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1.
Single-photon ionization dynamics of two conformers of glycine is studied by classical trajectory simulations using the semiempirical PM3 potential surface in "on the fly" calculations. Initial conditions for the trajectories are weighted according to the Wigner distribution function computed for the initial vibrational ground state. Vertical ionization in the spirit of the classical Franck-Condon principle is assumed. The dynamics of the two conformers are compared during the first 10 ps. The comparison shows very different dynamical behavior for the two conformers. In particular, the chemical fragmentation pathways differ in part. Also, one of the conformers gives much higher rates of conformational transitions, while the other conformer gives larger chemical fragmentation yields. The example shows significantly different chemical dynamics for two conformers close in energy and separated by a low barrier.  相似文献   

2.
We present laser photoacoustic spectra of ethyl hydroperoxide (EHP) for 3-6 quanta of O-H stretch. Spectra are consistent with ab initio spectral simulations that take into account the influence of torsional motion about the O-O bond on O-H stretch overtone excitation. Experimental and simulated spectra share two trends. First, spectral features due to torsional excitation, including hot bands, become more prominent with increasing O-H stretch excitation, as has been shown previously for similar molecules such as methyl hydroperoxide. Second, contributions from the two different EHP conformers become clearly distinguishable at higher O-H stretch excitation, mainly due to the role of torsional motion. Results are consistent with a higher energy separation (330 cm(-1)) between the lower energy anti and the higher energy gauche conformers than predicted by electronic structure calculations (137 cm(-1)). Calculated absorption intensities are consistently higher than experimental values by ~30% but within the experimental uncertainty. With each additional O-H stretch overtone, the dropoff in calculated integrated absorption intensities at room temperature becomes less extreme, with a 14-fold dropoff from 3ν(OH) to 4ν(OH) and an 8-fold decrease from 5ν(OH) to 6ν(OH).  相似文献   

3.
In this study we present the gas-phase vibrational spectrum of vinylacetic acid with a focus on the nu = 1-5 vibrational states of the OH stretching transitions. Cross sections for nu = 1, 2, 4 and 5 of the OH stretching vibrational transitions are derived on the basis of the vapor pressure data obtained for vinylacetic acid. Ab initio calculations are used to assist in the band assignments of the experimental spectra, and to determine the threshold for the decarboxylation of vinylacetic acid. When compared to the theoretical energy barrier to decarboxylation, it is found that the nu OH = 4 transition with thermal excitation of low frequency modes or rotational motion and nu OH = 5 transitions have sufficient energy for the reaction to proceed following overtone excitation.  相似文献   

4.
One-photon and two-photon ionization dynamics of tryptophan is studied by classical trajectory simulations using the semiempirical parametric method number 3 (PM3) potential surface in "on the fly" calculations. The tryptophan conformer is assumed to be in the vibrational ground state prior to ionization. Initial conditions for the trajectories are weighted according to the Wigner distribution function computed for that state. Vertical ionization in the spirit of the classical Franck-Condon principle is assumed. For the two-photon ionization process the ionization is assumed to go resonantively through the first excited state. Most trajectories are computed, and the analysis is carried out for the first 10 ps. A range of interesting effects are observed. The main findings are as follows: (1) Multiple conformational transitions are observed in most of the trajectories within the ultrafast duration of 10 ps. (2) Hydrogen transfer from the carboxyl group to the amino group and back has been observed. A zwitterion is formed as a transient state. (3) Two new isomers are formed during the dynamics, which have apparently not been previously observed. (4) Fast energy flow between the ring modes and the amino acid backbone is observed for both one- and two-photon ionization. However, the effective vibrational temperatures only approach the same value after 90 ps. The conformation transition dynamics, the proton-transfer processes and the vibrational energy flow are discussed and analyzed.  相似文献   

