Comprehensive theoretical studies on the CF3H dissociation mechanism and the reactions of CF3H with OH and H free radicals

The potential energy surfaces for the CF3H unimolecular dissociation reaction and reactions of CF3H with free radical OH and H were investigated at the B3LYP6-311++G(**) and QCISD(T)6-311++G(**) levels and by the G3B3 theory. All the possible stationary and first-order saddle points along the reaction paths were verified by the vibrational analysis. The calculations account for all the product channels. The reaction enthalpies obtained at the G3B3 level are in good agreement with the available experiments. Canonical transition-state theory with Wigner tunneling correction was used to predict the rate constants for the temperature range of 298-2500 K without any artificial adjustment, and tshe computed rate constants for elementary channels can be accurately fitted with three-parameter Arrhenius expressions. The theoretical rate constants of the CF3H+H reaction agree with the available experimental data very well. The theoretical and experimental rate constants for the CF3H+OH reaction are in reasonable agreement. The H abstraction of CF3H by OH is found to be the main reaction channel for the CF3H fire extinguishing reactions while the CF3H unimolecular dissociation reaction plays a negligible role.     

SO<Stack><Subscript>2</Subscript><Superscript>−·</Superscript></Stack> electron transfer ion/ion reactions with disulfide linked polypeptide ions

Multiply-charged peptide cations comprised of two polypeptide chains (designated A and B) bound via a disulfide linkage have been reacted with SO2-* in an electrodynamic ion trap mass spectrometer. These reactions proceed through both proton transfer (without dissociation) and electron transfer (with and without dissociation). Electron transfer reactions are shown to give rise to cleavage along the peptide backbone, loss of neutral molecules, and cleavage of the cystine bond. Disulfide bond cleavage is the preferred dissociation channel and both Chain A (or B)-S* and Chain A (or B)-SH fragment ions are observed, similar to those observed with electron capture dissociation (ECD) of disulfide-bound peptides. Electron transfer without dissociation produces [M + 2H]+* ions, which appear to be less kinetically stable than the proton transfer [M + H]+ product. When subjected to collision-induced dissociation (CID), the [M + 2H]+* ions fragment to give products that were also observed as dissociation products during the electron transfer reaction. However, not all dissociation channels noted in the electron transfer reaction were observed in the CID of the [M + 2H]+* ions. The charge state of the peptide has a significant effect on both the extent of electron transfer dissociation observed and the variety of dissociation products, with higher charge states giving more of each.     

CH_3SCH_3在Fe~+作用下的脱烷基化反应机理的理论研究

采用密度泛函理论的B3LYP方法,在6-311++G(d,p)和DGDZVP基组水平上研究了CH3SCH3在Fe+作用下的脱烷基化的四重态和六重态微观反应机理,全参数优化了反应势能面上各驻点的几何构型,振动分析和内禀反应坐标(IRC)分析结果证实了中间体和过渡态的真实性.找到了三条可能的反应通道,对结果的分析表明:对于六重态的反应体系,二甲硫醚的脱甲烷化反应主要经历了四个基本步骤,即先驱复合物、C—S活化、(-H转移和非反应性的分裂.对于四重态的Fe+/CH3SCH3反应体系,含有C—S和C—H插入反应的两个路径都可以导致脱甲烷反应的发生,其中C—S插入反应路径的能垒较低,是主要反应通道.     

铂铜合金催化甲醇电氧化的机理研究

直接甲醇燃料电池(DMFC)可以将甲醇的化学能转化为电能.甲醇在室温下是一种液体,很容易运输和低风险储存.在常用燃料中,甲醇热值较高且价格便宜,其单位价格热值甚至高于汽油.更重要的是,甲醇可以通过二氧化碳催化加氢制得.因此可以将可再生能源转化为氢气,并高效地存储在甲醇分子中.而燃料电池消耗甲醇后,产物只有二氧化碳和无污...     

