Acid dissociation constants of uridine-5′-diphosphate compounds determined by phosphorus nuclear magnetic resonance spectroscopy and internal pH referencing

The acid dissociation constant (pK_a) of small, biological molecules is an important physical property used for investigating enzyme mechanisms and inhibitor design. For phosphorus-containing molecules, the ³¹P nuclear magnetic resonance (NMR) chemical shift is sensitive to the local chemical environment, particularly to changes in the electronic state of the molecule. Taking advantage of this property, we present a ³¹P NMR approach that uses inorganic phosphate buffer as an internal pH reference to determine the pK_a values of the imide and second diphosphate of uridine-5′-diphosphate compounds, including the first reported values for UDP-GlcNAc and UDP-S-GlcNAc. New methods for using inorganic phosphate buffer as an internal pH reference, involving mathematical correction factors and careful control of the chemical shift reference sample, are illustrated. A comparison of the newly determined imide and diphosphate pK_a values of UDP, UDP-GlcNAc, and UDP-S-GlcNAc with other nucleotide phosphate and thio-analogs reveals the significance of the monosaccharide and sulfur position on the pK_a values.     

Synthesis, structure and magnetic properties of the S=1/2, one-dimensional antiferromagnet, Y5Re2O12

Single crystals of Y₅Re₂O₁₂ have been grown, and the crystal structure has been determined by X-ray diffraction. This compound crystallizes in space group C2/m with cell dimensions of a=12.4081(10) Å b=5.6604(5)Å, c=7.4951(6) Å, β=107.837(3)°, Z=2. The final refinement led to R1=0.0238, WR2=0.0459 for 1053 observed reflections with F>4σ(F₀). Edge-sharing ReO₆ octahedra form infinite linear [ReO₂O_4/2]_n chains along the b direction with alternating short and long Re-Re distances. Three crystallographically independent yttrium atoms surround O2 to form OY₄ tetrahedra, which share edges and corners in the ab plane to form a two-dimensional Y₅O₄ network which separates the [ReO₂O_4/2]_n magnetic chains. This compound is therefore isostructural with the series Ln₅Re₂O₁₂Ln=Gd-Lu, which have been known since 1969. The average Re oxidation state is +4.5 in the chains and a reasonable, if qualitative MO scheme results in one unpaired electron per Re dimer. Consistent with this, magnetic susceptibility data can be fitted to the one-dimensional antiferromagnetic Heisenberg model with S=1/2 and parameters J^intra/k=−89(1)K, g=2.15(4) and χ(TIP)=5(1)×10⁻⁴ emu/mol. There is no sign of long-range magnetic order down to 2 K. These results are contrasted with those for the isostructural Y₅Mo₂O₁₂.     

Subsolidus phase relations and crystal structures of R-Ca-Cu-O (R=Nd, Sm, Gd, Tm) systems

The subsolidus phase relations of R₂O₃-CaO-CuO ternary systems (R=Nd, Sm, Gd, Tm) have been investigated by X-ray powder diffraction. All samples were synthesized at about 950° in air. There exists a ternary compound Ca_14−xR_xCu₂₄O₄₁ (x = 4 for R=Nd, Gd and x = 5 for R = Sm) and a ternary solid solution Ca_2+xR_2−xCu₅O₁₀ (R=Nd, Sm, Gd, Tm) with a wide composition range Δx of about 0.6. The compound Ca_14−xR_xCu₂₄O₄₁ possesses a layered orthorhombic structure and is isostructural to Sr_14−xCa_xCu₂₄O₄₁. The lattice parameters a and c of the compound are basically independent of the ionic radius of R, while the lattice parameter b and unit-cell volume V decrease substantially with the decrease of the ionic radii of R. The Ca_2+xR_2−xCu₅O₁₀ solid solution is isostructural to Ca_2+xY_2−xCu₅O₁₀, the structure of which is based on an orthorhombic “NaCuO₂-type” subcell containing infinite one-dimensional chains of edge-shared square planar cuprate groups crosslinked by the layered cations Ca and R that locate in the inter-chain tunnels.     