5.
The conformational isomerization dynamics of N-acetyl tryptophan methyl amide (NATMA) and N-acetyl tryptophan amide (NATA) have been studied using the methods of IR-UV hole-filling spectroscopy (HFS) and IR-induced population transfer spectroscopy (IR-PTS), which were developed for this purpose. Single conformations of these molecules were selectively excited in well-defined NH stretch fundamentals. This excess energy was used to drive conformational isomerization. By carrying out the infrared excitation early in a supersonic expansion, the excited molecules were recooled into their zero-point levels, partially refilling the hole created in the ground state population of one of the conformers, and creating gains in population in other conformers. These changes in population were detected using laser-induced fluorescence downstream in the expansion. In HFS, the IR wavelength is fixed and the UV laser tuned in order to determine where the population went following selective infrared excitation. In IR-PTS, the UV is fixed to monitor the population of a given conformation, and the IR is tuned to record the IR-induced changes in the population of the monitored conformer. Besides demonstrating the capability of the experiment to change the downstream conformational population distribution, the IR-PTS scans were used to extract two quantitative results: (i) The fractional populations of the conformers in the absence of the infrared, and (ii) the isomerization quantum yields for each of the six unique amide NH stretch fundamentals (three conformers each with two amide groups). The method for obtaining quantum yields is described in detail. In both NATMA and NATA, the quantum yields show modest conformational specificity, but only a hint of vibrational mode specificity. The prospects for the hole-filling technique for providing insight into energy flow in large molecules are discussed, leaving a more detailed theoretical modeling to the adjoining paper [Evans et al. J. Chem. Phys. 120, 148 (2004)].  相似文献   

6.
Proton transfer and dissociation processes following excitation of the OH or NH stretching modes of the proton-bound complex GlyLysH(+) are studied by classical trajectories. "On the fly" simulations with the PM3 semiempirical electronic structure method for the potential surface are used. Initial conditions are sampled to correspond to the v=1 excited state of the OH or NH stretching modes. Five different conformers of the complex are studied as initial structures. The main findings are (1) Photoinduced proton transfer is on the picosecond time scale. (2) Proton transfer is much faster than the processes of dissociation. (3) Proton transfer involves different sites. Most trajectories show sequences of two proton transfer events. (4) The proton transfer events show high selectivity with regard to the initially excited vibration and the initial structure. (5) Photodissociation of the complex occurs on a typical time scale of 100 ps. (6) Conformational transitions are found to be often faster than proton transfer. These results have implications for the mass spectrometry of complexes, for dynamics of proton wires, and for proton migration in proteins.  相似文献   

7.
Studies of vibrational energy flow in various polar and nonpolar molecules that follows the ultrafast excitation of the CH and OH stretch fundamentals, modeled using semiclassical methods, are reviewed. Relaxation rates are calculated using Landau-Teller theory and a time-dependent method, both of which consider a quantum mechanical solute molecule coupled to a classical bath of solvent molecules. A wide range of decay rates are observed, ranging from 1 ps for neat methanol to 50 ps for neat bromoform. In order to understand the flow rates, it is argued that an understanding of the subtle mixing between the solute eigenstates is needed and that solute anharmonicities are critical to facilitating condensed phase vibrational relaxation. The solvent-assisted shifts of the solute vibrational energy levels are seen to play a critical role of enhancing or decreasing lifetimes.  相似文献   

8.
High resolution photoelectron spectra of the n-methylvinoxide anion and its deuterated isotopologue are obtained by slow electron velocity-map imaging. Transitions between the X?(1)A' anion ground electronic state and the radical X?(2)A" and A?(2)A' states are observed. The major features in the spectra are attributed to transitions involving the lower energy cis conformers of the anion and neutral, while the higher energy trans conformers contribute only a single small peak. Franck-Condon simulations of the X?(2)A" ← X?(1)A' and A?(2)A' ← X?(1)A' transitions are performed to assign vibrational structure in the spectrum and to aid in identifying peaks in the cis-n-methylvinoxy X? (2)A" band that occur only through vibronic coupling. The experimental electron affinity and A? state term energy are found to be EA = 1.6106 ± 0.0008 eV and T(0) = 1.167 ± 0.002 eV for cis-n-methylvinoxy.  相似文献   

