Recognition and catalytic hydrolysis of adenosine 5′-triphosphate by cadmium(II) and L-glutamic acid

Interactions among Cd²⁺, glutamic acid (Glu), and adenosine 5′-triphosphate (ATP) have been studied by potentiometric pH titration, IR, Raman, fluorescence, and NMR methods. In the Cd²⁺–ATP binary system, the main interaction sites are the α-, β-, and γ-phosphate groups, N-1, and/or N-7. Cd²⁺ binds to the N-1 site at relatively low pH and binds to the N-7 site of adenosine ring of ATP with increasing pH. In the Cd²⁺–Glu–ATP ternary system, ATP mainly binds to Cd²⁺ by the triphosphate chain. Oxygens of Glu coordinate with Cd²⁺ to form a complex to catalyze ATP hydrolysis. Hydrolysis of ATP catalyzed by the CdGlu complex was studied at pH 7.0 and 80°C by ³¹P-NMR spectrometry. Kinetics studies showed that the rate constant of ATP hydrolysis was 0.0199?min^?1 in the ternary system, which is 9.9-fold faster than that in the ATP solution (2.01?×?10^?3?min^?1). Hydrolysis occurs through an addition–elimination reaction mechanism with Cd²⁺ regulating the recognition and catalytic hydrolysis of ATP; water participates in the hydrolysis reaction of ATP at different steps with different functions in the ternary system.     

Adsorption of 125I on palladium coated silver wire

The adsorption of ¹²⁵I on palladium coated silver wires was studied in this paper. The experimental conditions, e.g., reaction volume, carrier concentration, reaction time, reaction temperature, pH of the reaction mixture, were systematically optimized to obtain quantitative adsorption of ¹²⁵I on palladium coated silver wires. The experiments were performed using potassium iodide 8–9 μg as carrier in a reaction volume of 100 μL incubated in ~50 °C water bath for ~1 h, and the pH of the reaction system was controlled at 2–2.5. The distribution of activity on palladium coated silver wire was uniform, and the source cores can be easily sealed by laser welding into titanium capsules.     

人宫颈癌细胞(Hela)内的31P核磁共振研究

建立了无损伤性³¹P NMR研究细胞内物质的实验方法, 并对人宫颈癌细胞(Hela)的³¹P NMR谱中含磷小分子代谢物的谱峰进行了分析; 细胞内无机磷(Pi)的化学位移对pH非常敏感, 通过测定其化学位移可间接确定细胞内的pH, Hela细胞内Pi峰的化学位移为5.88±0.01 (n＝3), 计算得到细胞内 pH值为7.05±0.01; 通过测量Hela细胞的³¹P NMR谱中ATP的α磷和β磷及γ磷的化学位移差值, 得出Hela细胞内Mg^2＋与ATP结合的复合物MgATP和整个ATP量的比值, 计算得到Hela细胞内游离Mg^2＋浓度为(253.3±0.13) mmol/L (n＝3), 与其它分析方法相比, ³¹P NMR测定细胞内游离Mg^2＋浓度具有对细胞样品无损伤的优点.     

Zinc electrodeposition on copper substrate using cyanide bath for the production of 66,67,68Ga

The electroplating of zinc is carried out in an alkaline cyanide bath. Operating parameters such as pH, temperature, and current density and amount of the electrolyte components are optimized. The optimum conditions of the electrodeposition of zinc were as follows: 2.7 g L⁻¹ ZnO, 7.1 g L⁻¹ KCN, 11.1 g L⁻¹ KOH, pH = 13–14, DC current density of ca 8.55 mA cm⁻² at 40–50 °C temperature with 89% current efficiency. SEM photomicrographs revealed fine-grained structure of the deposit from the bath.     