Cl/Cl isotope effects in Rh NMR of [RhCln(H2O)6−n] complex anions in hydrochloric acid solution as a unique ‘NMR finger-print’ for unambiguous speciation

A detailed analysis of the ³⁵Cl/³⁷Cl isotope effects observed in the 19.11 MHz ¹⁰³Rh NMR resonances of [RhCl_n(H₂O)_6−n]³⁻ⁿ complexes (n = 3–6) in acidic solution at 292.1 K, shows that the ‘fine structure’ of each ¹⁰³Rh resonance can be understood in terms of the unique isotopologue and in certain instances the isotopomer distribution in each complex. These ³⁵Cl/³⁷Cl isotope effects in the ¹⁰³Rh NMR resonance of the [Rh^35/37Cl₆]³⁻ species manifest only as a result of the statistically expected ³⁵Cl/³⁷Cl isotopologues, whereas for the aquated species such as for example [Rh^35/37Cl₅(H₂O)]²⁻, cis-[Rh^35/37Cl₄(H₂O)₂]⁻ as well as the mer-[Rh^35/37Cl₃(H₂O)₃] complexes, additional fine-structure due to the various possible isotopomers within each class of isotopologues, is visible. Of interest is the possibility of the direct identification of stereoisomers cis-[RhCl₄(H₂O)₂]⁻, trans-[RhCl₄(H₂O)₂]⁻, fac-[RhCl₃(H₂O)₃] and mer-[RhCl₃(H₂O)₃] based on the ¹⁰³Rh NMR line shape, other than on the basis of their very similar δ(¹⁰³Rh) chemical shift. The ¹⁰³Rh NMR resonance structure thus serves as a novel and unique ‘NMR-fingerprint’ leading to the unambiguous assignment of [RhCl_n(H₂O)_6−n]³⁻ⁿ complexes (n = 3–6), without reliance on accurate δ(¹⁰³Rh) chemical shifts.     

Synthesis, vacuum ultraviolet and near ultraviolet-excited luminescent properties of GdCaAl3O7: RE (RE=Eu, Tb)

Vacuum ultraviolet (VUV) excitation and photoluminescent (PL) properties of Eu³⁺ and Tb³⁺ ion-doped aluminate phosphors, GdCaAl₃O₇:Eu³⁺ and GdCaAl₃O₇:Tb³⁺ have been investigated. X-ray diffraction (XRD) patterns indicate that the phosphor GdCaAl₃O₇ forms without impurity phase at 900 °C. Field emission scanning electron microscopy (FE-SEM) images show that the particle size of the phosphor is less than 3 μm. Upon excitation with VUV irradiation, the phosphors show a strong emission at around 619 nm corresponding to the forced electric dipole ⁵D₀→⁷F₂ transition of Eu³⁺, and at around 545 nm corresponding to the ⁵D₄→⁷F₅ transition of Tb³⁺. The results reveal that both GdCaAl₃O₇:RE³⁺ (RE=Eu, Tb) are potential candidates as red and green phosphors, respectively, for use in plasma display panel (PDP).     

Hydrolysis of ammonium oxofluorotungstates: A F, O and W NMR study

Fluorine-19 and natural abundance ¹⁷O and ¹⁸³W NMR spectroscopy were employed for the characterization of aqueous solutions of (NH₄)₂WO₂F₄ and (NH₄)₃WO₃F₃. Dissolution of the (NH₄)₂WO₂F₄ complex is accompanied by its partial acid hydrolysis to give the trans(mer)-dimer, [W₂O₅F₆]⁴⁻, and unreacted cis-[WO₂F₄]²⁻. The cis(fac)-[W₂O₅F₆]⁴⁻ anion is the major soluble product resulting from the alkaline hydrolysis of (NH₄)₂WO₂F₄ along with the isolation of the solid (NH₄)₂WO₃F₂. In addition, the edge-bridging dimer, [W₂O₆F₄]⁴⁻, and the cyclic trimer, [W₃O₉F₆]⁶⁻, are also suggested as hydrolysis products. Decomposition of (NH₄)₃WO₃F₃ occurs in aqueous solution to give NH₄WO₃F.     