9.
Reactions of HOD(+) with CO(2) have been studied for HOD(+) in its ground state, and with one quantum of excitation in each of its vibrational modes: (001)--predominantly OH stretch, 0.396 eV; (010)--bend, 0.153 eV; and (100)--predominantly OD stretch, 0.293 eV. Integral cross sections and product recoil velocities were recorded for collision energies from threshold to 3 eV. The cross sections for both H(+) and D(+) transfer rise with increasing collision energy from threshold to ~1 eV, then become weakly dependent of the collision energy. All three vibrational modes enhance the total reactivity, but quite mode specifically. The H(+) transfer reaction is enhanced by OH stretch excitation, whereas OD stretch excitation has little effect. Conversely, the D(+) transfer reaction is enhanced by OD stretch excitation, while the OH stretch has little effect. Excitation of the bend strongly enhances both channels. The effects of the stretch excitations are consistent with previous studies of neutral HOD mode-selective chemistry, and can be at least qualitatively understood in terms of a late barrier to product formation. The fact that bend excitation produces the largest overall enhancement is surprising, because this is the lowest energy excitation, and is not obviously connected with the reaction coordinates for either H(+) or D(+) transfer. A rationalization in terms of the effects of water distortion on the potential surface is proposed.  相似文献   

10.
We present results of time-dependent quantum mechanics (TDQM) and quasiclassical trajectory (QCT) studies of the excitation function for O(3P) + H2(v = 0-3,j = 0) --> OH + H from threshold to 30 kcal/mol collision energy using benchmark potential energy surfaces [Rogers et al., J. Phys. Chem. A 104, 2308 (2000)]. For H2(v = 0) there is excellent agreement between quantum and classical results. The TDQM results show that the reactive threshold drops from 10 kcal/mol for v = 0 to 6 for v = 1, 5 for v = 2 and 4 for v = 3, suggesting a much slower increase in rate constant with vibrational excitation above v = 1 than below. For H2(v > 0), the classical results are larger than the quantum results by a factor approximately 2 near threshold, but the agreement monotonically improves until they are within approximately 10% near 30 kcal/mol collision energy. We believe these differences arise from stronger vibrational adiabaticity in the quantum dynamics, an effect examined before for this system at lower energies. We have also computed QCT OH(v',j') state-resolved cross sections and angular distributions. The QCT state-resolved OH(v') cross sections peak at the same vibrational quantum number as the H2 reagent. The OH rotational distributions are also quite hot and tend to cluster around high rotational quantum numbers. However, the dynamics seem to dictate a cutoff in the energy going into OH rotation indicating an angular momentum constraint. The state-resolved OH distributions were fit to probability functions based on conventional information theory extended to include an energy gap law for product vibrations.  相似文献   

11.
We use laser photoacoustic spectroscopy to obtain overtone spectra at three through six quanta of O-H stretch excitation (3nu(OH)-6nu(OH)) for methyl hydroperoxide (MeOOH). Extending the spectral regions beyond our previous work reveals new features that can be attributed to transitions involving torsion about the O-O bond. Experimental spectral profiles (3nu(OH)-6nu(OH)) and cross sections (3nu(OH)-5nu(OH)) at room temperature show a good agreement with the simulated spectra that we obtain from ab initio calculations employing a vibration-torsion model at 298 K. A Birge-Sponer analysis yields experimental values for the O-H stretch frequency (omega=3773+/-15 cm(-1)) and anharmonicity (omegax=94+/-3 cm(-1)). We also detect OH radicals by laser-induced fluorescence and present photodissociation action spectra of MeOOH in the regions of 4nu(OH) and 5nu(OH). While the spectral profile at 5nu(OH) mimics the photoacoustic spectrum, the peak intensity for transitions to torsionally excited states is relatively more intense in the action spectrum at 4nu(OH), reflecting the fact that the 4nu(OH) excitation energy is below the literature dissociation energy (D0=42.6+/-1 kcal mol(-1)) so that features in the action spectrum come from thermally populated excited states. Finally, we use our calculations to assign contributions to individual peaks in the room-temperature spectra and relate our findings to a recent dynamics study in the literature.  相似文献   

12.
The second OH overtone transition of the trans-perp conformer of peroxynitrous acid (tp-HOONO) is identified using infrared action spectroscopy. HOONO is produced by the recombination of photolytically generated OH and NO(2) radicals, and then cooled in a pulsed supersonic expansion. The second overtone transition is assigned to tp-HOONO based on its vibrational frequency (10 195.3 cm(-1)) and rotational band contour, which are in accord with theoretical predictions and previous observations of the first overtone transition. The transition dipole moment associated with the overtone transition is rotated considerably from the OH bond axis, as evident from its hybrid band composition, indicating substantial charge redistribution upon OH stretch excitation. The overtone band exhibits homogeneous line broadening that is attributed to intramolecular vibrational redistribution, arising from the coupling of the initially excited OH stretch to other modes that ultimately lead to dissociation. The quantum state distributions of the OH X (2)Pi (nu=0) products following first and second OH overtone excitation of tp-HOONO are found to be statistical by comparison with three commonly used statistical models. The product state distributions are principally determined by the tp-HOONO binding energy of 16.2(1) kcal mol(-1). Only a small fraction of the OH products are produced in nu=1 following the second overtone excitation, consistent with statistical predictions.  相似文献   

