FT-far-infrared spectroscopic studies of solute-solvent interactions and molecular dynamics in solutions of methanol,N-methyl formamide and N,N-dimethyl formamide

Quantitative measurements of the optical constants (4–170 cm^–1) of three organic liquids and their dilute solutions in carbon tetrachloride have been interpreted in terms of molecular relaxation processes arising from solute-solute and solute-solvent interactions. The behaviour of CH₃OH and NMF on dilution is quite different from that of DMF, emphasizing the importance of hydrogen bonding potentials in the former two liquids.     

Density functional theory and post-Hartree-Fock studies on molecular structure and harmonic vibrational spectrum of formaldehyde

Density functional theory (DFT) with the Becke's three-parameter exchange correlation functional and the functional of Lee, Yang and Parr, gradient-corrected functionals of Perdew, and Perdew and Wang [the DFT(B3LYP), DFT(B3P86) and DFT(B3PW91) methods, respectively], and several levels of conventional ab initio post-Hartree-Fock theory (second- and fourth-order perturbation theory M?ller-Plesset MP2 and MP4(SDTQ), coupled cluster with the single and double excitations (CCSD), and CCSD with perturbative triple excitation [CCSD(T)], configuration interaction with the single and double excitations [CISD], and quadratic configuration interaction method [QCISD(T)], using several basis sets [ranging from a simple 6-31G(d,p) basis set to a 6-311+ +G(3df, 2pd) one], were applied to study of the molecular structure (geometrical parameters, rotational constants, dipole moment) and harmonized infrared (IR) spectrum of formaldehyde (CH₂O). High-level ab initio methods CCSD(T) and QCISD(T) with the 6-311+ +G(3df, 2pd) predict correctly molecular parameters, vibrational harmonic wavenumbers and the shifts of the harmonic IR spectrum of ¹²CH₂ ¹⁶O upon isotopic substitution. Received: 30 January 1997 / Accepted: 7 May 1997     

An assessment of density functional methods for studying molecular adsorption in cluster models of zeolites

The performance of six density functional theory (DFT) methods has been tested for a zeolite cluster containing three tetrahedral atoms (3T) and the complexes it forms with water and methanol molecules. The DFT methods (BLYP, BP86, BPW91, B3LYP, B3P86, B3PW91) give results in good agreement with second-order perturbation theory (MP2). The results in this paper provide evidence of the suitability of DFT methods for studying hydrogen-bonded adsorption complexes in zeolites. Generally, the hybrid DFT methods are in closer agreement with experiment and MP2 than the pure DFT methods for geometrical parameters. The only exception is the Z⁻ geometry, perhaps due to its anionic character. All DFT methods give results in good overall agreement with MP2 for intramolecular geometrical parameters of the adsorption complexes, intramolecular vibrational frequencies, and adsorption energies. The B3LYP method gives intermolecular geometries and intermolecular vibrational frequencies which are closest to those obtained from the MP2 method. Thus, the B3LYP method seems to be the best choice for a density functional treatment of molecular adsorption in zeolite systems.     

Density functional theory study of the interaction between formamide and uracil

The hydrogen bonding of complexes formed between the formamide and uracil molecule has been fully investigated in the present study using the density functional theory (DFT) method at varied basis set levels from 6‐31G to 6‐311++G(d,p). Eight stable cyclic structures with two hydrogen bonds involved in the interaction are found on the potential energy surface (PES). The four structures are seven‐membered rings; the others are eight‐membered rings. The eight‐membered ring is preferred over the seven‐membered one by analyzing the hydrogen bond lengths and the interaction energies. The infrared (IR) spectrum frequencies, IR intensities, and the vibrational frequency shifts are reported. © 2006 Wiley Periodicals, Inc. Int J Quantum Chem, 2007     

Determination of extremely localized molecular orbitals in the framework of density functional theory

