A microwave and quantum chemical study of the conformational properties and intramolecular hydrogen bonding of 1-fluorocyclopropanecarboxylic acid

The structural and conformational properties of 1-fluorocyclopropanecarboxylic acid have been explored by microwave spectroscopy and a series of ab initio (MP2/6-311++G(d,p) level), density functional theory (B3LYP/aug-cc-pVTZ level), and G3 quantum chemical calculations. Four "stable" conformers, denoted conformers I-IV, were found in the quantum chemical calculations, three of which (conformers I -III) were predicted to be low-energy forms. Conformer I was in all the quantum chemical calculations predicted to have the lowest energy, conformer III to have the second lowest energy, and conformer II to have the third lowest energy. Conformers II and III were calculated to have relatively large dipole moments, while conformer I was predicted to have a small dipole moment. The microwave spectrum was investigated in the 18-62 GHz spectral range. The microwave spectra of conformers II and III were assigned. Conformer I was not assigned presumably because its dipole moment is comparatively small. Conformer II is stabilized by an intramolecular hydrogen bond formed between the fluorine atom and the hydrogen atom of the carboxylic acid group. Conformer III has a synperiplanar orientation for the F-C-C=O and H-O-C=O chains of atoms. Its dipole moment is: mua = 3.4(10), mub = 10.1(13), and muc = 0.0 (assumed) and mu(tot) = 10.6(14) x 10(-30) C m [3.2(4) D]. Several vibrationally excited states of the lowest torsional mode of each of II and III were also assigned. The hydrogen-bonded conformer II was found to be 2.7(2) kJ/mol less stable than III by relative intensity measurements. Absolute intensity measurements were used to show that the unassigned conformer I is the most abundant form present at a concentration of roughly 65% at room temperature. Conformer I was estimated to be ca. 5.0 kJ/mol more stable than the hydrogen-bonded rotamer (conformer II) and ca. 2.3 kJ/mol more stable than conformer III. The best agreement with the theoretical calculations is found in the MP2 calculations, which predict conformer I to be 5.1 kJ/mol more stable than III and 1.7 kJ/mol more stable than II.     

Microwave spectrum and conformational composition of 2-fluoroethylisocyanide

The microwave spectrum of 2-fluoroethylisocyanide, FCH(2)CH(2)N≡C, has been investigated in the whole 50-120 GHz spectral region. Selected portions of the spectrum in the range of 18-50 GHz have also been recorded. The microwave spectra of the ground state and vibrationally excited states of two conformers have been assigned. Accurate spectroscopic constants have been derived from a large number of microwave transitions. The F-C-C-N chain of atoms is antiperiplanar in one of these rotamers and synclinal in the second conformer. The energy difference between the two forms was obtained from relative intensity measurements. It was found that the synclinal conformer is favored over the antiperiplanar form by 0.7(5) kJ/mol. Quantum chemical calculations at the high CCSD/cc-pVTZ and B3LYP/cc-pVTZ levels of theory were performed. Most, but not all, of the spectroscopic constants predicted in these calculations are in good agreement with the experimental counterparts. The theoretical calculations correctly indicate that the F-C-C-N dihedral angle in the synclinal form is about 67° but underestimate the magnitude of the gauche effect and erroneously predict the antiperiplanar rotamer to be 1.3-1.6 kJ/mol more stable than the synclinal conformer.     

Microwave spectrum and conformational composition of 3-fluoropropionitrile (FCH2CH2CN)

The microwave spectrum of 3-fluoropropionitrile, FCH(2)CH(2)C≡N, has been investigated in the whole 17-75 GHz spectral region. Selected portions of the spectrum in the 75-95 GHz have also been recorded. The microwave spectra of the ground state as well as of three vibrationally excited states of each of two conformers have been assigned. The spectra of the vibrationally excited states belong to the lowest torsional and bending vibrations. The F-C-C-C chain of atoms is exactly antiperiplanar in one of these rotamers and synclinal in the second conformer. The F-C-C-C dihedral angle is 65(2)° in the synclinal form. The energy difference between the two forms has been obtained from relative intensity measurements performed on microwave transitions. It was found that the antiperiplanar conformer is more stable than the synclinal form by 1.4(5) kJ/mol. It is argued that the gauche effect is a significant force in this compound. Quantum chemical calculations at the high CCSD(full)/cc-pVTZ, MP2(full)/cc-pVTZ, and B3LYP/cc-pVTZ levels of theory have been performed. Most, but not all, of the theoretical predictions are in good agreement with experiment.     

