The N3+ reactivity in ionized gases containing sulfur, nitrogen, and carbon oxides.

The N(3)(+) reactivity with SO(2), N(2)O, CO(2), and CO is studied by mass spectrometric techniques under a wide range of pressures from 10(-7) to 10(-4) Torr. The kinetics, reaction mechanism, and role of vibrationally excited ions are investigated by experimental and theoretical methods. Key distinguishing features of the N(3) (+) reactivity are evidenced by comparison to N(+) and N(2)(+) ions, which mainly undergo charge-exchange reactions. The N(+) transfer to SO(2) prompts formation of NO(+) ions and neutral oxides NO and SO. The N(+) transfer to N(2)O also leads to NO(+) ions by a process not allowed by spin conservation rules. In both cases no reaction intermediate is detected, whereas CO(2) and CO are captured to form the very stable NCO(2) (+) and NCO(+) ions. NCO(2)(+) ions are characterized for the first time as strongly bound triplet ions of NOCO and ONCO connectivity. DFT and CCSD(T) computations have been carried out to investigate the structural and energetic features of the NCO(2) (+) species and their formation process.     

Isotope exchange in ionised CO2/CO mixtures: the role of asymmetrical C2O3+ ions

A hitherto unknown, atmospherically relevant, isotope-exchange reaction was studied in ionised gaseous mixtures containing carbon dioxide and monoxide. The mechanism of the O exchange, proceeding over a double-minimum potential-energy surface, was positively established by mass spectrometric and theoretical methods that also allowed the identification and characterisation of the C2O3+ intermediate. The increase of internal energy displaces the observed reactivity towards an endothermic reaction path that involves only CO2 and represents an indirect route to the dissociation of carbon dioxide.     

Radical Formation in the Gas‐Phase Ozonolysis of Deprotonated Cysteine

Although the deleterious effects of ozone on the human respiratory system are well‐known, many of the precise chemical mechanisms that both cause damage and afford protection in the pulmonary epithelial lining fluid are poorly understood. As a key first step to elucidating the intrinsic reactivity of ozone with proteins, its reactions with deprotonated cysteine [Cys?H]^? are examined in the gas phase. Reaction proceeds at near the collision limit to give a rich set of products including 1) sequential oxygen atom abstraction reactions to yield cysteine sulfenate, sulfinate and sulfonate anions, and significantly 2) sulfenate radical anions formed by ejection of a hydroperoxy radical. The free‐radical pathway occurs only when both thiol and carboxylate moieties are available, implicating electron‐transfer as a key step in this reaction. This novel and facile reaction is also observed in small cys‐containing peptides indicating a possible role for this chemistry in protein ozonolysis.     

Catalytic Removal of NOx from Gas Mixtures Simulating Emissions from the Combustion of Biofuels

The activity of knitted silica-fibre supported Pd, Pt, Pt-Ni, Pd-Ni and Pd-Pt-Ni catalysts as well as Pd based H-ZSM-5 and H-ZSM-35 catalysts was studied in the conversion of gas mixtures containing 200 ppm CH₄, 2500 ppm CO, 500 ppm pyridine (or 500 ppm NO), 10 vol.% O₂ (or 0.155 vol.% O₂), 12 vol.% CO₂, 12 vol.% H₂O, balanced with He at GHSV of 60000 h^–1. Pyridine was found to inhibit both CO and CH₄ oxidation. IR studies indicated that NO adsorbed on Pd²⁺ is the principal adsorbed species on the Pd/HZSM-5 catalyst.     

Charged and neutral NO3 isomers from the ionization of NOx and O3 mixtures

Mass spectrometric techniques have been utilized in conjunction with theoretical methods to detect and characterize new species formed upon ionization of gaseous mixtures containing ozone and an NOx oxide. NO5+ as well as isomeric NO4+ and NO3+ ions have been identified. Moreover, utilization of neutralization reionization mass spectrometry (NRMS) has provided strong evidence for, if not a conclusive demonstration of, the existence of a new NO3 isomer, in addition to the long-known trigonal radical, as a gaseous species with a lifetime in excess of approximately 1 microsecond.     

