New applications of the retention index concept in gas and high performance liquid chromatography

New methods for the precalculation of GC retention indices (RIs) are discussed. The first is based on a new modification of the correlation equation log RI = a logT_b + bA + c and is recommended for low boiling compounds of the general type R-X with known boiling points (T_b) analyzed on polymer sorbent Porapack Q. The second method permits one to predict RIs of products of organic reactions A + B → C +… with the correlation ΔRI = a ΔE + b (a < 0,|ρ| > 0.9), where ΔRI = RI_C– RI_A– RI_B and ΔE = E_C– E_A– E_B– are the differences in the internal molecular energies of reagents and products of organic reactions which are estimated by molecular dynamics methods. In the final section new possibilities of the use of RIs in reversed phase HPLC, namely for the determination of the number of hydroxyl groups in phenols, are illustrated. Received: 9 November 1998 / Revised: 15 April 1999 / Accepted: 30 April 1999     

Identification of the chlorination products of aliphatic ketones by gas chromatography and gas chromatography/mass spectrometry

The differences in the gas chromatographic retention indices of the chlorination products of aliphatic ketones and parent carbonyl compounds (ΔRI) are constant, and their numeric values depend on the number and position of chlorine atoms in the molecule. A simplest version of an additive scheme for the evaluation of retention indexes is developed to identify the chloro derivatives of carbonyl compounds. The order of the chromatographic elution of diastereomeric α,α′-dichloro-k-alkanones (k > 2) is found.     

Structure-retention correlations of hydrocarbons in gas-liquid and gas-solid chromatography. Cycloalkenes and cycloalkadienes

Summary The retention indices of cycloalkenes and cycloalkadienes with C₆–C₁₃ rings are determined by gas-liquid chromatography (GLC) on glass capillary columns coated with OV-1 and Ucon LB 550X and by gas-solid chromatography (GSC) on a microcolumn packed with uncoated graphitized thermal carbon black (GTCB). Structure — retention correlations are derived on using index differences such as H^OV, H^GTCB and ΔI values, considering the differences in the stereochemistry of these compounds. It is shown that the combined application of index increments obtained in GLC and GSC provides more detailed structure informations. The value of the retention index units agree with the most stable conformations of the alicyclic compounds. The high value for the energy equivalent to an index unit (ΔG_I.U.=4.18kJ/mol) confirmes that graphitized thermal carbon black causes much stronger dispersive interactions than any nonpolar liquid phase. Dedicated to Prof. Dr. E. sz. Kováts (Ecola Polytechnique Fédérale de Lausanne) on the occasion of his sixtieth birthday.     

Analysis of vitamin E in food and phytopharmaceutical preparations by HPLC and HPLC-APCI-MS-MS

Summary The analysis of α, β, γ, δ-tocopherols, trienols, α-tocopheryl acetate and nicotinate (vitamin E) in complex matrices was carried out using a new liquid chromatographic (HPLC) method giving better separation efficiency, selectivity and sensitivity than that described in the literature. The use of normal-phase (NP)-HPLC on silica gel with issoctane-diisopropylether-1,4-dioxane as optimized mobilepphase yielded higher resolution than conventional reversed-phase (RP)-HPLC using methanol mobile phase. Identification of peaks was by UV-absorbance at 295 nm, diode array, or fluorescence detection (λ _ex = 295 nm,λ _ex = 330 nm). The latter was found to be more selective and ten times more sensitive than UV-absorbance detection. A quadrupole, ion-trap mass spectrometer with an atmospheric-pressure ionization (APCl) interface was used to detect vitamin E constituents in the femtomole range. With collision-induced dissociation (CID) in the ion source, which gave characteristic fragmentation, the identity of the investigated compounds could be confirmed. Plots of peak area versus amount injected allowed quantitation of α, β, γ, δ-tocopherols and-trienols, α-tocopheryl acetate and nicotinate in real samples such as peanut, almond, spinach, spelt grain bran, latex and tablets. The method described offers fast identification and quantitation of vitamin E constituents of complex biological origin. Dedicated to Professor Dr. Heinz Engelhardt on the occasion of his 65^th birthday.     

