Cyclic polypeptides by thermal polymerization of α‐amino acid N‐carboxyanhydrides

The NCAs of the following five amino acids were polymerized in bulk at 120 °C without addition of a catalyst or initiator: sarcosine (Sar), L ‐alanine (L ‐Ala), D ,L ‐phenylalanine (D ,L ‐Phe), D ,L ‐leucine (D ,L ‐Leu) and D ,L ‐valine (D,L ‐Val). The virgin reaction products were characterized by viscosity measurements ¹³C NMR spectroscopy and MALDI‐TOF mass spectrometry. In addition to numerous low molar mass byproducts cyclic polypeptides were formed as the main reaction products in the mass range above 800 Da. Two types of cyclic oligo‐ and polypeptides were detected in all cases with exception of sarcosine NCA, which only yielded one class of cyclic polypeptides. The efficient formation of cyclic oligo‐ and polypeptides explains why high molar mass polymers cannot be obtained by thermal polymerizations of α‐amino acid NCAs. Various polymerization mechanisms were discussed. © 2008 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 46: 4012–4020, 2008     

Tertiary amine catalyzed polymerizations of α‐amino acid N‐carboxyanhydrides: The role of cyclization

Sarcosine N‐carboxyanhydride, D,L ‐alanine N‐carboxyanhydride, D,L ‐phenylalanine N‐carboxyanhydride, and D,L ‐leucine N‐carboxyanhydride were polymerized with pyridine or N‐ethyldiisopropylamine as the catalyst. With pyridine, cyclic oligo‐ and polypeptides were obtained in addition to water‐initiated or water‐terminated chains. The cyclopeptides were the main products in the case of sarcosine N‐carboxyanhydride and D,L ‐phenylalanine N‐carboxyanhydride. The fraction of cycles was particularly high when N‐methylpyrrolidone was used as the reaction medium. These results suggested the existence of a pyridine‐catalyzed zwitterionic mechanism. However, cyclopeptides were also obtained with N‐ethyldiisopropylamine as the catalyst. In this case, N‐deprotonation of N‐carboxyanhydrides, followed by the formation of N‐acyl N‐carboxyanhydride chain ends, was the most likely initiation mechanism. Various chain‐growth mechanisms were examined. In the case of γ‐benzyl ester‐L ‐glutamate N‐carboxyanhydride, side reactions such as the formation of pyroglutamoyl end groups were detected. © 2006 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 44: 4680–4695, 2006     

Ring opening polymerization of α‐amino acid N‐carboxyanhydrides catalyzed by rare earth catalysts: Polymerization characteristics and mechanism

Five rare earth complexes are first introduced to catalyze ring opening polymerizations (ROPs) of γ‐benzyl‐L ‐glutamate N‐carboxyanhydride (BLG NCA) and L ‐alanine NCA (ALA NCA) including rare earth isopropoxide (RE(OiPr)₃), rare earth tris(2,6‐di‐tert‐butyl‐4‐methylphenolate) (RE(OAr)₃), rare earth tris(borohydride) (RE(BH₄)₃(THF)₃), rare earth tris[bis(trimethylsilyl)amide] (RE(NTMS)₃), and rare earth trifluoromethanesulfonate. The first four catalysts exhibit high activities in ROPs producing polypeptides with quantitative yields (>90%) and moderate molecular weight (MW) distributions ranging from 1.2 to 1.6. In RE(BH₄)₃(THF)₃ and RE(NTMS)₃ catalytic systems, MWs of the produced polypeptides can be controlled by feeding ratios of monomer to catalyst, which is in contrast to the systems of RE(OiPr)₃ and RE(OAr)₃ with little controllability over the MWs. End groups of the polypeptides are analyzed by MALDI‐TOF MS and polymerization mechanisms are proposed accordingly. With ligands of significant steric hindrance in RE(OiPr)₃ and RE(OAr)₃, deprotonation of 3‐NH of NCA is the only initiation mode producing a N‐rare earth metallated NCA ( i ) responsible for further chain growth, resulting in α‐carboxylic‐ω‐aminotelechelic polypeptides after termination. In the case of RE(BH₄)₃(THF)₃ with small ligands, another initiation mode at 5‐CO position of NCA takes place simultaneously, resulting in α‐hydroxyl‐ω‐aminotelechelic polypeptides. In RE(NTMS)₃ system, the protonated ligand hexamethyldisilazane (HMDS) initiates the polymerization and produces α‐amide‐ω‐aminotelechelic polypeptides. © 2011 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2012     

