The dithianyl group as a synthon in porphyrin chemistry: condensation reactions and preparation of formylporphyrins under basic conditions

Vilsmeier formylation is one of the most widely used substitution reactions for the functionalization of porphyrins. However, its utility is limited by the electrophilic/acidic reaction conditions, deactivation of the aromatic system and regiochemical problems, the requirement for metal complexes and necessity for subsequent demetalation under harsh conditions, and low functional group tolerance. To overcome these limitations, the dithianyl group has been utilized as a latent formyl synthon in porphyrin chemistry. 2-Formyl-1,3-dithiane can be used directly in pyrrole condensation reactions to regioselectively yield porphyrins with up to four dithianyl residues. Likewise, 5-dithianyldipyrromethane could be prepared quantitatively as a key building block for various porphyrin condensation reactions yielding the respective free base formylporphyrins after deprotection. Additionally, dithianyllithium can be used as a reagent for the direct aromatic substitution of metallo- and free base porphyrins under nucleophilic conditions.     

Origin of the bathochromically shifted optical spectra of meso-tetrathien-2'- and 3'-ylporphyrins as compared to meso-tetraphenylporphyrin

The UV-Vis and fluorescence spectra of free base and diprotonated meso-tetrathien-2'-ylporphyrins are, when compared to the spectra of meso-tetra-phenyl- or even -thien-3'-ylporphyrins, characterized by surprisingly large red-shifts. A comparison of the optical spectra and the computed rotational barriers for these meso-aryl-substituted porphyrins and a detailed conformational analysis of the single crystal X-ray structure of a diprotonated meso-tetrathien-2'-ylporphyrin suggest that the origin of the altered electronic properties of meso-tetrathien-2'-ylporphyrins are mainly due to the contribution of conformations in which the thienyl groups adopt idealized co-planar arrangements with the porphyrin ring. These conformations allow an efficient extension of the porphyrinic pi-system through conjugation. We synthesized a meso-tetrathien-2'-ylporphyrin with methyl groups in the o-position, thus preventing the formation of conformers with co-planar thienyl groups and a corresponding thien-2'-ylporphyrin with methyl substituents in a distal position that possesses the same steric requirements for thienyl group rotation as the parent compound, to conclusively deduce the influence of the conformers on the electronic structure. A MNDO-PSDCI computation of their optical spectra further supports our key hypothesis. DFT computations of the total energies of the hypothetical diprotonated thien-2'-ylporphyrin conformer with perpendicular thienyl groups and the conformer containing near-co-planar thienyl groups quantify the resonance stabilization energy. Our results support and complement recent photophysical and theoretical studies by Gupta and Ravikanth and Friedlein et al. on thien-2'-yl-substituted core-modified porphyrins and [meso-tetra(5'-bromothien-2'-yl)porphyrinato]Zn(ii), respectively.     

Influence of the core conformation on the NH-tautomerism in porphyrins: a study of meso-(1,3-dithian-2-yl)porphyrins

In order to investigate the mechanism of the NH-tautomerism in porphyrins, three meso-dithianyl-substituted porphyrins of different substitution pattern were studied theoretically. The corresponding trans-, cis- and saddle-point geometries were optimized with DFT methods, and the macrocyclic conformations obtained were analyzed using normal-structure-decomposition (NSD) analysis. Special attention was given to the influence of the participating out-of-plane and in-plane conformations on the NH-tautomerism, and the interplay of substituents, core conformations and energies of the transition-state structures was critically evaluated. The calculated energy barriers of the preferred pathways are compared with experimental activation enthalpies determined by variable-temperature (VT) NMR spectroscopy.     