New metal-rich mixed chalcogenides with an intergrowth structure: Ni<Subscript>5.68</Subscript>SiSe<Subscript>2</Subscript>, Ni<Subscript>5.46</Subscript>GeSe<Subscript>2</Subscript>, and Ni<Subscript>5.42</Subscript>GeTe<Subscript>2</Subscript>

New metal-rich mixed nickel-silicon and nickel-germanium chalcogenides, Ni_5.68SiSe₂, Ni_5.46GeSe₂, and Ni_5.42GeTe₂, were synthesized by high-temperature ceramic techniques. The X-ray diffraction study of single crystals grown from a molten flux revealed that the compounds are isostructural and crystallize in the tetragonal system (space group I4/mmm, Z = 2). These compounds are the first members of the family of M_7−δEX₂-type (M = Ni or Pd; E = Sn or Sb; X is chalcogen) intergrowth structures containing “light” p elements E. Resistivity measurements on pressed textured pellets showed that both selenides are anisotropic metallic conductors in the directions parallel and perpendicular to the heterometallic bond systems. The geometric criteria of stability of the intergrowth structure type under consideration are discussed. Dedicated to Academician G. A. Abakumov on the occasion of his 70th birthday. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 9, pp. 1632–1638, September, 2007.     

The thermodynamic properties of delta-lactones

The enthalpies of formation of δ-hexanolactone and δ-nonanolactone were determined by combustion calorimetry. Conformational analysis and quantum-chemical calculations of equilibrium structures, fundamental vibrations, moments of inertia, and total energies were performed for δ-pentanolactone (I), δ-hexanolactone (II), and δ-nonanolactone (III) by the B3LYP/6-311G(d,p), B3LYP/6-311++G(d,p), and G3MP2 methods. The experimental IR spectra and calculated vibrational frequencies were used to suggest the assignment of vibrational frequencies of stable conformations. The thermodynamic properties of I–III in the ideal gas state were determined over the temperature range 0–1500 K. A thermodynamic analysis of mutual isomerization in the gas and liquid phases over the temperature range 298.15–900 K and liquid-phase polymerization of γ- and δ-pentanolactones and 4-pentenoic acid over the temperature range 298.15–500 K was performed.     

Gas chromatographic indicator of the ability of five- and six-membered heterocyclic nitrogen-containing compounds for self-association in pure liquids

The retention indices of five- and six-membered nitrogen-containing heterocyclic compounds (pyrrole, pyrazole, imidazole, 1,2,4-triazole, pyridine, pyridazine, pyrimidine, pyrazine, 1,3,5-triazine, isoxazole, and oxazole) were determined on a capillary column with the OV-101 nonpolar stationary phase. The difference between the experimentally determined boiling point of the sorbate and that calculated from GC data (δT _b.p.) was proposed as a gas chromatographic indicator sensitive to the ability of substances to form self-associates in pure liquids. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 4, pp. 730–733, April, 1999.     

The calculation of electron localization and delocalization indices at the Hartree–Fock, density functional and post-Hartree–Fock levels of theory

 Localization, λ(A), and delocalization indices, δ(A,B), as defined in the atoms in molecules theory, are a convenient tool for the analysis of molecular electronic structure from an electron-pair perspective. These indices can be calculated at any level of theory, provided that first- and second-order electron densities are available. In particular, calculations at the Hartree–Fock (HF) and configuration interaction (CI) levels have been previously reported for many molecules. However, λ(A) and δ(A,B) cannot be calculated exactly in the framework of Kohn–Sham (KS) density functional theory (DFT), where the electron-pair density is not defined. As a practical workaround, one can derive a HF-like electron-pair density from the KS orbitals and calculate approximate localization and delocalization indices at the DFT level. Recently, several calculations using this approach have been reported. Here we present HF, CI and approximate DFT calculations of λ(A) and δ(A,B) values for a number of molecules. Furthermore, we also perform approximate CI calculations using the HF formalism to obtain the electron-pair density. In general, the approximate DFT and CI results are closer to the HF results than to the CI ones. Indeed, the approximate calculations take into account Coulomb electron correlation effects on the first-order electron density but not on the electron-pair density. In summary, approximate DFT and CI localization and delocalization indices are easy to calculate and can be useful in the analysis of molecular electronic structure; however, one should take into account that this approximation increases systematically the delocalization between covalently bonded atoms, with respect to the exact CI results. Received: 13 February 2002 / Accepted: 24 April 2002 / Published online: 18 June 2002     