The first quaternary lanthanide(III) nitride iodides: NaM4N2I7 (M=La-Nd)

In attempts to synthesize lanthanide(III) nitride iodides with the formula M₂NI₃ (M=La-Nd), moisture-sensitive single crystals of the first quaternary sodium lanthanide(III) nitride iodides NaM₄N₂I₇ (orthorhombic, Pna2₁; Z=4; a=1391-1401, b=1086-1094, c=1186-1211 pm) could be obtained. The dominating structural features are chains of trans-edge linked [NM₄]⁹⁺ tetrahedra, which run parallel to the polar 2₁-axis [001]. Between the chains, direct bonding via special iodide anions generates cages, in which isolated [NaI₆]^5- octahedra are embedded. The IR spectrum of NaLa₄N₂I₇ recorded from 100 to 1000 cm^-1 shows main bands at υ=337, 373 and 489 cm^-1. With decreasing radii of the lanthanide trications these bands, which can be assigned as an influence of the vibrations of the condensed [NM₄]⁹⁺ tetrahedra, are shifted toward higher frequencies for the NaM₄N₂I₇ series (M=La-Nd), following the lanthanide contraction.     

Luminescence of NaGdFPO4:Ln after VUV excitation: A comparison with GdPO4:Ln (Ln=Ce, Tb)

The phosphors NaGdFPO₄:Ln³⁺ and GdPO₄:Ln³⁺ (for Ln³⁺=Ce³⁺ and Tb³⁺) were prepared by solid-state reaction technique, the VUV-vis spectroscopic properties of the phosphors were investigated, and we vividly compare the luminescence of Ce³⁺ and Tb³⁺ in the hosts. For phosphors GdPO₄:Ln³⁺, the band near 155 nm in VUV excitation spectrum is assumed to be the host-related absorption, and for NaGdFPO₄:Ln³⁺ the absorption is moved to longer wavelength, near 170 nm, showing the P-O bond covalency increased after fluoridation. The f-d transitions of Ce³⁺ and Tb³⁺ in the host lattices are assigned and corroborated, and it was found that the 5d states are with lower energy in NaGdFPO₄:Ln³⁺ than those in GdPO₄:Ln³⁺. For fluoridation of GdPO₄:Ln³⁺ to NaGdFPO₄:Ln³⁺, the energy change of Ln³⁺ (Ln=Ce, Tb) 5d states is consistent with that of host-related absorption.     

Mononuclear hydridocarbonyl ruthenium complexes incorporating N2O2 bis-chelating ligands

The reactions of [RuH(CO)Cl(PPh₃)₃] with N,N^′-bis(salicylidine)-hydrazine (H₂bsh) and N,N^′-bis(salicylidine)-p-phenylene diammine (H₂bsp) in presence of KOH in methanol led in the formation of neutral mononuclear complexes with the formulations [RuH(CO)(PPh₃)₂(L)] (LHbsh or Hbsp). These present the first examples where the ligands H₂bsh or H₂bsp provide only two of its available donor sites for interaction with the metal centre. The complexes have been characterized by elemental analyses, FAB-MS, IR, ¹H, ¹³C, ³¹P NMR and electronic spectral studies. Molecular structure of the representative complex [RuH(CO)(PPh₃)₂(Hbsh)] have been determined by single crystal X-ray analysis.     

Electrochemical immobilization of Cs in single-crystalline SYNROC

The development of a disposal technique for the radiotoxic ¹³⁷Cs in nuclear wastes is one of the most urgent issues in nuclear fuel technology. An effective disposal method of ¹³⁷Cs is to immobilize it in a synthetic rock (SYNROC) material: cesium titanate hollandite, ¹³⁷Cs_xTi₈O₁₆ (I4/m, , ). Practical applications of ¹³⁷Cs_xTi₈O₁₆ have been restricted so far because the conventional synthetic method requires strong chemical reducers and reaction temperatures higher than 1250 °C. In this report, we present a milder preparation method of Cs_xTi₈O₁₆ by electrolysis of a mixture of Cs₂MoO₄ and TiO₂ in ambient atmosphere at 900 °C. The Cs content in the resultant single-crystalline Cs_1.35Ti₈O₁₆ is competitive with the highest value in polycrystalline Cs_1.36±0.03Ti₈O₁₆ prepared by the conventional synthetic method. The electrochemical preparation of Cs_1.35Ti₈O₁₆ is a promising way to immobilize a high quantity of ¹³⁷Cs ions in a stable form of single-crystalline SYNROC.     

