Fourier-transform Raman and infrared spectroscopic analysis of dipyrrinones and mesobilirubins

The Fourier-transform Raman (FT-Raman), infrared (FT-IR), and UV-visible absorption spectra of four dipyrrinones and two mesobilirubins have been investigated in the solid state and in CH2Cl2 solutions. A detailed spectral analysis, assignment and discussion of these spectra are presented. The bands at 1735-1738, 1691-1707 and 1359-1377 cm(-1) which were assigned to the stretching vibrations of the C-O-C and C-O-H and symmetric deformation of C-H bonds, respectively, can act as a marker to distinguish the compounds of this class. The striking differences between the spectra of the compounds suggest that mesobilirubin XIIIalpha is tending to adopt as ridge-tile conformation, rather than linear conformation.     

Fourier-transform Raman and infrared spectroscopic analysis of 2-nitro-tetraphenylporphyrin and metallo-2-nitro-tetraphenylporphyrins

The Fourier-transform Raman (FT-Raman) and infrared (FT-IR) spectra of 2-nitro-tetraphenylporphyrin (2-NO(2)-TPP), nickel-2-nitro-tetraphenylporphyrin (Ni-2-NO(2)-TPP), zinc-2-nitro-tetraphenylporphyrin (Zn-2-NO(2)-TPP) and copper-2-nitro-tetraphenylporphyrin (Cu-2-NO(2)-TPP) were acquired for the first time and carefully assigned and discussed. The effects of a beta-NO(2) group and the influence of the central metal on the molecular symmetry and vibrational spectra of the porphyrin macrocycle were also examined. The bands at 1323-1339, 1516-1526 and 961-971 cm(-1) were attributed to the symmetric and asymmetric stretching vibration of the NO(2) group and to the stretching vibration of the C(beta)-N bond, respectively, which connects the NO(2) group with the beta-carbon of the porphyrin macrocycle. These bands can act as a marker to distinguish beta-NO(2) TPPs from other beta-substituent TPPs. Cu-2-NO(2)-TPP has a C(4nu) molecular symmetry, which is different from those of Ni-2-NO(2)-TPP and Zn-2-NO(2)-TPP, i.e. D(4h).     

Fourier-transform infrared spectroscopic studies of dithia tetraphenylporphine

We present here infrared absorption spectra of dithia tetraphenylporphine and its cation in the 450–1600 and 2900–3400 cm⁻¹ regions. Most of the allowed IR bands are observed in pairs due to overallD _2h point group symmetry of the molecule. The observed bands have been assigned to the porphyrin skeleton and phenyl ring modes. Some weak bands, which are forbidden underD _2h , also appear in the spectra due to the distortion of the molecule from planarity-caused by the out-of-plane positioned N and S atoms. Increased intensity of some phenyl ring bands compared to free-base tetraphenylporphine is explained on the basis of rotation of phenyl rings towards the mean molecular plane. Contrary to the point group symmetry of cation of dithia tetraphenylporphine, certain bands are observed to be degenerate due to identical bonding arrangements in pyrrole rings of the cation     

Fourier-transform Raman spectroscopic study of unsaturated and saturated waxes

The application of Fourier-transform (FT)-Raman spectroscopy to the non-destructive analysis of plant biomaterials, comprising ten different waxes, is illustrated in this work. All the wax specimens studied are multicomponent systems and comparison of the individual spectra was effected. This leads to a means of distinguishing the individual wax specimen using FT-Raman spectroscopy. The samples were not pre-treated before analysis and were used directly from their respective storage collections.     

A review of Fourier-transform Raman spectroscopic studies on polymers

The published work on the FT-Raman spectra of polymers other than elastomers is reviewed and assessed. Experimental techniques, including sampling procedures, measurements at elevated temperatures and microscope accessories are considered first, followed by the scope for quantitative measurements. The survey of published work on polymers is arranged into the subdivisions hydrocarbon polymers, polyamides and polyimides, poly(aryl ether ketone) and poly(aryl ether ether ketone) and the corresponding sulphones, halogenated polymers, highly conjugated polymers, various other polymers, polymerization kinetic studies and thin polymer films.     