Molecular dynamics in fluorinated side-chain maleimide copolymers as studied by broadband dielectric spectroscopy

A series of alternating maleimide (MI) copolymers with fluorinated side chains have been investigated using broadband dielectric spectroscopy. The side chains consist of fluoroalkane (–C _x F_2x+1, x=1, 7, 9) end groups connected to the main chain via methylene spacers. The experiments were carried out in a frequency range of 0.1 Hz to 10 MHz and at temperatures between 120 K and 500 K. The fluorinated MI copolymers show a fast sub-T _g (β) relaxation characterized by an Arrhenius-type temperature dependence with activation energy in the range of 30–37 kJ/mol. Two more processes (α and δ-like) are observed, corresponding to independent relaxations of the main chain and the fluoroalkane domains respectively. For shorter side chains, the δ-like process is not observed but instead another relaxation process, α _S , occurs at temperatures higher than either the α and δ-like processes. When compared with unfluorinated MI copolymers, the fluorinated MI copolymers show the δ-like process and a slower β-relaxation unlike their unfluorinated counterparts. A model to explain the molecular origin of the four processes is proposed, supplemented by differential scanning calorimetry and published WAXS/SAXS data.     

New applications of the retention index concept in gas and high performance liquid chromatography

New methods for the precalculation of GC retention indices (RIs) are discussed. The first is based on a new modification of the correlation equation log RI = a logT_b + bA + c and is recommended for low boiling compounds of the general type R-X with known boiling points (T_b) analyzed on polymer sorbent Porapack Q. The second method permits one to predict RIs of products of organic reactions A + B → C +… with the correlation ΔRI = a ΔE + b (a < 0,|ρ| > 0.9), where ΔRI = RI_C– RI_A– RI_B and ΔE = E_C– E_A– E_B– are the differences in the internal molecular energies of reagents and products of organic reactions which are estimated by molecular dynamics methods. In the final section new possibilities of the use of RIs in reversed phase HPLC, namely for the determination of the number of hydroxyl groups in phenols, are illustrated.     

Chemical bonding and molecular dynamics in inclusion compounds of fluorinated graphite according to 19F NMR spectroscopy data

In Inclusion compounds of fluorinated graphite with chlorine trifluoride C₂. xClF₃ and hexafluoro-benzene C₂F. xC₆F₆ , the guest molecules are characterized by rotational mobility and weak bonds with the host matrix. ¹⁹F NMR chemical shift tensors are determined for the fluorine nuclei of the matrix and the guest molecules, including the structurally nonequivalent fluorine atoms ofClFj molecules [δ (Fl) = −700, δ(F1) = −280; δ|| (F2) = −440, δ±(F₂) = −220ppm relative to F2]. It is shown that C-F bonds in the host matrix are close to those in aromatic fluorocarbons. Translated from Zhumal Stmktumoi Khimii, Vol. 41, No. 1, pp. 80-85, January–February, 2000.     

Crystal and molecular structures of Ni[(iso-C4H9)2PS2]2 and Pd[(iso-C4H9)2PS2]2 chelates

