Chiral Non-racemic Bis(vicinal 1,2-Diamines): 4,5-Diamino-N-(3,4-diaminobutyl)pentanamide Tetrahydrochloride, N,N′-Bis[3,4-bis (t-butoxycarbonylamino)butyl]urea and N,N′Bis

The reaction of (R) or (S)-N⁴,N⁵-bis(t-butoxycarbonyl)-4,5-diaminopentanoic acid (6) with (R) or (S)-N³,N⁴-bis(t-butoxycarbonyl)-3,4-diaminobutylisocyanate (8) catalyzed by 4-dimethylamino pyridine (DMAP), leads to the synthesis of (R,R), (S,S), (R,S) and (S,R) isomeric amides (11 a — d) The addition of adipic acid monomethyl ester to (R) or (S) isocyanate, followed by saponification, acidification and subsequent reaction with the second molecule of (R) or (S) isocyanate allows isolation of the (R,R), (S.S) and the meso isomers of N,N′-bis[3,4-bis(t-butoxycarbonylamino) butyl]hexanediamide (17) Removal of protecting groups with HCl/EtOH affords chiral non-racemic molecules having two free vicinal diamine units.     

Oligomeric flavanoids. Part 13. Synthesis of profisetinidins based on (−) robinetinidol and (+) -epifisetinidol

Acid-catalyzed condensation of (+)-mollisacacidin-[(2R, 3S, 4R)-2, 3-trans-3, 4-trans-flavan-3,3′,4,4′,7-pentaol] with an excess of (−)-robinetinidol[(2R,3S)-2,3-trans-flavan-3,3′,4′,5′,7-pentaol] afforded a novel series of bi-, tri-, and tetraflavanoid profisetinidins. They are accompanied by (−)-fisetinidol-(4,2′)-(−)-robinetinidol which results from the pyrogallol B-ring of (−)-robinetinidol serving as nucleophile competing with its resorcinol A-ring in coupling with a C-4 carbocationic intermediate. Similar condensation with (+)-epifisetinidol[(2S,3S)-2,3-cis-flavan-3,3′,4′,7-tetraol] led to the exclusive formation of [4,6]-interflavanyl bonds, these units being ‘linearly’ arranged in the tetraflavanoid analogue in contrast to the ‘branched’ nature of the (−)-robinetinidol homologue.     

Resolution of 1-substituted-3-methyl-3-phospholene 1-oxides by molecular complex formation with TADDOL derivatives

The antipodes of 1-aryl-, 1-alkyl- and 1-alkoxy-3-methyl-3-phospholene 1-oxides 1a–h and 1-phenyl-3-methyl-3-phospholene 1-sulfide 1i were separated in good yields and high enantiomeric excesses (up to >99% ee) by resolution via formation of diastereomeric complexes with either (−)-(4R,5R)-4,5-bis(diphenylhydroxymethyl)-2,2-dimethyldioxolane 2 (TADDOL) or (−)-(2R,3R)-,,′,′-tetraphenyl-1,4-dioxaspiro[4.5]decan-2,3-dimethanol 3. The stereostructure of the supramolecular formations and the absolute configurations of the 3-phospholene oxides 1a, 1e and 1f were elucidated by single crystal X-ray crystallography. CD spectroscopy was also useful in determining the absolute configurations of some phospholene oxides 1b, 1c, 1g and 1h.     

Synthesis, structure and nuclease activity of copper complexes of disubstituted 2,2′-bipyridine ligands bearing ammonium groups