Xenon-nitrogen chemistry: gas-phase generation and theoretical investigation of the xenon-difluoronitrenium ion F2N-Xe+

The xenon–difluoronitrenium ion F₂N? Xe⁺, a novel xenon–nitrogen species, was obtained in the gas phase by the nucleophilic displacement of HF from protonated NF₃ by Xe. According to Møller–Plesset (MP2) and CCSD(T) theoretical calculations, the enthalpy and Gibbs energy changes (ΔH and ΔG) of this process are predicted to be ?3 kcal mol^?1. The conceivable alternative formation of the inserted isomers FN? XeF⁺ is instead endothermic by approximately 40–60 kcal mol^?1 and is not attainable under the employed ion‐trap mass spectrometric conditions. F₂N? Xe⁺ is theoretically characterized as a weak electrostatic complex between NF₂⁺ and Xe, with a Xe? N bond length of 2.4–2.5 Å, and a dissociation enthalpy and free energy into its constituting fragments of 15 and 8 kcal mol^?1, respectively. F₂N? Xe⁺ is more fragile than the xenon–nitrenium ions (FO₂S)₂NXe⁺, F₅SN(H)Xe⁺, and F₅TeN(H)Xe⁺ observed in the condensed phase, but it is still stable enough to be observed in the gas phase. Other otherwise elusive xenon–nitrogen species could be obtained under these experimental conditions.     

Bond‐Forming Reactions of Small Triply Charged Cations with Neutral Molecules

Time‐of‐flight mass spectrometry reveals that atomic and small molecular triply charged cations exhibit extensive bond‐forming chemistry, following gas‐phase collisions with neutral molecules. These experiments show that at collision energies of a few eV, I³⁺ reacts with a variety of small molecules to generate molecular monocations and molecular dications containing iodine. Xe³⁺ and CS₂³⁺ react in a similar manner to I³⁺, undergoing bond‐forming reactions with neutrals. A simple model, involving relative product energetics and electrostatic interaction potentials, is used to account for the observed reactivity.     

Gas-phase reactions of atomic lanthanide cations with D2O: room-temperature kinetics and periodicity in reactivity.

Reactions of atomic lanthanide cations (excluding Pm+) with D2O have been surveyed in the gas phase using an inductively coupled plasma/selected-ion flow tube (ICP/SIFT) tandem mass spectrometer to measure rate coefficients and product distributions in He at 0.35+/-0.01 Torr and 295+/-2 K. Primary reaction channels were observed corresponding to O-atom transfer, OD transfer and D2O addition. O-atom transfer is the predominant reaction channel and occurs exclusively with Ce+, Nd+, Sm+, Gd+, Tb+ and Lu+. OD transfer is observed exclusively with Yb+, and competes with O-atom transfer in the reactions with La+ and Pr+. Slow D2O addition is observed with early lanthanide cation Eu+ and the late lanthanide cations Dy+, Ho+, Er+ and Tm+. Higher-order sequential D2O addition of up to five D2O molecules is observed with LnO+ and LnOD+. A delay of more than 50 kcal mol(-1) is observed in the onset of efficient exothermic O-atom transfer, which suggests the presence of kinetic barriers of perhaps this magnitude in the exothermic O-atom transfer reactions of Dy+, Ho+, Er) and Tm+ with D2O. The reaction efficiency for O-atom transfer is seen to decrease as the energy required to promote an electron to make two non-f electrons available for bonding increases. The periodic trend in reaction efficiency along the lanthanide series matches the periodic trend in the electron-promotion energy required to achieve a d1s1 or d2 excited electronic configuration in the lanthanide cation, and also the periodic trends across the lanthanide row reported previously for several alcohols and phenol. An Arrhenius-like correlation is also observed for the dependence of D2O reactivity on promotion energy for early lanthanide cations, and exhibits a characteristic temperature of 2600 K.     

