A 1H and 13C NMR study of a novel naturally occurring furocoumarin from Dorstenia cayapiaa

The chemical structure of a naturally occurring furocoumarin from Dorstenia cayapiaa (1) has been established by 1D and 2D NMR methods.     

Hexitol derivatives containing a 1,4-oxathiane ring—III : Rearrangement of a sulfone on treatment with LAH

Treatment of 2,5 - anhydro - 3,4 - di -O- mesyl - 1,6 - thioanhydro - D - glucitol S,S-dioxide (1) with LAH afforded (1S,6R)-2-thiabicyclo[4.1.0]heptane S,S-dioxide (2) and its (4R) - 4 -hydroxy derivative 3 in a ratio of 46:6. Sodium - dihydro - bis(2 - methoxy - ethoxy) - aluminate afforded the same compounds in a ratio of 15:22. The corresponding sulfide 5 underwent no rearrangement under similar conditions. The structure of the products was established by IR, PMR, CMR and MS. A probable reaction mechanism is discussed.     

Physalinol A,a 1,10-seco-physalin with an epidioxy from Physalis alkekengi L. var. franchetii (Mast.) Makino

Physalinol A (1), a novel 1, 10-seco-physalin with a peroxy bridge, was isolated from the organic extracts of Physalis alkekengi L. var. franchetii (Mast.) Makino. The structure was determined on the basis of 1D and 2D NMR spectra and HR-ESI-MS data. The absolute configuration of 1 was evidenced by X-ray diffraction data and further confirmed by ECD calculations. The isolated compound 1 has no cytotoxicity against HCT-116 and PC-3 cancer cell lines and a weak antimicrobial activity against Escherichia coil. In addition, compound 1 also exhibited a weak anti-inflammatory action in lipopolysacaride (LPS)-induced RAW 264.7 macrophages with an IC₅₀ value of 57.3?±?1.03?μM.     

Njaoamine I,a cytotoxic polycyclic alkaloid from the Haplosclerida sponge Haliclona (Reniera) sp.

A new cytotoxic polycyclic alkaloid containing a quinoline moiety, njaoamine I (1) has been isolated from the methanol extract of the sponge Haliclona (Reniera) sp. collected at Okuza Island, Tanzania. The structure of compound 1 was determined by 1D and 2D NMR and HRMS data analysis. Its relative configuration was elucidated by a NOESY experiment and confirmed by comparison of its NMR spectral data to those of njaoamines A–H. Moreover, njaoamine G (2) was also detected by LC/MS analysis of the methanol extract. Njaoamine I (1) displays cytotoxic activity against a panel of three human tumor cell lines in the micromolar range.     

A new eudesmane sesquiterpene glycoside from Parepigynum funingense

A new eudesmane sesquiterpene glycoside,1α,6β-dihydroxy-5,10-bis-epi-eudesm-4(15)-ene-6-O-β-D-glucopyranoside(2), together with a known analogue compound,1α,6β-dihydroxy-5,10-bis-epi-eudesm-3-ene-6-O-β-D-glucopyranoside(1),were isolated from the roots of Parepigynumfuningense.The structure of 2 was determined by 1D and 2D NMR spectroscopy.Compound 1 was isolated from this plant for the first time.     

Isatindigodiphindoside,an alkaloid glycoside with a new diphenylpropylindole skeleton from the root of Isatis indigotica

A novel indole alkaloid glycoside with an unprecedented 2-(diphenylpropyl)-indole skeleton, isatindigodiphindoside (1), was isolated from an aqueous extract of the roots of Isatis indigotica. The structure was determined by extensive spectroscopic studies, especially by 2D NMR data analysis combined with enzymatic hydrolysis and ECD calculations. Plausible biosynthetic pathways of compound 1 are also discussed.     

Ligand controlled structure of cadmium(II) metal-organic frameworks for fluorescence sensing of Fe3+ ion and nitroaromatic compounds

2-Fold interpenetrating 3D framework for selective adsorption of CO₂ over CH₄ and fluorescence detection of Fe³⁺ ions and nitroaromatic compounds through fluorescence quenching.     