Fourier-transform Raman spectroscopic study of a Neolithic waterlogged wood assemblage

The use of Fourier-transform Raman spectroscopy for characterising lignocellulosics has increased significantly over the last twenty years. Here, an FT-Raman spectroscopic study of changes in the chemistry of waterlogged archaeological wood of Pinus sp. and Quercus sp. from a prehistoric assemblage recovered from northern Greece is presented. FT-Raman spectral features of biodeteriorated wood were associated with the depletion of lignin and/or carbohydrate polymers at various stages of deterioration. Spectra from the archaeological wood are presented alongside spectra of sound wood of the same taxa. A comparison of the relative changes in intensities of spectral bands associated with lignin and carbohydrates resulting from decay clearly indicated extensive deterioration of both the softwood and hardwood samples and the carbohydrates appear to be more deteriorated than the lignin. The biodeterioration of the archaeological timbers followed a pattern of initial preferential loss of carbohydrates causing significant loss of cellulose and hemicellulose, followed by the degradation of lignin.     

Fourier-transform infrared and Raman difference spectroscopy studies of the phosphorus-containing dendrimers

FT IR and Raman spectra of 12 generations of the phosphorus-containing starburst dendrimers containing P=S and P=O bonds with terminal aldehyde and P-Cl groups were compared. The influence of the encirclement on the band frequencies and intensity is studied and due to the predictable, controlled and reproducible structure of the dendrimers the information usually inaccessible is obtained. Bands in the IR difference (G2'(P=O)-G2'(P=S)) spectra have characteristic EPR-like form. The strong band at 1600 cm(-1) show marked changes of the optical density in dependence of the aldehyde (-CH=O) or azomethyne (-CH=N-) substituents in the aromatic ring. The analysis of difference spectra enables one to assign the characteristic bands nu(P=S) and nu(P=O) for the bonds in the core, in the repeating unit and in the terminal groups of the dendrimers. This assignment is supported by the calculation of the absorption curves of the different fragments of dendrimer with the force constants and electro-optical parameters. The IR and Raman spectra of dendrimers are depended on the ratio of number terminal groups to a number of repeating units, which in its turn is strictly determined by the generation number. Thus, the marked differences in the vibrational spectra of the first successive generations aspire to zero for the higher ones. The rather rigid repeated units with little conformational flexibility define the perfect microstructure of the studied phosphorus-containing dendrimers up to the eleventh generation.     

An infrared and resonance Raman spectroscopic study of phenylazonaphthol pigments

The IR, resonance Raman (RR) and electronic spectra of two phenylazonaphthol pigments, LRC Scarlet and 4BL Red, have been measured and assignments of the vibrational and electronic spectra were facilitated by ab initio calculation s at the B3-LYP/DZ level. Vibrational spectra indicate that the major species in the solid state are the hydrazo tautomers. Electronic spectra are in accordance with the nature of the electronic transitions predicted by time-dependent B3-LYP/DZ calculations.     

An infrared and Raman spectroscopic study of the uranyl micas

Vibrational spectroscopy using a combination of infrared and Raman spectroscopy has been used to study the uranyl micas also known as the autunite minerals, of general formula M(UO2)2(XO4)2.8-12H2O where M may be Ba, Ca, Cu, Fe2+, Mg, Mn2+ or 1/2(HAl) and X is As or P. Included in these minerals are autunite, metautunite, torbernite, meta-torbernite, meta-zeunerite, saléeite and sabugalite. Compared with the results of infrared spectroscopy, Raman microscopy shows excellent band separation enabling the separation and identification of bands attributed to (UO2)2+ units, PO4 and AsO4 units. Common to all spectra were bands at around 900 and 818 cm(-1), attributed to the antisymmetric and symmetric stretching vibrations of the (UO2)2+ units. Water in autunites is in a highly structured arrangement in the interlayer of the uranyl micas. Water molecules are differentiated according to the strength of the hydrogen bonds formed between the water and the adjacent uranyl-phosphate or uranyl-arsenate surfaces and the hydration sphere of the interlayer cation.     

An infrared and Raman spectroscopic study of natural zinc phosphates

Zinc phosphates are important in the study of the phosphatisation of metals. Raman spectroscopy in combination with infrared spectroscopy has been used to characterise the zinc phosphate minerals. The minerals may be characterised by the patterns of the hydroxyl stretching vibrations in both the Raman and infrared spectra. Spencerite is characterised by a sharp Raman band at 3516 cm(-1) and tarbuttite by a single band at 3446 cm(-1). The patterns of the Raman spectra of the hydroxyl stretching region of hopeite and parahopeite are different in line with their differing crystal structures. The Raman spectrum of the PO4 stretching region shows better band separated peaks than the infrared spectra which consist of a complex set of overlapping bands. The position of the PO4 symmetric stretching mode can be used to identify the zinc phosphate mineral. It is apparent that Raman spectroscopy lends itself to the fundamental study of the evolution of zinc phosphate films.     