Hydrogen atom transfer reactions of C2-, C4-, and C6-: bond dissociation energies of linear H-C2n- and H-C2n (n = 1, 2, 3)

The reactions of C2-, C4-, and C6- with D2O and ND3 and of C4- with CH3OH, CH4, and C2H6 have been investigated using guided ion beam tandem mass spectrometry. Hydrogen (or deuterium) atom transfer is the major product channel for each of the reactions. The reaction threshold energies for collisional activation are reported. Several of the reactions exhibit threshold energies in excess of the reaction endothermicity. Potential energy calculations using density functional theory show energy barriers for some of the reactions. Dynamic restrictions related to multiple wells along the reaction path may also contribute to elevated threshold energies. The results indicate that the reactions with D2O have the smallest excess threshold energies, which may therefore be used to derive lower limits on the C-H bond dissociation energies of the C2nH- and C2nH (n = 1-3) linear species. The experimental lower limits for the bond dissociation energies of the neutral radicals to linear products are D0(C2-H) >or= 460 +/- 15 kJ/mol, D0(C4-H) >or= 427 +/- 12 kJ/mol, and D0(C6-H) >or= 405 +/- 11 kJ/mol.     

How adiabatic is activated adsorption/associative desorption?

Using density-functional theory we calculate friction coefficients describing the damping of nuclear motion into electron-hole pair excitation for the two best-known examples of activated adsorption: H2 dissociation on a Cu(111) surface and N2 dissociation on a Ru(0001) surface. In both cases, the frictions increase dramatically along the reaction path towards the transition state and can be an order of magnitude larger there than typical in the molecularly adsorbed state. In addition, the frictions for N2/Ru(0001) are typically an order of magnitude larger than for H2/Cu(111). We rationalize these trends in terms of the electron structure as the systems proceed to dissociation along the reaction paths. Combining these friction coefficients with the potential-energy surface in quasiclassical dynamics allows first-principles studies of the importance of the breakdown in the Born-Oppenheimer approximation in describing the chemistry. We find that nonadiabatic effects are minimal for the H2/Cu(111) system, but are quite important for N2/Ru(0001).     

Pressure catalyzed bond dissociation in an anthracene cyclophane photodimer

The anthracene cyclophane bis-anthracene (BA) can undergo a [4 + 4] photocycloaddition reaction that results in a photodimer with two cyclobutane rings. We find that the subsequent dissociation of the dimer, which involves the rupture of two carbon-carbon bonds, is strongly accelerated by the application of mild pressures. The reaction kinetics of the dimer dissociation in a Zeonex (polycycloolefin) polymer matrix were measured at various pressures and temperatures. Biexponential reaction kinetics were observed for all pressures, consistent with the presence of two different isomers of bis(anthracene). One of the rates showed a strong dependence on pressure, yielding a negative activation volume for the dissociation reaction of ΔV(++) = -16 ?(3). The 93 kJ/mol activation energy for the dissociation reaction at ambient pressure is lowered by more than an order of magnitude from 93 to 7 kJ/mol with the application of modest pressure (0.9 GPa). Both observations are consistent with a transition state that is stabilized at higher pressures, and a mechanism for this is proposed in terms of a two-step process where a flattening of the anthracene rings precedes rupture of the cyclobutane rings. The ability to catalyze covalent bond breakage in isolated small molecules using compressive forces may present opportunities for the development of materials that can be activated by acoustic shock or stress.     

Theoretical study of the benzyl+O2 reaction: kinetics, mechanism, and product branching ratios

Ab initio calculations at the level of CBS-QB3 theory have been performed to investigate the potential energy surface for the reaction of benzyl radical with molecular oxygen. The reaction is shown to proceed with an exothermic barrierless addition of O2 to the benzyl radical to form benzylperoxy radical (2). The benzylperoxy radical was found to have three dissociation channels, giving benzaldehyde (4) and OH radical through the four-centered transition states (channel B), giving benzyl hydroperoxide (5) through the six-centered transition states (channel C), and giving O2-adduct (8) through the four-centered transition states (channel D), in addition to the backward reaction forming benzyl radical and O2 (channel E). The master equation analysis suggested that the rate constant for the backward reaction (E) of C6H5CH2OO-->C6H5CH2+O2 was several orders of magnitude higher that those for the product dissociation channels (B-D) for temperatures 300-1500 K and pressures 0.1-10 atm; therefore, it was also suggested that the dissociation of benzylperoxy radicals proceeded with the partial equilibrium between the benzyl+O2 and benzylperoxy radicals. The rate constants for product channels B-D were also calculated, and it was found that the rate constant for each dissociation reaction pathway was higher in the order of channel D>channel C>channel B for all temperature and pressure ranges. The rate constants for the reaction of benzyl+O2 were computed from the equilibrium constant and from the predicted rate constant for the backward reaction (E). Finally, the product branching ratios forming CH2O molecules and OH radicals formed by the reaction of benzyl+O2 were also calculated using the stationary state approximation for each reaction intermediate.     