Amarusine A,a new dioxaspiro[4.4]nonane derivative with a butyrolactone ring from Pleioblastus amarus

Amarusine A (1), a new polyketide derivative possessing an unusual dioxaspiro[4.4]nonane derivative with a butyrolactone ring, was isolated from the leaves of Pleioblastus amarus. The structure and absolute stereochemistry of compound 1 were rigorously determined using UV, IR, HRESIMS, and 1D and 2D NMR techniques and by comparing experimental and calculated electronic circular dichroism (ECD) spectra. Amarusine A (1) exhibits a good antioxidant activity for scavenging the DPPH radical. A possible biosynthetic pathway was postulated.     

Synthesis, crystal structure, and magnetic properties of two-dimensional divalent metal glutarate/dipyridylamine coordination polymers, with a single crystal-to-single crystal transformation in the copper derivative

Hydrothermal reaction of divalent metal chlorides with glutaric acid and 4,4′-dipyridylamine (dpa) has afforded an isostructural family of coordination polymers with formulation [M(glu)(dpa)]_n (M=Co (1), Ni (2), Cu (3); glu=glutarate). Square pyramidal coordination is seen in 1-3, with semi-ligation of a sixth donor to produce a “5+1” extended coordination sphere. Neighboring metal atoms are linked into 1D [M(glu)]_n neutral chains through chelating/monodentate bridging glutarate moieties with a syn-anti binding mode, and semi-chelation of the pendant carboxylate oxygen. These chains further connect into 2D layers through dipodal dpa ligands. Neighboring layers stack into the pseudo 3D crystal structure of 1-3 through supramolecular hydrogen bonding between dpa amine units and the semi-chelated glutarate oxygen atoms. The variable temperature magnetic behavior of 1-3 was explored and modeled as infinite 1D Heisenberg chains. Notably, complex 3 undergoes a thermally induced single crystal-to-single crystal transformation between centric and acentric space groups, with a conformationally disordered unilayer structure at 293 K and an ordered bilayer structure at 173 K. All materials were further characterized via infrared spectroscopy and elemental and thermogravimetric analyses.     

Synthesis, structures, luminescent and magnetic properties of four coordination polymers with the flexible 1,3-phenylenediacetate ligands

Four coordination polymers, [Zn(pda)(bpy)(H₂O)]_n·nH₂O (1), [Cd(pda)(prz)(H₂O)]_n (2), [Co₃(μ₃-OH)₂(pda)₂(pyz)]_n·2nH₂O (3) and [Pr₂(pda)₃(H₂O)₂]_n (4) (H₂pda=1,3-phenylendiacetic acid, bpy=4,4′-bipyridine, prz=piperazine and pyz=pyrazine) have been hydrothermally synthesized and characterized. Complex 1 is a 1D wheel-like chain structure, which is further extended into a 3D metal-organic supramolecular framework by H-bonds and π-π stacking interactions. Complex 2 is a 1D ladder-like chain structure, which is also further extended into a 3D metal-organic supramolecular framework by H-bonds. Complex 3 possess a 2D sheet structure with infrequent two pairs of double-helix chains. Complex 4 features a 3D structure. Both 1 and 2 display strong blue fluorescent emission at room temperature. Magnetic susceptibility measurements of complexes 3 and 4 exhibit antiferromagnetic interactions between the nearest metal ions, with C=9.99 and 3.43 cm³ mol⁻¹ K, and θ=−23.9 and −46.3 K, respectively.     

The diastereoisomeric forms of a mononuclear Ru(II) complex bearing a bis-phenanthroline Tröger’s base

The synthesis of a novel completely asymmetric mononuclear complex of ruthenium(II) bearing a chiral bis-phenanthroline Tröger’s base ligand 1 (TBphen₂) is reported. The diastereoisomeric forms of [Ru(phen)₂TBphen₂]²⁺ (ΔS/ΛR=rac-2a and ΛS/ΔR=rac-2b) were separated through crystallization. A complete structure elucidation of the diastereoisomers in solution, including chirality assignment, was achieved by 1D and 2D NMR techniques. Photophysical characterization revealed no significant differences in the emission properties of rac-2a and rac-2b that closely resemble those of [Ru(phen)₃]²⁺.     

The structure and luminescence properties of three complexes based on bifunctional imidazole-dicarboxylate connector

To study the diverse coordination modes of the H₂btib,three new coordination architectures,namely, [Ag（Hbtib）CH₃CN]_n（1）,)[Ag（Hbtib）]_n（2） and[Pb（btib）（CH₃OH）₂]_n（3）（where H₂btib=4-（（2-butyl-5-（2- carboxy-3-（thiophen-2-yl）prop-1-enyl）-1H-imidazol-1-yl）methyl）benzoic acid） have been synthesized and characterized by elemental analysis,IR spectrum and single-crystal X-ray diffraction.Complex 1 exhibits 1D single chain structure,while 2 shows 1D double metal chain motif,and 3 features a 2D layer topology.Also,1,2 and 3 display strong emission band in the solid state at room temperature.     