Probing the Rotational Dynamics of meso‐(2‐Substituted)aryl Substituents in A2B‐Type Subporphyrins

A₂B‐type B‐methoxy subporphyrins 3 a – g and B‐phenyl subporphyrins 7 a – c , e , g bearing meso‐(2‐substituted)aryl substituents are synthesized, and their rotational dynamics are examined through variable‐temperature (VT) ¹H NMR spectroscopy. In these subporphyrins, the rotation of meso‐aryl substituents is hindered by a rationally installed 2‐substituent. The rotational barriers determined are considerably smaller than those reported previously for porphyrins. Comparison of the rotation activation parameters reveals a variable contribution of ΔH^≠ and ΔS^≠ in ΔG^≠. 2‐Methyl and 2‐ethyl groups of the meso‐aryl substituents in subporphyrins 3 e , 3 f , and 7 e induce larger rotational barriers than 2‐alkoxyl substituents. The rotational barriers of 3 g and 7 g are reduced by the presence of the 4‐dibenzylamino group owing to its ability to stabilize the coplanar rotation transition state electronically. The smaller rotational barriers found for B‐phenyl subporphyrins than for B‐methoxy subporphyrins indicate a negligible contribution of S_N1‐type heterolysis in the rotation of meso‐aryl substituents.     

meso-Trifluoromethyl-substituted expanded porphyrins

A series of meso-trifluoromethyl-substituted expanded porphyrins, including N-fused [24]pentaphyrin 3, [28]hexaphyrin 4, [32]heptaphyrin 5, [46]decaphyrin 6, and [56]dodecaphyrin 7, were synthesized by means of an acid-catalyzed one-pot condensation reaction of 2-(2,2,2-trifluoro-1-hydroxyethyl)pyrrole (1) as the first examples bearing meso-alkyl substituents. Besides these products, porphyrin 2 and two calix[5]phyrins 8 and 9 were also obtained. [28]Hexaphyrin 4 was quantitatively oxidized to [26]hexaphyrin 14 with MnO(2). These expanded porphyrins have been characterized by mass spectrometry, (1)H and (19)F NMR spectroscopy, and UV/Vis spectroscopy. The single-crystal structures have been determined for 3, 4, 6, 7, and 14. The N-fused [24]pentaphyrin 3 displays a distorted structure containing a tricyclic fused moiety that is similar to those of meso-aryl-substituted counterparts, whereas 8 and 9 are indicated to take roughly planar conformations with an inverted pyrrole opposite to the sp(3)-hybridized meso-carbon atom. Both [28]- and [26]hexaphyrins 4 and 14 have figure-of-eight structures. Solid-state structures of the decaphyrin 6 and dodecaphyrin 7 are remarkable, exhibiting a crescent conformation and an intramolecular two-pitch helical conformation, respectively.     

C–N rotational barriers in aromatically substituted styrylformamides: an AM1 study utilizing the conductor like screening model for real solvents

Semi-empirical calculations at the AM1 level utilizing the Conductor Like Screening Model for Real Solvents (COSMO-RS) are performed on a series of styrylformamides in their E, Z and transition state conformations to determine barriers to rotation (BIR) about the amide bond. Comparison is made with experimental data from two-dimensional exchange correlation spectroscopy NMR experiments (2D EXSY). Equilibrium and transition state structures are analyzed to explain the observed decrease in rotational barriers with electron withdrawing substituents. Calculations of nonexperimentally determined structures are performed to predict rotational barriers. The theoretically observed trends correspond well with chemical intuition.     

Synthesis and conformational studies of chiral meso-(α,β-unsaturated)-porphyrins

We describe a method to improve the yield and the kinetics of the difficult syntheses of α,β-unsaturated porphyrins, which enabled us to obtain a new chiral porphyrin derived from (S)-(−)-perillaldehyde in a 6% yield. Variable temperature NMR experiments on the free base, the zinc(II) and the nickel(II) complexes showed that two distinct and consecutive dynamic processes linked with the meso substituents rotation occurred. These processes can be analyzed as an evolution of the conformer composition upon temperature change. Higher values are found for the free energies of rotation of the substituent (measured by variable temperature ¹H NMR) compared to those of other equivalent porphyrins like meso-tetraphenyl porphyrin or meso-tetracyclohexyl porphyrin.     