Extremely localized molecular orbitals are rigorously localized on only a preselected set of atoms and do not have any tails outside the localization region. The importance of these orbitals lies in their ability to be transferred from one molecule to another one. A new algorithm to determine extremely localized molecular orbitals in the framework of the density functional theory method is presented. This could also be a valuable tool in the quantum mechanics/molecular mechanics methodology where localized molecular orbitals are used to describe covalent bonds across the frontier region. The present approach is used to build up the electron density of thymopentin, a polypeptide constituted by five residues, starting from extremely localized molecular orbitals determined on a set of model molecules. The results obtained confirm good transferability properties for these orbitals.Proceedings of the 11th International Congress of Quantum Chemistry satellite meeting in honor of Jean-Louis Rivail     

Density functional theory study of the photosensitization mechanisms of indigo

The triplet excited state properties and photosensitization mechanisms of indigo were investigated based on density functional theory calculations. The solvent effects on the photosensitization mechanisms of indigo have also been considered. The thermodynamic feasibility of the possible ¹O₂ and O₂·⁻-photogeneration pathways by triplet excited state indigo in different solvents was explored, in order to gain some deeper insights into the photosensitization characters of the dye.      

(CH2)2N和(CH3)2NH+的密度泛函理论计算

用密度泛函理论UB3LYP／6-31G（d,p）方法研究了二甲胺自由基（CH3）2N及其质子化离子（CH3）2NH 的构象和超精细结构．在由构象研究得到的两种自由基的最稳定结构上,用密度泛函的UB3LYP和UB3PW91方法及从头计算的UHF、UMP2（FULL）方法计算了α-质子、β-质子和N核上的超精细偶合常数A（Hα）、A（Hβ）和A（N）结果表明：两种自由基中甲基内旋转的位垒均很低,分别为0．46kJ·mol-1（（CH3）2NH ）和2．6kJ·mol-1（（CH3）2N）．UB3LYP／6-31G（d,p）和UB3PW91／6-31G（d,p）计算的A（Hα）、A（Hβ）和A（N）与ESR实验结果符合得很好,UMP2／6-31G（d,p）方法的计算值与实验值符合得也较好．     

CO在SnO2(110)面吸附特性的密度泛函研究

根据密度泛函理论, 采用广义密度近似和总体能量平面波赝势方法, 以6层Slab周期结构为模型, 计算了CO以4种不同方式在SnO2(110)表面的吸附, 研究了CO吸附对表面特性的影响. 计算结果表明, CO以C端向下在低配位Sn5C位置的顶位吸附为稳定的吸附方式, 该吸附对表面的驰豫现象有所改善. CO吸附并未明显改变表面电子态密度分布, 但造成了费米能1.06 eV的升高. 吸附后CO分子向表面转移了0.07个电子, 使表面电阻下降. 理论计算的结果支持了气体传感器气敏机理中的表面电导模型.     

Synthesis, crystal structure and density functional theoretical studies on phenyl-thiocarbamic acid-O-pyridin-4-ylmethyl ester

The title compound of phenyl-thiocarbamic acid-O-pyridin-4-ylmethyl ester has been synthesized and characterized by elemental analysis, IR, electronic spectroscopy and X-ray single crystal diffraction. Density functional theory (DFT) method calculations of the structure, atomic charge distributions and the thermodynamic properties at different temperatures have been performed. Calculated results show that DFT method at B3LYP/6-311G^** level can well reproduce the structure of the title compound. The predicted vibrational frequencies are compared with the experimental ones and they support each other on the whole. The atoms of sulfur, oxygen and the atom of nitrogen from pyridine ring all have bigger negative charges, which make the title compound become a multidentate organic ligand. The correlation equations of the thermodynamic properties of and with temperature are also obtained.     

ClO与ClO自由基反应机理及电子密度拓扑分析

利用密度泛函理论对ClO与ClO自由基反应机理进行了深入理论探讨,在B3LYP/6-311＋＋G（3df）水平上对该反应体系的反应物、中间体、过渡态及产物进行了几何构型优化,对反应通道进行了IRC(内禀反应坐标）路径解析,计算了沿各反应通道的能垒和离解能,并进行了零点能校正.从量子拓扑学的角度,对反应通道IRC途径上一些重要点进行了电子密度拓扑分析,讨论了反应过程中化学键的断裂、生成以及键的变化规律,找到了反应途径的能量过渡态和结构过渡态.     

