Synthesis and Structural Characterization of Two Tetra-Coordinated Co(II) Complexes with Benzimidazole Derivatives

Crystallography Reports - Two mononuclear tetra-coordinated cobalt(II) complexes with molecular formula [Co(L)2(SCN)2] (L = 1-methylbenzimidazole (mbim), 1; L = 1-methyl-2-aminobenzimidazole...     

Synthesis,Crystal Structure and Physicochemical Characterization of Two Ni(II)-Famotidine Metal Complexes

The coordination ability of the antisecretor agent Famotidine (FMT) was explored using Ni(II) as central ion. [NiFMT_H-2] and [Ni(FMT)₂]Cl₂ were obtained by the solvent evaporation method from the corresponding starting solutions at pH 8 and 4, respectively; the crystal structure was elucidated by single crystal X-ray diffraction in both cases.[NiFMT_H-2] resulted in a distorted square-planar geometry, where FMT acts as a tetradentate dianionic ligand through nitrogen atoms belonging to the guanidine group, the thiazolic ring and the side chain, and a sulfur atom from the thioether moiety. [Ni(FMT)₂]Cl₂ exhibits an octahedral environment composed by two FMT molecules that coordinate by nitrogen atoms deriving from guanidine and thiazole ring moieties, and the thioether sulfur atom. The physicochemical characterization was completed by means of FTIR and UV–Vis spectroscopies, and thermal analysis. Solubility measurements were performed and the results could be satisfactorily correlated with the solvation Gibbs free energy (ΔG_solv) values in aqueous solution obtained using the SDM model by DFT calculations.

Graphic Abstract

Ni(II) and famotidine form an octahedral complex at pH 4 where famotidine acts as a tridentate neutral ligand. In basic medium, it behaves as a tetradentate dianion, resulting in a quasi-planar complex. Spectroscopic and thermal data are consistent with single crystal X-ray diffraction structural elucidation. The relative stabilities were assessed by theoretical studies.

     

Nickel(II) and Cobalt(II) Complexes with Symmetrical Four-Dentate Ligands: Crystal Structures,Characterization, and Initial DNA Binding Mechanism Research

Abstract  

Four new nickel(II) and cobalt(II) complexes of Schiff base ligands: [Ni(L)Cl₂]·2H₂O (I), [Ni(L)(H₂O)₂] (NO₃)₂ (II), [Ni(L)(H₂O)₂] (ClO₄)₂ (III), and [Co(L) (H₂O)₂] (NO₃)₂ (IV) (L = 1,3-[bis(pyridine-2-imino)]propane) have been synthesized. The four complexes have been fully characterized by elemental analysis, IR, absorption spectra, emission spectra, and single-crystal X-ray diffraction analysis. The binding of the four complexes to calf thymus DNA (CT DNA) has been investigated by absorption spectra and emission spectra. The results of the two methods indicate that the action mode of complex I with DNA is intercalative mainly, and the action mode of complexes II, III, IV with DNA cannot be concluded, it should be sustained by other experimental measurements.     

A Neutral Four-Coordinate Mononuclear Cobalt(II) Complex with Biphenyl Appended N-Bidendate Ligand: Synthesis, Structure and Spectral Properties

Abstract  

A mononuclear cobalt(II) complex [Co(BP)(Cl₂)], 1 with a new N,N-bidentate ligand, BP ([N,N-(1,1′-biphenyl-2,2′-dimethylene)]-2-aminomethyl) pyridine) was synthesized and characterized by elemental analysis, UV–Vis, paramagnetic NMR, magnetic moment and single crystal XRD. The air and moisture stable Co(II) title complex is a 15 electron species which crystallizes in the monoclinic space group P2₁/n with cell dimensions a = 10.406(3), b = 12.873(4), c = 13.859(7) ?, β = 96.30(3)˚ and Z = 4. The cobalt atom has distorted tetrahedral (td) geometry with coordination provided by an amine and pyridyl nitrogen donors of BP and two terminal chloride ions. The packing is stabilized through C–H···π and van der Waals interactions.     