Synthesis, characterization and spectral properties of substituted tetraphenylporphyrin iron chloride complexes

A series of substituted tetraphenylporphyrin iron chloride complexes [RTPPFe(III)Cl, R=o/p-NO?, o/p-Cl, H, o/p-CH?, o/p-OCH?] were synthesized by a novel universal mixed-solvent method and the spectral properties of free base porphyrins and iron porphyrin compounds were compared with each other. The experimental results showed that the one-pot mixed solvent method was superior to the two-step method in the yields, reaction time and workup of reaction mixtures for the synthesis of iron porphyrin compounds. The highest yields (28.7%-40.4%) of RTPPFe(III)Cl were obtained in the mixed solvents propionic acid, glacial acetic acid and m-nitrotoluene under reflux for 2 h. A detailed analysis of ultraviolet-visible (UV-vis), infrared (IR) and far-infrared (FIR) spectra suggested the transformation from free base porphyrins to iron porphyrins. The red shift of the Soret band in ultraviolet-visible spectra due to the presence of p-nitrophenyl substituents and the blue shift of Fe-Cl bond of TPPFeCl in far-infrared spectra were further explained by the electron transfer and molecular planarity in the porphyrin ring.     

金属卟啉催化下环己烷羟基化反应中的Hammett关系

合成了40个卟啉环上具有不同取代基的单铁、锰卟啉和u-氧桥连双铁、锰卟啉,研究了这些金属卟啉模拟细胞色素P－450单充氧酶在温和条件下催化环己烷羟基化的反应.首次用线性自由能关系对金属卟啉仿生催化反应和金属卟啉自氧化反应进行相关分析,获得一些新的结果和规律.在此基础上,对金属卟啉仿生催化反应的可能机理进行了探讨.     

Swallowtail porphyrins: synthesis, characterization and incorporation into porphyrin dyads

The incorporation of symmetrically branched tridecyl ("swallowtail") substituents at the meso positions of porphyrins results in highly soluble building blocks. Synthetic routes have been investigated to obtain porphyrin building blocks bearing 1-4 swallowtail groups. Porphyrin dyads have been synthesized in which the zinc or free base (Fb) porphyrins are joined by a 4,4'-diphenylethyne linker and bear swallowtail (or n-pentyl) groups at the nonlinking meso positions. The swallowtail-substituted Zn(2)- and ZnFb-dyads are readily soluble in common organic solvents. Static absorption and fluorescence spectra and electrochemical data show that the presence of the swallowtail groups slightly raises the energy level of the filled a(2u)(pi) HOMO. EPR studies of the pi-cation radicals of the swallowtail porphyrins indicate that the torsional angle between the proton on the alkyl carbon and p-orbital on the meso carbon of the porphyrin is different from that of a porphyrin bearing linear pentyl groups. Regardless, the swallowtail substituents do not significantly affect the photophysical properties of the porphyrins or the electronic interactions between the porphyrins in the dyads. In particular, time-resolved spectroscopic studies indicate that facile excited-state energy transfer occurs in the ZnFb dyad, and EPR studies of the monocation radical of the Zn(2)-dyad show that interporphyrin ground-state hole transfer is rapid.     

Structural and pathway complexity of beta-strand reorganization within aggregates of human transthyretin(105-115) peptide

Interstrand conformational rearrangements of human transthyretin peptide (TTR(105-115)) within dimeric aggregates were simulated by means of molecular dynamics (MD) with implicit solvation model for a total length of 48 micros. The conformations sampled in the MD simulations were clustered to identify free energy minima without any projections of free energy surface. A connected graph was constructed with nodes (=clusters) and edges corresponding to free energy minima and transitions between nodes, respectively. This connected graph which reflects the complexity of the free energy surface was used to extract the transition disconnectivity graph, which reflects the overall free energy barriers between pairs of free energy minima but does not contain information on transition paths. The routes of transitions between important free energy minima were obtained by further processing the original graph and the MD data. We have found that both parallel and antiparallel aggregates are populated. The parallel aggregates with different alignment patterns are separated by nonnegligible free energy barriers. Multiroutes exist in the interstrand conformational reorganization. Most visited routes do not dominant the kinetics, while less visited routes contribute a little each but they are numerous and their total contributions are actually dominant. There are various kinds of reptation motions, including those through a beta-bulge, side-chain aided reptation, and flipping or rotation of a hairpin formed by one strand.     

