Intramolecular hydrogen bond energy and cooperative interactions in α-, β-, and γ-cyclodextrin conformers

Accurate estimation of individual intramolecular hydrogen bond (H-bond) energies is an intricate task for multiply H-bonded systems. In such cases, the hydrogen bond strengths could be highly influenced by the cooperative interactions, for example, those between hydroxyl groups in sugars. In this work, we use the recently proposed molecular tailoring approach-based quantification (Deshmukh, Gadre, and Bartolotti, J Phys Chem A 2006, 110, 12519) to the extended systems of cyclodextrins (CDs). Further, the structure and stability of different conformers of α-, β-, and γ-CDs are explained based on the energetics and cooperative contribution to the strength of these H-bonds. The estimated O-H···O H-bond energies in the various CD conformers are found to vary widely from 1.1 to 8.3 kcal mol(-1). The calculated energy contributions to cooperativity toward the H-bond strengths fall in the range of 0.25-2.75 kcal mol(-1).     

A simple molecular-orbital study of theβ-,α-, and p-bands in triphenylenes

Clar has observed that the spectra of annellated derivatives of triphenylene such as II, III, IV below show remarkable resemblance to those of the phenes defined by the central ring of the triphenylene and its two longest acene limbs, II resembling tetraphene I, and III and IV pentaphene V. We show that this observation can be explained in terms of a simple modification of the Hückel molecular-orbital method.

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Zusammenfassung Eine Beobachtung von Clar hat gezeigt, daß die Spektren der Benzologen des Triphenylens, wie z. B. II, III, IV außerordentlich ähnlich sind denen der Phene, die ausgehend vom zentralen Ring und den beiden längsten Armen der obigen Systeme gebildet werden. Daher ähnelt das Spektrum von II stark dem des Tetraphens I und die von III und IV dem des Pentaphens V. Es wird gezeigt, daß dieser Beobachtung durch eine einfache Modifikation der Hückelschen MO-Theorie Rechnung getragen werden kann.

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Résumé Clar a observé que les spectres d'absorption des dérivés annelés du triphénylène tels que, II, III et IV montrent une ressemblance extraordinaire à ceux des phènes définis par l'anneau central du triphényléne et ses deux armes les plus longues. Ainsi le spectre de II ressemble à celui du tétraphène et ceux de III et de IV à celui du pentaphène V. Nous avons démontré qu'on peut expliquer cette observation par une modification simple de la méthode des orbitales moléculaires d'Hückel.

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We gratefully acknowledge many helpful discussions with Dr. E. Clar and Dr. J.-F. Guye-Vuilléme and the award of a D. S. I. R. Maintenance Grant to one of us (D. A. M.-B.). Chemistry Department, University of Glasgow.     

Steric effects in the catalytic amination of γ-, δ-, and ε-glycols

The amination of butane-1,4-diol, isomeric dipropylene glycols, and cyclohexane-1,4-diyldimethanol in the presence of nickel/copper/chromium catalysts has been studied. The effect of the initial glycol structure on the reaction selectivity has been estimated.     

Distribution of α-, β-, and γ-Phases in a Multi-flow Injection-molded Hierarchical Structure

In the current work, a custom-made vibration injection molding device that can provide oscillatory pressure was utilized to create an injection-molded hierarchical structure. Growth competition among α, β, and γ phases in the injection-molded structure can be studied because of the presence of this hierarchical structure, wherein shish-kebab and spherulite layers were arranged alternately along the thickness direction. The γ crystals only existed in layers subjected to high pressure and shear stress, whereas β crystals formed between the shear layers. The change in trend of the γ fraction was similar to that of parent-to-daughter ratio. In addition, this hierarchical and alternating crystal structure can sharply increase the mechanical properties.     