Sanctolide A, a 14-membered PK-NRP hybrid macrolide from the cultured cyanobacterium Oscillatoria sancta (SAG 74.79)

Sanctolide A (1), a 14-membered polyketide-nonribosomal peptide (PK-NRP) hybrid macrolide, was isolated from the cultured cyanobacterium Oscillatoria sancta (SAG 74.79). The planar structure was determined using various spectroscopic techniques including HRESIMS, and 1D and 2D NMR analyses. The relative configuration was assigned by J-based configurational analysis in combination with NOE correlations. The absolute configuration was determined by Mosher ester and enantioselective HPLC analyses. The structure of sanctolide A (1) features a rare N-methyl enamide and a 2-hydroxyisovaleric acid, which are incorporated to form a 14-membered macrolide ring structure, comprising a new type of cyanobacterial macrolides derived from a PKS-NRPS hybrid biosynthetic pathway.     

Synthesis and structures of two novel non-centrosymmetric metal-organic polymers containing 2-(pyridin-4-yl)-1H-imidazole-4,5-dicarboxylic acid ligands

Two novel non-centrosymmetric coordination polymer, [Zn₂(PIDC)(H₂O)Cl]_n (1) and {[Mn(HPIDC)H₂O]·2H₂O}_n (2) have been synthesized through hydrothermal method and characterized by IR, elemental analysis and single-crystal X-ray diffraction. Complex 1 crystallized in a chiral space group P2₁2₁2₁ has a 2D network structure. Complex 2 is a 3D open framework with 1D channel where 1D zigzag water chains are reside through hydrogen-bonding interactions and crystallized in a chiral space group C_c. Both 1 and 2 display a strong second harmonic generation (SHG) response.     

A novel heptacyclic diterpene from Alpinia pahangensis Ridley,a wild ginger endemic to Malaysia

Pahangensin D (1), a bis-labdanic diterpene featuring an unprecedented carbon skeleton, was isolated as a minor constituent from the rhizomes of Alpinia pahangensis Ridley. Its structure and relative stereochemistry were established on the basis of rigorous spectroscopic methods including 1D and 2D NMR techniques and LCMS-IT-TOF analysis.     

Polyketides and nitrogenous metabolites from the endophytic fungus Phomopsis sp. D15a2a

Three new polyketides, phomopones A−C (1–3), one new cyclic tetrapeptide, 18-hydroxydihydrotentoxin (4), and a new amide, 6-hydroxyenamidin (5) together with a known derivative, enamindin (6) were obtained from the endophytic fungus Phomopsis sp. D15a2a isolated from the plant Alternanthera bettzickiana. The structures of the new compounds were elucidated by 1D, 2D NMR and HRMS data. The absolute configurations of the isolated metabolites were determined either by X-ray crystallography, Marfey’s method or by converting the compounds to Mosher esters.     

Amphirionin-5, a novel linear polyketide from a cultured marine dinoflagellate Amphidinium species with a potent cell proliferation-promoting activity

A novel linear polyketide, amphirionin-5 (1), has been isolated from the cultivated algal cells of the benthic dinoflagellate Amphidinium sp. (strain KCA09053), and the structure was elucidated on the basis of detailed analyses of 1D and 2D NMR data. Amphirionin-5 (1) resulted in a 282% increase in the proliferation of murine bone-marrow derived stromal ST-2 cells and 320% increase in the proliferation of murine osteoblastic MC3T3-E1 cells.     