Free energy surfaces for the alpha(1 --> 4)-glycosidic linkage: implications for polysaccharide solution structure and dynamics

We present a potential of mean force surface for rotation about phi and psi dihedral angles of the alpha(1 --> 4)-glycosidic linkage in the maltose disaccharide (4-O-alpha-d-glucopyranosyl-d-glucopyranose) in aqueous solution. Comparison of the vacuum and solution free energy surfaces for maltose shows the principal effects of water to be an increase in the rotational freedom of the alpha(1 --> 4) linkage brought about by lowering the energy barrier for syn to anti conformational changes as well as expansion of the range of low-energy phi,psi conformations. This free energy analysis thus provides a thermodynamic and conformational rationale for the effects of water on alpha(1 --> 4)-linked polysaccharides and carbohydrate glasses.     

Conformational flexibility of metalloporphyrins studied by density-functional calculations

Reliable energetic data on the conformational flexibility of organic molecules are important ingredients to better understand the adsorption of such molecules on solid surfaces. Herein, the conformational flexibility of the phenyl substituents in metallo tetraphenyl porphyrins (M-TPP, M = Zn, Co) and metallo tert-butyl tetraphenyl porphyrins (M-TTBPP, M = Zn, Co) has been studied in detail for the first time using density-functional methods. For each molecule, a relaxed two-dimensional potential energy surface scan has been calculated for the two angles describing the rotation and the out-of-plane bending of the phenyl substituents. The results quantify that the molecules are rather flexible close to the energetic minimum while more extreme twisting or tilting of the phenyl substituents results in high-energy deformations of the porphyrin core from planarity due to steric repulsions of adjacent hydrogen atoms.     

A new route to meso-formyl porphyrins

Prior syntheses of porphyrins bearing meso-formyl groups have generally employed the Vilsmeier formylation of an acid-resistant copper or nickel porphyrin. A new approach for the synthesis of free base porphyrins bearing one or two (cis or trans) meso-formyl substituents entails the use of a dipyrromethane bearing an acetal group at the 5-position, a dipyrromethane-1-carbinol bearing an acetal group at the 5-position or carbinol position, or a dipyrromethane-1,9-dicarbinol bearing an acetal group at a carbinol position. Treatment of the resulting meso-acetal-substituted free base porphyrin to gentle acidic hydrolysis yields the corresponding meso-formyl porphyrin.     

Internal rotational motion of the chloromethyl group of the jet-cooled benzyl chloride molecule

The mass-resolved resonance enhanced two-photon ionization spectra of jet-cooled benzyl chloride were measured. Some low-frequency vibronic bands around the S1-S0 origin band were assigned to transitions of the internal rotational mode of the chloromethyl group. The internal rotational motion was analyzed by using the one-dimensional free rotor approximation. The conformation in the S1 state was found to be that in which the C-Cl bond lies in orthogonal to the benzene plane. For the species with m/e 126, the transition energy of the internal rotational bands corresponded well to the potential energy values of V2 = 1900 cm(-1) and V4 = 30 cm(-1) in the S1 state and the reduced rotational constant B values 0.50 and 0.47 cm(-1) in the S0 and S1 states, respectively. The B values obtained for the chlorine isotopomer (m/e 128) were slightly different. The S1 potential barrier height was found to be about 3 times larger than that for the S0 state. Molecular orbital calculations suggest that the difference between energies of the HOMO and LUMO with respect to the rotation of the chloromethyl group correspond approximately to the potential energy curve obtained for the S1 state.     

Noncovalent binding between fullerenes and protonated porphyrins in the gas phase

