One-pot carbanionic synthesis of P1,P2-diglycosyl, P1,P1,P2-triglycosyl, and P1,P1,P2,P2-tetraribosyl methylenediphosphonates

Novel lithiated carbanions derived from ethyl glycosyl- and diglycosyl methylphosphonates were used in a direct and convenient synthesis of P1,P2-diglycosyl, P1,P1,P2-triglycosyl, and P1,P1,P2,P2-tetraribosyl methylenediphosphonates involving a one-pot methylidenediphosphonylation of sugars.     

Concise Synthesis of P-Glycosyl Alkenylphosphonates and P,C-di and P,P,C tri-Glycosyl Phosphonates

A direct access to P-glycosyl-, P, P-di-glycosyl alkenylphosphonates and P, C-glycosyl phosphonates is described. The method involves the Horner reaction of an anion derived from P-monoglycosyl and P ¹, P′-diglycosyl methylenediphosphonates either on the exocyclic aldehyde group of carbohydrates or on the masked aldehydic form of the furanose hemiacetals. In this last case, the carbonyl olefination, followed by an intramolecular cyclization, leads to P,C-di and P,P,C-triglycosyl phosphonates.     

Chemistry of Several Sterically Bulky Molecules with P=P,P=C,and C≡P Bond

Several sterically protected, low-coordinate organophosphorus compounds with P=P, P=C, and C≡P bond are described in this study. Molecules such as diphosphenes, phosphaalkenes, 1-phosphaallenes, 1,3-diphosphaallenes, 3,4-diphosphinidenecyclobutenes, and phosphaalkynes are stabilized with an extremely bulky 2,4,6-tri-t-butylphenyl (Mes*) group. The synthesis, structures, physical, and chemical properties of these molecules are discussed, together with some successful applications in catalytic organic reactions.     

Struktur und Farbigkeit von P,P′-Tetra-t-butyl-und P,P′-Tetraphenyl-oxalsäurediphosphid und Derivaten

The unexpected violet colour of P,P-tetraphenyl-oxalic acid diphosphide (3) stimulated the synthesis of the following derivatives: P,P-tetra-t-butyl-oxalic acid diphosphide (2), N,P-tetraphenyl-oxalic acid amide phosphide (4) and P, -triphenyl-glyoxylic acid phosphide (5). The compounds could be prepared by the reaction of the corresponding acyl chlorides with diorganyl-(trimethylsilyl) phosphine; (organyl=t-butyl and phenyl). The electronic transitions of green-blue2 and red5 in the 450–700 nm region are discussed, also theirv C=O in the ir spectrum. These results are interpreted in connection with the molecule structures of2 and3 which have been determined by X-ray crystal structure analysis. In2 the framework P–C(O)–C(O)–P is only slightly distorted from a coplanartrans-position, in3 somewhat more. The bonds at P have the expected pyramidal arrangement. The direction of the lone pairs at the P-atoms, derived from this bond arrangement, is discussed with respect to the electronic transitions in acyl phosphides.

     

Phenylpropanoid glycosides of Pedicularis condensata,P. wilhelmsiana,and P. sibthorpii

A. L. Mndzhoyan Institute of Fine Organic Chemistry, Armenian Academy of Sciences, Erevan. Translated from Khimiya Prirodnykh Soedinenii, No. 5, pp. 723–724, September–October, 1991.     

Convenient and improved protocols for the hydrogenation of esters using Ru catalysts derived from (P,P), (P,N,N) and (P,N,O) ligands

An improved protocol where a pre-cursor, [Ru(Cl)(2)(NBD)(Py)(2)], is treated with ligands to form [RuCl(2)(bidentate ligand)(diamine)] pre-catalysts for ester hydrogenation is reported. This family of catalysts, as well as a range of ruthenium complexes of tridentate P^N^X (X = NR(2), OH) ligands have been investigated in the hydrogenation of aromatic esters. A range of aromatic esters can be hydrogenated in high yields at temperatures between 30 °C and 100 °C.     