13.
The conformational preferences and infrared and ultraviolet spectral signatures of two model beta-peptides, Ac-beta3-hPhe-beta3-hAla-NHMe (1) and Ac-beta3-hAla-beta3-hPhe-NHMe (2), have been explored under jet-cooled, isolated-molecule conditions. The mass-resolved, resonant two-photon ionization spectra of the two molecules were recorded in the region of the S0-S1 origin of the phenyl substituents (37,200-37,800 cm(-1)). UV-UV hole-burning spectroscopy was used to determine the ultraviolet spectral signatures of five conformational isomers of both 1 and 2. Transitions due to two conformers (labeled A and B) dominate the R2PI spectra of each molecule, while the other three are minor conformers (C-E) with transitions a factor of 3-5 smaller. Resonant ion-dip infrared spectroscopy was used to obtain single-conformation infrared spectra in the 3300-3700 cm(-1) region. The infrared spectra showed patterns of NH stretch transitions characteristic of the number and type of intramolecular H-bonds present in the beta-peptide backbone. For comparison with experiment, full optimizations of low-lying minima of both molecules were carried out at DFT B3LYP/6-31+G*, followed by single point MP2/6-31+G* and selected MP2/aug-cc-pVDZ calculations at the DFT optimized geometries. Calculated harmonic vibrational frequencies and infrared intensities for the amide NH stretch vibrations were used to determine the beta-peptide backbone structures for nine of the ten observed conformers. Conformers 1B, 1D, and 2A were assigned to double ring structures containing two C6 H-bonded rings (C6a/C6a), conformers 1A and 2B are C10 single H-bonded rings, conformers 1C and 2D are double ring structures composed of two C8 H-bonded rings (C8/C8), and conformers 1E and 2E are double ring/double acceptor structures in which two NH groups H-bond to the same C=O group, thereby weakening both H-bonds. Both 1E and 2E are tentatively assigned to C6/C8 double ring/double acceptor structures, although C8/C12 structures cannot be ruled out unequivocally. Finally, no firm conformational assignment has been made for conformer 2C whose unusual infrared spectrum contains one very strong H-bond with NH stretch frequency at 3309 cm(-1), a second H-bonded NH stretch fundamental of more typical value (3399 cm(-1)), and a third fundamental at 3440 cm(-1), below that typical of a branched-chain free NH. The single conformation spectra provide characteristic wavenumber ranges for the amide NH stretch fundamentals ascribed to C6 (3378-3415 cm(-1)), C8 (3339-3369 cm(-1)), and C10 (3381-3390 cm(-1)) H-bonded rings.  相似文献   

14.
The gas phase spectra of several vibrational bands of peroxyformic acid (PFA), an atmospheric molecule exhibiting intramolecular hydrogen bonding, are presented. In the fundamental region, Fourier transform infrared (FT-IR) spectroscopy is used to probe the C-O, O-H and C-H stretching vibrations, while in the region of the first and second OH-stretching overtones (2ν(OH) and 3ν(OH)) photoacoustic spectroscopy is used. Integrated absorption cross sections for the PFA vibrational bands are determined by comparing their respective peak areas with that for the OH-stretching bands of n-propanol for which the absorption cross section is known. The measured integrated intensities of the OH stretching bands are then compared with a local mode model using a one-dimensional dipole moment function in conjunction with the OH stretching potential computed at both the MP2/aug-cc-pVDZ and CCSD(T)/aug-cc-pVDZ levels. The data allow us to investigate changes in the OH stretch band position and intensity as a function of overtone order arising from the influence of hydrogen bonding. Furthermore, calculations at the MP2/aug-cc-pVDZ level show that there are three stable conformers of PFA with relative energies of 0, 13.54, and 13.76 kJ/mol, respectively. In the room temperature spectra, however, we see evidence for transitions from only the lowest energy conformer. The geometrical parameters and vibrational frequencies of the most stable conformer are presented.  相似文献   