异构体复晶-席夫碱锌配合物的合成、晶体结构及表征

以2-乙酰吡啶、高氯酸锌和2-氨基乙基-二(3-氨基丙基)胺为原料在甲醇介质中反应制备全氮配位的异构体复晶-席夫碱锌配合物,用元素分析、红外光谱、核磁共振氢谱和热重分析对其进行了表征,用X射线单晶衍射仪测定其晶体结构,结果表明该异构体复晶-席夫碱锌配合物属于单斜晶系,P2(1)/c空间群.晶胞参数分别为a=1.8517(6) nm,b=1.5341(5) nm,c= 1.6061(5) nm,α=γ=90 °,β=90.743(6) °,V=4.562(2) nm3 ;Dc=1.577 g/cm3;Z= 4, F(000)=2240; μ=1.361 mm-1.     

Synthesis, Crystal Structures and Properties of Two Copper (II) Complexes with Pyridazine Derivative Ligand

Abstract  Two new complexes, [Cu(L)₂(CH₃OH)] · (ClO₄)₂ (1) and [Cu(L)₂(H₂O)] · (NO₃)₂ (2), have been synthesized and their crystal structures have been determined by X-ray analysis, where L = 3-(3,5-bimethylpyrazole-yl)-6-chloro-pyridazine]. The complex 1 crystallizes in the monoclinic, space group C2/c, and the coordination configuration of copper (II) is better described as trigonal pyramidal geometry with four N atoms from L and one O_methanol^. The coordination configuration of 2 is quite similar to that of 1 except O_water instead of O_methanol^. The intermolecular hydrogen bonds link the repeat units and extend the molecules to multinuclear structures in both compounds. The spectral properties of the title compounds have been studied and discussed. Furthermore, the antibacterial activities of the title compounds have been detected, the results indicate that the ligands and two copper(II) complexes exhibit certain fungicidal activities again several bacteria. Index Abstract  Two new complexes, [Cu(L)2(CH3OH)]·(ClO4)2 (1) and [Cu(L)2(H2O)]·(NO3)2 (2), have been synthesized and their crystal structures have been determined by X-ray analysis, where L= 3-(3,5-bimethylpyrazole-yl)-6-chloro-pyridazine. The intermolecular hydrogen bonds extend the molecules to multinuclear structures in both compounds.      

两个单核配合物晶态荧光材料的合成、晶体结构及性质

在水中采用蒸发溶剂的方法,合成了两个晶态单核配合物[Co(phen)3]·2H2SPA·0.5HSPA·10H2O(1)和[Ni(phen)2(H2O)2]·H2SPA·0.5HSPA·3H2O(2)(H2SPA'=间苯二甲酸-5-磺酸根阴离子,phen=1,10-邻菲罗啉).在配合物1中,中心离子与三个1,10-邻菲罗啉配位,形成[Co(phen)3]2+.未配位的水分子与阴离子H2SPA-和HSPA2-通过氢键相互连接形成三维的网状结构.在配合物2中,中心离子与两个1,10-邻菲罗啉分子和两个水分子配位,构成阳离子[Ni (phen)2(H2O)2]2+.阳离子[Ni (phen)2(H2O)2]2+与自由的阴离子H2SPA-、阴离子HSPA-和未配位的水分子通过氢键连接形成三维网状结构.室温下两个配合物均具有荧光发射峰,其发射峰分别在460 nm和439 nm.与配体相比,均发生明显的红移.荧光寿命分别为1.1244 ns和1.4882 ns.     

