PHOTOSENSITIZATION BY ANTIMALARIAL DRUGS

Abstract The antimalarial drugs, chloroquine, hydroxychloroquine, quinine, quinacrine, amodiaquine and primaquine and the local anaesthetic, dibucaine, were tested for in vitro photosensitizing capability by irradiation with 365 nm UV light in aqueous solutions. The ability of these compounds to photosensitize the oxidation of 2,5-dimethylfuran, histidine, tryptophan or xanthine, and to initiate the free radical polymerization of acrylamide was examined in the pH range 2-12. Chloroquine and hydroxychloroquine show maximal photooxidative behaviour when in the monocation form at pH 9, in contrast to quinine which is extremely efficient as the dication below pH 4. This pattern appears to relate to the fluorescence yield as a function of pH. Chloroquine in the monocation or neutral form was found to undergo dechlorination upon irradiation, and this correlates directly with its ability to initiate photo-polymerization of acrylamide. Quinine also gives rise to small polymerization rates, attributed to photo-ionization in the quinoline ring, yielding a cation radical. Amodiaquine, primaquine and quinacrine do not have significant photochemical activity in aqueous solution. Dibucaine exhibits a strong photosensitizing capability at low pH, similar to quinine.     

6-Membered pseudocyclic IBX acids: syntheses, X-ray structural characterizations, and oxidation reactivities in common organic solvents

We designed and synthesized λ(5)-cyclic periodinanes 1 and 2, which are homologous to IBX (1-hydroxy-1-oxo-1H-1λ(5)-benzo[d][1,2]iodoxol-3-one) by one carbon, to thwart close packing of molecules in the crystal lattice to permit solubility in common organic solvents and to facilitate oxidations with enhanced reactivity. The X-ray crystal structures revealed that both 1 and 2 exist in the solid state as pseudocyclic (PC) acids, i.e., 1PC and 2PC, and that the molecules in the lattice are less weakly associated as compared to those in the parent IBX due to the twisting introduced via the sp(3) benzylic carbon. Both 1PC and 2PC are found to dissolve in palpable amounts in DCM and acetonitrile to allow oxidation of a variety of alcohols and sulfides to carbonyl compounds and sulfoxides in a facile manner. The subtle differences in the sterics due to methyl and ethyl substituents in 1PC and 2PC are found to manifest in contrasting reactivities in that the oxidations of alcohols occur faster with 2PC, while those of sulfides to sulfoxides occur more rapidly with 1PC.     

Analytical strategies to determine antibiotic residues in fish

The accelerated growth of aquaculture has resulted in a series of harmful effects to human health. The widespread and unrestricted use of antibiotics in this industry, to prevent bacterial infections, leads to remaining amounts in the aquatic environment. This has resulted in the emergence of antibiotic-resistant bacteria in aquaculture environments, in the increase in antibiotic resistance in fish pathogens as well as in the transfer of these resistance determinants to human pathogens. Moreover, the use of large amounts of antibiotics may lead to the presence of residual antibiotics in fish tissue and fish products. Fluoroquinolones, tetracyclines, penicillins, sulphonamides and other antibiotics, exhibiting activity against both Gram-positive and Gram-negative bacteria, are widely used for the treatment and prevention of diseases in fish. An extended and comprehensive review on the recent analytical methodologies concerning antibiotic residues in fish reported in the literature is provided in the present article. Emphasis is given on sample preparation regarding isolation and purification, chromatographic conditions and method validation according to legislation. Results of published assays are comparatively presented and criticised.     

Voltammetric determination of platinum in perfusate and blood: Preliminary data on pharmacokinetic study of arterial infusion with oxaliplatin

Because Platinum Group Elements have found widespread use in catalytic converters in cars and as chemotherapeutic agent, interest in the development of reliable analytical methods is carried out in order to monitor these analita in humans to protect the citizen's health.Considering that information on the levels of many trace elements in biological matrices is scarce and for many non-essential elements, baseline levels in the population, and especially in those particularly exposed to the risk are lacking, in this paper we optimize an analytical method for biological matrices, using a voltammetric technique to measure the concentration of Pt in blood and perfusate.The amount of Pt recovered from the blood and perfusate samples spiked with analita was observed to be meanly of 95% with 5–6% of R.S.D. These results indicated that proposed method for the determination of platinum in biological materials is accurate and reproducible.The amounts of platinum found in the blood samples of common ranged citizen were similar to quantification limit while in the patients the concentration ranged from 1.5 to 360 μg/L, in perfusate ranged from 0.7 to 9700 μg/l. The concentrations of Pt of populace and in patients before of infusion are in agreement with the level measured in the blood of unexposed patients.The proposed analytical method permits to determine the amount of Pt in the perfusate and subsequently absorbed by the target organs in order to determine the dose and timing of treatment and to avoid overdoses with related undesired effects.     