Fourier-transform infrared spectroscopic study of the interactions of selenium species with living bacterial cells

A study of the interactions of several selenium species with living bacterial cells was carried out by Fourier-transform infrared (FT-IR) spectroscopy. Bacterial cells consisted of an Escherichia coli strain (K-12) cultivated in a growth medium based on glucose contaminated with selenium species. Equilibrium between the analyte in the solution and the extraction medium was established, and then the effects of selenium species upon the external membrane of the living bacterial cells were characterized by performing FT-IR spectroscopy of whole cells. The presence of the toxicants at various concentrations in the culture medium had an effect on the FT-IR spectra, and the concentration of the selenium species was determined directly in the biomass by FT-IR spectroscopy. The intensity ratios between several absorption lines, which varied as a function of the concentration of the selenium species, were used as the analytical signal.Electronic Supplementary Material Supplementary material is available for this article if you access the article at . A link in the frame on the left on that page takes you directly to the supplementary material.     

Hydrated double carbonates – A Raman and infrared spectroscopic study

The Raman spectra of selected double carbonates including pirssonite, gaylussite, shortite and quintinite complemented with infrared spectra have been used to characterise the structure of these carbonate minerals. By using a Libowitzky type function hydrogen bond distances for these minerals of 2.669–2.766 Å are estimated. The variation in the hydrogen bond distances contributed to the stability of the mineral. The Raman spectrum of pirssonite shows a single band at 1080 cm⁻¹ attributed to the (CO₃)²⁻ symmetric stretching mode, in contrast to shortite and quintinite where two bands are observed. Multiple bands are observed for the antisymmetric stretching and bending region for these minerals proving that the carbonate unit is distorted in the structure of pirssonite and gaylussite.     

A Raman and infrared spectroscopic study of the phosphate mineral laueite

A laueite mineral sample from Lavra Da Ilha, Minas Gerais, Brazil has been studied by vibrational spectroscopy and scanning electron microscopy with EDX. Chemical formula calculated on the basis of semi-quantitative chemical analysis can be expressed as (Mn²⁺_0.85,Fe²⁺_0.10Mg_0.05)_∑1.00(Fe³⁺_1.90,Al_0.10)_∑2.00(PO₄)₂(OH)₂·8H₂O.The laueite structure is based on an infinite chains of vertex-linked oxygen octahedra, with Fe³⁺ occupying the octahedral centers, the chain oriented parallel to the c-axis and linked by PO₄ groups. Consequentially not all phosphate units are identical. Two intense Raman bands observed at 980 and 1045 cm⁻¹ are assigned to the ν₁ PO₄³⁻ symmetric stretching mode. Intense Raman bands are observed at 525 and 551 cm⁻¹ with a shoulder at 542 cm⁻¹ are assigned to the ν₄ out of plane bending modes of the PO₄³⁻. The observation of multiple bands supports the concept of non-equivalent phosphate units in the structure. Intense Raman bands are observed at 3379 and 3478 cm⁻¹ and are attributed to the OH stretching vibrations of the hydroxyl units. Intense broad infrared bands are observed. Vibrational spectroscopy enables subtle details of the molecular structure of laueite to be determined.     

Raman and infrared spectroscopic investigation of the cation distributions in amphiboles

Micro-Raman spectra of a series of amphiboles have allowed an analysis of the cation distributions to be made. In addition, the micro-infrared absorption spectrum of Cummingtonite, one mineral in the series, has made possible the determination of both principal and interaction OH force constants. The results are interpreted in terms of the electronegativities of the cations occupying nearby sites.     

The cytidinium—cytidine complex: infrared and Raman spectroscopic studies

Using IR and Raman spectra, it is shown that the sytidinium cation hydrogen bonds to cytidine to form a stable 1:1 complex, in both aqueous solution (pH ~ 3.3) and as a solid. The spectra indicate that the proton is located asymmetrically in the NH?N bond of the complex, on the vibrational time scale, in both solution and the solid. The perdeuterated systems were also examined; their spectra support these conclusions.     