Noncovalent interactions between protonated porphyrin and fullerenes (C?? and C??) were studied with five different meso-substituted porphyrins in the gas phase. The protonated porphyrin-fullerene complexes were generated by electrospray ionization of the porphyrin-fullerene mixture in 3:1 dichloromethane/methanol containing formic acid. All singly protonated porphyrins formed the 1:1 complexes, whereas porphyrins doubly protonated on the porphine center yielded no complexes. The complex ion was mass-selected and then characterized by collision-induced dissociation with Xe. Collisional activation exclusively led to a loss of neutral fullerene, indicating noncovalent binding of fullerene to protonated porphyrin. In addition, the dissociation yield was measured as a function of collision energy, and the energy inducing 50% dissociation was determined as a measure of binding energy. Experimental results show that C?? binds to the protonated porphyrins more strongly than C??, and electron-donating substituents at the meso positions increase the fullerene binding energy, whereas electron-withdrawing substituents decrease it. To gain insight into π-π interactions between protonated porphyrin and fullerene, we calculated the proton affinity and HOMO and LUMO energies of porphyrin using Hartree-Fock and configuration interaction singles theory and obtained the binding energy of the protonated porphyrin-fullerene complex using density functional theory. Theory suggests that the protonated porphyrin-fullerene complex is stabilized by π-π interactions where the protonated porphyrin accepts π-electrons from fullerene, and porphyrins carrying bulky substituents prefer the end-on binding of C?? due to the steric hindrance, whereas those carrying less-bulky substituents favor the side-on binding of C??.     

Conformational preferences of proline oligopeptides

A conformational study on the terminally blocked proline oligopeptides, Ac-(Pro)(n)()-NMe(2) (n = 2-5), is carried out using the ab initio Hartree-Fock level of theory with the self-consistent reaction field method in the gas phase and in solutions (chloroform, 1-propanol, and water) to explore the preference and transition between polyproline II (PPII) and polyproline I (PPI) conformations depending on the chain length, the puckering, and the solvent. The mean differences in the free energy per proline of the up-puckered conformations relative to the down-puckered conformations for both diproline and triproline increases for the PPII-like conformations and decreases for the PPI-like conformations as the solvent polarity increases. These calculated results indicate that the PPII-like structures have preferentially all-down puckerings in solutions, whereas the PPI-like structures have partially mixed puckerings. The free energy difference per proline residue between the PPII- and PPI-like structures decreases as the proline chain becomes longer in the gas phase but increases as the proline chain becomes longer in solutions and the solvent polarity increases. In particular, our calculated results indicate that each of the proline oligopeptides can exist as an ensemble of conformations with the trans and cis peptide bonds in solutions, although the PPII-like structure with all-trans peptide bonds is dominantly preferred, which is reasonably consistent with the previously observed results. In diproline Ac-(Pro)(2)-NMe(2), the rotational barrier to the cis-to-trans isomerization for the first prolyl peptide bond increases as the solvent polarity increases, whereas the rotational barrier for the second prolyl peptide bond does not show the monotonic increase as the solvent polarity increases. When the rotational barriers for these two prolyl peptide bonds were compared, it could be deduced that the conformational transition from PPI with the cis peptide bond to PPII with the trans peptide bond is initiated at the C-terminus and proceeds to the N-terminus in water. This is consistent with the results from NMR experiments on polyproline in D(2)O but opposite to the results from enzymatic hydrolysis kinetics experiments on polyproline.     

Investigation of the scope of a new route to ABCD-bilanes and ABCD-porphyrins

A new route to bilanes and porphyrins bearing four distinct meso substituents has been studied to elucidate the scope and gain entry to previously inaccessible compounds. The route entails (i) synthesis of a 1-bromo-19-acylbilane by acid-catalyzed condensation of a 1-acyldipyrromethane and a 9-bromodipyrromethane-1-carbinol and (ii) intramolecular cyclization of the 1-bromo-19-acylbilane in the presence of a metal salt (MgBr2, 3 mol equiv) and a non-nucleophilic base (DBU, 10 mol equiv) in a noncoordinating solvent (toluene) at 115 degrees C exposed to air to afford the corresponding magnesium(II) porphyrin. In this study, two sets of bilanes were initially prepared to explore substituent effects. In the first set, all bilanes vary only in the nature of the substituent at the 10-position. In the second set, all bilanes vary only in the nature of the substituent attached to the acyl unit (the 20-position). The substituents examined at the 10- and 20-positions include alkyl, aryl (electron-rich, electron-deficient, hindered), heteroaryl, ester, or no substituent (-H). The bilanes were obtained in 35-87% yield, and the target porphyrins in up to 60% yield. Further study of the scope focused on bilanes and porphyrins bearing three heterocyclic substituents (o-, m-, p-pyridyl) or four alkyl groups (ethyl, propyl, butyl, pentyl), in which case microwave irradiation was used for the porphyrin-forming step. Altogether, 17 bilanes and 19 porphyrins were prepared and characterized. In summary, the new route provides access to meso-substituted bilanes and porphyrins for which access is limited via other methods.     