Polymerization of α‐amino acid N‐carboxyanhydrides catalyzed by rare earth tris(borohydride) complexes: Mechanism and hydroxy‐endcapped polypeptides

In this work, rare earth tris(borohydride) complexes, Ln(BH₄)₃(THF)₃ (Ln = Sc, Y, La, and Dy), have been used to catalyze the ring‐opening polymerization of γ‐benzyl‐L ‐glutamate N‐carboxyanhydride (BLG NCA). All the catalysts show high activities and the resulting poly(γ‐benzyl‐L ‐glutamate)s (PBLGs) are recovered with high yields (≥90%). The molecular weights (MWs) of PBLG can be controlled by the molar ratios of monomer to catalyst, and the MW distributions (MWDs) are relatively narrow (as low as 1.16) depending on the rare earth metals and reaction temperatures. Block copolypeptides can be easily synthesized by the sequential addition of two monomers. The obtained P(γ‐benzyl‐L ‐glutamate‐b‐ε‐carbobenzoxy‐L ‐lysine) [P(BLG‐b‐BLL)] and P(γ‐benzyl‐L ‐glutamate‐b‐alanine) [P(BLG‐b‐ALA)] have been well characterized by NMR, gel permeation chromatography, and differential scanning calorimetry measurements. A random copolymer P(BLG‐co‐BLL) with a narrow MWD of 1.07 has also been synthesized. The polymerization mechanisms have been investigated in detail. The results show that both nucleophilic attack at the 5‐CO of NCA and deprotonation of 3‐NH of NCA in the initiation process take place simultaneously, resulting in two active centers, that is, an yttrium ALA carbamate derivative [H₂BOCH₂(CH)NHC(O)OLn? ] and a N‐yttriumlated ALA NCA. Propagation then proceeds on these centers via both normal monomer insertion and polycondensation. After termination, two kinds of telechelic polypeptide chains, that is, α‐hydroxyl‐ω‐aminotelechelic chains and α‐carboxylic‐ω‐aminotelechelic ones, are formed as characterized by MALDI‐TOF MS, ¹H NMR, ¹³C NMR, ¹H–¹H COSY, and ¹H–¹³C HMQC measurements. By decreasing the reaction temperature, the normal monomer insertion pathway can be exclusively selected, forming an unprecedented α‐hydroxyl‐ω‐aminotelechelic polypeptide. © 2012 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2012     

Living polymerization of α‐amino acid‐N‐carboxyanhydrides

This article reviews recent developments in the polymerization of α‐amino acid‐ N‐carboxyanhydrides (NCAs) to form polypeptides. Traditional methods used to polymerize these monomers are described, and limitations in the utility of these systems for the preparation of polypeptides with controlled molecular weights and narrow molecular weight distributions are discussed. The development of transition‐metal‐based initiators, which activate the monomers to form covalent active species, permits the formation of polypeptides via the living polymerization of NCAs. In these systems, polymer molecular weights are controlled by monomer‐to‐initiator stoichiometry, polydispersities are low, and block copolypeptides can be prepared. The scope and limitations of these initiators and their key features and mode of operation are described in detail in this highlight. © 2000 John Wiley & Sons, Inc. J Polym Sci A: Polym Chem 38: 3011–3018, 2000     

Synthesis and ring‐opening (co)polymerization of L‐lysine N‐carboxyanhydrides containing labile side‐chain protective groups