A combined ESI- and MALDI-MS(/MS) study of peripherally persulfonylated dendrimers: false negative results by MALDI-MS and analysis of defects

Mass spectrometry, in particular MALDI-MS, has often been used as a valuable means to characterize dendritic molecules with respect to their molecular masses. Also, it is a valuable tool for analyzing potential defects in their structure which result from incomplete synthetic steps. This article presents a comparison of ESI and MALDI mass spectrometric experiments on dendrimers persulfonylated at their periphery. While the ESI mass spectra easily permit impurities and defects to be identified and thus provide evidence for sample purity, reactions with acidic matrices occur during the MALDI process. The resulting defects are identical to those expected from incomplete substitution. Thus, in these cases, MALDI-MS yields false negative results. With mass-selected, ESI-generated ions, collision experiments were performed in an FT-ICR mass spectrometer cell to provide detailed insight into the fragmentation patterns of the various dendrimers. Different fragmentation patterns are observed depending on the exact structure of the dendrimer. Also, the nature of the charge is important. The fragmentation reactions for protonated species differ much from those binding a sodium or potassium ion. These differences can be traced back to different sites for binding H+ versus Na+ or K+. Tandem MS experiments on mass-selected dendrimer ions with defects can be used to distinguish different types of defects. A concise structural assignment can thus be made on the basis of these experiments. Even mixtures of two isobaric defect variants with the same elemental composition can be identified.     

Dendrimer Disassembly in the Gas Phase: A Cascade Fragmentation Reaction of Fréchet Dendrons

The mass spectrometric characterization of Fréchet‐type dendrons is reported. In order to provide the charges necessary for electrospray ionization, dendrons bearing an OH group at the focal point can be deprotonated and observed in the negative ion mode. Alternatively, the corresponding bromides can be converted to quaternary ammonium ions that can easily be detected in the positive mode. If the latter ions are subjected to collision‐induced dissociation experiments, a fragmentation cascade begins with the dissociation of the focal amine. The focal benzyl cation quickly decomposes in a fragmentation cascade from the focal point to the periphery until the peripheral benzyl (or naphthylmethyl) cations are formed. Five different mechanisms are discussed in detail, three of which can be excluded based on experimental evidence. The cascade fragmentation is reminiscent of self‐immolative dendrimers.     

Effect of alkali metal coordination on gas-phase chemistry of the diphosphate ion: the MH(2)P(2)O(7) (-) ions

Systematic experimental and theoretical studies on anionic phosphate species in the gas phase are almost nonexistent, even though they could provide a benchmark for enhanced comprehension of their liquid-phase chemical behavior. Gaseous MH(2)P(2)O(7) (-) ions (M=Li, Na, K, Rb, Cs), obtained from electrospray ionization of solutions containing H(4)P(2)O(7) and MOH or M salts as a source of M(+) ions were structurally assayed by collisionally activated dissociation (CAD) mass spectrometry and theoretical calculations at the B3LYP/6-31+G* level of theory. The joint application of mass spectrometric techniques and theoretical methods allowed the MH(2)P(2)O(7) (-) ions to be identified as having a structure in which the linear diphosphate anion is coordinated to the M(+) ion (I) and provides information on gas-phase isomerization processes in the [PO(3)...MH(2)PO(4)](-) clusters II and the [P(2)O(6)...M...H(2)O](-) clusters IV. Studies of gas-phase reactivity by Fourier transform ion cyclotron resonance (FTICR) and triple quadrupole (TQ) mass spectrometry revealed that the MH(2)P(2)O(7) (-) ions react with selected nucleophiles by clustering, proton transfer and addition-elimination mechanisms. The influence of the coordination of alkali metal ions on the chemical behavior of pyrophosphate is discussed.     

Gas-phase chemistry of diphosphate anions as a tool to investigate the intrinsic requirements of phosphate ester enzymatic reactions: the [M1M2HP2O7]- ions

