When Self‐Assembly Fails: Stepwise Metal‐Directed Synthesis of [2]Catenanes

On the attempted synthesis of a series of homo‐ and heterotrimetallic [2]catenanes by the self‐assembly of a 2‐(pyridin‐4‐ylmethyl)‐2,7‐diazapyrenium ligand, (ethylenediamine)palladium(II) or platinum(II) nitrate, and a dioxoaryl bis(N‐monoalkyl‐4,4′‐bipyridinium) salt as building blocks, both the one‐pot direct self‐assembly of the components and the so called “magic ring” approach fail to produce the expected trinuclear [2]catenanes under thermodynamically driven conditions. However, one of the target supramolecules is obtained by following a stepwise protocol, consisting of the threading of a dinuclear Pt^II metallacycle and the dioxoaryl bis(N‐monoalkyl‐4,4′‐bipyridinium) axle, followed by kinetically controlled Pt^II‐directed cyclization of the corresponding pseudorotaxane.     

Toward Electrochemically Controllable Tristable Three‐Station [2]Catenanes

Encouraged by the prospect of producing an electrochemical, color‐switchable red–green–blue (RGB) dye compound, we have designed, synthesized, and characterized two three‐station [2]catenanes. Both are composed of macrocyclic polyethers containing three π‐electron‐rich stations, which act as recognition sites for a π‐electron‐deficient tetracationic cyclophane. The molecular structures of the two three‐station [2]catenanes were characterized fully by mass spectrometry and ¹H NMR spectroscopy. To anticipate the relative occupancies of the three stations in each [2]catenane by the cyclophane, model compounds with the same constitutions in the vicinity of the stations were synthesized. The relative ground‐state populations of the three stations occupied in both [2]catenanes were estimated from the thermodynamic parameters for 1:1 complexes between all these model compounds and the cyclophane, obtained from isothermal titration calorimetry (ITC). The electrochemical and electromechanical properties of the three‐station [2]catenanes were analyzed by cyclic voltammetry (CV), differential pulse voltammetry (DPV), and spectroelectrochemistry (SEC). The first three‐station [2]catenane was found to behave like a bistable system, whereas the second can be described as a quasi‐tristable system.     

Halogen‐ and Hydrogen‐Bonding Catenanes for Halide‐Anion Recognition

Halogen‐bonding (XB) interactions were exploited in the solution‐phase assembly of anion‐templated pseudorotaxanes between an isophthalamide‐containing macrocycle and bromo‐ or iodo‐functionalised pyridinium threading components. ¹H NMR spectroscopic titration investigations demonstrated that such XB interpenetrated assemblies are more stable than analogous hydrogen bonding (HB) pseudorotaxanes. The stability of the anion‐templated halogen‐bonded pseudorotaxane architectures was exploited in the preparation of new halogen‐bonding interlocked catenane species through a Grubbs’ ring‐closing metathesis (RCM) clipping methodology. The catenanes’ anion recognition properties in the competitive CDCl₃/CD₃OD 1:1 solvent mixture revealed selectivity for the heavier halides iodide and bromide over chloride and acetate.     

De Novo Construction of Catenanes with Dissymmetric Cages by Space‐Discriminative Post‐Assembly Modification

Considerable efforts have been made to increase the topological complexity of mechanically interlocked molecules over the years. Three‐dimensional catenated structures composed of two or several (usually symmetrical) cages are one representative example. However, owing to the lack of an efficient universal synthetic strategy, interlocked structures made up of dissymmetric cages are relatively rare. Since the space volume of the inner cavity of an interlocked structure is smaller than that outside it, we developed a novel synthetic approach with the voluminous reductant NaBH(OAc)₃ that discriminates this space difference, and therefore selectively reduces the outer surface of a catenated dimer composed of two symmetric cages, thus yielding the corresponding catenane with dissymmetric cages. Insight into the template effect that facilitates the catenation of cages was provided by computational and experimental techniques.     

Supramolecular Control of Spin Exchange in a Spin‐Labelled [2]Rotaxane Incorporating a Tetrathiafulvalene Unit

The EPR properties of a novel triradical obtained by single‐electron oxidation of a nitroxide‐spin‐labelled rotaxane containing a tetrathiafulvalene unit and cyclobis(paraquat‐p‐phenylene) ring is reported. Rotaxanation is proved to have a dramatic effect on through‐space magnetic interactions between radical fragments. Analysis of the EPR spectra by a three‐jump model, allowed us to obtain structural information on the interlocked structure.     