Mathematical modeling of kinetics of adenosine-5’-triphosphate hydrolysis catalyzed by the Zn2+ ion in the pH range 8.5–9.0

The kinetics of adenosine-5’-triphosphate (ATP) hydrolysis catalyzed by Zn²⁺ at pH 8.5–9.0 is analyzed by numerical simulation. The rates of product formation (adenosine diphosphate (ADP) and adenosine monophosphate (AMP)) are determined by a conformational transformation. In the sequence of steps of mutual transformations of cyclic (Cy) pH-dependent species, which are active in ATP hydrolysis to ADP, and open (Op) species, the rate-limiting step is the slow isomerization of ZnATP²-complexes. This slow step is determined by the abstraction of the OH^- group from a pentacovalent intermediate catalyzed by H₃O⁺. In the Op species,Zn ²⁺ is bound to the phosphate chain. In the Cy species, which can be hydrolized to ADP, Zn²⁺ coordinates a nitrogen atom in position 7 and γ-phosphate. The mutual transformations of conformers occur via pentacovalent intermediates with the participation of γ-phosphorus and include pseudotransformations. In the direct transformation CyOH^-⦚r OpOH^-, pseudotransformation is a rate-controlling step. The deprotonated open monomeric form OpOH^- is inactive in hydrolysis. Within the framework of the dimeric model and a more complex model that accounts for the role of trimeric associates ZnATP^2-, the general scheme of intermediate transformations is considered that accounts for the existence of a pH-independent pathway of hydrolysis. The rate and equilibrium constants are estimated. Concentration profiles for intermediate products during hydrolysis are described.     

Ratiometric Detection of Adenosine Triphosphate (ATP) in Water and Real‐Time Monitoring of Apyrase Activity with a Tripodal Zinc Complex

Two tripodal fluorescent probes Zn?L^{1 , 2} have been synthesised, and their anion‐binding capabilities were examined by using fluorescence spectroscopy. Probe Zn?L¹ allows the selective and ratiometric detection of adenosine triphosphate (ATP) at physiological pH, even in the presence of several competing anions, such as ADP, phosphate and bicarbonate. The probe was applied to the real‐time monitoring of the apyrase‐catalysed hydrolysis of ATP, in a medium that mimics an extracellular fluid.     

Evaluation of wet oxidation pretreatment for enzymatic hydrolysis of softwood

The wet oxidation pretreatment (water, oxygen, elevated temperature, and pressure) of softwood (Picea abies) was investigated for enhancing enzymatic hydrolysis. The pretreatment was preliminarily optimized. Six different combinations of reaction time, temperature, and pH were applied, and the compositions of solid and liquid fractions were analyzed. The solid fraction after wet oxidation contained 58–64% cellulose, 2–16% hemicellulose, and 24–30% lignin. The pretreatment series gave information about the roles of lignin and hemicellulose in the enzymatic hydrolysis. The temperature of the pretreatment, the residual hemicellulose content of the substrate, and the type of the commercial cellulase preparation used were the most important factors affecting the enzymatic hydrolysis. The highest sugar yield in a 72-h hydrolysis, 79% of theoretical, was obtained using a pretreatment of 200°C for 10 min at neutral pH.     

Kinetics and mechanism of adenosine 5′-triphosphate hydrolysis catalyzed by the Cu2+ ion: The role of conformation and the catalytic effect of the OH− ion

The kinetics of 5′-ATP hydrolysis catalyzed by the Cu²⁺ ion has been investigated by HPLC in the pH range 5.6–7.8 at 25°C. Two series of experiments differing in the initial [Cu · ATP]₀ (1: 1) concentration have been carried out. The reaction was being conducted up to ≈40% ATP conversion. The (CuATP^2?)₂OH^??ub;DOH^??ub; complex, which consists of two monomeric Cy(CuATP^2?) molecules (in which the N7 atom and the γ-phosphate group are coordinated to Cu²⁺), is responsible for the formation of CuADP^? + P_i (P_i is an inorganic phosphate). The highest possible DOH^? concentration at a given pH is reached at the initial stage of hydrolysis. The pH value at which the highest initial rate of ADP formation is reached (pH_max (w _{0, ADP})) decreases as the D concentration increases. At pH > pH_max, the decrease in the ADP formation rate in the course of the processes is pH-independent and, once an ATP conversion of 20–26% is reached, hydrolysis proceeds in a steady-state regime such that ADP and AMP form from ATP by parallel reactions. The participation of the OH^? ion in the catalysis of the formation of hydrolysis intermediates is considered.     