A series of Cu(II) complexes of disubstituted 2,2′-bipyridine bearing ammonium groups [Cu(L¹⁻⁴)₂Br]⁵⁺ (1–4, L¹ = [5,5′-(Me₂NHCH₂)₂-bpy]²⁺, L² = [5,5′-(Me₃NCH₂)₂-bpy]²⁺, L³ = [4,4′-(Me₂NHCH₂)₂-bpy]²⁺, L⁴ = [4,4′-(Me₃NCH₂)₂-bpy]²⁺ and bpy = 2,2′-bipyridyl) were synthesized, of which complexes 1 and 4 were structurally characterized. Both coordination configurations of Cu(II) ions can be described as distorted trigonal bipyramid. The interaction between all complexes and CT-DNA was evaluated by thermal-denaturation experiments and CD spectroscopy. Results show that the complexes interact with CT-DNA via outside electrostatic interactions and their binding ability follows the order: 1 > 2 > 3 > 4. In the absence of any reducing agents, the cleavage of plasmid pBR322 DNA by these complexes was investigated and the hydrolysis kinetics of DNA was studied in Tris buffer (pH 7.5) at 37 °C. Obtained pseudo-Michaelis–Menten kinetic parameters: 15.0, 13.6, 2.01 and 1.69 h⁻¹ for 1, 2, 3 and 4, respectively, indicate that complexes 1 and 2 exhibit very high DNA cleavage activities. According to their crystal data, the high nuclease activity may be attributed to the strong interaction of the metal moiety and two ammonium groups with phosphate groups of DNA.     

Spectroscopic and theoretical investigations on effective and selective complexation between porphyrins and fullerenes

We have tailored some interesting mono- and diporphyrins, viz., 5, 10, 15, 20-tetrakis(octadecyloxyphenyl)-21H,23H-porphyrin (TP), 5, 15-bis(3, 5-dioctylphenyl)-2, 8, 12, 18-tetramethyl-3, 7, 13, 17-tetradodecyl-21H,23H-porphyrin (AP) and 1, 3-bis(10′,20′-diundecyl-21′H,23′H-porphyrin-5′-yl)benzene (DP) as host molecules to study their complexation behavior with C₆₀ and C₇₀. Fluorescence spectroscopic measurements showed that emission of TP, AP and DP in toluene was quenched in the presence of C₆₀ or C₇₀. Large binding constants (K) in the magnitude of 1.5 × 10⁴ dm³ mol⁻¹ have been obtained for the 1:1 complexes of C₇₀ with TP, AP and DP. However, the C₆₀ complexes have exhibited 8.5 times smaller K compared to C₇₀ complexes. Ab initio theoretical calculations give a good support in favor of strong complexation between C₇₀ and porphyrins.     

Syntheses of mixed ligands complexes of Ru(II) with 4,4′-dicarboxy-2,2′-bipyridine and substituted pteridinedione and the use of these complexes in electrochemical photovoltaic cells

The synthesis, spectral and photoelectrochemical studies of mixed ligand complexes of [Ru(dcbpy)₂(LL)]Cl₂, where LL=2,4-(1,3-N,N′-dimethyl)pteridinedione (DMP), 6,7-dimethyl-2,4-(1,3-N,N′-dimethyl)pteridinedione (MDMP), 6,7-diphenyl-2,4-(1,3-N,N′-dimethyl)pteridinedione (PhDMP), dibenzo[h,j]-(1,3-N,N′-dimethyl)isoalloxazine (BIAlo), 6,7-bis(pyrid-2-yl)-2,4-(1,3-N,N′-dimethyl) pteridinedione (PyDMP) were carried out. These complexes were attached to sol–gel processed TiO₂ electrodes and the photocells fabricated were illuminated with polychromatic radiation in the presence of I₂/I₃⁻ as redox electrolyte. The incident photon to current conversion efficiency determined was found to be 20–48%.     

X-ray crystal structure analysis and atomic charges of color former and developer: 2. Color formers

The crystal and molecular structures of 2′-amino-6′-dibutylamino-3′-methylspiro[isobenzofuran-1(3H), 9′[9H]xanthen]-3-one (1), 2′-amino-6′-(N-cyclohexyl-N-methylamino)-3′-methylspiro[isobenzofuran-1(3H), 9′[9H]xanthen]-3-one (2) and 2′-(2-chlorophenyl)amino-6′-dibutylaminospiro[isobenzofuran-1(3H), 9′[9H]xanthen-3-one (3) have been determined by single-crystal X-ray diffraction analysis. Atom-atom non-bonded potential energy and semiempirical quantum chemical calculations have been performed. The xanthene rings of 1 to 3 are slightly bent and the phthalide rings are planar. The phthalide ring moieties are almost perpendicular (88.9(1)−93.5(5)°) to the xanthene rings. The bond lengths C(6)---O(2) are apparently extended from the normal C(sp³)---O (lactone) length. The temperature factors for one butyl group C(32)---C(35)) of 1 increase gradually toward the terminal carbon. The temperature factors for C(30)---C(33) of 2 indicate large vibrations and these are reflected in short bond lengths. Two butyl groups of 3 are disordered and these C---C bond lengths are short and long alternately. Atomic net charges around spirocarbon C(6) and toward N(1) to C(6) indicate the weak alternative system in the colorless form. As the xanthene ring has a planar geometry, the π electron density migration will easily occur from the auxochromes attached to the phthalide ring to the xanthene ring.     