MgF2表面结构稳定性及电子特性的密度泛函理论研究

用密度泛函理论(DFT)研究了MgF₂(010)、MgF₂(001)、MgF₂(011)及MgF₂(110)四种表面10种构型的稳定性和电子特性. 结果表明: 四种表面的邻近表面几层原子均出现了明显的驰豫现象, 终止于单层F原子的表面相对稳定; 进一步对比分析四种表面(终止于单层F原子的稳定构型)的表面能发现, 稳定性依次减弱排列为MgF₂(110)、MgF₂(011)、MgF₂(010)、MgF₂(001); 最稳定的MgF₂(110)表面的态密度显示在费米能级以下较多的成键电子处于低能级区, 同时由于表面的影响, 导致表面F原子电荷聚集显负电性, 促使表面活性增加.     

全氟化合物热力学性质的密度泛函理论研究

用密度泛函理论B3LYP方法,在6-31G基组水平上,对12个全氟化合物分子进行了全优化计算,得到其分子零点振动能EZPV、热能校正值Eth、恒容热容CVΦ、标准熵SΦ以及配分函数lgQ等热力学参数,并计算了这些分子的电性拓扑状态指数Em.通过最佳变量子集回归建立了电性拓扑状态指数与热力学参数之间的QSPR模型,模型的相关系数R2分别为1.000,1.000,1.000,0.999和1.000,采用逐一剔除法得到的交叉验证相关系数R2cv分别为0.999,1.000,1.000,0.999和1.000,利用建构的数学模型得到热力学性质的相对平均误差分别为0.43%,0.41%,0.46%,0.41%和0.71%.从方程可以看出,F原子取代基数量是影响全氟化合物分子热力学参数大小的主要因素,检验证明所建模型具有良好的稳定性和预测能力.     

Density functional theory and surface-enhanced Raman spectroscopy studies on endocrine-disrupting chemical,dimethyl phthalate

A method to monitor endocrine-disrupting chemical contamination phthalate esters (PAEs) by surface-enhanced Raman scattering (SERS) spectroscopy has been investigated. The molecular structure and assignment of the vibrations of dimethyl phthalate (DMP), forming short chains in PAEs, has been studied by density functional theory (DFT) calculations. The structure of DMP with the dihedral angles of 1C-6C-11C-13O and 4C-5C-18C-20O being 133.78° and −24.00°, respectively, has the lowest energy. Theoretical vibrational frequencies using B3LYP/6-31 + G(d) (after scaling) show excellent agreement with the experimental normal Raman spectrum. In the region 200–1800 cm⁻¹, SERS spectra of DMP were measured using ordered gold nanosubstrates. All except the weak signals in the normal Raman spectrum of DMP were successfully enhanced. These results demonstrate that SERS technology could be developed as a rapid method for screening of DMP.     

硝酸甲与硝酸乙酯的结构、振动频率和热力学性质的密度函数 理论(DFT)研究

用密度函数理论(DFT)的BLYP和B3LYP方法,取6-31G,6-31G^*,6-31G^*^*,6-311G,6-311G^*和6-311G^*^*六种基组,对硝酸甲酯和硝酸乙酯的几何构型和红外振动频率进行了计算研究.结果表明,B3LYP方法在采用极化基组(6-31G^*,6-31G^*^*,6-311G^*和6-311G^*^*)时计算得到的结果均较好,适用于硝酸酯类化合物的研究.而BLYP方法无论采用何种基组均不适用;运用校正后的B3LYP/6-31G^*频率(校正因子0.975)计算得到的热力学性质(C^o~p,H^o和S^o)与实验结果较吻合。     

O2, CO2, and H2O Chemisorption on UN(001) Surface: Density Functional Theory Study

We performed density functional theory calculations of O₂, CO₂, and H₂O chemisorption on the UN(001) surface using the generalized gradient approximation and PW91 exchange-correlation functional at non-spin polarized level with the periodic slab model. Chemisorp-tion energies vs. molecular distance from UN(001) surface were optimized for four sym-metrical chemisorption sites. The results showed that the bridge parallel, hollow parallel and bridge hydrogen-up adsorption sites were the most stable site for O₂, CO₂, and H₂O molecular with chemisorption energies of 14.48, 4.492, and 5.85 kJ/mol, respectively. From the point of adsorbent (the UN(001) surface), interaction of O₂ with the UN(001) surface was of the maximum magnitude, then CO₂ and H₂O, indicating that these interactions were associated with structures of the adsorbate. O2 chemisorption caused N atoms on the surface to migrate into the bulk, however CO₂ and H₂O had a moderate and negligible effect on the surface, respectively. Calculated electronic density of states demonstrated the electronic charge transfer between s, p orbital in chemisorption molecular and U6d, U5f orbital.     