NHC-Activations on α-, β-, γ-, and Beyond

Over the recent decades, due to the special electronic characteristics and diverse reactivities, N-heterocyclic carbene (NHC) has received significant interest in organocatalyzed reactions. The formation of Breslow intermediates by NHC can convert into acyl anion equivalent, enolates, homoenolate, acyl azolium, and vinyl enolate etc., and the cycloaddition reactions of these species has attracted lots of attention. In this review, we focus on the summry of the development of NHC-activation of carbonyl carbon (or imine carbon) in situ, α-, β-, γ-, and beyond, and the cycloaddition reaction of these species.     

A thermodynamic study of α-, β-, and γ-cyclodextrin-complexed m-methyl red in alkaline solutions

The UV/Visible spectra of m-methyl red (m-MR) ({3-[4-(dimethyl-amino) phenylazo] benzoic acid}) were examined in basic, acidic and strongly acidic aqueous solutions. The observed spectra of m-MR were analyzed and compared with the tautomeric and resonance structures that suggested theoretically. Three isosbestic points in the spectra were observed around 508, 464 and 443 nm representing three different equilibriums between four different species of m-MR. The inclusion constant (K_f) for the inclusion of basic form of m-MR with alpha-, Beta-, and gamma-Cyclodextrin (α-, β- and γ-CD) was evaluated at different temperatures using Benesi-Hildebrand method. The values of K_f at 25 °C were found to be 8.70 × 10³, 4.93 × 10³ mol^?1 dm³ and 2.95 × 10⁷ mol^?2 dm⁶ basis on the inclusion complex ratios (m-MR:CD) of 1:1, 1:1, and 2:1 respectively. The values of the thermodynamic quantities ΔH°, ΔS°, ΔG° for the different inclusion processes were calculated by using Van’t Hoff plot. For all cases of the studied inclusion processes, these inclusions were favored through entropy and enthalpy changes.     

Synthetic Approaches to α-, β-, γ-, and δ-Lycoranes

Lycorane is a pentacyclic core presented in alkaloids isolated from the Amaryllidaceae family of herbaceous flowering plants. Members of this class of natural products have shown to display important biological properties including analgesic, antiviral, and antiproliferative activities. This review presents the known synthetic routes toward α-, β-, γ-, and δ-lycoranes. α-(19 routes), β-(10 routes), γ-(38 routes), and δ-(6 routes).     

α,β- and β,γ-unsaturated phosphonium salts in reactions with halogenating agents

Reaction of 1,4-bisphosphonium salts containing common buta-1,3-dienylene group with the halogenating agenst such as halogens and copper halides is studied. It was found than in all the cases instead of the expected products of the 1,2- or 1,4-addition to the above-mentioned salts the adducts with complex anions were formed quantitatively. According to the X-ray studies of bis(tributylphosphonio)buta-1,3-dienotribromocuprate the positive charge on phosphorus is compensated with the complex [Cu₂Br₆]²⁻ anion.     

Metal-catalyzed cycloetherification reactions of β,γ- and γ,δ-allendiols: chemo-, regio-, and stereocontrol in the synthesis of oxacycles

Versatile routes that lead to a variety of functionalized enantiopure tetrahydrofurans, dihydropyrans, and tetrahydrooxepines are based on chemo-, regio-, and stereocontrolled metal-catalyzed oxycyclization reactions of β,γ- and γ,δ-allendiols, which were readily prepared from (R)-2,3-O-isopropylideneglyceraldehyde. The application of Pd(II), Pt(II), Au(III), or La(III) salts as the catalysts gives controlled access to differently sized oxacycles in enantiopure form. Usually, chemoselective cyclization reactions occurred exclusively by attack of the secondary hydroxy group (except for the oxybromination of phenyl β,γ-allenic diols 3b and 3d) to an allenic carbon atom. Regio- and stereocontrol issues are mainly influenced by the nature of the metal catalysts and substituents.     

