohydrate-protein interactions has lagged behind that of the more thoroughly studied protein-protein and protein-nucleic acid interactions. The recent extensive studies on the structural, kinetic, and thermodynamic aspects of the protein binding of heparin and heparan sulfate have led to an improved understanding of heparin-protein interactions. A high degree of specificity could be identified in many of these interactions. An understanding of these interactions at the molecular level is of fundamental importance in the design of new highly specific therapeutic agents. This review focuses on aspects of heparin structure and conformation, which are important for its interactions with proteins. It also describes the interaction of heparin and heparan sulfate with selected families of heparin-binding proteins.     

A screened hybrid density functional study on energetic complexes: Alkaline-earth metal carbohydrazide perchlorates

The molecular geometries, electronic structures and stabilities of a series of alkaline-earth metal carbohydrazide perchlorates were investigated using the Heyd–Scuseria–Ernzerhof (HSE) screened hybrid density functional. The results show that Be and Mg complexes have six-coordinated octahedron features, as previously reported for the transition metal complexes. However, Ca, Sr and Ba complexes have additional coordinated oxygen atoms from the perchlorate ion. Detailed NBO analyses indicate that the metal–ligand interactions are essentially ionic and play an important role in the stabilities of these energetic complexes. The donor–acceptor interactions result in a reduction of occupancies of σ_C=O and σ_N–H bond orbitals, and also their subsequent impact on bond length and bond order.     

Multiple Charge-Transfer Transitions in Alkylbenzene-TCNE Complexes

Several alkylbenzene-TCNE complexes are reinvestigated, yielding improved ground state thermodynamic parameters. The effect of competing solvent complexation with the acceptor is also considered. The experimental CT-band profiles for the complexes in solution and in the gas phase are deconvoluted into two (theoretically expected) CT-subbands, furnishing accurate energies of the first and second CT-state of the systems. Comparison with the corresponding donor IP's leads to insight into the preferred ground state conformation of the complexes. The thermodynamics of ionic photodissociation of the complexes is evaluated as a function of solvation and the results compared with recent experimental work.     

A screened hybrid density functional study on energetic complexes: Metal carbohydrazide nitrates

The molecular geometry, electronic structure and thermochemistry of a series of metal carbohydrazide nitrates were investigated using the Heyd–Scuseria–Ernzerhof (HSE) screened hybrid density functional. The results show that Ca, Sr, and Ba complexes have additional coordinated oxygen atoms from the nitrate ion, which differ obviously from Cu, Ni, Co, and Mg complexes in terms of the geometric structure. Detailed NBO analyses clearly indicate that the metal–ligand interactions in Cu, Ni, and Co complexes are covalent, whereas those of Mg, Ca, Sr, and Ba complexes are ionic in nature. Furthermore, the donor–acceptor interactions result in a reduction of occupancies of σ_{C? O} and σ_{N? H} orbitals. Consequently, the bond lengths increase and the bond orders decrease. Finally, the calculated heats of formation predict that the ionic alkaline‐earth metal carbohydrazide nitrates are more stable than the covalent transition metal carbohydrazide nitrates. It agrees well with the available experimental thermal stabilities, indicating that the metal–ligand bonding character plays an important role in the stabilities of these energetic complexes. © 2010 Wiley Periodicals, Inc. Int J Quantum Chem, 2011     

Molecular Dynamics Approaches Dissect Molecular Mechanisms Underlying Methylene Blue–Glycosaminoglycan Interactions

Glycosaminoglycans (GAGs) are a class of periodic anionic linear polysaccharides involved in a number of biologically relevant processes in the extracellular matrix via interactions with various types of molecules including proteins, peptides and small organic molecules. The metachromatic dye methylene blue (MB) is a GAG binding agent. This molecule possesses a tricyclic, monocationic phenothiazine ring system, while the terminal methyl groups attached to the nitrogen atoms bear the most positive charges of the cation and, therefore, represent potential binding sites for negatively charged GAGs. In this study, we rigorously explored molecular mechanisms underlying these interactions for several GAG types: heparin, heparan and chondroitin sulfates. We found that GAG–MB interactions are predominantly electrostatically driven, with the particularly important role of sulfate groups. MB oligomeric stack formation was favored in the presence of GAGs. Furthermore, the impact of MB binding on the conformation of GAGs was also evaluated. The novel results allow for better quantitative analytics of GAG composition in the studied biochemical systems using MB dye as a GAG-specific marker. Our data add to the knowledge on small molecule–GAG interactions and could be potentially useful for novel developments in drug design and putative disease therapies in which GAGs are involved.     