Time-resolved imaging of the reaction coordinate

Time-resolved photoelectron imaging of negative ions is employed to study the dynamics along the reaction coordinate in the photodissociation of IBr(-). The results are discussed in a side-by-side comparison with the dissociation of I(2) (-), examined under similar experimental conditions. The I(2) (-) anion, extensively studied in the past, is used as a reference system for interpreting the IBr(-) results. The data provide rigorous dynamical tests of the anion electronic potentials. The evolution of the energetics revealed in the time-resolved (780 nm pump, 390 nm probe) I(2) (-) and IBr(-) photoelectron images is compared to the predictions of classical trajectory calculations, with the time-resolved photoelectron spectra modeled assuming a variety of neutral states accessed in the photodetachment. In light of good overall agreement of the experimental data with the theoretical predictions, the results are used to construct an experimental image of the IBr(-) dissociation potential as a function of the reaction coordinate.     

Lithium-alkyl, -aryl, and -amido ligand-exchange dynamics of dianionic zirconium(IV) complexes with chelating amidophenolate ligands

The synthesis, characterization, and solution behavior of a series of six-coordinate zirconium(IV) dianions [ZrX2(ap)2]2- (ap = 2,4-di-tert-butyl-6-(tert-butylamido)phenolate; X = Ph, 3a; X = p-tolyl, 3b; X = Me, 4; X = NMe2, 5) are described. Complexes 3-5 were prepared by treating the neutral zirconium complex Zr(ap)2(THF)2 (1) with 2 equiv of LiX or by the direct reaction of apLi2 and LiX with ZrCl4. The complexes were isolated as lithium-etherate salts, and they were characterized by NMR spectroscopy and single-crystal X-ray diffraction. In non-coordinating solvents such as benzene-d6, complexes 3-5 are robust in solution, but in coordinating solvents such as THF-d8, dissociation of LiX was observed. The rate of LiX loss was evaluated by exchange reactions; the reaction rate constants span nine orders of magnitude at 298 K, with the slowest reaction being the dissociation of PhLi from 3a (tau1/2 = 4 h) and the fastest reaction being the dissociation of LiNMe2 from 5 (tau1/2 = 53 mus). In the case of LiNMe2 dissociation from 5, activation parameters suggest that the rate-determining step is purely dissociative; however, for diphenyl and dimethyl complexes 3a and 4, respectively, activation parameters suggest a solvent-assisted rate-determining step.     

Structural analysis of poly[(R,S)-3-hydroxybutyrate-co-L-lactide] copolyesters by electrospray ionization ion trap mass spectrometry

Two random copolyesters of poly[(R,S)-3-hydroxybutyrate-co-L-lactide] (P[(R,S)-3HB-co-LA]), prepared by equimolar reaction of (R,S)-beta-butyrolactone with L-lactic acid and (R,S)-3-hydroxybutyric acid with L-lactide, respectively, were characterized by electrospray ionization ion trap mass spectrometry (ESI-ITMS). Detailed studies of these copolyesters were performed by means of collision-induced dissociation (CID). The molecular architecture of individual copolyester macromolecules, including chemical structures of their end groups (hydroxyl and carboxylate), were established on the basis of their ESI mass spectra. The influence of an intermolecular transesterification reaction on the microstructure of the copolyester synthesized by equimolar reaction of (R,S)-3-hydroxybutyric acid with L-lactide was observed. The mass spectra provided information on sequence distribution and indicated that, despite the synthetic pathway applied, random P[(R,S)-3HB-co-LA] copolyesters were formed predominantly. The arrangements of comonomer structural units along the copolyester chains were evaluated by the respective ESI-MS/MS fragmentation pathways.     

