Fluorescence Spectroscopy of Single Molecules under Ambient Conditions: Methodology and Technology

This review presents an overview of the fluorescence detection and spectroscopy of single molecules (SMS) in liquids and on surfaces under ambient conditions. The various techniques of SMS, such as confocal epifluorescence detection and wide‐field imaging are presented and discussed, together with the different methods of data analysis such as fluorescence correlation spectroscopy and burst‐by‐burst analysis. Selected applications of the various techniques in physics, chemistry, and biology are described.     

Ultrafast fluorescence depolarisation in the yellow fluorescent protein due to its dimerisation.

Transient absorption spectroscopy with sub-100 fs time resolution was performed to investigate the oligomerisation behaviour of eYFP in solution. A single time constant tau(AD)=2.2+/-0.15 ps is sufficient to describe the time-resolved anisotropy decay up to at least 200 ps. The close contact of two protein barrels is deduced as the exclusive aggregation state in solution. From the final anisotropy r(infinity)=0.28+/-0.02, the underlying quaternary structure can be traced back to the somewhat distorted structure of the dimers of wt-GFP. The use of autofluorescent proteins as rulers in F?rster resonance energy transfer (FRET) measurements may demand polarisation-sensitive detection of the fluorescence with high time resolution.     

Force Spectroscopy of Individual Stimulus‐Responsive Poly(ferrocenyldimethylsilane) Chains: Towards a Redox‐Driven Macromolecular Motor

Summary: Progress in the development of a redox‐driven macromolecular motor and the characterization of its redox‐mechanical cycle using electrochemical AFM‐based single‐molecule force spectroscopy (SMFS) is described. The elasticities of individual neutral and oxidized poly(ferrocenyldimethylsilane) (PFS) macromolecules were reversibly controlled in situ by adjusting the potential in electrochemical SMFS experiments. For the operating cycle of one individual PFS‐based molecular motor, an output of 3.4 × 10⁻¹⁹ J and an efficiency of 5% have been estimated.

Force‐extension curves of a single‐molecule motor.     

Single-molecule fluorescence spectroscopy of protein folding.

Single-molecule spectroscopy is an important new approach for studying the intrinsically heterogeneous process of protein folding. This Review illustrates how different single-molecule fluorescence techniques have improved our understanding of mechanistic aspects in protein folding, exemplified by a series of recent experiments on a small protein.     

Poly(p‐phenylenevinylene) Derivatives with Defined Conjugation Segments and Post‐Polymerization Modification with Sterically Enshrouded Chromophores

Two poly(p‐phenylenevinylene) derivative alternating copolymers ( P1‐I and P2‐I ) have been prepared featuring iodo substituents and m‐phenylene units to periodically disrupt conjugation. P1‐I was derivatized with various chromophores to yield P1a‐f . In P1a‐f , the chromophores were positioned within a sterically protected pocket shielding them from interchain interactions so that intrachain interactions between polymer segments could be observed. Solution and film properties of polymers have been examined. Post‐polymerization chromophore modification leads to new photophysical properties such as intramolecular charge transfer and fluorescent resonance energy transfer processes in some cases.

     

New Water‐Soluble Cationic Poly(p‐phenylenevinylene) Derivative: the Interaction with DNA and Selective Fluorescence Enhancement Induced by ssDNA

A new cationic cyano‐substituted poly(p‐phenylenevinylene) (N‐CNPPV) is synthesized by Knoevenagel condensation. The water‐soluble polymer shows different emission spectra in different solvents and displays unique fluorescent behaviors in the mixed solvents of water and THF. The new polymer can form a complex with ssDNA by adopting a more planar conformation, exhibiting red shift of emission wavelength and enhancement of fluorescence intensity. By investigating the fluorescent response of N‐CNPPV to various surfactants, we demonstrate that the hydrophobic interaction and electrostatic interaction result in the selective response of N‐CNPPV to ssDNA. This is the first report on selective fluorescence enhancement of conjugated polyelectrolyte induced by ssDNA.     

Synthesis and characterization of novel germanium‐containing poly(p‐phenylenevinylene) derivatives

Novel blue‐emitting germanium‐containing poly(p‐phenylenevinylene) (PPV) derivatives with well‐defined conjugation lengths were synthesized via Wittig‐condensation polymerizations. The polymers can be color‐tuned by the introduction of various chromophores into the PPV‐based polymer backbones. The photoluminescence (PL) spectra of the polymers, GePVK (containing carbazole moieties), GeMEH (containing dialkoxybenzene moieties), and GePTH (containing phenothiazine moieties), were found to exhibit blue, greenish blue, and green emissions, respectively. GePTH produces more red‐shifted emission than GeMEH and GEPVK, resulting in green emission, and the solution and solid state PL spectra of GePVK consist of almost blue emission. The electroluminescence spectra of GeMEH and GePTH contain yellowy green and yellow colors, respectively. Interestingly, GePVK exhibits white emission with CIE coordinates of (0.33, 0.37) due to electroplex emission in the light‐emitting diodes. © 2007 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 46: 979–988, 2008