Approaching complete peroxisome characterization by gas-phase fractionation

We examined the utility of gas-phase fractionation (GPF) in the m/z dimension to increase proteome coverage and reproducibility of peptide ion selection by direct microliquid chromatography/electrospray ionization-tandem mass spectrometry (microLC/ESI-MS/MS) analysis of the peptides produced by proteolytic digestion of unfractionated proteins from a yeast whole-cell lysate and in a peroxisomal membrane protein fraction derived from isolated yeast peroxisomes. We also investigated GPF in the relative ion intensity dimension and propose denoting the two types of GPF as GPF(m/z) and GPF(RI). Comparison of results of direct nuLC/ESI-MS/MS analysis of the unfractionated mixture of peptides from proteolysis of a yeast whole cell lysate by DD ion selection from 400-1800 m/z in triplicate and GPF(m/z) from 400-800, 800-1200 and 1200-1800 produced the following results: (i) 1.3 x more proteins were identified by GPF(m/z) for an equal amount of effort (i.e., 3 microLC/ESI-MS/MS) and (ii) proteins identified by GPF(m/z) had a lower average codon bias value. Use of GPF(RI) identified more proteins per m/z unit scanned than GPF(m/z) or triplicate analysis over a wide m/z range. After tryptic digestion of all the proteins from a discontinuous Nycodenz gradient fraction known to be enriched with yeast peroxisomal membrane proteins we detected 93% (38/41) of known peroxisomal proteins using GPF(m/z), but only 73% using a standard wide m/z range survey scan.     

Approaching chemical accuracy with quantum Monte Carlo

A quantum Monte Carlo study of the atomization energies for the G2 set of molecules is presented. Basis size dependence of diffusion Monte Carlo atomization energies is studied with a single determinant Slater-Jastrow trial wavefunction formed from Hartree-Fock orbitals. With the largest basis set, the mean absolute deviation from experimental atomization energies for the G2 set is 3.0 kcal/mol. Optimizing the orbitals within variational Monte Carlo improves the agreement between diffusion Monte Carlo and experiment, reducing the mean absolute deviation to 2.1 kcal/mol. Moving beyond a single determinant Slater-Jastrow trial wavefunction, diffusion Monte Carlo with a small complete active space Slater-Jastrow trial wavefunction results in near chemical accuracy. In this case, the mean absolute deviation from experimental atomization energies is 1.2 kcal/mol. It is shown from calculations on systems containing phosphorus that the accuracy can be further improved by employing a larger active space.     

ChemInform Abstract: Theoretical Study of the Stability of Molecular P2, P4, and P8.

Ab initio calculations for P2, P4 and P8 on the SCF level and with inclusion of valence correlation effects, except for P8.     

Ruthenium complexes with ferrocene-based P,C,P pincer ligand

First ruthenium complexes with a ferrocene-based pincer ligand were synthesized. The cyclometallation of 1,3-bis[(di-tert-butylphosphino)methyl]ferrocene with RuCl₂(DMSO)₄ in 2-methoxyethanol afforded the RuCl(CO)[{2,5-(Bu^t ₂PCH₂)₂C₅H₂}Fe(C₅H₅)](RuCl(CO) ) complex (5). Complex 5 reversibly binds CO to form the RuCl(CO)₂ complex (6). The analogous reaction in the presence of NaBAr′₄ (Ar′ = 3,5-(CF₃)₂C₆H₃) produced the cationic complex {Ru(CO)₂ }BAr′₄ (7). The structures of complexes 5 and 7 were established by single-crystal X-ray diffraction. The X-ray diffraction study revealed an agostic interaction between one of the C-H bonds of the axial (exo-oriented with respect to the ferrocene iron atom) tert-butyl group and the Ru atom in complexes 5 and 7. Dedicated to Academician G. A. Abakumov on the occasion of his 70th birthday. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 9, pp. 1695–1701, September, 2007.     