Microwave spectrum and conformational composition of 2-chloroethylisocyanide

2-Chloroethylisocyanide (ClCH(2)CH(2)N≡C) has been synthesized, and its microwave spectrum has been investigated in the 20-97 GHz spectral region. The spectra of (35)Cl and (37)Cl isotopologues of two conformers have been assigned. The Cl-C-C-N chain of atoms is antiperiplanar in one of these rotamers and synclinal in the second. The energy difference between the two forms has been obtained from relative intensity measurements. It was found that the antiperiplanar conformer is favored over the synclinal form by 4.3(8) kJ/mol. Quantum chemical calculations at the CCSD/cc-pVTZ and B3LYP/cc-pVTZ levels of theory have been performed. Most, but not all, of the spectroscopic constants predicted in these calculations are in good agreement with their experimental counterparts. The theoretical calculations correctly predict that the 2-chloroethylisocyanide exists as a mixture of an antiperiplanar and a synclinal conformer, with the former about 3.5 kJ/mol more stable than the latter. Both methods of calculations find that the antiperiplanar rotamer has a symmetry plane. The dihedral angle formed by the Cl-C-C-N link of atoms of the synclinal form is 67° according to the CCSD calculations. It is estimated from a comparison with the experimental rotational constants that this dihedral angle is uncertain by ±3°.     

Conformational composition of cyclopentadienylphosphine investigated by microwave spectroscopy and quantum chemical calculations

The properties of cyclopentadienylphosphine have been investigated by means of Stark-modulation microwave spectroscopy and quantum chemical calculations at the MP2/aug-cc-pVTZ, B3LYP/6-311++G(d,p), and G3 levels of theory. Spectra attributable to two rotamers denoted conformers I and II have been assigned. Conformer I has a symmetry plane (Cs symmetry) consisting of the bisectors of the cyclopentadiene ring and of the phosphino group with the lone electron pair of phosphorus pointing toward the carbon ring. In conformer II, the phosphino group is rotated approximately 120 degrees out of this plane. Relative intensity measurements have been made, and it was found that conformer II is more stable than I by 1.3(4) kJ/mol. The preferred conformer represents a borderline case of intramolecular hydrogen bond stabilization. The experimental and MP2/ aug-cc-pVTZ rotational constants differ by several percent, which indicates that the aug-cc-pVTZ basis set is not large enough to be able to predict an accurate structure for the two conformers that are close to the equilibrium geometries. 5-Substituted 1,3-cyclopentadienyl derivatives may undergo circumambulatory rearrangements. However, there is no manifestation of this effect in the microwave spectrum of cyclopentadienylphosphine.     

A theoretical investigation of the low energy conformers of the isomers glycine and methylcarbamic acid and their role in the interstellar medium

We have theoretically investigated the low energy conformers of neutral glycine (NH(2)CH(2)COOH) and its isomer methylcarbamic acid (CH(3)NHCOOH) in the gas phase. A total of 16 different levels of the theory, including CCSD(T), MP2 and B3LYP methods with various Pople and Dunning type basis sets with and without polarization and diffuse functions were used. We found eight low energy glycine conformers, where the heavy atoms in three have a planar backbone, and four low energy methylcarbamic acid conformers all with non-planar backbones. Interestingly at all levels of theory, we found that the most stable methylcarbamic acid conformer is significantly lower in energy than the lowest energy glycine conformer. The MP2 level and single point CCSD(T) calculations show the lowest energy methylcarbamic acid conformer to be between 31 to 37 kJ mol(-1) lower in energy than the lowest energy glycine conformer. These calculations suggest that methylcarbamic acid might serve as a precursor to glycine formation in the Interstellar Medium (ISM). We also report the theoretical harmonic vibrational frequencies, infrared intensities, moment of inertia, rotational constants and dipole moments for all of the conformers. In order to understand how glycine or methylcarbamic acid might be formed in the ISM, larger calculations which model glycine or its isomer interacting with several surrounding molecules, such as water, are needed. We demonstrate that B3LYP method should provide a reliable and computationally practical approach to modeling these larger systems.     