Tris-chelate complexes with chiral ligands: In search of diastereoisomeric selectivity with remote stereogenic centres

The chiral ligands, 4,4′-bis{(1S,2R,4S)-(−)-bornyloxy}-2,2′-bipyridine, (1S,2R,4S)-1, and 4,4′-bis{(1R,2S,4R)-(+)-bornyloxy}-2,2′-bipyridine, (1R,2S,4R)-1, have been prepared and characterized by spectroscopic techniques and, for (1S,2R,4S)-1, by single crystal X-ray diffraction. Despite the use of enantiomerically pure ligands, the formation of the complexes [Fe((1S,2R,4S)-1)₃]²⁺, [Ru((1S,2R,4S)-1)₃]²⁺, [Ru((1S,2R,4S)-1)(bpy)₂]²⁺ and [Ru((1R,2S,4R)-1)(bpy)₂]²⁺ proceeds without preference for either the Δ or Λ-diastereoisomers.     

Synthesis, crystal structure and third-order non-linear optical property of heterobimetallic cluster compound [MoOICu3S3(2,2′-bipy)2]

Nest-shaped cluster [MoOICu₃S₃(2,2′-bipy)₂] (1) was synthesized by the treatment of (NH₄)₂MoS₄, CuI, (n-Bu)₄NI, and 2,2′-bipyridine (2,2′-bipy) through a solid-state reaction. It crystallizes in monoclinic space group P2₁/n, a=9.591(2) Å, b=14.820(3) Å, c=17.951(4) Å, β=91.98(2)°, V=2549.9(10) ų, and Z=4. The nest-shaped cluster was obtained for the first time with a neutral skeleton containing 2,2′-bipy ligand. The non-linear optical (NLO) property of [MoOICu₃S₃(2,2′-bipy)₂] in DMF solution was measured by using a Z-scan technique with 15 ns and 532 nm laser pulses. The cluster has large third-order NLO absorption and the third-order NLO refraction, its ₂ and n₂ values were calculated as 6.2×10⁻¹⁰ and −3.8×10⁻¹⁷ m² W⁻¹ in a 3.7×10⁻⁴ M DMF solution.     

Synthesis of 1,1′-methylenedi[(1R,1′R,3R,3′R,5R,5′R)-8-oxabicyclo[3.2.1]oct-6-en-3-ol] and derivatives: precursors of long-chain polyketides

Racemic 1,1′-methylene[(1RS,1′RS,3RS,3′RS,5RS,5′RS)-8-oxabicyclo[3.2.1]oct-6-en-3-ol] ((±)-6) derived from 2,2′-methylenedifuran has been resolved kinetically with Candida cyclindracea lipase-catalysed transesterification giving 1,1′-methylenedi[(1R,1′R,3R,3′R,5R,5′R)-8-oxabicyclo[3.2.1]oct-6-en-3-ol] (−)-6 (30% yield, 98% ee) and 1,1′-methylenedi[(1S,1′S,3S,3′S,5S,5′S)-8-oxabicyclo[3.2.1]oct-6-en-3-yl] diacetate (+)-8, (40% yield, 98% ee). These compounds have been converted into 1,1′-methylenedi[(4S,4′S,6S,6′S)- and (4R,4′R,6R,6′R)-cyclohept-1-en-4,6-diyl] derivatives.     