Crystal structures of chelate compounds Ni[(iso-C₄H₉)₂PS₂]₂ (I) and Pd[(iso-C₄H₉)₂PS₂]₂ (II) have been determined by X-ray diffraction: diffractometer X8-APEX, MoK _α∔ -radiation, 1048 F _hkl , R = 0.0544 for I and CAD-4 diffractometer, MoK _α∔ -radiation, 1283 F _hkl , R = 0.0347 for II. The crystals are rhombic: a = 12.921(5) Å, b = 17.094(5) Å, c = 22.971(5) Å; V = 5074(3) ų, Z = 8, calc = 1.250 g/cm³, space group Pbca for I and a = 13.312(3) Å, b = 16.130(7) Å, c = 23.171(5) Å; V = 4975(3) ų, Z = 8, ρ_calc = 1. 208 g/cm³, space group Pbca for II. The structures of I and II are formed by discrete mononuclear molecules. Coordination cores MS₄ (M = Ni, Pd) approach planar square configurations. Original Russian Text Copyright ? 2005 by L. A. Glinskaya, T. G. Leonova, T. E. Kokina, R. F. Klevtsova, and S. V. Larionov __________ Translated from Zhurnal Strukturnoi Khimii, Vol. 46, No. 4, pp. 715–720, July–August, 2005.     

Molecular and crystal structure of methyl-4-anti-hydroxyimino-1-dioxolano-13-isopropyl-10a,7-dimethylpentacyclo×[10b.8.5.04b,10b.06a,10a.01a,4a]icos-14-ene-7-carboxylate

Synthesis is performed and the molecular structure is analyzed of methyl-4-anti-hydroxyimino-1-dioxolano-13-isopropyl-10a,7-dimethylpentacyclo[10b.8.5.0^4b,10b.0^6a,10a.0^1a,4a]icos-14-ene-7-carboxylate IIa. Compound IIa C₂₇H₄₀O₄ crystallizes in monoclinic symmetry with cell parameters: a = 13.785(13) ?, b = 7.302(7) ?, c = 13.817(13) ?, β = 94.799(19)°, space group P2(1), Z = 2, d = 1.164 g/cm³. Original Russian Text Copyright ? 2009 by I. E. Smirnova, E. V. Tret’yakova, O. B. Kazakova, and Z. A. Starikova __________ Translated from Zhurnal Strukturnoi Khimii, Vol. 50, No. 2, pp. 393–395, March–April, 2009.     

Synthesis, structure, and 13C and 31P CP/MAS NMR of crystalline modifications of the polynuclear thallium(I) O,O′-dicyclohexyl phosphorodithioate complex [Tl{S2P(O-cyclo-C6H11)2}]n

Two crystalline modifications (Ia and Ib) of the polynuclear thallium (I) O,O′-dicyclohexyl phosphorodithioate complex [Tl{S₂P(O-cyclo-C₆H₁₁)₂}] _n have been synthesized and characterized by CP/MAS NMR (¹³C, ³¹P). From full ³¹P CP/MAS NMR spectra, the χ² plots were constructed to calculate the ³¹P chemical shift anisotropy ³¹P − δ_aniso = (δ_zz − δ_iso) and asymmetry parameters η = (δ _yy − δ _xx )/(δ _zz − δ_iso). The data obtained for the O,O′-dicyclohexyl phosphorodithioate (Dtph) groups (in both modifications) are evidence that the ³¹P chemical shift tensors are intermediate between rhombic and axially symmetric. However, whereas the rhombic component dominates for Ia, the tensor for Ib is close to axially symmetric (for δ _zz < δ _yy ≈ δ _xx ). The same pattern of the MAS spectra corresponding to negative δ_aniso (δ _zz < δ _yy < δ _xx ) points to a bridging or terminal/bridging coordination mode of the Dtph groups. X-ray crystallography shows that complex Ib has a polynuclear structure (of the chain polymer type). The chains are composed of alternating structurally nonequivalent noncentrosymmetric binuclear molecules [Tl₂{S₂P(O-cyclo-C₆H₁₁)₂}₂]. All Dtph ligands have the terminal/μ₃-bridging coordination mode.     

IR and electronic spectra of complex Co<Superscript>2+</Superscript> groups in chloride-fluoride and carbonate-chloride melts

The IR and electronic absorption spectra of molten mixtures in the NaCl-CsCl-NaF-CoCl₂, NaCl-KCl-NaF-CoCl₂, and NaCl-KCl-NaKCO₃-CoCl₂ systems have been studied. The spectral data show that, for all molten mixtures, the composition ranges exist in which chloro fluoro Co(Cl _n F _m )(n + m = 4–6) and carbonato chloro CoCl(CO₃)_{4 − n} (n = 1–3) complex groups are formed at δ₁ < δ₁^* and δ₂ < δ₂^* (δ₁^* = F/Co and δ₂^* = CO₃/Co). At δ₁ ≥ δ₁^* and δ₂ ≥ δ₂^*, the mixtures contain complexes homoligand Co and CoF₆⁴⁻ and Co(CO₃)₄⁶⁻.     