Experimental studies on gaseous inorganic phosphate ions are practically nonexistent, yet they can prove helpful for a better understanding of the mechanisms of phosphate ester enzymatic processes. The present contribution extends our previous investigations on the gas-phase ion chemistry of diphosphate species to the [M(1)M(2)HP(2)O(7)](-) ions where M(1) and M(2) are the same or different and correspond to the Li, Na, K, Cs, and Rb cations. The diphosphate ions are formed by electrospray ionization of 10(-4) M solutions of Na(5)P(3)O(10) in CH(3)CN/H(2)O (1/1) and MOH bases or M salts as a source of M(+) cations. The joint application of mass spectrometric techniques and quantum-mechanical calculations makes it possible to characterize the gaseous [M(1)M(2)HP(2)O(7)](-) ions as a mixed ionic population formed by two isomeric species: linear diphosphate anion coordinated to two M(+) cations (group I) and [PO(3)M(1)M(2)HPO(4)](-) clusters (group II). The relative gas-phase stabilities and activation barriers for the isomerization I-->II, which depend on the nature of the M(+) cations, highlight the electronic susceptibility of P-O-P bond breaking in the active site of enzymes. The previously unexplored gas-phase reactivity of [M(1)M(2)HP(2)O(7)](-) ions towards alcohols of different acidity was investigated by Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR/MS). The reaction proceeds by addition of the alcohol molecule followed by elimination of a water molecule.     

Relative Ammonium Ion Affinities of 18-Crown-6 and the Isomers of Dicyclohexano-18-Crown-6

Complexes of cis-syn-cis- and cis-anti-cis-dicyclohexano-18-crown-6(DC18C6) with ammonium, methylammonium, propylammonium, isopropylammonium,butylammonium, isobutylammonium, and tert-butylammonium were generated andstudied in the gas phase using Fourier transform ion cyclotron resonancemass spectrometry to measure exchange equilibrium constants of the guestswith unsubstituted 18-crown-6 (18C6). Semiempirical calculations at the PM3level were also performed for all the complexes. Both the experiments andthe calculations indicate that sterically unhindered ammonium cations bindDC18C6 in preference to 18C6, but that preference decreases or vanishes forammonium cations branched at the carbon. The cis-syn-cis isomer hashigher ammonium affinities than the cis-anti-cis isomer. The experiments andthe calculations both suggest that in the cis-syn-cis isomer the ammoniumcations preferentially bind on the face of the macroring enclosed by thecyclohexano units, but again this preference decreases for stericallycrowded ammonium substituents. These trends are explained in terms of theability of the substituents in the host to stabilize the charge of the guest.     

Photofragmentation of 2‐Deoxy‐D‐Ribose Molecules in the Gas Phase

We have measured the synchrotron‐induced photofragmentation of isolated 2‐deoxy‐D ‐ribose molecules (C₅H₁₀O₄) at four photon energies, namely, 23.0, 15.7, 14.6, and 13.8 eV. At all photon energies above the molecule′s ionization threshold we observe the formation of a large variety of molecular cation fragments, including CH₃⁺, OH⁺, H₃O⁺, C₂H₃⁺, C₂H₄⁺, CH_xO⁺ (x=1,2,3), C₂H_xO⁺ (x=1–5), C₃H_xO⁺ (x=3–5), C₂H₄O₂⁺, C₃H_xO₂⁺ (x=1,2,4–6), C₄H₅O₂⁺, C₄H_xO₃⁺ (x=6,7), C₅H₇O₃⁺, and C₅H₈O₃⁺. The formation of these fragments shows a strong propensity of the DNA sugar to dissociate upon absorption of vacuum ultraviolet photons. The yields of particular fragments at various excitation photon energies in the range between 10 and 28 eV are also measured and their appearance thresholds determined. At all photon energies, the most intense relative yield is recorded for the m/q=57 fragment (C₃H₅O⁺), whereas a general intensity decrease is observed for all other fragments— relative to the m/q=57 fragment—with decreasing excitation energy. Thus, bond cleavage depends on the photon energy deposited in the molecule. All fragments up to m/q=75 are observed at all photon energies above their respective threshold values. Most notably, several fragmentation products, for example, CH₃⁺, H₃O⁺, C₂H₄⁺, CH₃O⁺, and C₂H₅O⁺, involve significant bond rearrangements and nuclear motion during the dissociation time. Multibond fragmentation of the sugar moiety in the sugar–phosphate backbone of DNA results in complex strand lesions and, most likely, in subsequent reactions of the neutral or charged fragments with the surrounding DNA molecules.