Syntheses, structures and photoluminescence of a series of coordination frameworks based on dicarboxylate anion and bis(imidazole) ligand

In this article, ten new coordination frameworks, namely, [Ni(H₂O)₆]·(L3) (1), [Zn(L3)(H₂O)₃] (2), [Cd(L3)(H₂O)₃]·5.25H₂O (3), [Ag(L1)(H₂O)]·0.5(L3) (4), [Ni(L3)(L1)] (5), [Zn(L3)(L1)_0.5]·H₂O (6), [Cd(L3)(L1)_0.5(H₂O)] (7), [CoCl(L3)_0.5(L1)_0.5] (8), [ZnCl(L3)_0.5(L2)_0.5] (9), and [CoCl(L3)_0.5(L2)_0.5] (10), where L1 = 1,1′-(1,4)-butanediyl)bis(imidazole), L2 = 1,1′-(1,4-butanediyl)bis(2-ethylbenzimidazole) and H₂L3 = 3,3′-(p-xylylenediamino)bis(benzoic acid), have been synthesized by varying the metal centers and nitrogen-containing secondary ligands. These structures have been determined by single-crystal X-ray diffraction analyses, elemental analyses and IR spectra. In 1, the L3 anion is not coordinated to the Ni(II) center as a free ligand. The Ni(II) ion is coordinated by water molecules to form the cationic [Ni(H₂O)₆]²⁺ complex. The hydrogen bonds between L3 anions and [Ni(H₂O)₆]²⁺ cations result in a three-dimensional (3D) supramolecular structure of 1. In compounds 2 and 3, the metal centers are linked by the organic L3 anions to generate 1D infinite chain structures, respectively. The hydrogen bonds between carboxylate oxygen atoms and water molecules lead the structures of 2 and 3 to form 3D supramolecular structures. In 4, the L3 anion is not coordinated to the Ag(I) center, while the L1 ligands bridge adjacent Ag(I) centers to give 1D Ag-L1 chains. The hydrogen bonds among neighboring L3 anions form infinite 2D honeycomb-like layers, in the middle of which there exist large windows. Then, 1D Ag-L1 chains thread in the large windows of the 2D layer network, giving a 3D polythreaded structure. Considering the hydrogen bonds between the water molecules and L3 anions, the structure is further linked into a 3D supramolecular structure. Compounds 5 and 7 were synthesized through their parent compounds 1 and 3, respectively, while 6 and 9 were obtained by their parent compound 2. In 5, the L3 anions and L1 ligands connect the Ni(II) atoms to give a 3D 3-fold interpenetrating dimondoid topology. Compound 6 exhibits a 3D three-fold interpenetrating α-Po network structure formed by L1 ligands connecting Zn-L3 sheets, while compound 7 shows a 2D (4,4) network topology with the L1 ligands connecting the Cd-L3 double chains. In compound 8, the L1 ligands linked Co-L3 chains into a 2D layer structure. Two mutual 2D layers interpenetrated in an inclined mode to generate a unique 3D architecture of 8. Compounds 9 and 10 display the same 2D layer structures with (4,4) network topologies. The effects of the N-containing ligands and the metal ions on the structures of the complexes 1-10 were discussed. In addition, the luminescent properties of compounds 2-4, 6, 7 and 9 were also investigated.     

Stereoselective enzymatic synthesis of monoglucosyl-myo-inositols with in vivo anti-inflammatory activity

The monoglucosyl-inositols α-d-glucopyranosyl-(1→4)-4d-myo-inositol 3 and α-d-glucopyranosyl-(1→1)-1d-myo-inositol 4 were synthesized by a combined enzymatic transglucosylation and hydrolysis strategy, using cyclodextrin glucosyl transferase (CGTase) from Thermoanaerobacter sp., followed by hydrolysis with Aspergillus niger glucoamylase. The glucosides were separated by preparative HPLC and fully characterized by extensive 1D and 2D NMR studies. The structure of the regioisomer 4 was confirmed by X-ray crystallography of its perbenzoylated derivative 4a. Both isomers demonstrated in vivo anti-inflammatory activity at comparative levels to corticosterone on mouse ear oedema induced by 12-O-tetradecanoylphorbol-13-acetate (TPA) and in rat hind paw oedema induced by carrageenan.     

(+)-7-Bromotrypargine: an antimalarial β-carboline from the Australian marine sponge Ancorina sp.

Mass-directed isolation of the CH₂Cl₂/MeOH extract from the Australian marine sponge Ancorina sp. resulted in the purification of a new antimalarial β-carboline, (+)-7-bromotrypargine 1, along with the previously isolated natural product, 6-bromotryptamine 2. The structure of 1 is determined by extensive 1D/2D NMR and MS data analyses. Comparison of the chiro-optical data for 1 with literature values of related natural products is used to determine the absolute stereochemistry of (+)-7-bromotrypargine as 1R. Antimalarial activity data for 1 and 2 against a chloroquine-resistant (Dd2) and chloroquine-sensitive (3D7) Plasmodium falciparum strain are also provided.