This contribution describes the synthesis and ring‐opening (co)polymerization of several L ‐lysine N‐carboxyanhydrides (NCAs) that contain labile protective groups at the ?‐NH₂ position. Four of the following L ‐lysine NCAs were investigated: N^?‐trifluoroacetyl‐L ‐lysine N‐carboxyanhydride, N^?‐(tert‐butoxycarbonyl)‐L ‐lysine N‐carboxyanhydride, N^?‐(9‐fluorenylmethoxycarbonyl)‐L ‐lysine N‐carboxyanhydride, and N^?‐(6‐nitroveratryloxycarbonyl)‐L ‐lysine N‐carboxyanhydride. In contrast to the harsh conditions that are required for acidolysis of benzyl carbamate moieties, which are usually used to protect the ?‐NH₂ position of L ‐lysine during NCA polymerization, the protective groups of the L ‐lysine NCAs presented here can be removed under mildly acidic or basic conditions or by photolysis. As a consequence, these monomers may allow access to novel peptide hybrid materials that cannot be prepared from ?‐benzyloxycarbonyl‐L ‐lysine N‐carboxyanhydride (Z‐Lys NCA) because of side reactions that accompany the removal of the Z groups. By copolymerization of these L ‐lysine NCAs with labile protective groups, either with each other or with γ‐benzyl‐L ‐glutamate N‐carboxyanhydride or Z‐Lys NCA, orthogonally side‐chain‐protected copolypeptides with number‐average degrees of polymerization ≤20 were obtained. Such copolypeptides, which contain different side‐chain protective groups that can be removed independently, are interesting for the synthesis of complex polypeptide architectures or can be used as scaffolds for the preparation of synthetic antigens or protein mimetics. © 2003 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 41: 1167–1187, 2003     

Deprotonation reaction of α‐amino acid N‐carboxyanhydride at 4‐CH position by yttrium tris[bis(trimethylsilyl)amide]

Reaction of yttrium tris[bis(trimethylsilyl)amide] [(TMSN)₃Y] with equivalent L ‐alanine N‐carboxyanhydride (ALA NCA) yields yttrium α‐isocyanato carboxylate ( II ), yttrium ketenyl carbamate ( III ), and hexamethyldisilazane ( V ). The products indicate that 4‐CH group of ALA NCA monomer is deprotonated in addition to 3‐NH group, which has been neglected in NCA chemistry for decades. This result proves the acidity of 4‐CH in NCA and provides the first direct evidence for racemization phenomenon of NCA in strong base in microscopic aspect. Rare earth tris[bis(trimethylsilyl)amide] (TMSN)₃Ln (Ln = Sc, Y, La, Dy, and Lu) compounds are high efficient catalysts for ring‐opening polymerizations of NCAs. Polypeptides can be produced in quantitative yields with narrow molecular weight distributions below 1.3, and block copolypeptides can be facilely prepared by sequential addition method. © 2012 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2012     

Four oxoindole‐linked α‐alkoxy‐β‐amino acid derivatives

Four structures of oxoindolyl α‐hydroxy‐β‐amino acid derivatives, namely, methyl 2‐{3‐[(tert‐butoxycarbonyl)amino]‐1‐methyl‐2‐oxoindolin‐3‐yl}‐2‐methoxy‐2‐phenylacetate, C₂₄H₂₈N₂O₆, (I), methyl 2‐{3‐[(tert‐butoxycarbonyl)amino]‐1‐methyl‐2‐oxoindolin‐3‐yl}‐2‐ethoxy‐2‐phenylacetate, C₂₅H₃₀N₂O₆, (II), methyl 2‐{3‐[(tert‐butoxycarbonyl)amino]‐1‐methyl‐2‐oxoindolin‐3‐yl}‐2‐[(4‐methoxybenzyl)oxy]‐2‐phenylacetate, C₃₁H₃₄N₂O₇, (III), and methyl 2‐[(anthracen‐9‐yl)methoxy]‐2‐{3‐[(tert‐butoxycarbonyl)amino]‐1‐methyl‐2‐oxoindolin‐3‐yl}‐2‐phenylacetate, C₃₈H₃₆N₂O₆, (IV), have been determined. The diastereoselectivity of the chemical reaction involving α‐diazoesters and isatin imines in the presence of benzyl alcohol is confirmed through the relative configuration of the two stereogenic centres. In esters (I) and (III), the amide group adopts an anti conformation, whereas the conformation is syn in esters (II) and (IV). Nevertheless, the amide group forms intramolecular N—H...O hydrogen bonds with the ester and ether O atoms in all four structures. The ether‐linked substituents are in the extended conformation in all four structures. Ester (II) is dominated by intermolecular N—H...O hydrogen‐bond interactions. In contrast, the remaining three structures are sustained by C—H...O hydrogen‐bond interactions.     

