SH···N and SH···P blue-shifting H-bonds and N···P interactions in complexes pairing HSN with amines and phosphines

Quantum calculations at the MP2/aug-cc-pVDZ level examine complexes pairing HSN with aliphatic amines and phosphines. Complexes are cyclic and contain two attractive interactions. The first is a SH···N/P H-bond in which the S-H covalent bond contracts and shifts its stretching frequency to the blue, more so for amines than for phosphines. The second interaction is different for the amines and phosphines. The amines engage in a NH···N H-bond comparable in strength to the aforementioned SH···N interaction. In contrast, the second interaction in the phosphine complexes is a direct N···P attraction without an intervening H. This interaction is due in part to opposite partial charges on the N and P atoms, as well as covalent forces generated by charge transfer effects.     

Substituent effects on CL···N, S···N, and P···N noncovalent bonds

Cl, S, and P atoms have previously been shown as capable of engaging in a noncovalent bond with the N atom on another molecule. The effects of substituents B on the former atoms on the strength of this bond are examined, and it is found that the binding energy climbs in the order B = CH(3) < NH(2) < CF(3) < OH < Cl < NO(2) < F. However, there is some variability in this pattern, particularly for the NO(2) group. The A···N bonds (A = Cl, S, P) can be quite strong, amounting to as much as 10 kcal/mol. The binding energy arises from approximately equal contributions from its induction and electrostatic components, although the former becomes more dominant for the stronger bonds. The induction energy is due in large measure to the transfer of charge from the N lone pair to a B-A σ* antibonding orbital of the electron-acceptor molecule containing Cl, S, or P. These A···N bonds typically represent the lowest-energy structure on each potential energy surface, stronger than H-bonds such as NH···F, CH···N, or SH···N.     

Comparison of P···D (D = P,N) with other noncovalent bonds in molecular aggregates

All the minima on the potential energy surfaces of homotrimers and tetramers of PH(3) are identified and analyzed as to the source of their stability. The same is done with mixed trimers in which one PH(3) molecule is replaced by either NH(3) or PFH(2). The primary noncovalent attraction in all global minima is the BP···D (D = N,P) bond which is characterized by the transfer of charge from a lone pair of the donor D to a σ? B-P antibond of the partner molecule which is turned away from D, the same force earlier identified in the pertinent dimers. Examination of secondary minima reveals the presence of other weaker forces, some of which do not occur within the dimers. Examples of the latter include PH···P, NH···P, and PH···F H-bonds, and "reverse" H-bonds in which the source of the electron density is the smaller tail lobe of the donor lone pair. The global minima are cyclic structures in all cases, and exhibit some cooperativity, albeit to a small degree. The energy spacing of the oligomers is much smaller than that in the corresponding strongly H-bonded complexes such as the water trimer.     

Die Verbindungen 2SiO2·P2O5 und 2GeO2·P2O5

Zusammenfassung Bei röntgenographischen Untersuchungen im System GeO₂-P₂O₅ wird eine Verbindung der Zusammensetzung 2 GeO₂·P₂O₅ aufgefunden. Einkristallaufnahmen ergeben eine hexagonale (trigonale) Elementarzelle mita=7,99₈ undc=24,8₆ Å. Die schon beschriebene Verbindung 2 SiO₂·P₂O₅ erweist sich als isotyp:a=7,86₂ undc=24,1₃ Å.     

Weak H-bonds. Comparisons of CH···O to NH···O in proteins and PH···N to direct P···N interactions

Whereas CH···O H-bonds are usually weaker than interpeptide NH···O H-bonds, this is not necessarily the case within proteins. The nominally weaker CH···O are surprisingly strong, comparable to, and in some cases stronger than, the NH···O H-bonds in the context of the forces that hold together the adjacent strands in protein β-sheets. The peptide NH is greatly weakened as proton donor in certain conformations of the protein backbone, particularly extended structures, and forms correspondingly weaker H-bonds. The PH group is a weak proton donor, but will form PH···N H-bonds. However, there is a stronger interaction in which P can engage, in which the P atom, not the H, directly approaches the N electron donor to establish a direct P···N interaction. This approach is stabilized by the same sort of electron transfer from the N lone pair to the P-H σ* antibond that characterizes the PH···N H-bond.     