Approaching the self-consistency challenge of electrocatalysis with theory and computation

This opinion piece centers around challenges involved in developing first-principles electrochemical methods. In recent years, theory and computation have become indispensable tools to navigate the parameter space that controls the activity and stability of electrocatalytic materials and electrochemical devices. Viable methods process as input details on materials structure, composition and reaction conditions. Their output includes metrics for stability and activity, phase diagrams, as well as mechanistic insights on reaction mechanisms and pathways. The core challenge, connecting input to output, is a self-consistency problem that couples the electrode potential to variables for the electronic structure of the solid electrode, solvent properties and ion distributions in the electrolyte as well as specific properties of a boundary region in-between. We will discuss a theoretical framework and computational approaches that strive to accomplish this feat.     

Synthesis and structures of palladium P,C,P pincer complexes based on ferrocene

Russian Chemical Bulletin -     

Group 11 complexes with unsymmetrical P,S and P,Se disubstituted ferrocene ligands

The reaction of the unsymmetrical ligands 1-diphenylphosphino-1'-(phenylsulfanyl)ferrocene and 1-diphenylphosphino-1'-(phenylselenyl)ferrocene, Fc(EPh)PPh2(E = S, Se), with several group 11 metal derivatives leads to the synthesis of complexes of the type [MX{Fc(EPh)PPh2}](M = Au, X = Cl, C6F5; M = Ag, X = OTf), (OTf = trifluoromethanesulfonate), [M{Fc(EPh)PPh2}2]X (M = Au, X = ClO4; M = Ag, X = OTf), [M(PPh3){Fc(EPh)PPh2}]OTf (M = Au, Ag), [Au2{Fc(SPh)PPh2}2](ClO4)2, [Au(C6F5)2{Fc(SePh)PPh2}]ClO4, [Au(C6F5)3{Fc(EPh)PPh2}], [Au2(C6F5)6{Fc(SePh)PPh2}] or [Cu{Fc(EPh)PPh2}2]PF6(E = S, Se). In these complexes coordination depends upon the metal centre; with gold it takes place predominantly to the phosphorus atom and with silver and copper to both phosphorus and chalcogen atoms. The treatment of some of the gold complexes with other metal centres affords heterometallic derivatives that in some cases are in equilibrium with the homometallic derivatives. Several compounds have been characterized by X-ray diffraction, four pairs of homologous compounds, yet not a single pair is isotypic. In many of them a three dimensional network is formed through secondary bonds such as hydrogen bonds, Au...Cl or Au...Se interactions. The complex [Ag(OTf){Fc(SePh)PPh2}] forms one-dimensional chains through trifluoromethanesulfonate bridging ligands.     

Iridium hydride complexes with P,C,P pincer ligands based on ferrocene and ruthenocene

Russian Chemical Bulletin -     

Unified total syntheses of the inositol polyphosphates: D-I-3,5,6P3, D-I-3,4,5P3, D-I-3,4,6P3, and D-I-3,4,5,6P4 via catalytic enantioselective and site-selective phosphorylation

Synthetic routes to various inositol polyphosphates have been discovered utilizing catalytic enantioselective and site-selective phosphorylation reactions. The syntheses described herein exploit a common intermediate to gain efficient access to eight unique inositol polyphosphates.     

Generalized P,Q and G conditions

The N-Representability Problem entails characterizing the set of second order reduced states that are contractions of N-electron states of the Fermion Fock algebra. This problem is formulated in the form of finding the conditions that a positive linear functional defined on a subspace of this algebra must satisfy in order to be extended to the whole algebra. As this algebra is a w*-algebra one can utilize a theorem by Kadison that shows it is sufficient to consider the values of linear functionals on projectors contained in the subspace in order to determine whether they have positive extensions. Thus we find the form of projectors belonging to the subspace of one and two particle operators and subsequently show that the extension conditions needed in the N-Representability Problem correspond to generalized P, Q and G conditions plus the additional constraints that the functionals be dispersion free on the number operator and their values on one particle operators determined by their values on two particle operators.     

A general and efficient method for the preparation of unsymmetrical bidentate P,N and P,S ligands

A general and efficient preparation of chiral and achiral P,N and P,S ligands is described where ligands are prepared by reacting a variety of 2- or α-lithio N- or S-heterocycles and a lithiated phosphine with 1,2-cyclic sulfates.