Enzymatic Production of Glutathione Coupling with an ATP Regeneration System Based on Polyphosphate Kinase

Glutathione (GSH) is an important reducing agent in the living cells. It is synthesized by a two-step reaction and requires two molecules of adenosine triphosphate (ATP) for one molecule GSH. The enzymatic cascade reaction in vitro is a promising approach to achieve a high titer and limit side reactions; although, a cost-effective phosphate donor for ATP regeneration is required. Triphosphate (PolyP₍₃₎), tetraphosphate (PolyP₍₄₎), and hexametaphosphate (PolyP₍₆₎) were investigated in this study. Triphosphate inhibited the bifunctional GSH synthetase (GshF) from Streptococcus agalactiae, while no significant inhibition was observed by adding hexametaphosphate. The polyphosphate kinase from Corynebacterium glutamicum was hence investigated to use hexametaphosphate for regeneration of ATP. Further, the orthogonal experiment, which includes seven factors (buffer concentration, pH value, ADP concentration, GshF dosage, polyphosphate kinase (PPK) dosage, reaction temperature, substrate ratio of amino acid, and reaction times), indicated that the capacity of buffer is the most significant factor of the reaction conditions for enzymatic production of glutathione coupling with a PPK-based ATP regeneration system. After optimizing the Mg²⁺ concentration, the reaction was scaled up to 250 mL in a stirred reactor with pH feedback control to stabilize the pH value of reaction system and nitrogen protection to avoid the oxidation of product. A yield of 12.32 g/L was achieved. This work provided a potential GshF-based enzymatic way coupling the PPK-based ATP regeneration to product GSH in the optimal conditions towards cost-effectiveness at the industrial scale.     

Temperature and pH stability of cellouronic acid

Cellouronic acid (CUA), (1 → 4)-β-d-polyglucuronate sodium salt, was prepared from regenerated cellulose by 2,2,6,6-tetramethylpiperidine-1-oxyl radical (TEMPO)-mediated oxidation in water at pH 10. Changes in chemical structure and degree of polymerization (DP) of CUA by treatment in water under various pH and temperature conditions were studied to evaluate the stability of CUA. No depolymerization occurred on CUA in water at pH 1.0–7.0 and room temperature, while clear depolymerization took place at pH 10 and 13 by β-elimination. When heated in water at >50 °C, CUA was depolymerized by hydrolysis at pH 1.0 and 4.8, and by both hydrolysis and β-elimination at pH 7.0. Kinetic studies showed that CUA depolymerization rate constant was roughly increased with increasing the pH or temperature. Especially, the depolymerization rate constant at pH 13 was approximately 128 and 55 times greater than those at pH 1.0 and 10, respectively, at 60 °C. Activation energies of hydrolysis and β-elimination of CUA were approximately 100 and 20 kJ mol⁻¹, respectively.     

Characterization of Sol-gel bioencapsulates for ester hydrolysis and synthesis

Candida rugosa lipase was entrapped in silica sol-gel particles prepared by hydrolysis of methyltrimethoxysilane and assayed by p-nitrophenyl palmitate hydrolysis, as a function of pH and temperature, giving pH optima of 7.8 (free enzyme) and 5.0–8.0 (immobilized enzyme). The optimum temperature for the immobilized enzyme (50–55°C) was 19°C higher than for the free enzyme. Thermal, operational, and storage stability were determined with n-butanol and bytyric acid, giving at 45°C a half-life 2.7 times greater for the immobilized enzyme; storage time was 21 d at room temperature. For ester synthesis, the optimum temperature was 47°C, and high esterification conversions were obtained under repeated batch cycles (half-life of 138 h).     

Kinetic and mechanistic studies on the interaction of adenosine with hydroxopentaaquarhodium(III) ion

The kinetics of the title reaction have been studied spectrophotometrically as a function of pH, [substrate], [adenosine] and temperature (50–65°C) by monitoring the appearance of a characteristic peak of the adenosine substituted product (λ_max = 289 nm). The reaction rate is pH dependent in the 3.0–4.3 range. With increase in [adenosine] the rate was found to increase and approached a limit at a higher adenosine concentration. The following rate law has been established at pH 4.3: d[Rh(H₂O)₃(OH)(adenosine)²⁺]/dt = k _a K _E[Rh(H₂O)₅(OH)²⁺]_total[adenosine]/ (1 + K _E[adenosine]) Rate and activation parameters are consistent with an associative interchange mechanism. Experimental results are discussed with reference to literature data for analogous systems. This revised version was published online in June 2006 with corrections to the Cover Date.     