Self-Assembly of Two Isomorphous Thiocyanate Complexes of Co(II) and Ni(II) with 3-Hydroxypicolinamide

Abstract  

The synthesis, thermal and spectral characterization, and crystal structure of isomorphous thiocyanate cobalt(II) and nickel(II) complexes with 3-hydroxypicolinamide (3-OHpia), [M(C₆H₆N₂O₂)₂(NCS)₂]·2H₂O, are reported. The metal(II) ions are chelated by two cis-oriented 3-OHpia and two thiocyanate ligands in distorted octahedral geometry. The distortion within the coordination sphere is mainly imposed by formation of the chelate rings. The compounds crystallize in monoclinic space group P2/c with two symmetrically independent molecules and a = 14.4945(2) ?, b = 8.5906(1) ?, c = 16.3865(3) ?, β = 105.987(2)°, Z = 4 (1) and a = 14.4927(5) ?, b = 8.5912(3) ?, c = 16.2712(6) ?, β = 105.740(4)°, Z = 4 (2). Commonly observed supramolecular amide synthons are not robust enough to accommodate thiocyanate ions and H₂O molecules. But instead, neutral complexes are linked through hydrogen bonds leading to two different hydrogen bonding ribbon motifs involving amide moieties and H₂O molecules [C(8)R ₂²(12) along c axis] and amide moieties and thiocyanate ions [C(8)R ₂²(16) along b axis] for symmetrically related molecules labelled as 1 [Co1 (1) and Ni1 (2)] and 2 [Co2 (1) and Ni2 (2)], respectively.     

Supramolecular Cobalt(II), Copper(II) and Cadmium(II) Complexes Obtained from a Proton Transfer Compound including Pyridine-2,6-dicarboxylate and Propane-1,3-diaminium Ions; Synthesis,Characterization and Crystal Structure

Abstract The three complexes (pnH₂)[Co(pydc)₂]·4H₂O 1, (pnH₂)[Cu(pydc)₂]·4H₂O 2, and (pnH₂)[Cd(pydc)₂]·3.5H₂O 3 (pn: propane-1,3-diamine, pydc: pyridine-2,6-dicarboxylate) were prepared using a proton transfer compound (pnH₂)(pydc)·(pydcH₂)·2.5H₂O, LH ₂ and corresponding metallic salts. The characterization was carried out using elemental analysis, IR and NMR spectroscopy, and single crystal X-ray diffraction. Complexes 1 and 2 crystallize in space group P , but complex 3 crystallizes in space group P2/c. Cell parameters of the complexes are a = 8.449(1) ?, b = 11.668(1) ?, c = 12.801(1) ?, α = 115.748(2)°, β = 93.038(2)°, γ = 97.867(2)° for 1; a = 7.973(2) ?, b = 16.632(2) ?, c = 25.280(5) ?, α = 94.178(6)°, β = 95.186(6)°, γ = 91.603(5)° for 2 and a = 20.055(1) ?, b = 13.8161(9) ?, c = 8.2418(5) ?, β = 100.086(1)° for 3. The three crystal structures illustrate that the metal ion is six-coordinated by two pydc’s. In structures of 2 and 3, it can be seen that propane-1,3-diaminium fragments have different conformations. The complexes have ion-pairing interactions, O–H···O, N–H···O and C–H···O hydrogen bonds, π–π stacking as well as van der Waals forces as the main factors in formation of their supramolecular structures. Index Abstract Supramolecular Cobalt(II), Copper(II) and Cadmium(II) Complexes Obtained from a Proton Transfer Compound including Pyridine-2,6-dicarboxylate and Propane-1,3-diaminium Ions; Synthesis, Characterization and Crystal Structure Hossein Aghabozorg, Mohammad Ghadermazi,Bahar Nakhjavan, Faranak Manteghi The synthesis, characterization, crystal structure and non-covalent interactions of three supramolecular complexes of Co(II), Cu(II) and Cd(II) obtained by the reaction of a proton transfer compound i.e. (pnH₂)(pydc)·(pydcH₂)·2.5H₂O with the corresponding metallic salts are reported. Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Two Complexes from One Reaction of Nickel(II) Ion with a New Schiff Base Ligand