杨石先对农药化学学科的重要贡献及其学术思想

杨石先先生一生献身于我国的教育事业与化学学科的发展,在62年中为我国培养了无数高质量的科教人才。他除了长期担任南开大学校长之外, 还创建了我国大学第一个专职研究所,即元素有机化学研究所。他率先开展了我国元素有机化学与农药化学的科学研究,领导了元素有机化学国家重点实验室的建立,是我国元素有机化学和农药化学的奠基人和开拓者。他倡导用有机化学的专业知识,科学和系统地开展农药化学研究,组建队伍获得20项科研成果,发表上百篇科学与论述性论文,为我国开展自主创新农药研究事业作出重要贡献。在农药化学学科的学术思想中,他强调要弄清该学科的交叉性、系统性和内在规律性,倡导要学习国际先进经验,要结合国情自主创新,要为国家经济服务,要对世界农药科技做出贡献。他毕生对人才培养给予了特别的重视,为我国科技事业持续发展作出了重大贡献。     

Application of Biomarkers to Assessment of Risk to Human Health from Exposure to Mycotoxins

Mycotoxins, the toxic compounds produced by mold secondary metabolism, represent a relevant source of danger to humans through alimentary channels. Efforts have been made by researchers and by national authorities to assess mycotoxin incidence in food, but often results are to be considered approximate or inaccurate due to the huge difficulties posed by sampling procedures. More recently the evaluation of mycotoxins in biological fluids have been given increasing attention since the results may offer valuable indications, although general on the overall status of mycotoxin contamination in food and feed. The assessment of the degree of exposure to these contaminants in the population or in specific groups can also be pursued. Researches on mycotoxins in biological fluids greatly contribute to clarify the mechanism of health impairment attributable to these toxic compounds and to elucidate the dose–response relationship. Despite the considerable efforts devoted to mycotoxin research in the past few decades, improvements in methodology has to be achieved mainly in sampling procedures and in quality assurance of the laboratories involved in mycotoxin analysis, as well as in the selection of appropriate biomarkers.     

Hygienic aspects related to burial

Burial grounds are generally provided by local authorities in cemeteries (subject to planning consent and to compliance with any considerations for environmental health). Their design has been submitted to studies of hydrogeological characteristics of soil with regard to its ability to purify wastewater coming from corpse decomposition, its ability to avoid the infiltration of pollutants in groundwater, and its ability to skeletonize buried corpses within the given times foreseen by the law in force. Greater environmental awareness has necessitated that new and existing burial grounds are assessed to determine the environmental load which they could release to soil or any downstream component. This problem arises in countries where there is a high density of built-up areas, a custom of disposing of the dead by burial, a lack of available spaces and suitable soils to designate as burial grounds. This paper reports some results from a study carried out on ground lands of Italy in order to revise articles 82 and 83 of the Decree No 285 of 1990 in force in relation to burial grounds. Soil permeability to water and air is a parameter of critical importance in relation to purification and/or diffusion of leachates from inhumed corpses in the soil, and in relation to its influence on the time necessary to completely skeletonize a human corpse.     

Structural changes in discotic samples during transition from crystal to discotic mesophase as revealed by electron microscopy and diffraction

Classical methods of structural analysis cannot be applied to liquid crystals because higher order reflections disappear during the transition from crystal to liquid crystal due to the reduction in long range orientational and translational correlations. However, in order to relate physical properties to the molecular architecture, it is essential to have information about molecular positions and orientations in the crystalline state as well as in the liquid crystalline state. In this work, the transition from crystalline to liquid crystalline phase is carefully monitored and the relationship between the original lattice and the new molecular positions found using electron diffraction. In addition to this, a new high resolution electron-microscopic technique is described in which the positions of molecules in the crystalline and the quenched discotic phase are directly imaged and the defects observed in the crystalline and LC phase compared and quantitatively analysed.     