Heat of hydrogenation of 1,5-dehydroquadricyclane. A computational and experimental study of a highly pyramidalized alkene

The radical anion of the highly pyramidalized alkene 1,5-dehydroquadricyclane (1) was generated in the gas phase from the Squires reaction of 1,5-bis(trimethylsilyl)quadricyclane with F-/F2. The electron binding energy and proton affinity of 1*- were determined by bracketing experiments to be 0.6 +/- 0.1 eV and 386 +/- 5 kcal/mol, respectively. These values are in good agreement with values predicted by density functional theory (B3LYP/6-31+G*) and ab initio (CASPT2/6-31+G*) calculations. The experimental heat of hydrogenation of 1, obtained from a thermochemical cycle, was found to be 91 +/- 9 kcal/mol. This value of deltaH(H2) leads to values of 67 +/- 9 kcal/mol for the olefin strain energy (OSE) of 1, 172 +/- 9 kcal/mol for its heat of formation, and 23 +/- 9 kcal/mol for its pi bond dissociation enthalpy. Since the retro-Diels-Alder reaction of neutral 1 is computed to be highly exothermic, the finding that 1*- apparently does not undergo a retro-Diels-Alder reaction is of particular interest. The B3LYP/6-31+G* optimized geometry of 1 suggests that the bonding in this alkene is partially delocalized, presumably because the highly pyramidalized double bond in 1 interacts with the distal cyclopropane bonds in a manner that eventually leads to a retro-Diels-Alder reaction. The good agreement of the B3LYP and (2/2)CASPT2 values for the heat of hydrogenation and OSE of 1 with the experimentally derived values provides indirect evidence for the correctness of the B3LYP prediction that the equilibrium geometry of 1 lies part way along the reaction coordinate to the transition structure for the retro-Diels-Alder reaction.     

The lowest-lying electronic singlet and triplet potential energy surfaces for the HNO-NOH system: energetics, unimolecular rate constants, tunneling and kinetic isotope effects for the isomerization and dissociation reactions

The lowest-lying electronic singlet and triplet potential energy surfaces (PES) for the HNO-NOH system have been investigated employing high level ab initio quantum chemical methods. The reaction energies and barriers have been predicted for two isomerization and four dissociation reactions. Total energies are extrapolated to the complete basis set limit applying focal point analyses. Anharmonic zero-point vibrational energies, diagonal Born-Oppenheimer corrections, relativistic effects, and core correlation corrections are also taken into account. On the singlet PES, the (1)HNO → (1)NOH endothermicity including all corrections is predicted to be 42.23 ± 0.2 kcal mol(-1). For the barrierless decomposition of (1)HNO to H + NO, the dissociation energy is estimated to be 47.48 ± 0.2 kcal mol(-1). For (1)NOH → H + NO, the reaction endothermicity and barrier are 5.25 ± 0.2 and 7.88 ± 0.2 kcal mol(-1). On the triplet PES the reaction energy and barrier including all corrections are predicted to be 7.73 ± 0.2 and 39.31 ± 0.2 kcal mol(-1) for the isomerization reaction (3)HNO → (3)NOH. For the triplet dissociation reaction (to H + NO) the corresponding results are 29.03 ± 0.2 and 32.41 ± 0.2 kcal mol(-1). Analogous results are 21.30 ± 0.2 and 33.67 ± 0.2 kcal mol(-1) for the dissociation reaction of (3)NOH (to H + NO). Unimolecular rate constants for the isomerization and dissociation reactions were obtained utilizing kinetic modeling methods. The tunneling and kinetic isotope effects are also investigated for these reactions. The adiabatic singlet-triplet energy splittings are predicted to be 18.45 ± 0.2 and 16.05 ± 0.2 kcal mol(-1) for HNO and NOH, respectively. Kinetic analyses based on solution of simultaneous first-order ordinary-differential rate equations demonstrate that the singlet NOH molecule will be difficult to prepare at room temperature, while the triplet NOH molecule is viable with respect to isomerization and dissociation reactions up to 400 K. Hence, our theoretical findings clearly explain why (1)NOH has not yet been observed experimentally.     