A New Route to N‐Aryl 2‐Alkenamides,N‐Allyl N‐Aryl 2‐Alkenamides,and N‐Aryl α,β‐Unsaturated γ‐Lactams from N‐Aryl 3‐(Phenylsulfonyl)propanamides

A series of N‐aryl 2‐alkenamides were produced efficiently by treating N‐aryl 3‐(phenylsulfonyl)‐propanamides with potassium tert‐butoxide in THF at 0°C. With out isolation, it was further treated with an additional equivalent of potassium tert‐butoxide and allyl bromide to give N‐allyl N‐aryl 2‐alkenamides in one pot in good yields. Followed by a ring‐closing metathesis reaction, these N‐allyl N‐aryl 2‐alkenamides were respectively converted into corresponding N‐aryl α,β‐unsaturated γ‐lactams in moderate yields.     

Studies on the Mass Spectra of N‐Aryl α,β‐Unsaturated γ‐Lactams

The mass spectra of a series of N‐aryl α,β‐unsaturated γ‐lactams were studied. Besides the molecular ion, the three characteristic fragments such as [M⁺‐29], [M⁺‐55], and [M⁺‐82] were commonly found in a series of N‐Aryl α,β‐unsaturated γ‐lactams in EI/MS. Further more the mechanism for the interpretation of these fragments is also de scribed.     

Synthesis,structural characterization and cytotoxic activity of diorganotin(IV) complexes of N‐(5‐halosalicylidene)‐α‐amino acid

Fourteen new diorganotin(IV) complexes of N‐(5‐halosalicylidene)‐α‐amino acid, R′₂Sn(5‐X‐2‐OC₆H₃CH?NCHRCOO) (where X = Cl, Br; R = H, Me, i‐Pr; R′ = n‐Bu, Ph, Cy), were synthesized by the reactions of diorganotin halides with potassium salt of N‐(5‐halosalicylidene)‐α‐amino acid and characterized by elemental analysis, IR and NMR (¹H, ¹³C and ¹¹⁹Sn) spectra. The crystal structures of Bu₂Sn(5‐Cl‐2‐OC₆H₃CH?NCH(i‐Pr)COO) and Ph₂Sn(5‐Br‐2‐OC₆H₃CH?NCH(i‐Pr)COO) were determined by X‐ray single‐crystal diffraction and showed that the tin atoms are in a distorted trigonal bipyramidal geometry and form five‐ and six‐membered chelate rings with the tridentate ligand. Bioassay results of a few compounds indicated that the compounds have strong cytotoxic activity against three human tumour cell lines, i.e. HeLa, CoLo205 and MCF‐7, and the activity decreased in the order Cy>n‐Bu>Ph for the R′ group bound to tin. Copyright © 2005 John Wiley & Sons, Ltd.     

CuI/amino acid catalysis in coupling and cyclization of β‐bromo‐α,β‐unsaturated carboxylic acids with terminal alkynes leading to alkylidenefuranones

β‐Bromo‐α,β‐unsaturated carboxylic acids are coupled and cyclized with terminal alkynes in DMF at 110°C in the presence of a catalytic amount of CuI and amino acid along with a base to give alkylidenefuranones in good yields. Similar reaction under microwave irradiation also gave alkylidenefuranones in higher yields. Copyright © 2013 John Wiley & Sons, Ltd.     