Lab-on-chip methodologies for the study of transport in porous media: energy applications

We present a lab-on-chip approach to the study of multiphase transport in porous media. The applicability of microfluidics to biological and chemical analysis has motivated much development in lab-on-chip methodologies. Several of these methodologies are also well suited to the study of transport in porous media. We demonstrate the application of rapid prototyping of microfluidic networks with approximately 5000 channels, controllable wettability, and fluorescence-based analysis to the study of multiphase transport phenomena in porous media. The method is applied to measure the influence of wettability relative to network regularity, and to differentiate initial percolation patterns from active flow paths. Transport phenomena in porous media are of critical importance to many fields and particularly in many energy-related applications including liquid water transport in fuel cells, oil recovery, and CO(2) sequestration.     

Copolymerization of styrene. III. Physical and mechanical properties of copolymers with styrene derivatives containing nitrile groups in the side chain

Copolymers of styrene with cinnamonitrile (I), ethyl benzylidenecyanoacetate (II), and benzylidenemalononitrile (III) were prepared in bulk, in suspension, and in emulsion up to high conversion. Their softening points, flexural properties, impact resistance, hardness, and volumetric shrinkage due to polymerization were studied. All three copolymers show improved thermal resistance in comparison to polystyrene, but whereas copolymers styrene–I and styrene–III are inferior to polystyrene in flexural strength and the impact resistance, the copolymer styrene–II is about equal to polystyrene in its flexural properties and impact resistance.     

Atomistic band gap engineering in donor-acceptor polymers

We have synthesized a series of cyclopentadithiophene-benzochalcogenodiazole donor-acceptor (D-A) copolymers, wherein a single atom in the benzochalcogenodiazole unit is varied from sulfur to selenium to tellurium, which allows us to explicitly study sulfur to selenium to tellurium substitution in D-A copolymers for the first time. The synthesis of S- and Se-containing polymers is straightforward; however, Te-containing polymers must be prepared by postpolymerization single atom substitution. All of the polymers have the representative dual-band optical absorption profile, consisting of both a low- and high-energy optical transition. Optical spectroscopy reveals that heavy atom substitution leads to a red-shift in the low-energy transition, while the high-energy band remains relatively constant in energy. The red-shift in the low-energy transition leads to optical band gap values of 1.59, 1.46, and 1.06 eV for the S-, Se-, and Te-containing polymers, respectively. Additionally, the strength of the low-energy band decreases, while the high-energy band remains constant. These trends cannot be explained by the present D and A theory where optical properties are governed exclusively by the strength of D and A units. A series of optical spectroscopy experiments, solvatochromism studies, density functional theory (DFT) calculations, and time-dependent DFT calculations are used to understand these trends. The red-shift in low-energy absorption is likely due to both a decrease in ionization potential and an increase in bond length and decrease in acceptor aromaticity. The loss of intensity of the low-energy band is likely the result of a loss of electronegativity and the acceptor unit's ability to separate charge. Overall, in addition to the established theory that difference in electron density of the D and A units controls the band gap, single atom substitution at key positions can be used to control the band gap of D-A copolymers.     

Determination,by inductively coupled plasma mass spectrometry,of changes in cellular metal content resulting from herpes simplex virus-1 (HSV-1) infection

Metals and metal-containing compounds are known to play important roles in many biological processes, including metabolic and detoxification pathways and the formation and function of proteins. Like all organisms, viruses are expected to contain different metals. These metals, either by themselves or in the form of metalloproteins, may be involved in the virus’s ability to infect healthy cells and replicate within them. Identification and speciation of metals in control cells and in cells affected by a virus could be helpful in elucidating infection and replication mechanisms; these might, in turn, be vital to the development of more effective treatments. There has, however, been no extensive investigation of the metals specific viruses contain or affect. The objective of this study was to investigate changes in cellular metal content resulting from herpes simplex virus 1 (HSV-1) infection. Inductively coupled plasma mass spectrometry was used to identify differences between metal concentrations in uninfected and HSV-1-infected mammalian cells. Although it can be assumed that decreases in metal content are a result of cellular response to the virus, increases can be attributed either to cellular response or to the HSV-1 virus itself. Microwave digestion and flow injection methods suitable for small sample volumes were used, and the effects of different virus inactivation procedures were explored. This work is the first step in the identification of metals pertinent to HSV-1 infection and lays the foundation for future studies concentrating on characterization of these metal-associated or containing molecules.     