Synthesis by ring closing metathesis and properties of an electroactive calix[6]arene [2]catenane

Abstract

Tris-(N-phenylureido)-calix[6]arenes are heteroditopic non-symmetric molecular wheels that, in apolar media, bind viologen-based molecular axles in a pseudorotaxane-type fashion. Because of the precise kinetic requirements associated with the threading process, in apolar solvents, the dicationic portion of the axle enters the calixarene annulus exclusively from the upper rim. With the general aim to develop new prototypes of molecular devices and machines whose functions could be governed through a wider set of control elements, we envisaged that the unique properties of these calixarene wheels could be transferred to the synthesis of new catenanes for the construction of unidirectional rotary motors. Herein, we describe the synthesis of a tris(N-phenylureido)calix[6]arene-based catenane by applying the intramolecular ring-closing metathesis reaction for the catenation step on a pre-formed pseudorotaxane.     

Shuttling dynamics in an acid-base-switchable [2]rotaxane.

Molecular shuttles are an intriguing class of rotaxanes which constitute prototypes of mechanical molecular machines and motors. By using stopped-flow spectroscopic techniques in acetonitrile solution, we investigated the kinetics of the shuttling process of a dibenzo[24]crown-8 ether (DB24C8) macrocycle between two recognition sites or "stations"--a secondary ammonium (-NH2+-)/amine (-NH-) center and a 4,4'-bipyridinium (bipy2+) unit--located on the dumbbell component in a [2]rotaxane. The affinity for DB24C8 decreases in the order -NH2+- > bipy2+ > -NH-. Hence, shuttling of the DB24C8 macrocycle can be obtained by deprotonation and reprotonation of the ammonium station, reactions which are easily accomplished by addition of base and acid to the solution. The rate constants were measured as a function of temperature in the range 277-303 K, and activation parameters for the shuttling motion in both directions were determined. The effect of different counterions on the shuttling rates was examined. The shuttling from the -NH2+- to the bipy2+ station, induced by the deprotonation of the ammonium site, is considerably slower than the shuttling in the reverse direction, which is, in turn, activated by reprotonation of the amine site. The results show that the dynamics of the shuttling processes are related to the change in the intercomponent interactions and structural features of the two mutually interlocked molecular components. Our observations also indicate that the counterions of the cationic rotaxane constitute an important contribution to the activation barrier for shuttling.     

Self‐Assembly of Calix[6]arene–Diazapyrenium Pseudorotaxanes: Interplay of Molecular Recognition and Ion‐Pairing Effects

The calix[6]arene wheel CX forms pseudorotaxane species with the diazapyrenium‐based axle 1? 2PF₆ in CH₂Cl₂ solution. The macrocyclic component is a heteroditopic receptor, which can complex the electron‐acceptor moiety of the axle inside its cavity and the counterions with the ureidic groups on the upper rim. The self‐assembled supramolecular species is a complex structure, which involves three components—the wheel, the axle and its counterions—that can mutually interact and affect. The stoichiometry of the resulting supramolecular complex depends on the nature and concentration of the counterions. Namely, it is observed that in dilute solution and with low‐coordinating anions the axle takes two wheels, whereas with highly coordinating anions or in concentrated solutions the complex has a 1:1 stoichiometry.     

Thioether‐Functionalized Quinone‐Based Resorcin[4]arene Cavitands: Electroswitchable Molecular Actuators

The utility of molecular actuators in nanoelectronics requires activation of mechanical motion by electric charge at the interface with conductive surfaces. We functionalized redox‐active resorcin[4]arene‐quinone cavitands with thioethers as surface‐anchoring groups at the lower rim and investigated their propensity to act as electroswitchable actuators that can adopt two different conformations in response to changes in applied potential. Molecular design was assessed by DFT calculations and X‐ray analysis. Electronic properties were experimentally studied in solution and thin films electrochemically, as well as by X‐ray photoelectron spectroscopy on gold substrates. The redox interconversion between the oxidized (quinone, Q ) and the reduced (semiquinone, SQ ) state was monitored by UV‐Vis‐NIR spectroelectrochemistry and EPR spectroscopy. Reduction to the SQ state induces a conformational change, providing the basis for potential voltage‐controlled molecular actuating devices.     