Supramolecular interactions and structural transformations in the metal-organic sorbent-acetone nanoreactor system

By the ¹H NMR and Raman spectroscopy data it is shown that in the porous inclusion compound of Zn₂(C₈H₄O₄)₂[(N₂(CH₂)₆))]·n(CH₃)₂CO (n ≈ 0–4.7) acetone molecules exist in two structural forms: ketonic (CH₃)₂CO, for which the ¹H NMR chemical shift value is δ^ket = 0.8 ppm, and enolic CH₃C(O)=CH₂, for which δ^en(OH) = 11 ppm, δ^en(CH₂) = 8.9 ppm, and δ^en(CH₃) = 1.6 ppm are found, the average value over three proton sites being <δ^en> = 5.6 ppm. A sharp difference in chemical shift values for the keto and enol forms of acetone in the inclusion compounds can be assigned to the effect of structural chemical conditions in two types of adsorption centers.     

Quantum chemical analysis of the structure and spectroscopic properties of aryl vinyl ethers

A series of aromatic vinyl ethers and some compounds close to them in structure are studied by DFT (B3LYP/6-311+G(2d,p)) and MP2(full)/6-311+G(2d,p) methods. Measurements of Raman spectra are also used. The calculation of vibrational spectra of aryl vinyl ether (AVE) isomers shows that stretching vibrations ν(C=C) are most conformation sensitive. The calculated value of I(C=C) for vinyl phenyl ether more than twice exceeds the corresponding value for vinyl methyl ether. The calculated and experimental values of I(C=C) are consistent with the hypothesis about the presence of a common conjugated π-system in the molecules of substituted AVEs. Here the bridging oxygen atom provides the π,p,π-interaction.     

Identification by GC—MS of cymene isomers and 3,7,7-trimethylcyclohepta-1,3,5-triene in essential oils

Retention indices of cymene isomers published in popular GC—MS atlases were found to be erroneous by analyzing synthetic samples. The following retention indices (RI) were found using a nonpolar phase (diphenyl: dimethylpolysiloxane, 5:95) for four essential-oil components with indistinguishable mass spectra: 3,7,7-trimethylcyclohepta-1,3,5-triene (RI = 970), m-cymene (RI = 1022), p-cymene (RI = 1024), and o-cymene (RI = 1039). The relative distributions of these compounds were evaluated based on the analysis of about 1000 essential oils. Simple methods were given for preparing standard mixtures of isomeric compounds for identification by GC—MS. __________ Translated from Khimiya Prirodnykh Soedinenii, No. 6, pp. 569–571, November–December, 2006.     

Gas-chromatographic method of evaluation ofn-alkanol ability for self-association in pure liquid

The values of the gas-chromatographic indicator reflecting the capacity of analytes for self-association in pure liquids, δT _b.p., were estimated for C₁–C₉ and C₁₁ n-alkanols by capillary gas chromatography on a nonpolar stationary phase under isothermal conditions. The δT _b.p. values ofn-alkanols, found as the difference between the boiling points measured directly and those calculated from GC data, are correlated with thermodynamic characteristics of the formation ofn-alkanol associates in pure liquids. Usingn-alkanols as analytes with insignificant temperature increments of the retention indices, it was shown that the δT _b.p. values can be determined under conditions used in gas chromatography with temperature programming. In this way a single chromatographic run can be used to compare the capacities for self-association of analytes boiling over a wide temperature range. The C₂–C₉ n-alkanethiols, which are not associated in neat liquids, have negative δT _b.p. values. An interpretation of this finding is proposed. Translated fromIzvestiya Akademii Nauk, Seriya Khimicheskaya, No. 2, pp. 315–318 February, 2000.