PUMMERER REARRANGEMENTS OF ETHYL ETHYLTHIOMETHYL SULPHOXIDE

Abstract

Some Pummerer rearrangements, in which ethyl ethylthiomethyl sulphoxide (I) is supposed to react initially as a nucleophile, were investigated in connection with the observed decrease of basicity in this compound, due to electronic interaction between α-sulphur atom and sulphinyl group. In fact, it proved to be quite resistant to the acetic anhydride induced rearrangement, being totally recovered under conditions in which DMSO reacts. In more drastic condition, or when triethyloxonium tetrafluoroborate and sodium acetate was substituted for acetic anhydride, instead of the normal Pummerer product, ethyl orthotrithioformate (II) was produced. Although ethyl ethylthiomethyl sulphoxide appeared to be susceptible, in mild condition, to acqueous acid, instead of Pummerer reaction, hydrolysis to formaldehyde and diethyl disulphide took place. The suppression of the Pummerer rearrangement was also found to occur in the reaction with thionyl chloride, to afford ethyl chloromethyl sulphide (III). However, normal Pummerer rearrangement occured in the reaction of ethyl ethylthiomethyl sulphoxide with excess of some phenyl and para-phenylsubstituted magnesium bromides to lead to diethylmercaptals of the corresponding benzaldehydes (IV), in good yields.     

Fragment-based drug design: computational & experimental state of the art

Fragment-based screening is an emerging technology which is used as an alternative to high-throughput screening (HTS), and often in parallel. Fragment screening focuses on very small compounds. Because of their small size and simplicity, fragments exhibit a low to medium binding affinity (mM to μM) and must therefore be screened at high concentration in order to detect binding events. Since some issues are associated with high-concentration screening in biochemical assays, biophysical methods are generally employed in fragment screening campaigns. Moreover, these techniques are very sensitive and some of them can give precise information about the binding mode of fragments, which facilitates the mandatory hit-to-lead optimization. One of the main advantages of fragment-based screening is that fragment hits generally exhibit a strong binding with respect to their size, and their subsequent optimization should lead to compounds with better pharmacokinetic properties compared to molecules evolved from HTS hits. In other words, fragments are interesting starting points for drug discovery projects. Besides, the chemical space of low-complexity compounds is very limited in comparison to that of drug-like molecules, and thus easier to explore with a screening library of limited size. Furthermore, the "combinatorial explosion" effect ensures that the resulting combinations of interlinked binding fragments may cover a significant part of "drug-like" chemical space. In parallel to experimental screening, virtual screening techniques, dedicated to fragments or wider compounds, are gaining momentum in order to further reduce the number of compounds to test. This article is a review of the latest news in both experimental and in silico virtual screening in the fragment-based discovery field. Given the specificity of this journal, special attention will be given to fragment library design.     

The Role of Epigenetic Functionalization of Implants and Biomaterials in Osseointegration and Bone Regeneration—A Review

The contribution of epigenetic mechanisms as a potential treatment model has been observed in cancer and autoimmune/inflammatory diseases. This review aims to put forward the epigenetic mechanisms as a promising strategy in implant surface functionalization and modification of biomaterials, to promote better osseointegration and bone regeneration, and could be applicable for alveolar bone regeneration and osseointegration in the future. Materials and Methods: Electronic and manual searches of the literature in PubMed, MEDLINE, and EMBASE were conducted, using a specific search strategy limited to publications in the last 5 years to identify preclinical studies in order to address the following focused questions: (i) Which, if any, are the epigenetic mechanisms used to functionalize implant surfaces to achieve better osseointegration? (ii) Which, if any, are the epigenetic mechanisms used to functionalize biomaterials to achieve better bone regeneration? Results: Findings from several studies have emphasized the role of miRNAs in functionalizing implants surfaces and biomaterials to promote osseointegration and bone regeneration, respectively. However, there are scarce data on the role of DNA methylation and histone modifications for these specific applications, despite being commonly applied in cancer research. Conclusions: Studies over the past few years have demonstrated that biomaterials are immunomodulatory rather than inert materials. In this context, epigenetics can act as next generation of advanced treatment tools for future regenerative techniques. Yet, there is a need to evaluate the efficacy/cost effectiveness of these techniques in comparison to current standards of care.     