Specific F binding to phenyl ring of aromatic polymers

Most of the hydrogels deswell more remarkably in F⁻ containing solutions than in other monovalent anion containing solutions. However, significant deswelling followed by abnormal reswelling of polymer gel in KF solutions with increasing F⁻ concentration was observed in a series of polymer gels consisted of phenyl rings, for instance, poly(styrene sulfonic acid) (PSSA), hydroxypropyl methylcellulose phthalate (HPMCP) and poly(4-vinyl phenol) (P4VPh) gel. Driving force of this phenomenon was studied to reveal the specific interactions involved in the aqueous systems of aromatic polymers. Elemental analysis and XPS results suggest that F⁻ is embedded to the gel by the physical adsorption of KF, as well as the interactions between phenyl ring and F⁻. Further theoretical calculations revealed that the interaction may be (phenyl)CH?F⁻(H₂O)_n interaction, which is stronger than (phenyl)CH?(H₂O)_n hydrogen bond. This kind of interaction decreases with the increasing water number and it is invalid when the surrounding water number is more than 5 for the phenol-F⁻(H₂O)_n system. Therefore, we conclude that F⁻ could bind to phenyl ring via such (phenyl)CH?F⁻(H₂O)_n interaction in solutions with low hydrophilicity. The strong polarization effect of F⁻ and (phenyl)CH?F⁻(H₂O)_n interaction are two important driving forces for the reswelling of gels.     

Thermodynamic investigations on derivatives of pyrimidine nucleic acid bases: Joint use of calorimetric, volumetric and structural data for the description of properties of pyrimidine nucleic acid bases and their derivatives

The experimental enthalpies of solution Δ_solH_m^∞, van’t Hoff enthalpies of sublimation Δ_s^gH_m⁰ of solid compounds, partial molar volumes V₂⁰, and partial molar heat capacities C_p,2⁰ of aqueous solutions of pyrimidine nucleic acid bases and their derivatives, determined previously and collected here, are discussed in terms of calculated structural parameters. Relations have been established between the calorimetric and volumetric properties. Correlations have been developed to relate both the enthalpies of solvation and the partial molar heat capacities to the polar and apolar parts of the accessible molecular surface areas.     

Study on antimony oxide self-assembled inside HZSM-5

Sb/ZSM-5 was obtained by solid-state reaction with the mixture of Sb₂O₃ and zeolite HZSM-5 under a dry nitrogen flow at 773 K. Characterization of the treated zeolite was undertaken with XRD, ²⁷Al MAS NMR, BET, TGA and FT-IR. The results revealed that part of the antimony oxides migrated into the channels of zeolite, and decreased the Brönsted acid sites in Sb/ZSM-5 remarkably. The other part of antimony oxides together with the amorphous alumino-silicate in the products distributed on the external surface of zeolite ZSM-5 and modified it, while the framework of ZSM-5 in crystal phase was retained. The structure of occluded antimony oxide inside the channels of ZSM-5 was studied by XRD Rietveld method. The result showed that their structure can be described as a chain of non-perfect [Sb₅O₅(H₂O)₂]_n⁵ⁿ⁺, which is parallel to the straight channel of ZSM-5. There is about 0.6 [Sb₅O₅(H₂O)₂]⁵⁺ unit in every cell of the ZSM-5 on an average.     

Syntheses, crystal structures and Raman spectra of Ba(BF4)(PF6), Ba(BF4)(AsF6) and Ba2(BF4)2(AsF6)(H3F4); the first examples of metal salts containing simultaneously tetrahedral BF4 and octahedral AF6 anions