Transmetalation of methyl groups supported by Pt(II)-Au(I) bonds in the gas phase, in silico, and in solution

We report Pt(II)-to-Au(I) methyl transfer reactions that occur in the gas phase and in solution. The heterobimetallic Pt(II)/Au(I) complexes {[(dmpe)PtMe(2)][AuPR(3)]}(+) (R = Me (2a), Ph (2b), (t)Bu (2c)), observed in the gas phase by means of electrospray ionization, were subjected to collision induced dissociation (CID) from which we could observe Pt-to-Au transmetalation along two reaction pathways involving formation of a Au-Me bond, analogous to those observed for the Pt(II)/Cu(I) complex recently reported. In the first pathway, neutral AuMe is generated with concomitant migration of PR(3) from Au(I) to the Pt(II) center, forming cation [(dmpe)PtMe(PR(3))](+) (R = Me (5a) or Ph (5b)). In the second pathway, the monophosphine stays attached to the gold center, yielding cation [(dmpe)PtMe](+) (7) and R(3)PAuMe. Quantitative energy-resolved collision induced dissociation experiments as well as density functional theory (DFT) calculations were used to investigate the potential surface involved in the transmetalation processes. Energy barriers of 22.3 and 47.9 kcal mol(-1) for the two reaction processes of 2b and of 45.4 kcal mol(-1) for the single reaction process of 2c were obtained. Parallel reactivity is observed in THF solution, allowing for a comparison of the product distributions with those observed in the gas phase, and the postulation of simple steric control of the branching ratio between the two pathways. DFT calculations at the M06-2X//BP86/TZP level were in good agreement with the experiments.     

Dissociative photoionization of mono-, di- and trimethylamine studied by a combined threshold photoelectron photoion coincidence spectroscopy and computational approach

Energy selected mono-, di- and trimethylamine ions were prepared by threshold photoelectron photoion coincidence spectroscopy (TPEPICO). Below 13 eV, the main dissociative photoionization path of these molecules is hydrogen atom loss. The ion time-of-flight (TOF) distributions and breakdown diagrams for H loss are analyzed in terms of the statistical RRKM theory, which includes tunneling. Experimental evidence, supported by quantum chemical calculations, indicates that the reverse barrier along the H loss potential energy curve for monomethylamine is 1.8 +/- 0.6 kJ mol(-1). Accurate dissociation onset energies are derived from the TOF simulation, and from this analysis we conclude that Delta(f)H degrees (298K)[CH(2)NH(2)(+)] = 750.4 +/- 1.3 kJ mol(-1) and Delta(f)H degrees (298K)[CH(2)NH(CH(3))(+)] = 710.9 +/- 2.8 kJ mol(-1). Quantum chemical calculations at the G3, G3B3, CBS-APNO and W1U levels are extensively used to support the experimental data. The comparison between experimental and ab initio isodesmic reaction heats also suggests that Delta(f)H degrees (298K)[N(CH(3))(3)] = -27.2 +/- 2 kJ mol(-1), and that the dimethylamine ionization energy is 8.32 +/- 0.03 eV, both of which are in slight disagreement with previous experimental values. Above 13 eV photon energy, additional dissociation channels appear besides the H atom loss, such as a sequential C(2)H(4) loss from trimethylamine for which a dissociation mechanism is proposed.     

Rate constant for the reaction C2H5 + HBr → C2H6 + Br

RRKM theory has been employed to analyze the kinetics of the title reaction, in particular, the once-controversial negative activation energy. Stationary points along the reaction coordinate were characterized with coupled cluster theory combined with basis set extrapolation to the complete basis set limit. A shallow minimum, bound by 9.7 kJ?mol(-1) relative to C(2)H(5) + HBr, was located, with a very small energy barrier to dissociation to Br + C(2)H(6). The transition state is tight compared to the adduct. The influence of vibrational anharmonicity on the kinetics and thermochemistry of the title reaction were explored quantitatively. With adjustment of the adduct binding energy by ～4 kJ?mol(-1), the computed rate constants may be brought into agreement with most experimental data in the literature, including new room-temperature results described here. There are indications that at temperatures above those studied experimentally, the activation energy may switch from negative to positive.     