吡啶-BH~3相互作用复合物的理论研究

对吡啶-BH~3复合物分别用MP2/6-31+G^*和B3LYP/6-31+G^*进行理论计算以预测该复合物的构型及解离能，得到四种构型，在MP2优化构型基础上作CCSD/6-31+G^*单点能量计算以验证MP2与B3LYP结果的可靠性，然后用B3LYP作振动频率分析，计算了各构型的垂直电离势，最后用更大基组作单点能量计算和自然键轨道(NBO)分析。结果表明，N-B直接相连的构型最稳定，其解离能为141.50kJ/mol,MP2和B3LYP对N-H接近的构型结果相关较大，另外两种构型稳定性介于二者之间，解离能分别为15.18kJ/mol,14.06kJ/mol(MP2/6-31+G^*)。     

A microwave spectroscopic and quantum chemical study of 3-butyne-1-selenol (HSeCH2CH2C[triple bond]CH)

The microwave spectrum of 3-butyne-1-selenol has been studied by means of Stark-modulation microwave spectroscopy and quantum chemical calculations employing the B3LYP/aug-cc-pVTZ and MP2/6-311++G(3df,3pd) methods. Rotational transitions attributable to the H80SeCH2CH2C[triple bond]CH and H78SeCH2CH2C[triple bond]CH isotopologues of two conformers of this molecule were assigned. One of these conformers possesses an antiperiplanar arrangement for the atoms Se-C-C-C, while the other is synclinal and seems to be stabilized by the formation of a weak intramolecular hydrogen bond between the hydrogen atom of the selenol group and the pi electrons of the CC triple bond. The energy difference between these conformers was determined to be 0.2(5) kJ/mol by relative intensity measurements, and the hydrogen-bonded form was slightly lower in energy.     

Microwave spectrum of 3-butyne-1-thiol: evidence for intramolecular S-H...pi hydrogen bonding

The microwave spectrum of 3-butyne-1-thiol has been studied by means of Stark-modulation microwave spectroscopy and quantum-chemical calculations employing the B3LYP/6-311++G(3df,2pd), MP2/aug-cc-pVTZ, MP2/6-311++G(3df,2pd), and G3 methods. Rotational transitions attributable to two conformers of this molecule were assigned. One of these conformers possesses an antiperiplanar arrangement of the atoms S-C1-C2-C3, while the other is synclinal and stabilized by the formation of an intramolecular hydrogen bond between the H-atom of the thiol group and the pi-electrons of the C[triple bond]C triple bond. The energy difference between these conformers was estimated to be 1.7(4) kJ mol(-1) by relative intensity measurements, with the hydrogen-bonded conformer being lower in energy. The spectra of five vibrationally excited states of the synclinal conformer were observed, and an assignment of these states to particular vibrational modes was made with the aid of a density functional theory (DFT) calculation of the vibrational frequencies at the B3LYP/6-311++G(3df,2pd) level of theory.     

Matrix isolation and low temperature solid state FTIR spectroscopic study of alpha-furil

Alpha-furil [C(4)H(3)O-C(=O)-C(=O)-C(4)H(3)O] has been isolated in argon and xenon matrices and studied by FTIR spectroscopy, supported by DFT(B3LYP)/6-311++G(d,p) calculations. The obtained spectra were fully assigned and revealed the presence in the matrices of three different conformers, all of them exhibiting skewed conformations around the intercarbonyl bond with the two C(4)H(3)O-C(=O) fragments nearly planar. The three conformers differ in the orientation of the furan rings relative to the carbonyl groups: the most stable conformer, I (C(2) symmetry; O=C-C=O intercarbonyl dihedral equal to 153.1 degrees), has both furan rings orientated in such a way that one of their beta-hydrogen atoms approaches the oxygen atom of the most distant carbonyl group, forming two H-C=C-C-C=O six-membered rings; the second most stable conformer, II (C(1) symmetry; O=C-C=O intercarbonyl dihedral equal to 126.9 degrees ), has one furan ring orientated as in I, while the second furan group is rotated by ca. 180 degrees (resulting in an energetically less favourable H-C=C-C=O five-membered ring); in the third conformer, III (C(2) symmetry; O=C-C=O dihedral equal to 106.2 degrees ), both furan rings assume the latter orientation relative to the dicarbonyl group. The theoretical calculations predicted the two higher energy forms being 5.85 and 6.22 kJ mol(-1) higher in energy than the most stable form, respectively, and energy barriers for conformational interconversion higher than 40 kJ mol(-1). These barriers are high enough to prevent observation of conformational isomerization for the matrix isolated compound. The three possible conformers of alpha-furil were also found to be present in CCl(4) solution, as well as in a low temperature neat amorphous phase of the compound prepared from fast condensation of its vapour onto a suitable 10 K cooled substrate. On the other hand, in agreement with the available X-ray data [S. C. Biswas, S. Ray and A. Podder, Chem. Phys. Lett., 1987, 134, 541], the IR spectra obtained for the neat low temperature crystalline state reveals that, in this phase, alpha-furil exists uniquely in its most stable conformational state, I.     