Dicyanoanilines as potential and dual inhibitors of α-amylase and α-glucosidase enzymes: Synthesis,characterization, in vitro,in silico,and kinetics studies

The present study comprised of the synthesis of dicyanoaniline derivatives of pyridine, thiophene, furan, and substituted phenyl 1–29. All synthetic derivatives were evaluated for their potential to inhibit α-amylase and α-glucosidase enzymes. The synthesized compounds are classified into three categories A, B, and C based on variable substituents at R₁ and R_2, and the structure–activity relationship was discussed accordingly. Amongst twenty-nine derivatives, 1–29, five compounds 2, 9, 18, 23, and 24 displayed excellent inhibition against α-amylase and α-glucosidase enzymes with the IC₅₀ values ranging between 20.33 ± 0.02–25.50 ± 0.06 µM and 21.01 ± 0.12–27.75 ± 0.17 µM, respectively, while other compounds showed moderate to weak inhibition against both enzymes. Acarbose was used as the positive control in this study. The enzyme kinetic studies showed non-competitive and un-competitive types of inhibition mechanism against α-amylase and α-glucosidase enzymes, respectively. In silico studies have demonstrated the involvement of these molecules in numerous binding interactions within the active site of the enzyme.     

Competition between n,π- and n,σ-orbital interactions in chlorinated ethers R-O-chcir 1

Using the AM-1 method, we have studied CH₂=CH-O-CHClR¹ molecules (R¹=H, Me). We have shown that the sc conformation with respect to the bond is preferred. We have systematized the¹³Cl NQR data on the degree of manifestation of the generalized anomeric effect in R-OCHClR¹ [R=Me, Ph, Vyn, R²C(=O)] molecules. We have established that enhancement of n, conjugation in the R-O fragment leads to weakening of the n, interaction in the O-C-Cl triad.Deceased.     

Thermodynamic Properties of Styrenetricarbonylchromium, α-Methylstyrenetricarbonylchromium,and p-Methylstyrenetricarbonylchromium in the Range 0-450 K

The thermodynamic properties of styrenetricarbonylchromium, -methylstyrenetricarbonylchromium, and p-methylstyrenetricarbonylchromium were studied with adiabatic vacuum and dynamic calorimeters. The heat capacity in the range 5-450 K (error about 0.3% in most cases) and the temperatures and enthalpies of the phase transitions were determined. The experimental data were used to calculate the thermodynamic functions C ⁰ _p(T), H ⁰(T) - H ⁰(0), S ⁰(T), and G ⁰(T) - H ⁰(0) for the range from 0 to 330-400 K, and also the isochoric heat capacity C _v and its lattice (_Cv,latt) and atomic (C _v,at) contributions for the range from 0 K to T ⁰ _m; the parameters = C ⁰ _p/C _v were evaluated. The thermodynamic properties were considered in relation to the composition and structure of the compounds.     

γ- and UV-radiation-induced degradation of sphingomyelin,lysosphingomyelin, and related compounds

The experimental data on the formation of final products in the radiolysis of 2-aminoglycerol and lysosphingomyelin (sphingosine phosphocholine) and in the photolysis of N-(2-hydroxypropyl)hexanamide and sphingomyelin suggest the occurrence of the radiation-induced degradation of the above substances with C-C bond cleavage. It was hypothesized that this process occurs by the formation and subsequent degradation of the N-centered radicals of the substrates.     

Stabilization of β-hairpin structures via inter-strand π-π and hydrogen bond interactions in α-, β-, γ-hybrid peptides

Synthesis and conformational studies of α-, β-, γ-hybrid peptides containing a pyrrole amino acid (Paa, 1) and a furan amino acid (Faa, 2), namely Boc-β-Phe-Faa-d-Pro-Gly-Paa-β-HGly-Faa-OMe (3) and Boc-Paa-β-Phe-Faa-d-Pro-Gly-Paa-β-HGly-Faa-OMe (4), were carried out and they adopt β-hairpin structures stabilized via inter-strand π-π and hydrogen bonding interactions.     