Inclined N2 desorption in a steady-state N2O + CO reaction on Pd(110)

The angular and velocity distributions of desorbing products were analyzed in the course of a catalyzed N2O + CO reaction on Pd(110). The reaction proceeded steadily above 450 K, and the N2 desorption merely collimated sharply along 45 degrees off the surface normal toward the [001] direction. It is proposed that this peculiar N2 desorption is induced by the decomposition of adsorbed N2O oriented along the [001] direction. On the basis of the observation of similar inclined N2 desorption in both NO + CO and N2O + CO reactions, the N2 formation via the intermediate N2Oa dissociation was confirmed in catalytic NO reduction.     

A DFT Study on the Stable Structures and Dissociation Mechanism of C3O6 Cluster

Using geometrical optimization and DFT method at the B3LYP/6-31G (d) level, nineteen equilibrium geometries were identified, and three transition states of dissociation reaction of C3O6 clusters were also found. The vibrational frequencies and intrinsic reaction coordinate (IRC) verification at the same level were computed to verify the transitions. And then we calculated the dissociation energies and analyzed the dissociation channels. The computational results show that the dissociation energies of C3O6 isomers relative to three CO2 are between 1.509 × 103 and 10.61 × 103 kJ·kg-1, and the energy barriers of the reactions are 92.857, 131.138 and 185.793 kJ·mol-1. Both the high dissociation energies and high energy barriers show that C3O6 clusters studied in this paper are stable enough to be used as high-energy-density materials.     

Mechanistic insight into the gas-phase reactions of methylamine with ground state Co+(3F) and Ni+(2D)

The gas-phase reaction mechanisms of methylamine (MA) with the ground-state Co(+)((3)F) and Ni(+)((2)D) are theoretically investigated using density functional theory at both the B3LYP/6-311++G(d,p) and B3LYP/6-311++G(3df,2p) levels. The reactions for hydride abstraction and dehydrogenation are analyzed in terms of the topology of potential energy surfaces (PESs). Co(+) and Ni(+) perform similar roles along the isomerization processes to the final products. Hydride abstraction takes place via the key species of metal cation-methyl-H intermediate, followed by a charge transfer process before the direct dissociation of CH(2)NH(2)(+)···MH (M = Co, Ni). The enthalpies of reaction, stability of metal cation-methyl-H species, and competition between different channels account for the sequence of the hydride abstraction products: CoH < NiH < CuH. The most competitive dehydrogenation route occurs through a stepwise reaction, consisting of initial C-H activation, amino-H shift, and direct dissociation of the precursor CH(2)NHM(+)···H(2). This theoretical work sheds new light on the experimental observations and provides fundamental understanding of the reaction mechanisms of amine prototype with late first-row transition metal cations.     

Recognition and dissociation kinetics in the interfacial molecular recognition of barbituric acid by amphiphilic melamine-type monolayers

Progress in the understanding of interfacial molecular recognition kinetics is obtained by use of the sweeping technique for experimental studies of the reaction kinetics between a host monolayer and a non-surface-active species dissolved in the aqueous subphase. The experimental results show that the interfacial recognition reaction between a 2C(11)H(23)-melamine (2,4-di(n-undecylamino)-6-amino-1,3,5-triazine) monolayer and dissolved barbituric acid is reversible when the 2C(11)H(23)-melamine/barbituric acid monolayer is transferred back onto a pure water subphase. The kinetics of the recognition and dissociation reaction is experimentally and theoretically investigated. The approximate additive theoretical model developed recently is extended to consider the dissociation kinetics of the interfacial supramolecular complex. The kinetic constants for the recognition and dissociation reactions in the mixed monolayer consisting of 2C(11)H(23)-melamine and 2C(11)H(23)-melamine/barbituric acid complex are determined. It is shown that the kinetic constant of the recognition reaction is nearly independent of temperature, whereas that of the dissociation reaction increases with increasing temperature.