In the system BaF₂/BF₃/PF₅/anhydrous hydrogen fluoride (aHF) a compound Ba(BF₄)(PF₆) was isolated and characterized by Raman spectroscopy and X-ray diffraction on the single crystal. Ba(BF₄)(PF₆) crystallizes in a hexagonal space group with a=10.2251(4) Å, c=6.1535(4) Å, V=557.17(5) Å³ at 200 K, and Z=3. Both crystallographically independent Ba atoms possess coordination polyhedra in the shape of tri-capped trigonal prisms, which include F atoms from BF₄⁻ and PF₆⁻ anions. In the analogous system with AsF₅ instead of PF₅ the compound Ba(BF₄)(AsF₆) was isolated and characterized. It crystallizes in an orthorhombic Pnma space group with a=10.415(2) Å, b=6.325(3) Å, c=11.8297(17) Å, V=779.3(4) Å³ at 200 K, and Z=4. The coordination around Ba atom is in the shape of slightly distorted tri-capped trigonal prism which includes five F atoms from AsF₆⁻ and four F atoms from BF₄⁻ anions. When the system BaF₂/BF₃/AsF₅/aHF is made basic with an extra addition of BaF₂, the compound Ba₂(BF₄)₂(AsF₆)(H₃F₄) was obtained. It crystallizes in a hexagonal P6₃/mmc space group with a=6.8709(9) Å, c=17.327(8) Å, V=708.4(4) Å³ at 200 K, and Z=2. The barium environment in the shape of tetra-capped distorted trigonal prism involves 10 F atoms from four BF₄⁻, three AsF₆⁻ and three H₃F₄⁻ anions. All F atoms, except the central atom in H₃F₄ moiety, act as μ₂-bridges yielding a complex 3-D structural network.     

Enzyme mimics of spinel-type CoxNi1−xFe2O4 magnetic nanomaterial for eletroctrocatalytic oxidation of hydrogen peroxide

A series of spinel-type Co_xNi_1−xFe₂O₄ (x = 0, 0.2, 0.4, 0.5, 0.6, 0.8, 1.0) magnetic nanomaterials were solvothermally synthesized as enzyme mimics for the eletroctrocatalytic oxidation of H₂O₂. X-ray diffraction and scanning electron microscope were employed to characterize the composition, structure and morphology of the material. The electrochemical properties of spinel-type Co_xNi_1−xFe₂O₄ with different (Co/Ni) molar ratio toward H₂O₂ oxidation were investigated, and the results demonstrated that Co_0.5Ni_0.5Fe₂O₄ modified carbon paste electrode (Co_0.5Ni_0.5Fe₂O₄/CPE) possessed the best electrocatalytic activity for H₂O₂ oxidation. Under optimum conditions, the calibration curve for H₂O₂ determination on Co_0.5Ni_0.5Fe₂O₄/CPE was linear in a wide range of 1.0 × 10⁻⁸–1.0 × 10⁻³ M with low detection limit of 3.0 × 10⁻⁹ M (S/N = 3). The proposed Co_0.5Ni_0.5Fe₂O₄/CPE was also applied to the determination of H₂O₂ in commercial toothpastes with satisfactory results, indicating that Co_xNi_1−xFe₂O₄ is a promising hydrogen peroxidase mimics for the detection of H₂O₂.     

Synthesis and properties of the Co7Se8−xSx and Ni7Se8−xSx solid solutions

We report the synthesis and elementary properties of the Co₇Se_8−xS_x (x=0-8) and Ni₇Se_8−xS_x (x=0-7) solid solutions. Both systems form a NiAs-type structure with metal vacancies. In general, the lattice parameters decrease with increasing x, but in the Ni₇Se_8−xS_x system c increases on going from x=5 to 7. Magnetic susceptibility measurements show that all samples exhibit temperature-independent paramagnetism from 25-250 K. Samples within the Co₇Se_8−xS_x system, as well as Ni₇Se₈ and Ni₇SeS₇, were found to be poor metals with resistivities of ∼0.20 and ∼0.06 mΩ cm at 300 K, respectively. The Sommerfeld constant (γ) was determined from specific heat measurements to be ∼13 mJ/mol_CoK² and ∼7 mJ/mol_NiK² for Co₇Se_8−xS_x and Ni₇Se_8−xS_x, respectively.     

Synthesis and characterization of n=5, 6 members of the La4Srn−4TinO3n+2 series with layered structure based upon perovskite

Layered compounds have been synthesized and structurally characterized for the n=5 and 6 members of the perovskite-related family La₄Sr_n−4Ti_nO_3n+2 by combining X-ray diffraction and transmission electron microscopy. Their structure can be regarded as comprising [(La,Sr)₅Ti₅O₁₇] and [(La,Sr)₆Ti₆O₂₀] perovskite blocks joined by crystallographic shears along the a-axis, with consecutive blocks shifted by 1/2 [100]_p. The n=5 member is similar to the previously reported n=5 member of other A_nB_nO_3n+2-related series. The n=6 member, which has only been briefly reported in other systems previously, is also a well-behaved member of this A_nB_nO_3n+2 series.     