Abstract  

A new Schiff base ligand of 1-(2, 6-dichlorobenzylidene)-4-phenylthiosemicarbazide(C₁₄H₁₁Cl₂N₃S) has been synthesized, which crystallizes in monoclinic, space group C2/c with a = 18.551(7) ?, b = 6.963(3) ?, c = 23.185(9) ? and β = 93.122(6)o. The reaction of this ligand with NiAc₂·4H₂O gives two different Ni(II) complexes, one is general traditional mononuclear and another is unexpected trinuclear, where another quadridentate ligand of 1-(amino-N-phenylmethanethio)-4-phenyl-thiosemicarbazide(C₁₄H₁₄N₄S₂) is found. The mononuclear complex (C₃₂H₂₆Cl₄N₈NiS₂) crystallizes in triclinic, space group P−1 with a = 11.071(2) ?, b = 11.157(2) ?, c = 15.302(3) ?, α = 76.214(2)o, β = 87.902(2)o and γ = 79.586(3)o. The trinuclear complex (C₆₀H₅₀Cl₄N₁₆Ni₃S₆) crystallizes in orthorhombic, space group Pbcn with a = 19.673(3) ?, b = 16.094(3) ? and c = 20.465(4) ?. In above three compounds, there are some hydrogen bonds which help to construct the three dimensional net works and stabilize the molecular structures.     

Synthesis and Crystal Structure of a New Cobalt(II) Complex: Bis(pyridine)bis(4,4,4-trifluoro-1-(6-methoxynaphthalen-2-yl)butane-1,3-dione) Cobalt(II)

Abstract  

A new Co(II) complex 2 with ligand 4,4,4-trifluoro-1-(6-methoxynaphthalen-2-yl) butane-1,3-dione 1 and pyridine are prepared and crystallized from an acetone solution. The obtained red and transparent crystal conforms to the empirical formula of Co(C₁₅H₁₀O₃F₃)₂·(C₅H₅N)₂. It crystallizes in monoclinic, space group C2/c with a = 23.3152(14), b = 12.0225(7), c = 15.3950(10) ?, β = 124.1360(10)°, V = 3571.8(4) ?³, Z = 4, C₄₀H₃₀CoF₆N₂O₆, Mr = 807.59, F(000) = 1652, Dc = 1.502 g/cm³, μ = 0.564 mm⁻¹, the final R = 0.0466 and wR = 0.1043 for 3901 observed reflections with I > 2σ(I). X-ray structural analysis revealed that the Co(II) atom is coordinated by two oxygen atoms of 1,3-dione ligands 1 and two nitrogen atoms of pyridines, forming a distorted octahedron coordination geometry.     

Synthesis and Crystal Structure of a Mixed-Ligand Cobalt(II) Complex with 2-Aminobenzimidazole

Abstract  The cobalt(II) complex, [Co(abz)₂(SCN)₂] 1, has been synthesized by the reaction of cobalt(II) nitrate with ammonium thiocyanate and abz ligands (abz = 2-aminobenzimidazole), and was fully structurally characterized by elemental analysis, IR spectra, X-ray diffraction and thermogravimetric experiments. It crystallizes in the triclinic P-1 space group with a = 8.6316(10), b = 9.3426(10), c = 13.254(2) ?, α = 95.793(2), β = 95.870(2), γ = 115.7380(10), V = 945.1(2) ?³, and Z = 2. The central cobalt(II) atom is four-coordinated to nitrogen donors from two neutral abz ligands and two isothiocyanate anions respectively, adopting a slightly distorted tetrahedral geometry. In addition, the intermolecular N–H···N and N–H···S hydrogen bonds interactions link the discrete mononuclear units into infinite three-dimensional networks. Index Abstract  The essence sentence of the paper: In the mixed-ligand mononuclear complex, [Co(abz)₂(SCN)₂], the four coordinated cobalt(II) atom exhibits a slightly distort tetrahedron, which is further assembled into 3D infinite network by intermolecular hydrogen interactions.      