15.
Intramolecular vibrational energy redistribution (IVR) and vibrational predissociation (VP) from the XH stretching vibrations, where X refers to O or C atom, of aromatic molecules and their hydrogen(H)-bonded clusters are investigated by picosecond time-resolved IR-UV pump probe spectroscopy in a supersonic beam. For bare molecules, we mainly focus on IVR of the OH stretch of phenol. We describe the IVR of the OH stretch by a two-step tier model and examine the effect of the anharmonic coupling strength and the density of states on IVR rate and mechanism by using isotope substitution. In the H-bonded clusters of phenol, we show that the relaxation of the OH stretching vibration can be described by a stepwise process and then discuss which process is sensitive to the H-bonding strength. We discuss the difference/similarity of IVR/VP between the "donor" and the "acceptor" sites in phenol-ethylene cluster by exciting the CH stretch vibrations. Finally, we study the vibrational energy transfer in the isolated molecules having the alkyl chain, namely phenylalcanol (PA). In this system, we measure the rate constant of the vibrational energy transfer between the OH stretch and the vibrations of benzene ring which are connected at the both ends of the alkyl chain. This energy transfer can be called "through-bond IVR". We investigate the three factors which are thought to control the energy transfer rate; (1) "OH <--> next CH(2)" coupling, (2) chain length and (3) conformation. We discuss the energy transfer mechanism in PAs by examining these factors.  相似文献   

16.
The rotational spectra of four (GT, TT, TG, and GG) of the five possible conformers of 1-fluorobutane have been assigned by combining free jet and conventional microwave spectroscopy. The geometry optimization was performed at the MP2 (full) level of theory with the 6-31G (d) and 6-311G (d, p) basis sets and by using the B3LYP (3df, 3pd) density functional method. The relative stability of the five rotamers is calculated at the QCISD (T)/6-311G (d, p) level of theory. In spite of the fact that ab initio calculations indicated the unobserved GG' conformer to be more stable than at least one of the observed conformers it was not possible to detect its rotational spectrum. GT and TG are the most and the least stable species, respectively. The rotational spectra of several vibrational satellites of the four conformers have been studied by conventional microwave spectroscopy. The overall conformational equilibrium is governed by the two-dimensional potential energy surface of the skeletal torsions MeC-CC and FC-CC, which have been evaluated by a flexible model analysis, based on the experimental values of the relative conformational and vibrational energy spacings, and on the shifts of second moments of inertia upon conformational change and vibrational excitation. The relative energy of the fifth stable conformer (GG') was determined to be 333 cm(-1) from flexible model calculations, and to be 271 cm(-1) from the most accurate ab initio calculations.  相似文献   

17.
The dissociation of the hydroxymethyl radical, CH(2)OH, and its isotopolog, CD(2)OH, following excitation in the 4ν(1) region (OH stretch overtone, near 13,600 cm(-1)) was studied using sliced velocity map imaging. A new vibrational band near 13,660 cm(-1) arising from interaction with the antisymmetric CH stretch was discovered for CH(2)OH. In CD(2)OH dissociation, D atom products (correlated with CHDO) were detected, providing the first experimental evidence of isomerization in the CH(2)OH ? CH(3)O (CD(2)OH ? CHD(2)O) system. Analysis of the H (D) fragment kinetic energy distributions shows that the rovibrational state distributions in the formaldehyde cofragments are different for the OH bond fission and isomerization pathways. Isomerization is responsible for 10%-30% of dissociation events in all studied cases, and its contribution depends on the excited vibrational level of the radical. Accurate dissociation energies were determined: D(0)(CH(2)OH → CH(2)O + H) = 10,160 ± 70 cm(-1), D(0)(CD(2)OH → CD(2)O + H) = 10,135 ± 70 cm(-1), D(0)(CD(2)OH → CHDO + D) = 10,760 ± 60 cm(-1).  相似文献   