Microwave spectrum and conformational composition of 1-vinylimidazole

The microwave spectrum of 1-vinylimidazole has been investigated in the 21-80 GHz spectral region. The spectra of two conformers have been assigned. One of these forms is planar, while the other is nonplanar with the imidazole ring and the vinyl group forming an angle of 15(4)° from coplanarity. The planar form is found to be 5.7(7) kJ/mol more stable than the nonplanar rotamer by relative intensity measurements. The spectra of 10 vibrationally excited states of the planar form and one excited-state spectrum of the nonplanar form were assigned. The vibrational frequencies of several of these states were determined by relative intensity measurements. The microwave work has been augmented by quantum chemical calculations at the CCSD/cc-pVTZ, MP2/cc-pVTZ, and B3LYP/cc-pVTZ levels of theory. The B3LYP calculations predict erroneously that both forms of 1-vinylimidazole are planar, whereas the MP2 and CCSD calculations correctly predict the existence of a planar and a nonplanar conformer of this compound.     

Conformers and intramolecular hydrogen bonding of the oxalic acid monomer and its anions

Density functional theory, B3LYP/6‐31G** and B3LYP/6‐311+G(2d,p), and ab initio MP2/6‐31G** calculations have been carried out to investigate the conformers, transition states, and energy barriers of the conformational processes of oxalic acid and its anions. QCISD/6‐31G** geometrical optimization is also performed in the stable forms. Its calculated energy differences between the two most stable conformers are very near to the related observed value at 7.0 kJ/mol. It is found that the structures and relative energies of oxalic acid conformers predicted by these methods show similar results, and that the conformer L1 (C_2h) with the double‐interfunctional‐groups hydrogen bonds is the most stable conformer. The magnitude of hydrogen bond energies depends on the energy differences of various optimized structures. The hydrogen bond energies will be about 32 kJ/mol for interfunctional groups, 17 kJ/mol for weak interfunctional groups, 24 kJ/mol for intra‐COOH in (COOH)₂, and 60 kJ/mol for interfunctional groups in (COOH)COO⁻¹ ion if calculated using the B3LYP/6‐311+G(2d,p) method. © 2000 John Wiley & Sons, Inc. Int J Quant Chem 76: 541–551, 2000     

Conformers of gaseous proline

Accurate geometries, relative energies, rotational and quartic centrifugal distortion constants, dipole moments, harmonic vibrational frequencies, and infrared intensities were determined from ab initio electronic structure calculations for eighteen conformers of the neutral form of the amino acid L-proline. Only four conformers have notable population at low and moderate temperature. The second most stable conformer is only 2+/-2 kJ mol(-1) above the global minimum, while the third and fourth conformers are nearly degenerate and have an excess energy of 7+/-2 kJ mol(-1) relative to the global minimum. All four conformers have one hydrogen bond: N.HO in the lower energy pair of conformers, and NH.O in the higher energy pair of conformers. The conformer pairs differ only in their ring puckering. The relative energies of the conformers include corrections for valence electron correlation, extrapolated to the complete basis set limit, as well as core correlation and relativistic effects. Structural features of the pyrrolidine ring of proline are discussed by using the concept of pseudorotation. The accurate rotational and quartic centrifugal distortion constants as well as the vibrational frequencies and infrared intensities should aid identification and characterization of the conformers of L-proline by rotational and vibrational spectroscopy, respectively. Bonding features of L-proline, especially intramolecular hydrogen bonds, were investigated by the atoms-in-molecules (AIM) technique.     