Crystal Structure and Photoluminescent Properties of Two Cadmium(II) Complexes with Orotic Acid

Abstract  

Assembly of orotic acid (2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid, H₃dtpc) and Cd(OAc)₂·2H₂O gave rise to two complexes [Cd₂(H₂dtpc)₂(H₂O)₆] (I) and [Cd(H₂dtpc)(bpy)(H₂O)]_n (II) (bpy = 2,2′-bipyridine). Complex (I) and (II) have been characterized by X-ray single crystal diffraction, IR, PXRD, TGA and fluorescence spectra. Structural analyses reveal that (I) is a binuclear structure, and complex (II) possesses a one-dimensional infinite zig-zag chain architecture and the chains are further assembled into 2D supramolecular network by strong hydrogen bonding interactions. Crystal data for (I): Monoclinic, space group P2(1)/n, a = 9.3221(19) ?, b = 6.6315(13) ?, c = 15.322(3) ?, β = 102.31(3)°, V = 925.4(3) ?³, Z = 4, R1 = 0.0269, and wR2 = 0.0604; for (II): Monoclinic, space group P2(1)/c, a = 9.9880(2) ?, b = 14.5085(2) ?, c = 11.6957(2) ?, β = 107.976(2)°, V = 1612.10(5) ?³, Z = 4, R1 = 0.0234 and wR2 = 0.0554.     

Synthesis,Characterziation and SOD Activity of Manganese(II) Complexes with Aza-Macrocyclic Ligand

Abstract  

Two manganese(II) complexes, [Mn₂(L)(H₂O)₄]Cl₂·6H₂O(1) and [Mn₂L(NCS)₂(H₂O)₂]·3H₂O(2) (L is 1,2,4-triazolato)-4,12,17,25-tetramethyl-1,2,5,8,11,14,15,18,21,24-decaza-4,11,17,24-cyclohexaeicosatetraene) have been prepared by template synthesis method. They are characterized by elemental analysis and IR. Single-crystal X-ray analysis reveals that complex (1) crystallizes in space group P 2₁/c with a = 8.710(3), b = 14.720(5), c = 14.301(5) ?, α = 90, β = 105.801(14), γ = 90°. The complex [Mn₂(L)(H₂O)₄]Cl₂·6H₂O consists of two manganese(II) macrocyclic complexes in which two Mn(II) centers are linked by two triazolate units of the macrocyclic framework. Each manganese(II) ion is coordinated by five nitrogen atoms from the macrocycle and two oxygen atoms of the coordinated water. The manganese(II) center is in an approximately pentagonal-bipyramidal environment. The SOD activities of both complexes have also been investigated.     

Complexes with Hg(II) and macrocyclic ligands

The crystal structures of 1,4,7,10,13,16-hexaoxa-cyclooctadecane dicyano mercury(II) monohydrate, C₁₄H₂₄HgN₂O₆·H₂O, 1, and 2,5,8,11,18,21,24,27-octaoxa-tricyclo[26.4.0.0_12,17]-dotriconta-1(28),12,14,16,29,31-hexaene dicyano mercury(II) monohydrate, C₂₆H₃₂HgN₂O₈·H₂O, 2, were determined: 1 crystallizes in the trigonal space group R3¯ with cell dimensions a = 11.7842(1) and c = 12.0316(1) Å. 2 crystallizes in the monoclinic space group P2₁/c with cell dimensions a = 11.156(3) Å, b = 8.417(2), c = 30.901(8) Å, and = 93.279°. In spite of the different cyclic systems, similar complexes are formed where the Hg atom is coordinated by two CN groups and six oxygen atoms of the crown ether. The structure of 1 is isostructural with the crystal structures of 18C6—HgCl₂, 18C6—CdBr₂, 18C6—Sr(BH₄)₂, and 18C6—Ba(BH₄)₂. Furthermore, 1 is very similar to other 18C6—HgX₂ complexes.