Calorimetric comparison of the interactions between salivary proteins and Streptococcus mutans with and without antigen I/II

Antigen I/II can be found on streptococcal cell surfaces and is involved in their interaction with salivary proteins. In this paper, we determine the adsorption enthalpies of salivary proteins to Streptococcus mutans LT11 and S. mutans IB03987 with and without antigen I/II, respectively, using isothermal titration calorimetry. In addition, protein adsorption to the cell surfaces was determined spectrophotometrically. S. mutans LT11 with antigen I/II, yielded a much higher, exothermic adsorption enthalpy at pH 6.8 (ranging from −2073 × 10⁻⁹ to −31707 × 10⁻⁹ μJ per bacterium) when mixed with saliva than did S. mutans IB03987 (−165 × 10⁻⁹ to −1107 × 10⁻⁹ μJ per bacterium) at all bacterial concentrations studied (5 × 10⁹, 5 × 10⁸, and 5 × 10⁷ ml⁻¹), largest effects per bacterium being observed for the lowest concentration. However, the enthalpy of salivary protein adsorption to S. mutans LT11 became smaller at pH 5.8. Adsorption isotherms for the S. mutans LT11 showed considerable protein adsorption at pH 6.8 (1.2–2.1 mg/m²), that decreased only slightly at pH 5.8 (1.1–1.6 mg/m²), with the largest amount adsorbed at the lowest bacterial concentration. This suggests that the protein(s) in the saliva with the strongest affinity for antigen I/II is (are) readily depleted from saliva. In conclusion, antigen I/II surface proteins on S. mutans play a determinant role in adsorption of salivary proteins through the creation of enthalpically favorable adsorption sites.     

Structures of 3,3′-dicarbometoxy-2,2′-bipyridine complexes with silver(I) and copper(II) cations

The structures of 3,3′-dicarbometoxy-2,2′-bipyridine (dcmbpy) complexes with copper(II) and silver(I) cations have been determined using single crystal X-ray-diffraction. The crystals of Cu(dcmbpy)Cl₂ are monoclinic, C2/c, a = 16.966(3), b = 18.373(3), c = 13.154(2) Å, β = 126.543(3)°. The crystals of Ag(dcmbpy)NO₃ · H₂O are also monoclinic, C2/c, a = 16.7547(13), b = 11.0922(9), c = 18.7789(18) Å, β = 100.228(7)°. The results have been compared with the literature data on the complexes of dcmbpy and its precursors: 2,2′-bipyridine (bpy) and 3,3′-dicarboxy-2,2′-bipyridine (dcbpy). Two types of complexes of 3,3′-carboxy derivatives of bpy are distinguished: (1) with metal atom bonded to two N atoms of the same molecule and (2) with metal atom bonded to two N atoms of two different molecules. The Cu(dcmbpy)Cl₂ complex belongs to the first type, whereas Ag(dcmbpy)NO₃ · H₂O belongs to the second type.     

Synthesis, characterization and magnetic properties of novel μ-isophthalato oxovanadium(IV) binuclear complexes

Four novel oxovanadium(IV) binuclear complexes have been synthesized, namely [(VO)₂(IPHTA) (L)₂SO₄ (L denotes 2,2′-bipyridine (bpy); 1,10-phenanthroline (phen); 4,4′-dimethyl-2,2′-bipyridine (Me₂bpy) and 5-nitro-1,10-phenanthroline (NO₂-phen)), where IPHTA is the isophthalate dianon. Based on elemental analyses, molar conductivity measurements, IR and electronic spectra studies, it is proposed that these complexes have IPHTA-bridged structures and consist of two vanadium(IV) atoms in a square-pyramidal environment. The complexes [(VO)₂(IPHTA)(Me₂bpy)₂]SO₄ (1) and [(VO)₂(IPHTA)(bpy)₂]SO₄ (2) were characterized by variable temperature magnetic susceptibility (4–300 K) and the data could be well fitted by the least-squares method to a susceptibility equation derived from the spin Hamiltonian operator, . The exchange integral, J, was found to be −26.8 cm⁻¹ for (1) and −31.0 cm⁻¹ for (2). These results are commensurate with antifferomagnetic interactions between two oxovanadium(IV) ions within each molecule. The influence of different terminal ligands on magnetic interactions between the metals of this kind of complexes is also discussed.     