Intramolecular hydrogen bonding controls 1,3-N,S- vs. 1,5-S,S'-coordination in Ni(II) complexes of N-thiophosphorylated thioureas RNHC(S)NHP(S)(OiPr)2

Reaction of the deprotonated N-thiophosphorylated thioureas RNHC(S)NHP(S)(OiPr)(2) (R = Ph, HL(I); 2-MeC(6)H(4)-, HL(II); 2,6-Me(2)C(6)H(3)-, HL(III); 2,4,6-Me(3)C(6)H(2)-, HL(IV); Me-, HL(V)) with Ni(II) leads to complexes of the formula [NiL(I-V)(2)]. The molecular structures of the thioureas HL(II-V) and the complexes [NiL(II-V)(2)] in the solid were elucidated by single-crystal X-ray diffraction analysis. In the complexes, the metal is found to be in a square planar trans-N(2)S(2) ([NiL(II-IV)(2)]) environment formed by the C=S sulfur atoms and the P-N nitrogen atoms, or in a square planar trans-S(2)S'(2) ([NiL(V)(2)]) environment formed by the C=S and P=S sulfur atoms of two deprotonated ligands. DFT calculations confirmed that the [Ni(L(II-IV)-N,S)(2)] isomers are more stable (by 16-21 kcal mol(-1)) than the corresponding [Ni(L(II-IV)-S,S')(2)] conformers. The main reason for higher stability of the 1,3-N,S vs. 1,5-S,S' isomers is the formation of intramolecular N-H···S=P hydrogen bonds. In solution the complexes [Ni(L(II-V)-N,S)(2)] have an exclusive 1,3-N,S coordination, while the compound [Ni(L(I)-N,S)(2)] exhibits two isomers in the (1)H and (31)P NMR spectra. The major species is assigned to the 1,3-N,S coordinated isomer, while the minor (～25%) signals are due to the 1,5-S,S' isomer. UV-Vis spectroscopic results are in line with this. The electrochemical measurements reveal reversible one-electron reduction and irreversible oxidations, both assigned to ligand-centred processes.     

Conformational stability from variable temperature FT-IR spectra of krypton solutions, r0 structural parameters, vibrational assignment, and ab initio calculations of 4-fluoro-1-butene

Variable temperature (-115 to -155 degrees C) studies of the infrared spectra (3200-400 cm-1) of 4-fluoro-1-butene, CH2=CHCH2CH2F, dissolved in liquid krypton have been carried out. The infrared spectra of the gas and solid as well as the Raman spectra of the gas, liquid, and solid have also been recorded from 3200 to 100 cm-1. From these data, an enthalpy difference of 72 +/- 5 cm-1 (0.86 +/- 0.06 kJ x mol-1) has been determined between the most stable skew-gauche II conformer (the first designation refers to the position of the CH2F group relative to the double bond, and the second designation refers to the relative positions of the fluorine atom to the C-C(=C) bond) and the second most stable skew-trans form. The third most stable conformer is the skew-gauche I with an enthalpy difference of 100 +/- 7 cm-1 (1.20 +/- 0.08 kJ x mol-1) to the most stable form. Larger enthalpy values of 251 +/- 12 cm-1 (3.00 +/- 0.14 kJ x mol-1) and 268 +/- 17 cm-1 (3.21 +/- 0.20 kJ x mol-1) were obtained for the cis-trans and cis-gauche conformers, respectively. From these data and the relative statistical weights of one for the cis-trans conformer and two for all other forms, the following conformer percentages are calculated at 298 K: 36.4 +/- 0.9% skew-gauche II, 25.7 +/- 0.1% skew-trans, 22.5 +/- 0.2% skew-gauche I, 10.0 +/- 0.6% cis-gauche, and 5.4 +/- 0.2% cis-trans. The potential surface describing the conformational interchange has been analyzed and the corresponding two-dimensional Fourier coefficients were obtained. Nearly complete vibrational assignments for the three most stable conformers are proposed and some fundamentals for the cis-trans and the cis-gauche conformers have been identified. The structural parameters, dipole moments, conformational stability, vibrational frequencies, infrared, and Raman intensities have been predicted from ab initio calculations and compared to the experimental values when applicable. The adjusted r0 structural parameters have been determined by combining the ab initio predicted parameters with previously reported rotational constants from the microwave data. These experimental and theoretical results are compared to the corresponding quantities of some similar molecules.     