Conformation of ATP and ADP Molecules in Aqueous Solutions Determined by High-Energy X-ray Diffraction

High-energy X-ray diffraction measurements were carried out at 26 °C for aqueous 1.0, 2.0 and 2.05 mol% disodium adenosine 5′-triphosphate (ATP) and 2.0 and 2.05 mol% disodium adenosine 5′-diphosphate (ADP) solutions in order to obtain direct experimental information on the intramolecular conformations of ATP and ADP molecules in aqueous solutions. Observed interference terms were analyzed in terms of the intramolecular geometry of the ATP and ADP molecules. Dihedral angles between adenine and the ribose group (t ₁), ribose-ring and methylene group of ribose (t ₂), and the methylene group of ribose and triphosphate (or diphosphate) group (t ₃), were determined through the least-squares fitting procedure of the observed interference term.     

Studies of the Rate Constant of Levodopa Methyl Ester Hydrolysis by LC

This paper investigates the hydrolysis kinetics of levodopa methyl ester in 0.05–1.5 M HCl between 37 and 75°C. An isocratic HPLC assay was developed for simultaneous determination of levodopa methyl ester and levodopa in the hydrolysate of levodopa methyl ester. A series of hydrolysis rate constants were obtained and the effects of hydrogen ion concentration and temperature on the reaction were evaluated. It was found that pH was a key factor at low temperature, but that when the temperature was raised, temperature became in turn the most influent factor on the hydrolysis. From the measured pseudo-first order reaction rate constants, the activation energy for levodopa methyl ester hydrolysis in 0.5, 1.0 and 1.5 M HCl were calculated to be 71.24, 74.32 and 76.57 kJ mol⁻¹, respectively. Revised: 24 May and 15 August 2005     

The effect of the oxidative properties of [Mg(H2O)6] in the triplet and singlet states on the energetics of adenosine triphosphate cleavage

The interaction of the adenosine triphosphate (ATP) molecule (the ATP subsystem) with the magnesium complex [Mg(H₂O)₆]²⁺ (the Mg subsystem) in the singlet (S) and triplet (T) states in an aqueous medium mimicked by 78 water molecules was studied by the molecular dynamics (density functional theory) method MD DFT:B3LYP with the 6–31G** basis set at T = 310 K. Potential energy surfaces for the S (lowest-lying) and T (highest-lying) states are significantly separated in space. The Mg complex moves along these surfaces to approach either oxygen atoms of the γ-β phosphate groups (O1–O2) (S PES) or oxygen atoms of β-α phosphate groups (O2–O3) (T PES). Chelation of the γ-β β-α and phosphates yields, respectively, a stable low-energy complex ([Mg(H₂O)₄-(O1–O2)ATP]²⁻) and a metastable high-energy complex ([Mg(H₂O)₂-(O2–O3)ATP]²⁻), which differ in the number of water molecules surrounding the Mg atom. Crossing of two triplet PESs is accompanied by the formation of an unstable state characterized by redistribution of spins between the Mg and ATP subsystems. This state, sensitive to interaction with the ²⁵Mg nuclear spin, induces an unpaired electron spin, which initiates the ATP cleavage by the ion-radical mechanism, yielding a reactive radical ion of adenosine monophosphate (•AMP⁻), which was earlier found experimentally by the of chemically induced dynamic nuclear polarization (CIDNP) method. Biological aspects of the results obtained are discussed. Original Russian Text ? A.A. Tulub, V.E. Stefanov, 2009, published in Zhurnal Neorganicheskoi Khimii, 2009, Vol. 54, No. 7, pp. 1188–1195.     

Acid-catalysed hydrolysis of cis -[Cr(C2O4)(AaraNH2)(OH2)(OSO2)]? (where AaraNH2 denotes methyl 3-amino-2,3-dideoxy-α,d -arabino-hexopyranoside)

The synthesised complex cis-[Cr(C₂O₄)(AaraNH₂)(OH₂)(OSO₂)]⁻ anion with SO ₃ ²⁻ as a ligand in the inner coordination sphere, where AaraNH₂ denotes methyl 3-amino-2,3-dideoxy-α-d-arabino-hexopyranoside, was hydrolysed in the presence of acid at H⁺ concentrations from 0.01 to 2.7 m (HClO₄). The reaction kinetics was studied with the stopped-flow spectrophotometric (u.v.–vis.) technique at temperatures of 5, 10, 15, 18 and 20 °C. This hydrolysis turned out to be a single-step process. Determined for this reaction were the rate constant k ₁ for the removal of SO₂ from the coordination sphere of the cis-[Cr(C₂O₄)(AaraNH₂)(OH₂)(OSO₂)]⁻ ion and the constant pK ₁ of the protonation of this species in the reaction preceding the hydrolysis. The final product of this reaction – a new complex of Cr^III, cis-[Cr(C₂O₄)(AaraNH₂)(OH₂)₂]⁺, was obtained. A mechanism for the acid hydrolysis reaction is put forward based on the analysis of the rate constants obtained.     