Effects of substituents upon the P···N noncovalent interaction: the limits of its strength

Previous work has documented the ability of the P atom to form a direct attractive noncovalent interaction with a N atom, based in large measure on the charge transfer from the N lone pair into the σ* antibonding orbital of the P-H that is turned away from the N atom. As the systems studied to date include only hydrides, the present work considers how substituents affect the interaction and examines whether P···N might compete with other attractive forces such as H-bonds. It is found that the addition of electron-withdrawing substituents greatly strengthens the P···N interaction to the point where it exceeds that of the majority of H-bonds. The highest interaction energy occurs in the FH(2)P···N(CH(3))(3) complex, amounting to 11 kcal/mol. A breakdown of the individual forces involved attributes the stability of the interaction to approximately equal parts electrostatic and induction energy, with a smaller contribution from dispersion.     

A new noncovalent force: comparison of P···N interaction with hydrogen and halogen bonds

When PH(3) is paired with NH(3), the two molecules are oriented such that the P and N atoms face one another directly, without the intermediacy of a H atom. Quantum calculations indicate that this attraction is due in part to the transfer of electron density from the lone pair of the N atom to the σ(?) antibond of a P-H covalent bond. Unlike a H-bond, the pertinent hydrogen is oriented about 180° away from, instead of toward, the N, and the N lone pair overlaps with the lobe of the P-H σ(?) orbital that is closest to the P. In contrast to halogen bonds, there is no requirement of a σ-hole of positive electrostatic potential on the P atom, nor is it necessary for the two interacting atoms to be of differing potential. In fact, the two atoms can be identical, as the global minimum of the PH(3) homodimer has the same structure, characterized by a P···P attraction. Natural bond orbital analysis, energy decomposition, and visualization of total electron density shifts reveal other similarities and differences between the three sorts of molecular interaction.     

Abilities of different electron donors (D) to engage in a P···D noncovalent interaction

Previous work has documented the ability of the P atom to form a direct attractive noncovalent interaction with a N atom, based in large measure on the charge transfer from the N lone pair into the σ* antibonding orbital of the P-H that is turned away from the N atom. The present work considers whether other atoms, namely, O and S, can also participate as electron donors, and in which bonding environments. Also considered are the π-systems of multiply bonded C atoms. Unlike an earlier observation that the interaction is unaffected by the nature of the electron-acceptor atom, there is strong sensitivity to the donor. The P···D binding energy diminishes in the order D = NH(3) > H(2)CO > H(2)CS > H(2)O > H(2)S, different from the patterns observed in both H and halogen bonds. The P···D interactions are comparable to, and in some cases stronger than, the analogous H-bonds formed by HOH as proton donor. The carbon π systems form surprisingly strong P···D complexes, augmented by the back-donation from the P lone pair to the C-C π* antibond, which surpass the strengths of H-bonds, even some with HF as proton donor.     

N–H···O=P hydrogen-bonded dimers as the main structural motif of aminophosphonate diesters

Abstract  

Crystal and molecular structures of three aminophosphonate diesters, diethyl and dibutyl [α-(quinolin-3-ylamino)-N-benzyl]phosphonates (1 and 2) and dibutyl [α-anilino-(quinolin-3-yl)methyl]phosphonate (3) were reported and comparatively discussed. Characteristic structural features for these compounds are strong N–H···O=P hydrogen bonds that connect two organophosphorus molecules in cyclic centrosymmetric dimer. Phosphoryl oxygen forms additional interaction with a C–H donor from the nearby aromatic group. Dimer formation in solution was also confirmed using electrospray ionization mass spectrometry. Mass spectra of six structurally similar aminophosphonate derivatives, 1–3 along with diethyl [α-anilino-(quinolin-3-yl)methyl]phosphonate (4), diethyl and dibutyl [α-anilino-(quinolin-2-yl)methyl]phosphonates (5 and 6) were studied and dimolecular ions [2M + Na]⁺ and [2M + H]⁺ were observed.     