Impact of computational structure-based predictive toxicology in drug discovery

Computational tools for predicting toxicity have been envisioned to have the potential to broadly impact up on the attrition rate of compounds in pre-clinical drug discovery and development. An integrated approach of computer-assisted, predictive, and physico-chemical properties of a compound, along with its in vitro and in vivo analysis, needs to be routinely exercised in the lead identification and lead optimization processes. Starting with a good lead can save a lot of money and it can significantly reduce the entire drug discovery process. The journey towards triple R's- reduce, replace and refine, further proves to be successful in predicting adverse drug reactions in patients (or animals) enrolled in clinical trials. However, the impact of predictive toxicity analysis was modest and relatively narrow in scope, due to the limited domain knowledge in this field. It is important to note that advances within medical science and newer approaches in drug development will require predictive toxicology applications to be viable. The field of computational toxicology has been heading in a direction more relevant to human diseases by reducing the adverse drug reactions. Therefore, efforts must be directed to integrating these tools relevant to the goal of preventing undesired toxicity in pre-clinical trials followed by different phases of clinical trials.     

New Method Showing the Influence of Matrix Components in Leuconostoc mesenteroides Biofilm Formation

Studying biofilm formation and influence of the matrix composition was heavy because only old and long methods were employed up to now: confocal microscopy, fluorescent chemical markers, and/or dying techniques. In this context, an innovative tool, the BioFilm Ring Test, was here employed to explore the role of exopolysaccharides, proteins, and nucleic acids in the formation of biofilm by Leuconostoc mesenteroides. The principle is to add magnetic particles in the culture medium. When a biofilm is formed, particles are unable to migrate in the media to form a ring when a magnet is brought nearer to the well. Therefore, culture media supplemented with proteases, glycanases, and/or nucleases allowed us to identify the involvement of these substances in L. mesenteroides biofilm formation. The results permitted to demonstrate that dextran, proteins, and nucleic acids are implied in biofilm formation.     

Underground waters quality in the province of Lecce (Apulia, Southern Italy)

This paper shows the results of underground waters last monitoring in the province of Lecce (Apulia, Southern Italy). We carried out the physical-chemical characterization of the aquifers and their classification in accordance to limit values sanctioned by Italian legislation in force, by European directives and by FAO, in order to define their quality and to establish their possible use for drinkable and irrigation purposes. The attention has been focused on salinity evaluation and underground waters contamination phenomena, due to sea-water intrusion and to the use of fertilizers. Salinity and nitrates concentrations are high in a few wells. Iron and manganese concentrations are very high for almost every sample and this is due to corrosion phenomena of artesian wells metallic structure. For a better interpretation of data, multivariate statistical analysis has been used, in order to obtain the correlation among analytical results, soils hydro-geological properties and anthropic conditions.     

Acrylamide: considerations for risk management

The presence of acrylamide in many carbohydrate-rich foods is due to its formation during conventional heating and preparation methods. Although acrylamide is established to be a toxic substance, the implications to public health from the amounts found in food are not clear. A better scientific understanding is required to help determine whether, and to what extent, formal risk management action might be necessary. Since acrylamide in food was highlighted in 2002, numerous investigations and initiatives have been developed, including international collaborations across governments, industry, research organizations, and consumer representations. The newly generated information is being used to help the overall understanding of this issue. In particular, new information on health aspects will be important to update the scientific risk assessment. The basis for decisions on possible risk management measures would then be clearer. If future risk assessment concludes that the amounts of acrylamide in food can pose a health threat, then options for risk management will need to be considered, such as limits, guide levels, codes of practice, guidance information, and advice to the food and catering industries and to consumers. In the meantime, it is possible to benefit from progress already made on how acrylamide is formed in food and on ways to lower the amounts present. Raising awareness to the approaches that can reduce the presence of acrylamide in food should be encouraged. Where feasible, such approaches can be assessed for practical use in production, processing, and preparation of the relevant food products.