Imidazole and imidazolium porphyrins: gas‐phase chemistry of multicharged ions

Electrospray ionization mass spectrometry/mass spectrometry in the positive ion mode was used to investigate the gas‐phase chemistry of multicharged ions from solutions of porphyrins with 1,3‐dimethylimidazolium‐2‐yl (DMIM) and 1‐methylimidazol‐2‐yl (MIm) meso‐substituents. The studied compounds include two free bases and 12 complexes with transition metals (Cu(II), Zn(II), Mn(III), and Fe(III)). The observed multicharged ions are either preformed or formed during the electrospraying process by reduction or protonation and comprise closed‐shell and hypervalent mono‐radical and bi‐radical ions. The observed extensive and abundant fragmentation of the DMIM and MIm meso‐substituents is a characteristic feature of these porphyrins. Fragments with the same mass values can be lost from the meso‐substituents either as charged or neutral species and from closed‐shell and hypervalent radical ions. Reduction processes are observed for both the free bases and the metallated DMIM porphyrins and occur predominantly by formation of hypervalent radicals that fragment, at low energy collisions, by loss of methyl radicals with formation of the corresponding MIm functionalities. These findings confirm that, when using electrospray ionization, reduction is an important characteristic of cationic meso‐substituted tetrapyrrolic macrocycles, always occurring when delocalization of the formed hypervalent radicals is possible. For the Fe(III) and Mn(III) complexes, reduction of the metal centers is also observed as the predominant fragmentation of the corresponding reduced ions through losses of charged fragments testifies. The fragmentation of the closed‐shell ions formed by protonation of the MIm porphyrins mirrors the fragmentation of the closed‐shell ions of their DMIM counterparts. Copyright © 2014 John Wiley & Sons, Ltd.     

Diheteroarylmethanes. 6.(1) Probing the Electron-Withdrawing Rank of Heteroaryl Groups by Conformational Studies of Push-Pull Ethylenes. Isolation of NH-Enamine Tautomers of alpha,alpha-Diheteroarylacetaldehydes (Heteroaryl = 2-Benzoxazolyl, 2-Benzothiazolyl)

Enamines and enol ethers substituted in the beta position by the 2-benzoxazolyl and 2-benzothiazolyl group have been obtained by condensing dimethylformamide dimethyl acetal and ethyl orthoformate, respectively, with bis(2-benzoxazolyl)methane and bis(2-benzothiazolyl)methane. A dynamic NMR and semiempirical (PM3) investigation on rotational energy barriers has been carried out in order to rank the electron-withdrawing capacity of the heterocyclic rings. The NMR-based evaluation of the energy barriers corresponding to the rotation along the enaminic double bond has shown that the pi-electron-withdrawing power of benzothiazole is larger than that of benzoxazole, in full accord with previously obtained charge demand values based on (13)C and (15)N pi-charge/shift relationships. The NMR and the computational approaches have led to consistent results. The X-ray crystal structure of alpha,alpha-bis(2-benzothiazolyl)-beta-(dimethylamino)ethene shows that only one heteroaryl ring is coplanar with the enaminic double bond, while the second one is twisted by 73 degrees relative to such a plane. Moreover, in this case calculations closely reproduce the experimental results. In the calculated transition states corresponding to the rotational process along the enamine double bond, the two heteroaryl groups become coplanar and conjugation develops between the enaminic nitrogen electron pool and both heterocycles. The lower rotational barrier observed in the case of the 2-benzothiazolyl derivatives, with respect to the 2-benzoxazolyl derivatives, is therefore a direct consequence of the higher electron-withdrawing power of the former group. Furthermore, a stabilizing intramolecular nonbonded S.S interaction in the rotational transition state of the benzothiazolyl derivatives is evidenced by the calculations. An unprecedented isolation of the NH-enamine tautomer involving the benzoxazolyl and benzothiazolyl ring in alpha,alpha-diheteroacetaldehydes has been performed, confirming these heterocycles as strong electron-withdrawing substituents.