Polysaccharide charge density regulating protein adsorption to air/water interfaces by protein/polysaccharide complex formation

Because the formation of protein/polysaccharide complexes is dominated by electrostatic interaction, polysaccharide charge density is expected to play a major role in the adsorption behavior of the complexes. In this study, pullulan (a non-charged polysaccharide) carboxylated to four different charge densities (fraction of carboxylated subunits: 0.1, 0.26, 0.51, and 0.56) was used to investigate the effect of charge density on the properties of mixed protein/polysaccharide adsorbed layers at air/water interfaces. With all pullulan samples, soluble complexes with beta-lactoglobulin could be formed at low ionic strength, pH 4.5. It was shown that the higher was the pullulan charge density, the more the increase of surface pressure in time was retarded as compared to that for pure beta-lactoglobulin. The retardation was even more pronounced for the development of the dilatational modulus. The lower dilatational modulus can be explained by the ability of the polysaccharides to prevent the formation of a compact protein layer at the air/water interface due to electrostatic repulsion. This ability of the polysaccharides to prevent "layer compactness" increases with the net negative charge of the complexes. If charge density is sufficient (> or = 0.26), polysaccharides may enhance the cohesion between complexes within the adsorbed layer. The charge density of polysaccharides is shown to be a dominant regulator of both the adsorption kinetics as well as the resulting surface rheological behavior of the mixed layers formed. These findings have significant value for the application of complex protein-polysaccharide systems.     

Titration of hydrophobic polyelectrolytes using Monte Carlo simulations

The conformation and titration curves of weak (or annealed) hydrophobic polyelectrolytes have been examined using Monte Carlo simulations with screened Coulomb potentials in the grand canonical ensemble. The influence of the ionic concentration pH and presence of hydrophobic interactions has been systematically investigated. A large number of conformations such as extended, pearl-necklace, cigar-shape, and collapsed structures resulting from the subtle balance of short-range hydrophobic attractive interactions and long-range electrostatic repulsive interactions between the monomers have been observed. Titration curves were calculated by adjusting the pH-pK(0) values (pK(0) represents the intrinsic dissociation constant of an isolated monomer) and then calculating the ionization degree alpha of the polyelectrolyte. Important transitions related to cascades of conformational changes were observed in the titration curves, mainly at low ionic concentration and with the presence of strong hydrophobic interactions. We demonstrated that the presence of hydrophobic interactions plays an important role in the acid-base properties of a polyelectrolyte in promoting the formation of compact conformations and hence decreasing the polyelectrolyte degree of ionization for a given pH-pK(0) value.     

菌类多糖链构象及其表征方法研究进展 （专题报道）

 概述了菌类多糖在溶液中链构象及其表征方法的研究进展.主要报道从各种真菌（香菇、茯苓、灵芝、木耳、黄单胞菌、裂褶菌等）中提取的多糖在溶液中的分子量、分子形态和尺寸,即链构象.同时介绍多糖链构象对生物活性的影响,并且指出多糖刚性链带电基团及适量分子量有利于促进它与免疫细胞上受体结合,从而抑制肿瘤细胞增殖.由此表明,多糖链构象的研究对弄清其生物功能和推动生命科学发展十分重要.多糖在溶液中主要以无规线团、双螺旋、三螺旋、蠕虫状、棒状链以及聚集体构象存在,它取决于单糖组成、糖苷键、支链结构以及分子内和分子间作用力.测定链构象的方法主要包括光散射、黏度、显微技术（透射电镜,扫描电镜以及原子力显微镜）、微量热法和小角X-射线散射等.此外,介绍了多糖溶液理论以及计算链构象参数的表达式.