Spectra and structure of silicon containing compounds. XXXIX. Raman and infrared spectra,conformational stability,vibrational assignment and ab initio calculations of n-propyltrifluorosilane

The infrared (3100-40 cm(-1)) spectra of gaseous and solid and Raman (3200-20 cm(-1)) spectra of liquid with qualitative depolarization values and solid n-propyltrifluorosilane, CH(3)CH(2)CH(2)SiF(3), have been recorded. Additionally the infrared spectra of the sample in nitrogen and argon matrices have been recorded. Both the anti and gauche conformers have been identified in the fluid phases but only the anti conformer remains in the solid. Variable temperature (-105 to -150 degrees C) studies of the infrared spectra of the sample dissolved in liquid krypton have been recorded and the enthalpy difference has been determined to be 135+/-14 cm(-1) (1.62+/-0.17 kJ mol(-1)) with the anti conformer the more stable form. At ambient temperature it is estimated that there is 51+/-2% of the gauche conformer present. Also the enthalpy difference in the liquid was obtained from variable temperature studies of the Raman spectra and from three conformer pairs an average value of 179+/-18 cm(-1) (2.14+/-0.22 kJ mol(-1)) was obtained again with the anti form the more stable conformer. Relatively complete vibrational assignments are proposed for both conformers based on the relative infrared and Raman spectral intensities, infrared band contours, depolarization ratios which are supported by normal coordinate calculations. The geometrical parameters, harmonic force constants, vibrational frequencies, infrared intensities, Raman activities, depolarization ratios, and energy differences have been obtained for the anti and gauche conformers from ab initio MP2/6-31G(d) calculations. Structural parameters and energy differences have also been obtained utilizing the larger 6-311+G(d, p) and 6-311+G(2d, 2p) basis sets. By utilizing the previously reported microwave rotational constants for five isotopomers of CH(3)SiF(3) along with ab initio predicted structural values, r(0) parameters have been obtained for methyltrifluorosilane. Similarly, from the ab initio predicted parameters "adjusted r(0)" parameters have been estimated for both conformers of n-propyltrifluorosilane. The results are discussed and compared with those obtained for some similar molecules.     

Photochemistry and vibrational spectra of matrix-isolated methyl 4-chloro-5-phenylisoxazole-3-carboxylate

Methyl 4-chloro-5-phenylisoxazole-3-carboxylate (MCPIC) has been synthesized, isolated in low temperature argon and xenon matrices, and studied by FTIR spectroscopy. The characterization of the low energy conformers of MCPIC was made by undertaking a systematic investigation of the DFT(B3LYP)/6-311++G(d,p) potential energy surface of the molecule. The theoretical calculations predicted the existence of three low energy conformers. Two of them (I and II) were observed experimentally in the cryogenic matrices. The third one (III) was found to be converted into conformer II during deposition of the matrices, a result that is in agreement with the predicted low III → II energy barrier (<0.3 kJ mol(-1)). In situ UV irradiation (λ > 235 nm) of matrix-isolated MCPIC yielded as final photoproduct the corresponding oxazole (methyl 4-chloro-5-phenyl-1,3-oxazole-2-carboxylate). Identification of the azirine and nitrile-ylide intermediates in the spectra of the irradiated matrices confirmed their mechanistic relevance in the isoxazole → oxazole photoisomerization.     

Structure of the boronic acid dimer and the relative stabilities of its conformers

Despite the widespread use of boronic acids in materials science and as pharmaceutical agents, many aspects of their structure and reactivity are not well understood. In this research the boronic acid dimer, [HB(OH)(2)](2), was studied by second-order M?ller-Plesset (MP2) perturbation theory and coupled cluster methodology with single and double excitations (CCSD). Pople split-valence 6-31+G*, 6-311G**, and 6-311++G** and Dunning-Woon correlation-consistent cc-pVDZ, aug-cc-pVDZ, cc-pVTZ, and aug-cc-pVTZ basis sets were employed for the calculations. A doubly hydrogen-bonded conformer (1) of the dimer was consistently found to be lowest in energy; the structure of 1 was planar (C(2h)) at most computational levels employed but was significantly nonplanar (C(2)) at the MP2/6-311++G** and CCSD/6-311++G** levels, the result of an intrinsic problem with Pople-type sp-diffuse basis functions on heavy atoms. The dimerization energy, enthalpy, and free energy for the formation of (1) from the exo-endo conformer of the monomer were -10.8, -9.2, and +1.2 kcal/mol, respectively, at the MP2/aug-cc-pVTZ level. Several other hydrogen-bonded conformers of the dimer were local minima on the potential energy surface (PES) and ranged from 2 to 5 kcal/mol higher in energy than 1. Nine doubly OH-bridged conformers, in which the boron atoms were tetracoordinated, were also local minima on the PES, but they were all greater than 13 kcal/mol higher in energy than 1; doubly H-bridged structures proved to be transition states. MP2 and CCSD results were compared to those from the BLYP, B3LYP, OLYP, O3LYP, PBE1PBE, and TPSS functionals with the 6-311++G** and aug-cc-pVTZ basis sets; the PBE1PBE functional performed best relative to the MP2 and CCSD results. Self-consistent reaction field (SCRF) calculations predict that boronic acid dimerization is less favorable in solution than in vacuo.     