A density functional theory study on boundary of “superreduced” transition metal carbonyl anions [M(CO)n] (M=Cr, n=5, 4, 3, z=2, 4, 6; M=Mn, n=5, 4, 3, z=1, 3, 5; M=Fe, n=4, 3, 2, z=2, 4, 6; M=Co, n=4, 3, 2, z=1, 3, 5)

A nonlocal density functional theory (DFT) method has been applied to the calculations on optimized geometry, Mulliken atomic net charges and interatomic Mulliken bond orders as well as total bonding energies (E) in the binary transition metal carbonyl anions with different reduced states [M(CO)_n]^z− (M=Cr, n=5, 4, 3, z=2, 4, 6; M=Mn, n=5, 4, 3, z=1, 3, 5; M=Fe, n=4, 3, 2, z=2, 4, 6; M=Co, n=4, 3, 2, z=1, 3, 5). For comparison of relative stability, a relative stabilization energy D is defined as D=E([M(CO)_n]^z− )-nE(CO). The calculated C-O distances are lengthened monotonously with the increase of the anionic charge, but the M-C distances are significantly lengthened only in the higher reduced states. The relative stabilization energy calculated is a considerable negative value in the lower reduced states, but a larger positive value in the higher reduced states. The DFT calculations show that with the increase of the anionic charge, the Mulliken net charges on the M, C, and O atoms all increase, however, an excess of the anionic charge is mainly located at the central metal atom. The calculated C-O Mulliken bond orders decrease consistently with the increase of the anionic charge, but the M-C bond orders exhibit an irregular behavior. However, the total bond orders calculated clearly explain the higher reduced states to be considerably unstable. From analysis of the calculated results, it is deduced that the stability of the binary transition metal carbonyl anions [M(CO)_n]^z− studied are associated with the coordination number n and the anionic charge z, further, it is possible for the anions studied to be stable if n≥z, conversely, it is impossible when n<z.     

Preparation, characterization, and the molecular structure of 2,4,6-trinitro-mesitylene

We reported in this study the synthesis, culture of crystal, and single-crystal X-ray crystallography of the 2,4,6-trinitro-trimethylbenzene (TNTM) compound. We found the crystal belongs to the Triclinic system with space group P-1. The compound was also characterized by FT-IR,¹H NMR, and MS spectroscopy techniques. Density functional theory (DFT) B3LYP was employed to optimize structure and calculate frequencies of TNTM. The calculated geometrical parameters are close to the corresponding experimental ones. The thermal decomposition of TNTM was investigated by DSC and TG–DTG methods at heating rate 10°C/min. The results indicate that TNTM has high heat-resistant ability.1

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硝基烃光异构化反应的密度泛函理论计算

采用DFT(B3LYP)计算方法, 在6-31G*水平上获得了反式-β-硝基苯乙烯、硝基乙烯和硝基甲烷基态异构化反应时的过渡态分子结构, 并计算了异构化能垒及激发态电子跃迁能. 结果显示, 反式-β-硝基苯乙烯和硝基苯与硝基甲烷相比具有较短的过渡态C—N键长, 较低的异构化能垒, 并且随着不饱和度的增加, 硝基苯和反式-β-硝基苯乙烯电子垂直跃迁能与基态异构化反应过渡态之间能量的差值ΔE迅速减小. 从能量的角度分析, 取代基的不饱和度越大, 越有利于激发态势能面与异构化反应势能面发生锥型或漏斗交叉, 因而越有利于光化学反应沿光异构化通道进行. 激发态分子的初始电子运动的定域或离域特征的差别可能是导致硝基苯等硝基芳烃与硝基甲烷等硝基烷烃光解通道不同的一个重要原因.