18.
Reactions of HOD(+) with N(2) have been studied for HOD(+) in its ground state and with one quantum of excitation in each of its vibrational modes: (001)--predominately OH stretch, 0.396 eV, (010)--bend, 0.153 eV, and (100)--predominately OD stretch, 0.293 eV. Integral cross sections and product recoil velocities were recorded for collision energies from threshold to 4 eV. The cross sections for both H(+) and D(+) transfer rise slowly from threshold with increasing collision energy; however, all three vibrational modes enhance reaction much more strongly than equivalent amounts of collision energy and the enhancements remain large even at high collision energy, where the vibration contributes less than 10% of the total energy. Excitation of the OH stretch enhances H(+) transfer by a factor of ~5, but the effect on D(+) transfer is only slightly larger than that from an equivalent increase in collision energy, and smaller than the effect from the much lower energy bend excitation. Similarly, OD stretch excitation strongly enhances D(+) transfer, but has essentially no effect beyond that of the additional energy on H(+) transfer. The effects of the two stretch vibrations are consistent with the expectation that stretching the bond that is broken in the reaction puts momentum in the correct coordinate to drive the system into the exit channel. From this perspective it is quite surprising that bend excitation also results in large (factor of 2) enhancements of both H(+) and D(+) transfer channels, such that its effect on the total cross section at collision energies below ~2 eV is comparable to those from the two stretch modes, even though the bend excitation energy is much smaller. For collision energies above ~2 eV, the vibrational effects become approximately proportional to the vibrational energy, though still much larger than the effects of equivalent addition of collision energy. Measurements of the product recoil velocity distributions show that reaction is direct at all collision energies, with roughly half the products in a sharp peak corresponding to stripping dynamics and half with a broad and approximately isotropic recoil velocity distribution. Despite the large effects of vibrational excitation on reactivity, the effects on recoil dynamics are small, indicating that vibrational excitation does not cause qualitative changes in the reaction mechanism or in the distribution of reactive impact parameters.  相似文献   

19.
Aiming for better understanding of the large complexity of excited-state processes in carotenoids, we have studied the excitation wavelength dependence of the relaxation dynamics in the carotenoid zeaxanthin. Excitation into the lowest vibrational band of the S2 state at 485 nm, into the 0-3 vibrational band of the S2 state at 400 nm, and into the 2B(u)+ state at 266 nm resulted in different relaxation patterns. While excitation at 485 nm produces the known four-state scheme (S2 --> hot S1 --> S1 --> S0), excess energy excitation led to additional dynamics occurring with a time constant of 2.8 ps (400 nm excitation) and 4.9 ps (266 nm excitation), respectively. This process is ascribed to a conformational relaxation of conformers generated by the excess energy excitation. The zeaxanthin S state was observed regardless of the excitation wavelength, but its population increased after 400 and 266 nm excitation, suggesting that conformers generated by the excess energy excitation are important for directing the population toward the S state. The S2-S1 internal conversion time was shortened from 135 to 70 fs when going from 485 to 400 nm excitation, as a result of competition between the S2-S1 internal conversion from the vibrationally hot S2 state and S2 vibrational relaxation. The S1 lifetime of zeaxanthin was within experimental error the same for all excitation wavelengths, yielding approximately 9 ps. No long-lived species have been observed after excitation by femtosecond pulses regardless of the excitation wavelength, but excitation by nanosecond pulses at 266 nm generated both zeaxanthin triplet state and cation radical.  相似文献   

20.
The bond dissociation energy (D(0)) of the water dimer is determined by using state-to-state vibrational predissociation measurements following excitation of the bound OH stretch fundamental of the donor unit of the dimer. Velocity map imaging and resonance-enhanced multiphoton ionization (REMPI) are used to determine pair-correlated product velocity and translational energy distributions. H(2)O fragments are detected in the ground vibrational (000) and the first excited bending (010) states by 2 + 1 REMPI via the C? (1)B(1) (000) ← X? (1)A(1) (000 and 010) transitions. The fragments' velocity and center-of-mass translational energy distributions are determined from images of selected rovibrational levels of H(2)O. An accurate value for D(0) is obtained by fitting both the structure in the images and the maximum velocity of the fragments. This value, D(0) = 1105 ± 10 cm(-1) (13.2 ± 0.12 kJ/mol), is in excellent agreement with the recent theoretical value of D(0) = 1103 ± 4 cm(-1) (13.2 ± 0.05 kJ∕mol) suggested as a benchmark by Shank et al. [J. Chem. Phys. 130, 144314 (2009)].  相似文献   

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