Combined Fourier transform infrared and Raman spectroscopic studies of some carbonyl-diphosphine-indenyl-iron cations

The Fourier transform infrared and Raman spectra of the cations [η⁵-C₉H₇Fe(CO)_n dppa]⁺ (n = 1, 2; dppa=bisdiphenylphosphinoalkane, where alkane=methane, ethane, butane, hexane and octane) and [{η⁵-C₉H₇Fe(CO)₂}₂-μ-dppa]²⁺ indicate that the alkyl chain lengths have effects on the structures of the bidentate cations resulting in increased back-donation to carbonyl groups as the chain length increases. In contrast the alkyl chain lengths have no similar effects in the unidentate mononuclear and bridged cations.     

An infrared and Raman spectroscopic study of some metal pyridine tetracyanonickelate complexes

The results of an infrared and Raman spectroscopic study are presented for seven new metal pyridine tetracyanonickelate complexes, M(py)₂Ni(CN)₄, M = Mn, Co, Fe, Ni, Cu, Zn and Cd. It is shown that the spectra are consistent with a proposed crystal structure for these complexes derived from X-ray diffraction measurements. The spectra can be clearly distinguished from those of analogous Hofmann-type clathrates with which the nickel complex had been previously confused. The copper complex has spectral features different from the other six compounds and an explanation is proposed in terms of a distortion of the general crystal structure due to the Jahn-Teller effect. Analysis of the single, sharp bands of coordinated pyridine offers a method of resolving some difficulties in earlier assignments of the normal modes of the free base. Several modes of coordinated pyridine have upward shifts in frequency compared to those in the free molecule and the shifts are metal dependent. An explanation, supported by a simple normal coordinate analysis on a model, is provided in terms of coupling with low frequency vibrations, particularly the M-N stretching frequency. Other vibrations of the Ni(CN)₄ group, which coordinates to the metals M to form a two-dimensional coordination polymer, are also metal dependent. It is similarly suggested that coupling with low frequency modes is the principal cause of the upward shifts in frequency.     

Near infrared Raman spectroscopic mapping of native brain tissue and intracranial tumors

This study assessed the diagnostic potential of Raman spectroscopic mapping by evaluating its ability to distinguish between normal brain tissue and the human intracranial tumors gliomas and meningeomas. Seven Raman maps of native specimens were collected ex vivo by a Raman spectrometer with 785 nm excitation coupled to a microscope with a motorized stage. Variations within each Raman map were analyzed by cluster analysis. The dependence of tissue composition on the tissue type in cluster averaged Raman spectra was shown by linear combinations of reference spectra. Normal brain tissue was found to contain higher levels of lipids, intracranial tumors have more hemoglobin and lower lipid to protein ratios, meningeomas contain more collagen with maximum collagen content in normal meninges. One sample was studied without freezing. Whereas tumor regions did not change significantly, spectral changes were observed in the hemoglobin component after snap freezing and thawing to room temperature. The results constitute a basis for subsequent Raman studies to develop classification models for diagnosis of brain tissue.     

Pressure-tuning infrared and Raman spectroscopy of group 14 tetraphenyl compounds

The effect of high external pressures on the vibrational spectra of the tetraphenyl Group 14 compounds, Ph4M (M = Si, Ge, Sn, Pb), were examined between ambient pressure and 40 kbar with the aid of a diamond-anvil cell. The four compounds displayed similar behaviour as the pressure was increased and a structural transition at approximately 15 kbar, most probably associated with a phenyl ring rotation, was identified in each case. The pressure dependencies of selected vibrational modes were obtained.     

Fourier-transform infrared photoacoustic spectroscopy of zeolites

Photoacoustic detection is shown to be very valuable for obtaining infrared-spectroscopic data for samples with characteristics that involve very difficult sampling. The modification reactions on the zeolite mordenite, a highly scattering material, are investigated by this technique and by gas-adsorption experiments. The mechanism of the reactions between borane groups inside the channels of the mordenite and amines at different reaction temperatures is described. At low temperatures, amine- and amino-boranes are formed that polymerize at elevated temperatures if steric hindrance is absent. The implantation of boron-nitrogen compounds inside the channels of the mordenite allow a continuous and controlled variation of the accessibility of the mordenite for gas molecules such as krypton and xenon at 273 K.