Mechanistic studies of methane partial oxidation to syngas over LiNiLaOx/Al2O3 catalyst

Reduction of vanadium-titanium oxide catalysts with hydrogen in the temperature range of 150–450°C results in the increase of the content of V⁴⁺ ions in substitution positions of TiO₂ with the anatase structure. The temperature increase up to 250°C results in the growth of the spectral intensity of V⁴⁺ associates in substitution positions of anatase. At higher treatment temperatures their intensity decreases due to the formation of VO₂ fragments in anatase. At 400°C and higher temperatures a solid solution of V⁴⁺ ions in rutile is formed.     

Modeling cellobiose hydrolysis with integrated kinetic models

The enzyme cellobiase Novozym 188, which is used for improving hydrolysis of bagasse with cellulase, was characterized in its commercial available form and integrated kinetic models were applied to the hydrolysis of cellobiose. The specific activity of this enzyme was determined for pH values from 3.0–7.0, and temperatures from 40–75°C, with cellobiose at 2 g/L. Thermal stability was measured at pH 4.8 and temperatures from 40–70°C. Substrate inhibition was studied at the same pH, 50°C, and cellobiose concentrations from 0.4–20 g/L. Product inhibition was determined at 50°C, pH 4.8, cellobiose concentrations of 2 and 20 g/L, and initial glucose concentration nearly zero or 1.8 g/L. The enzyme has shown the greatest specific activity, 17.8 U/mg, at pH 4.5 and 65°C. Thermal activation of the enzyme followed Arrhenius equation with the Energy of Activation being equal to 11 kcal/mol for pH values 4 and 5. Thermal deactivation was adequately modeled by the exponential decay model with Energy of Deactivation giving 81.6 kcal/mol. Kinetics parameters for substrate uncompetitive inhibition were: Km=2.42 mM, V _max=16.31 U/mg, Ks=54.2 mM. Substrate inhibition was clearly observed above 10 mM cellobiose. Product inhibition at the concentration studied has usually doubled the time necessary to reach the same conversion at the lower temperature tested.     

Experimental Determination of the Isotherm at 15°C of the System Mg2+/Cl?, SO42–H2O

 The diagram of the ternary system Mg²⁺/Cl⁻, SO₄ ²⁻–H₂O was established at 15°C by means of analytical and conductimetric measurements. Three compounds were found in this diagram, which are MgSO₄·6H₂O, MgSO₄·7H₂O, and MgCl₂·6H₂O. The solubility field of MgSO₄·7H₂O is important whereas those of MgSO₄·6H₂O and MgCl₂·6H₂O are small. The compositions (mass-%) of the two invariant points determined by the two methods are: MgSO₄:MgCl₂=2.73:33.80 and MgSO₄: MgCl₂=3.38:28.91. Both the measured and the calculated isotherm at 15°C have been used for modelling of the diagram Mg²⁺/Cl⁻, SO₄ ²⁻–H₂O between 0 and 35°C. The polythermal invariant point was approximately located between 15 and 10°C.     

Electroanalytical Characterization of Adenosine Mono-, Di- and Triphosphate Oxidation on Carbon Electrode

Abstract

Electrochemical oxidation of adenosine mononucleotides was characterized using a pencil graphite carbon electrode for the first time. All three adenosine mononucleotides, adenosine triphosphate (ATP), adenosine diphosphate (ADP), and adenosine monophosphate (AMP), showed irreversible electro-activity at the carbon electrode, yielding a well-defined oxidation current response. The peak potential was highly dependent on pH. The lowest mononucleotide concentration detected was 1 µM. The electro-analytical data presented here for the oxidation of adenosine mononucleotides provides the basis for further bioanalytical investigations related to DNA-drug interactions.