CuI/amino acid‐catalyzed coupling and cyclization of β‐bromo‐α,β‐unsaturated amides with terminal alkynes leading to (3Z)‐3‐alkylidenepyrrol‐1‐ones

β‐Bromo‐α,β‐unsaturated amides are coupled and cyclized with terminal alkynes in DMF at 110 °C in the presence of a catalytic amount of CuI and amino acid along with a base to give the corresponding (3Z)‐3‐alkylidenepyrrol‐1‐ones in moderate to good yields. Copyright © 2013 John Wiley & Sons, Ltd.     

Polycondensation of α‐amino acid esters in the presence of yttrium triflate as a Lewis acid

To develop polycondensation methods for poly(α‐amino acid)s, we describe a first examination to use yttrium triflate as a Lewis acid for polycondensation of α‐amino acid esters. In the absence of Lewis acid, no polycondensation of 2‐methoxyphenyl glycinate ( 1b ) at room temperature proceeded. While the polycondensation of 1b was carried out with 5 mol % yttrium triflate, a condensation product of glycine was obtained in 16% yield. Although polycondensation of 4‐nitrophenyl L ‐leucinate ( 1c ) and 4‐nitrophenyl L ‐valinate ( 1d ) were also promoted with 5 mol % yttrium triflate, the condensation products of both α‐amino acid esters were obtained in only a few percent yield. When 1d was polymerized in the presence of 100 mol % yttrium triflate, high molecular weight poly(L ‐valine) was obtained in 91% yield. © 2006 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 44: 4731–4735, 2006     

Radical‐initiated polymerization of β‐methyl‐α‐methylene‐γ‐butyrolactone

β‐Methyl‐α‐methylene‐γ‐butyrolactone (MMBL) was synthesized and then was polymerized in an N,N‐dimethylformamide (DMF) solution with 2,2‐azobisisobutyronitrile (AIBN) initiation. The homopolymer of MMBL was soluble in DMF and acetonitrile. MMBL was homopolymerized without competing depolymerization from 50 to 70 °C. The rate of polymerization (R_p) for MMBL followed the kinetic expression R_p = [AIBN]^0.54[MMBL]^1.04. The overall activation energy was calculated to be 86.9 kJ/mol, k_p/k_t^1/2 was equal to 0.050 (where k_p is the rate constant for propagation and k_t is the rate constant for termination), and the rate of initiation was 2.17 × 10^?8 mol L^?1 s^?1. The free energy of activation, the activation enthalpy, and the activation entropy were 106.0, 84.1, and 0.0658 kJ mol^?1, respectively, for homopolymerization. The initiation efficiency was approximately 1. Styrene and MMBL were copolymerized in DMF solutions at 60 °C with AIBN as the initiator. The reactivity ratios (r₁ = 0.22 and r₂ = 0.73) for this copolymerization were calculated with the Kelen–Tudos method. The general reactivity parameter Q and the polarity parameter e for MMBL were calculated to be 1.54 and 0.55, respectively. © 2003 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 41: 1759–1777, 2003     

Palladium‐catalyzed carbonylative cyclization of β‐bromo‐α,β‐unsaturated carboxylic acids with primary amines leading to N‐alkylmaleimides

Cyclic β‐bromo‐α,β‐unsaturated carboxylic acids are carbonylatively cyclized with primary amines under carbon monoxide pressure in MeCN in the presence of a catalytic amount of PdCl₂(PPh₃)₂ to give N‐alkylmaleimides. Copyright © 2012 John Wiley & Sons, Ltd.     