Host-Guest Interactions between Calixarenes and Cp(2)NbCl(2)

The possible inclusion complexes of Cp₂NbCl₂ into calixarenes hosts have been investigated. The existence of a true inclusion complex in the solid state was confirmed by a combination of NMR, ab-initio calculations, thermogravimetric analysis, FTIR, Raman and PXRD. Ab-initio calculations, ¹H NMR solution and solid state ¹³C CP-MAS NMR results demonstrated that p-sulfonic calix[6]arene does form an inclusion complex with Cp₂NbCl₂. Raman spectroscopy showed, for the inclusion compound of p-sulfonic calix[6]arene-Cp₂NbCl₂, a band between 500 and 850 cm⁻¹ characteristic of Nb-O vibration. This result suggests that Nb(V) may engage in coordination with the oxygen of the sulfonate group, as part of the host-guest interaction. However, it is important to mention that the niobocene dichloride (Cp₂NbCl₂) dissolves in water and undergoes oxidation and hydrolysis processes to yield Cp₂NbCl₂(OH) species. For that reason this band does not exclude that the Nb-O band belongs to Cp₂NbCl₂(OH). Solid State ¹³C CP-MAS NMR and solution ¹H NMR spectroscopies together with ab-initio results showed that Cp₂NbCl₂ is included in the p-sulfonic calix[6]arene cavity, with both Cp rings inside the cavity. In contrast, the solution ¹H NMR results demonstrated that calix[6]arene does not form inclusion complex with Cp₂NbCl₂ in CDCl₃ solution. Cp₂NbCl₂ is not included in the calix[6]arene cavity, possibly due to the lack of sulfonate heads which promote Nb-O interactions and assist the inclusion of Cp₂NbCl₂ into the cavity.     

Structural, spectroscopic and photoluminescence studies of LiEu(WO4)2−x(MoO4)x as a near-UV convertible phosphor

A series of lithium europium double tungsto-molybdate phosphors LiEu(WO₄)_2−x(MoO₄)_x (x=0, 0.4, 0.8, 1.2, 1.6, 2.0) have been synthesized by solid-state reactions and their crystal structure, optical and luminescent properties were studied. As the molybdate content increases, the intensity of the ⁵D₀→⁷F₂ emission of Eu³⁺ activated at wavelength of 396 nm was found to increase and reach a maximum when the relative ratio of Mo/W is 2:0. These changes were found to be accompanied with the changes in the spectral feature, which can be attributed to the crystal field splitting of the ⁵D₀→⁷F₂ transition. As the molybdate content increases the emission intensity of the 615 nm peak also increases. The intense red-emission of the tungstomolybdate phosphors under near-UV excitation suggests them to be potential candidate for white light generation by using near-UV LEDs. In this study the effect of chemical compositions and crystal structure on the photoluminescent properties of LiEu(WO₄)_2−x(MoO₄)_x is investigated and discussed.     

Reactions of Ru(Cp) complexes with P(o-tolyl)3

Reaction of [Ru(Cp^∗)(CH₃CN)₃](PF₆) with P(o-tolyl)₃ affords [Ru(Cp^∗){(η⁶-o-tolyl)P(o-tolyl)₂}](PF₆) (4) in which the P-atom is not coordinated to the metal. The solid-state structure of 4 has been determined. A related reaction with P(p-tolyl)₃ reveals a small quantity [Ru(Cp^∗){(η⁶-p-tolyl)P(o-tolyl)₂}](PF₆), in solution, but mostly the expected bis-phosphine complex. Reaction of the Ru(IV) dication, [Ru(Cp^∗)(η³-PhCHCHCH₂)(DMF)₂](PF₆)₂, with P(o-tolyl)₃ gives a mixture of the phosphonium salt, C₆H₅CHCHCH₂P(o-tolyl)₃ (9) and the dication [Ru(Cp^∗) (η⁶-C₆H₅CHCHCH₂P(o-tolyl)₃)](PF₆)₂ (10). Salt 9 forms via attack of the P-atom on the allyl ligand. The latter product results from complexation of 9 via the phenyl group of the former allyl ligand. It would seem that the sterically demanding P(o-tolyl)₃ ligand is not readily compatible with the Ru(Cp^∗) fragment, in either the +2 or +4 oxidation state. Detailed NMR studies are reported.