(Ph_3·P)_2·PdCI_2催化的丙炔氯均聚合

用(Ph_3·P)_2·PdCl_2催化丙炔氯均聚,得到褐色或黑色产物。研究了聚合条件对聚合反应的影响。聚合产物的红外光谱分析表明它是丙炔氯的均聚物。元素分析结果显示聚合物除大部分链段为-C=C- CH_2Cl外,还有部分其它链段存在。聚合物的电导率为10~(1)S·m~(-1)。TG分析表明丙炔氯聚合物较丙炔醇易受热分解。GPC测得聚合物的数均相对分子质量为1350。     

P−P Condensation and P−N/P−P Bond Metathesis: Facile Synthesis of Cationic Tri- and Tetraphosphanes

[L_C^RP((PhP)₂C₂H₄)][OTf] ( 4 a,b [OTf]) and [L_C^iPrP(PPh₂)₂][OTf] ( 5 b [OTf]) were prepared from the reaction of imidazoliumyl-substituted dipyrazolylphosphane triflate salts [L_C^RP(pyr)₂][OTf] ( 3 a,b [OTf]; a : R=Me, b =iPr; L_C^R=1,3-dialkyl-4,5-dimethylimidazol-2-yl; pyr=3,5-dimethylpyrazol-1-yl) with the secondary phosphanes PhP(H)C₂H₄P(H)Ph) and Ph₂PH. A stepwise double P−N/P−P bond metathesis to catena-tetraphosphane-2,3-diium triflate salt [(Ph₂P)₂(L_C^MeP)₂][OTf]₂ ( 7 a [OTf]₂) is observed when reacting 3 a [OTf] with diphosphane P₂Ph₄. The coordination ability of 5 b [OTf] was probed with selected coinage metal salts [Cu(CH₃CN)₄]OTf, AgOTf and AuCl(tht) (tht=tetrahydrothiophene). For AuCl(tht), the helical complex [{(Ph₂PPL_C^iPr)Au}₄][OTf]₄ ( 9 [OTf]₄) was unexpectedly formed as a result of a chloride-induced P−P bond cleavage. The weakly coordinating triflate anion enables the formation of the expected copper(I) and silver(I) complexes [( 5 b )M(CH₃CN)₃][OTf]₂ (M=Cu, Ag) ( 10 [OTf]₂, 11 [OTf]₂).     

P,S-Ligands. Complexes ofP,P,P′,P′-tetraphenylethylenediphosphine monosulfide with PdCl2

1:1 and 1:2 complexes of Ph₂P(CH₂)₂P(S)Ph₂ with PdCl₂ were synthesized. Their structures were established by³¹P NMR and IR spectroscopy and X-ray diffraction analysis. In the crystals, the 1:1 complex has a chelate structure. In CH₂Cl₂, this complex partially dissociates at the Pd-.S=P bond. According to the X-ray diffraction data, only the P^III atoms the cationic chelate complex [Pd(Ph₂P(CH₂)₂P(S)Ph₂)₂]²⁺ 2NO₃ ⁻. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 6, pp. 1122–1127, June, 2000.     

Synthesis and crystal structure of the hydrated magnesium diphosphate Mg2P2O7·3.5H2O and its high temperature variant Mg2P2O7·H2O

The synthesis and crystal structure of a novel hydrated magnesium diphosphate and its high temperature variant are described. Both structures were solved from powder X-ray diffraction data. The room temperature variant with composition Mg₂P₂O₇·3.5H₂O crystallises in the monoclinic space group P2₁/c (No. 14) with a=10.9317(1), b=8.05578(9), c=9.2774(1) Å, β=90.201(1)°, V=816.99(2) ų and Z=4. The structure consists of sheets stacked along [100] which are linked through MgO₂(H₂O)₄ pillars into a three-dimensional framework with cavities containing water molecules. Within the sheets there are infinite edge-sharing chains of Mg octahedra along [010] which are cross linked by P₂O₇⁴⁻ groups. A high temperature variant exists around 200°C. The crystal structure of this compound with composition Mg₂P₂O₇·H₂O was solved and refined in the monoclinic space group C2/c (No. 15) with a=18.6596(4), b=7.9769(1), c=8.9757(2) Å, β=107.378(1)°, V=1275.01(4) ų, Z=8. The transformation to Mg₂P₂O₇·H₂O involves removal of the water molecules in the cavities and the water molecules of the Mg octahedral pillars in Mg₂P₂O₇·3.5H₂O. The sheets in Mg₂P₂O₇·3.5H₂O however remain unchanged during the transformation as the water molecule coordinating Mg here is retained. These sheets are linked through tetrahedral MgO₄ pillars into a three-dimensional structure containing infinite 10-membered ring channels along [001]. Both compounds have been further characterised by ³¹P MAS NMR spectroscopy, thermogravimetric analysis and high temperature powder X-ray diffraction.     