Synthesis of optically active forms of sulcatol : The aggregation pheromone in the scolytid beetle, Gnathotrichus sulcatus

(S)-(+)-Sulcatol (1) and its antipode (1′) were synthesized from (R)-(−)-glutamic acid (2), and its antipode (2′), respectively. This established the absolute configurations of both enantiomers of sulcatol and afforded key materials to study the relationship between pheromone activity and chirality.     

Far infrared spectra, conformational equilibria, vibrational assignments, ab initio calculations and structural parameters for 2-bromoethanol

The far infrared spectrum from 370 to 50 cm⁻¹ of gaseous 2-bromoethanol, BrCH₂CH₂OH, was recorded at a resolution of 0.10 cm⁻¹. The fundamental O–H torsion of the more stable gauche (Gg′) conformer, where the capital G refers to internal rotation around the C–C bond and the lower case g to the internal rotation around the C–O bond, was observed as a series of Q-branch transitions beginning at 340 cm⁻¹. The corresponding O–H torsional modes were observed for two of the other high energy conformers, Tg (285 cm⁻¹) and Tt (234 cm⁻¹). The heavy atom asymmetric torsion (rotation around C–C bond) for the Gg′ conformer has been observed at 140 cm⁻¹. Variable temperature (−63 to −100°C) studies of the infrared spectra (4000–400 cm⁻¹) of the sample dissolved in liquid xenon have been recorded. From these data the enthalpy differences have been determined to be 411±40 cm⁻¹ (4.92±0.48 kJ/mol) for the Gg′/Tt and 315±40 cm⁻¹ (3.76±0.48 kJ/mol) for the Gg′/Tg, with the Gg′ conformer the most stable form. Additionally, the infrared spectrum of the gas, and Raman spectrum of the liquid phase are reported. The structural parameters, conformational stabilities, barriers to internal rotation and fundamental frequencies have been obtained from ab initio calculations utilizing different basis sets at the restricted Hartree–Fock or with full electron correlation by the perturbation method to second order. The theoretical results are compared to the experimental results when appropriate. Combining the ab initio calculations with the microwave rotational constants, r₀ adjusted parameters have been obtained for the three 2-haloethanols (F, Cl and Br) for the Gg′ conformers.     

[Ir(3,4,7,8-Me4phen) (CH2=CH2)2Cl]: A very active catalyst precursor for hydrogen transfer from alcohols to unsaturated organic substrates

Some new complexes of the type Ir¹chel(CH₂=CH₂)₂Cl (chel = bipy; 4,4′-Me₂bipy; 4,4′-Ph₂bipy; phen; 5,6-Me₂phen; 4,7-Ph₂phen; 3,4,7,8-Me₄phen) behave as catalyst precursors for the hydrogen transfer from alcohols to ketones and Schiff bases. The most active of the complexes is the 3,4,7,8-Me₄phen derivative, which, at 83°C, gave turnovers of up to 2850 cycles/min with cyclohexanone, 2700 cycles/min with 4-tert-butylcyclohexanone and 5000 cycles/min with benzylidenaniline, at a catalyst concentration of 4 X 10⁻⁵ M and a KOH (cocatalyst) concentration of 8 X 10⁻⁴ M. Good catalytic activity was observed also at room temperature. Some catalytic activity was found at low substrate concentrations, even in the absence of KOH. The maximum stereoselectivity reached in the reduction of 4-tertbutylcyclohexanone was 97%, the trans-alcohol being formed.     

Dynamic behaviour and X-ray analysis of chiral η-allylpalladium complexes. II

The DANTE technique and NOESY two-dimensional method have been employed to observe the isomerization of the chiral cationic complex [Pd(η³-CH₂CMeCH₂(P-P′)]⁺ (1a), where P-P′ = the chiral chelating ligand (S)(N-diphenylphosphino)(2-diphenylphosphinoxymethyl)pyrrolidine. The rate constant was found to be 0.5 s⁻¹ in CHCl₃ at 295 K and 1.50 s⁻¹ in the presence of added free ligand. In the latter case the epimerization proceeds by a π-σ-π mechanism via the intermediacy of a primary η¹-allylpalladium complex. Although the intermediate was not detected, the NMR findings reveal that it has the allylic terminus η¹-bonded to palladium. The structure of 1a in its PF₆⁻ salt has been determined. The compound crystallizes in the orthorhombic space group P2₁2₁2₁ with a 10.029(4) b 19.203(8) c 36.115(6) Å, Z = 8, R = 0.0572 and R_w = 0.0712 for 3716 observed reflections with I > 3σ(I).     