Theoretical study of mechanism of forming a silapolycyclic compound between methylenesilylene and acetone

The mechanism of the cycloaddition reaction of forming a silapolycyclic compound between singlet methylenesilylene and acetone has been investigated with MP2/6‐31G* method, including geometry optimization and vibrational analysis for the involved stationary points on the potential energy surface. The energies of the different conformations are calculated by CCSD(T)//MP2/6‐31G* method. From the potential energy profile, we predict that the cycloaddition reaction of forming a silapolycyclic compound between singlet methylenesilylene and acetone has two competitive dominant reaction pathways. First dominant reaction pathway consists of four steps: (I) the two reactants (R1, R2) first form an intermediate (INT1) through a barrier‐free exothermic reaction of 46.2 kJ/mol; (II) intermediate (INT1) then isomerizes to a planar four‐membered ring product (P3) via transition state (TS3) with an energy barrier of 47.1 kJ/mol; (III) planar four‐membered ring product (P3) further reacts with acetone (R2) to form an intermediate (INT4), which is also a barrier‐free exothermic reaction of 40.0 kJ/mol; (IV) intermediate (INT4) isomerizes to a silapolycyclic compound (P4) via transition state (TS4) with an energy barrier of 57.0 kJ/mol. Second dominant reaction pathway consists of three steps: (I) the two reactants (R1, R2) first form a four‐membered ring intermediate (INT2) through a barrier‐free exothermic reaction of 0.5 kJ/mol; (II) INT2 further reacts with acetone (R2) to form an intermediate (INT5), which is also a barrier‐free exothermic reaction of 45.4 kJ/mol; (III) intermediate (INT5) isomerizes to a silapolycyclic compound (P5) via transition state (TS5) with an energy barrier of 49.3 kJ/mol. P4 and P5 are isomeric compounds. © 2009 Wiley Periodicals, Inc. Int J Quantum Chem, 2010     

Structural and conformational properties of 2-propenylgermane (allylgermane) studied by microwave and infrared spectroscopy and quantum chemical calculations

The structural and conformational properties of allylgermane have been investigated using Stark and Fourier transform microwave spectroscopies, infrared spectroscopy, and high-level quantum chemical calculations. The parent species H2C=CHCH2GeH3 was investigated by microwave spectroscopy and infrared spectroscopy, while three deuterated species, namely, H2C=CDCH2GeH3, H2C=CHCHDGeH3, and H2C=CHCH2GeD3, were studied only by infrared spectroscopy. The microwave spectra of the ground vibrational state as well as of the first excited state of the torsion vibration around the sp2-sp3 carbon-carbon bond were assigned for the 70Ge, 72Ge, and 74Ge isotopomers of one conformer. This rotamer has an anticlinal arrangement for the C=C-C-Ge chain of atoms. The infrared spectrum of the gas in the 500-4000 cm(-1) range has been assigned. No evidence of additional rotameric forms other than anticlinal was seen in the microwave and infrared spectra. Several different high-level ab initio and density functional theory calculations have been performed. These calculations indicate that a less stable form, having a synperiplanar conformation of the C=C-C-Ge link of atoms, may coexist with the anticlinal form. The energy differences between the synperiplanar and anticlinal forms were calculated to be 5.6-9.2 kJ/mol depending on the computational procedure. The best approximation of the equilibrium structure of the anticlinal rotamer was found in the MP2/aug-cc-pVTZ calculations. The barrier to internal rotation of the germyl group was found to be 6.561(17) kJ/mol, from measurements of the splitting of microwave transitions caused by tunneling of the germyl group through its threefold barrier.