Single‐Walled Carbon Nanotube Based Molecular Switch Tunnel Junctions

This article describes two‐terminal molecular switch tunnel junctions (MSTJs) which incorporate a semiconducting, single‐walled carbon nanotube (SWNT) as the bottom electrode. The nanotube interacts noncovalently with a monolayer of bistable, nondegenerate [2]catenane tetracations, self‐organized by their supporting amphiphilic dimyristoylphosphatidyl anions which shield the mechanically switchable tetracations from a two‐micrometer wide metallic top electrode. The resulting 0.002 μm² area tunnel junction addresses a nanometer wide row of ≈2000 molecules. Active and remnant current–voltage measurements demonstrated that these devices can be reconfigurably switched and repeatedly cycled between high and low current states under ambient conditions. Control compounds, including a degenerate [2]catenane, were explored in support of the mechanical origin of the switching signature. These SWNT‐based MSTJs operate like previously reported silicon‐based MSTJs, but differently from similar devices incorporating bottom metal electrodes. The relevance of these results with respect to the choice of electrode materials for molecular electronics devices is discussed.     

Acid‐Base Switchable [2]‐ and [3]Rotaxane Molecular Shuttles with Benzimidazolium and Bis(pyridinium) Recognition Sites

For the purpose of developing higher level mechanically interlocked molecules (MIMs), such as molecular switches and machines, a new rotaxane system was designed in which both the 1,2‐bis(pyridinium)ethane and benzimidazolium recognition templating motifs were combined. These two very different recognition sites were successfully incorporated into [2]rotaxane and [3]rotaxane molecular shuttles which were fully characterized by ¹H NMR, 2D EXSY, single‐crystal X‐ray diffraction and VT NMR analysis. By utilizing benzimidazolium as both a recognition site and stoppering group it was possible to create not only an acid/base switchable [2]rotaxane molecular shuttle (energy barrier 20.9 kcal?mol^?1) but also a [3]rotaxane molecular shuttle that displays unique dynamic behavior involving the simultaneous motion of two macrocyclic wheels on a single dumbbell. This study provides new insights into the design of switchable molecular shuttles. Due to the unique properties of benzimidazoles, such as fluorescence and metal coordination, this new type of molecular shuttle may find further applications in developing functional molecular machines and materials.     

Co‐Conformational Isomerism in a Neutral Ion‐Paired Supramolecular System

Two different counter‐ion‐free host–guest complexes have been prepared and isolated. These compounds were formed from two equally and opposite doubly‐charged species, the viologen guests 1 a ²⁺ and 1 b ²⁺ and the anti‐disulfodibenzo[24]crown‐8 [ DSDB24C8] ^2? host, which gave rise to the 1:1 neutral complexes [ 1 a?DSDB24C8 ] and [ 1 b?DSDB24C8 ]. These species are held together by hydrogen bonding and π stacking, as well as strong electrostatic interactions. The investigation of these neutral ion‐paired supramolecular systems in solution and in the solid state allowed us to establish their co‐conformational preferences. Compound [ 1 a?DSDB24C8 ], with small methyl groups as substituents on the viologen unit, may adopt three different geometries, 1) an exo nonthreaded, 2) a partially threaded, and 3) a threaded arrangement, depending on the relative spatial orientation between the host and guest: The partially‐threaded structure is preferred in solution and in the solid state. The presence of bulky tert‐butylbenzyl groups in the viologen moiety in compound [ 1 b?DSDB24C8 ] restricts the possible geometrical arrangements to one: The exo nonthreaded arrangement. This structure was confirmed in the solid state by X‐ray crystallography. The stability of the neutral complexes in solution was determined by UV/Vis spectrophotometry. The stoichiometry of the complexes was established by continuous variation experiments, and overall equilibrium constants and ΔG° values were determined on the basis of dilution experiments. The results observed are a consequence of only the intrinsic stability of the complexes as there are no additional contributions from counter ions.