Spin-adduct of the P4 ·− radical anion during the electrochemical reduction of white phosphorus

The radical anion P₄·⁻ was detected and identified by the ESR method as a spin-adduct with nitrone during the electrochemical reduction of white phosphorus in the presence of a spin trap, viz., α-phenyl-N-tert-butylnitrone, in a special electrolysis cell with a helical platinum working electrode in the potentiostatic mode. The character of the behavior of P₄·⁻ and the spin trap during electrochemical reduction was monitored by cyclic voltammetry directly in the electrolysis cell, and the spin-adduct formed was detected by ESR.     

X-ray powder structure determination of Li6P6O18·3H2O

Preparation, characterization by X-ray diffraction, IR absorption, DTA-GTA analysis and ab-initio crystal structure determination are reported for a new lithium cyclohexaphosphate hydrate Li₆P₆O₁₈·3H₂O. It crystallizes in a trigonal (rhomboedral) cell (space group R 3¯m No 166, Z = 6) with a = 15.7442(2) Å, c = 12.5486(2) Å. X-ray powder diffraction pattern data was refined by Rietveld profile technique and lead to R_Bragg = 0.09. The crystal structure of Li₆P₆O₁₈·3H₂O is built up from [P₆O₁₈]^6- ring anions, having the 3m symmetry, alternating along the 3¯ axis with rings made of six LiO₄ tetrahedra and six LiO₅ pseudo square pyramids sharing common edges.     

C-H···π interactions in the CHBrF2···HCCH weakly bound dimer

The microwave spectra of four isotopologues of the CHBrF(2)···HCCH weakly bound dimer have been measured in the 6-18 GHz region using chirped-pulse and Balle-Flygare Fourier-transform microwave spectroscopy. Spectra of (13)CH(79)BrF(2) and (13)CH(81)BrF(2) monomers have also been measured, and spectroscopic constants are reported. Measurement of spectra for the (79)Br and (81)Br isotopologues of CHBrF(2) complexed with both (12)C(2)H(2) and (13)C(2)H(2) have allowed the determination of a structure with C(s) symmetry for this complex. CHBrF(2) interacts with the triple bond of acetylene via a C-H···π contact (R(H···π) = 2.670(8) ?) with the Br atom lying in the ab plane, located 3.293(40) ? from a hydrogen atom of the HCCH molecule. The structure of CHBrF(2)···HCCH has been compared with recently studied related acetylene complexes, including a comparison with (and further structural analysis of) the CHClF(2)···HCCH complex.     

Competition between H···π and H···O interactions in furan heterodimers

Here the interactions of furan with HZ (Z = CCH, CCF, CN, Cl, and F) are studied using a variety of electron correlation methods (MP2, CCSD(T), DFT-SAPT) and correlation-consistent triple- and quadruple-ζ basis sets including complete basis set (CBS) extrapolation. For Fu-HF all methods agree that a n-type structure with a hydrogen bridge between the oxygen lone-pair of furan and the hydrogen atom of HF is the global minimum structure. It is found to be significantly more stable than a π-type structure where the hydrogen atom of HF points toward the π system of furan. For the other four dimers MP2 and DFT-SAPT predict the π-type structure to be somewhat more stable, while CCSD(T) favors the n-type structure as the global minimum for Fu-HCl and predicts both structures as nearly isoenergetic for Fu-HCCH and Fu-HCCF. From a geometrical point of view, the Fu-HCN dimer structures are more related to those of the Fu-HCl complex than to Fu-HCCH. The different behavior of HCCF and HF upon complexation with furan evidence the effect of the presence of a π system in the aggregation of fluorine derivatives. It is shown that aggregates of furan cannot be understood by means of dipole-dipole and electrostatic analysis only. Yet, through a combined and detailed analysis of DFT-SAPT energy contributions and resonance effects on the molecular charge distributions a consistent explanation of the aggregation of furan with both π electron rich molecules and halogen hydrides is provided.     

·亮点介绍·

新型离去基团:1,3-二羰基Angew.Chem.Int.Ed.2011,50,2975～2978有机合成化学中的反应(除重排反应)通常不涉及到C—C键的骨架变化.探索C—C键选择性切断及其反应规律,发展C—C键活化的新模式,成为有机合成化学中非常具有挑战性的研究课题。