Photophysics of ruthenium(II) complexes with 2-(2′-pyridyl) pyrimidine and 2,2′-bipyridine ligands in fluid solution

The photophysics of three complexes of the form Ru(bpy)₃₋(pypm)²⁺ (where bpy2,2′-bipyridine, pypm 2-(2′-pyridyl)pyrimidine and P=1, 2 or 3) was examined in H₂O, propylene carbonate, CH₃CN and 4:1 (v/v) C₂H₅OH---CH₃OH; comparison was made with the well-known photophysical behavior of Ru(bpy)₃²⁺. The lifetimes of the luminescent metal-to-ligand charge transfer (MLCT) excited states were determined as a function of temperature (between −103 and 90 °C, depending on the solvent), from which were extracted the rate constants for radiative and non-radiative decay and ΔE, the energy gap between the MLCT and metal-centered (MC) excited states. The results indicate that ^*Ru(bpy)₂(pypm)²⁺ decays via a higher lying MLCT state, whereas ^*Ru(pypm)₃²⁺ and ^*Ru(pypm)₂(bpy)²⁺ decay predominantly via the MC state.     

Conformational and structural analysis of N-N′-bis(4-methoxybenzylidene)ethylenediamine

The Schiff base compound, N-N′-bis(4-methoxybenzylidene)ethylenediamine (C₁₈H₂₀N₂O₂) has been synthesized and its crystal structure has been investigated by X-ray analysis and PM3 method. The compound crystallizes in monoclinic space group P2₁/n with a=10.190(1), b=7.954(1), c=10.636(1) Å, β=111.68(1)°, V=801.1(1) ų, Z=2 and D_cal=1.229 Mgm⁻³. The title structure was solved by direct methods and refined to R=0.056 for 2414 reflections [I>3.0σ(I)] by full-matrix anisotropic least-squares methods. The energy profile of the compound was calculated by PM3 method as a function of θ[N1′–C9′–C9–N1]. The most stable molecular structure of the title compound is the anti conformation, which is different in energy by 5.0 and 1.0 kcal mol⁻¹ from the eclipsed conformation I and gauche conformations, (III and V), respectively.     

Extraordinary chiral discrimination in inclusion gas chromatography. Thermodynamics of enantioselectivity between a racemic perfluorodiether and a modified γ-cyclodextrin

The enantiomers of the perfluorodiether “compound B” [2-(fluoromethoxy)-3-methoxy-1,1,1,3,3-pentafluoropropane], a decomposition product of the inhalational anesthetic sevoflurane [2-(fluoromethoxy)-1,1,1,3,3,3-hexafluoropropane], were separated by gas chromatography on octakis(3-O-butanoyl-2,6-di-O-n-pentyl)-γ-cyclodextrin (Lipodex E), dissolved in polysiloxane PS 255 (30% w/w), with an unexpectedly high separation factor of =10.6 at 26 °C. Using the concept of the retention increment R′, non-enantioselective and enantioselective contributions to retention were separated and thus reliable thermodynamic parameters of enantioselectivity, i.e. −Δ_S,R(ΔG)=5.7 (0.05) kJ/mol at 303 K, −Δ_S,R(ΔH)=20.1 (0.64) kJ/mol, Δ_S,R(ΔS)=−47.4 (2.0) J/K mol and T_isoenant=424 (30) K or 150 °C, were determined by temperature-dependent measurements. The enantiomeric bias represents the largest values ever measured in enantioselective gas chromatography. An equation is presented which allows calculation of the non-enantioselective contributions to retention from measurements at two arbitrary concentrations of Lipodex E in polysiloxane. Surprisingly, the enantioselectivity is greatly reduced when employing the β-cyclodextrin analogue and breaks down completely with the -cyclodextrin analogue of Lipodex E.