Phosphoryl group differentiating α‐amino acids from β‐ and γ‐amino acids in prebiotic peptide formation

In recent years β‐amino acids have increased their importance enormously in defining secondary structures of β‐peptides. Interest in β‐amino acids raises the question: Why and how did nature choose α‐amino acids for the central role in life? In this article we present experimental results of MS and ³¹P NMR methods on the chemical behavior of N‐phosphorylated α‐alanine, β‐alanine, and γ‐amino butyric acid in different solvents. N‐Phosphoryl α‐alanine can self‐assemble to N‐phosphopeptides either in water or in organic solvents, while no assembly was observed for β‐ or γ‐amino acids. An intramolecular carboxylic–phosphoric mixed anhydride (IMCPA) is the key structure responsible for their chemical behaviors. Relative energies and solvent effects of three isomers of IMCPA derived from α‐alanine (2a–c), with five‐membered ring, and five isomers of IMCPA derived from β‐alanine (4a–e), with six‐membered ring, were calculated with density functional theory at the B3LYP/6‐31G** level. The lower relative energy (3.2 kcal/mol in water) of 2b and lower energy barrier for its formation (16.7 kcal/mol in water) are responsible for the peptide formation from N‐phosphoryl α‐alanine. Both experimental and theoretical studies indicate that the structural difference among α‐, β‐, and γ‐amino acids can be recognized by formation of IMCPA after N‐phosphorylation. © 2003 Wiley Periodicals, Inc. Int J Quantum Chem 94: 232–241, 2003     

Optimization of an α‐(Amino acid)‐N‐carboxyanhydride polymerization using the high vacuum technique: Examining the effects of monomer concentration,polymerization kinetics,polymer molecular weight,and monomer purity

l ‐Ornithine‐based poly(peptides) have been widely utilized in the field of drug delivery, however few studies have been conducted examining the details of polymerization. In this article, the effects of monomer concentration, polymerization kinetics, polymer molecular weight and monomer purity were investigated using l ‐carboxybenzyl (Cbz)‐ornithine as a model monomer. The mechanism of polymerization herein follows the normal amine mechanism to produce poly(peptides) having controlled molecular weights, known chain ends and a narrow polydispersity index (PDI). A preferred monomer concentration range was determined, which required minimal polymerization times and allowed for predictable and reproducible molecular weights with narrow PDIs. The impact of monomer purity on the polymerization was established and monomer purification conditions are reported, which produce high‐purity monomer after a single recrystallization. Additionally, the optimized polymerization conditions and monomer purification protocol were combined with a sequential monomer addition technique to produce high molecular weight poly(ornithine) with a narrow PDI and known chain ends. © 2014 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2014 , 52, 1385–1391     

Synthesis,characterization and biological activity of diphenyltin(IV) complexes of N‐(3,5‐dibromosalicylidene)‐α‐amino acid and their diphenyltin dichloride adducts

Diphenyltin(IV) complexes of N‐(3,5‐dibromosalicylidene)‐α‐amino acid, Ph₂Sn[3,5‐Br₂‐2‐OC₆H₂ CH?NCH(R)COO] (where R = H, Me, i‐Pr, Bz), and their 1:1 adducts with diphenyltin dichloride, Ph₂Sn[3,5‐Br₂‐2‐OC₆H₂CH?NCH(R)COO]·Ph₂SnCl₂, have been synthesized and characterized by elemental analysis, IR and NMR (¹H, ¹³C and ¹¹⁹Sn) spectra. The crystal structure of Ph₂Sn[3,5‐Br₂‐2‐OC₆H₂CH?NCH(i‐Pr)COO] shows a distorted trigonal bipyramidal geometry with the axial locations occupied by a carboxylate–oxygen and a phenolic–oxygen atom of the ligand, and that of Ph₂Sn[3,5‐Br₂‐2‐OC₆H₂CH?NCH(i‐Pr)COO]·Ph₂SnCl₂ reveals that the two tin atoms are joined via the carbonyl atom of the ligand to form a mixed organotin binuclear complex. Bioassay indicates that the compounds possess better cytotoxic activity against three human tumor cell lines (HeLa, CoLo205 and MCF‐7) than cis‐platin and moderate antibacterial activity against two bacteria (E. coli and S. aureus). Copyright © 2005 John Wiley & Sons, Ltd.