Synthesis,characterisation and phase transition studies in N-(-4-ethyloxybenzylydene)-4’-alkoxyanilines

Synthesis and characterisation are carried out in N-(-4-ethyloxybenzylidene)-4?-alkoxyanilines, 2O.Om liquid crystalline (LC) compounds with m = 3, 4 and 6–10. All the compounds exhibit monovariant nematic phase except with m = 10; the LC material shows bivariant nematic-smectic-C in addition to the nematic phase. Further, the variation in density with temperature in all these seven compounds is studied. The density and thermal expansion coefficient results reveal that the phase transitions, namely isotropic to nematic and nematic to SmC, present in these compounds show first-order nature as expected and that all the parameters show characteristic change in the vicinity of the phase transformation. The results are discussed in the light of the data available on other nO.Om compounds.     

Direct Synthesis of Amphiphilic α-, β-, and γ-Cyclodextrins

ABSTRACT

The clean one step synthesis of the amphiphilic α-, β-, and γ-cyclodextrins starting from per-(6-bromo-6-deoxy)-α-, -β-, and -γ-cyclodextrins is described. The role of the lipophilic tail is played by various aryl groups (phenyl, p-bromophenyl, p-O-butoxyphenyl, p-pentylphenyl, and o-, m-, and p-nitrophenyl) linked by a thioether bridge to the position C-6 of each glucopyranose unit. The yields of the S-alkylation reactions were very high (85-95%).     

Hydrocarbon (π- and σ-) complexes of nickel,palladium and platinum: Synthesis,reactivity and applications

With the exception of metallocenes, transition metal complexes with hydrocarbon ligands only are rare. However, complexes of this type containing Group 10 metals are known and have been shown to be quite stable. These complexes are versatile precursors for many organometallic compounds. In addition, such compounds can play an important role in many reactions including C–H or C–C activation reactions and have useful applications in the thermal and photochemical production of metal films by chemical vapour deposition (CVD). The present review summarizes the synthesis, properties and chemistry of hydrocarbon complexes of Group 10 metals of the type L_nM or L_nMR₁R₂ (where L_n = σ- or π-hydrocarbon ligands; M = Ni, Pd and Pt; R₁, R₂ = σ-hydrocarbon ligands) without the involvement of any hetero donor ligands such as N, P, O and S in the metal coordination spheres.     

Conformation and chiral effects in α,β,α-tripeptides

Short α,β,α-tripeptides comprising a central chiral trisubstituted β(2,2,3)*-amino acid residue form unusual γ-turns and δ-turns in CDCl(3) and DMSO-d(6) solutions but do not form β-turns. Thermal coefficients of backbone amide protons, 2D-NMR spectra, and molecular modeling revealed that these motifs were strongly dependent on the configuration (chiral effect) of the central β-amino acid residue within the triad. Accordingly, SSS tripeptides adopted an intraresidual γ-turn like (C6) arrangement in the central β-amino acid, whereas SRS diastereomers preferred an extended δ-turn (C9) conformation. A different SRS-stabilizing bias was observed in the crystal structures of the same compounds, which shared the extended δ-turn (C9) found in solution, but incorporated an additional extended β-turn (C11) to form an overlapped double turn motif.     

Host–guest interactions between niobocene dichloride and α-, β-, and γ-cyclodextrins: preparation and characterization

The possible inclusion complexes of Cp₂NbCl₂ into α-, β-, and γ-CD hosts have been investigated. The existence of a true inclusion complex in the solid state was confirmed by a combination of thermogravimetric analysis, FTIR, PXRD, and ¹³C CP-MAS NMR spectroscopies. The solid-state results demonstrated that α-cyclodextrin does not form inclusion complexes with Cp₂NbCl₂ whereas β- and γ-cyclodextrins do form such complexes. PXRD, NMR, and thermal analysis showed that the organometallic molecules of Cp₂NbCl₂OH are included in the cavities of β- and γ-cyclodextrins, possibly adopting a symmetrical conformation in the complex, with each glucose unit in a similar environment. In solution, ¹H NMR experiments suggest that niobocene has a shallow penetration on the β-CD leading to upfield shift on H-3 signal with a minor perturbation on the H-5 proton while for γ-CD, both H-3 and H-5 are shifted upfield substantially. This suggests that niobocene penetrates deeper into the γ-CD cavity than in the β-CD cavity, as a result of the cavity size. Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users.