Synthesis and crystal structure of the complex [Nd(2-EOBA)<Subscript>3</Subscript>(phen)(H<Subscript>2</Subscript>O)]<Subscript>2</Subscript> · H<Subscript>2</Subscript>O

A novel lanthanide complex of [Nd(2-EOBA)₃(phen)(H₂O)]₂ · H₂O (2-EOBA = 2-ethoxylbenzoate, phen = 1,10-phenanthroline), has been synthesized and structurally characterized by single crystal X-ray diffraction. The complex crystallizes in monoclinic, space group P2(1)/n with a = 14.7453(18) Å, b = 12.3628(15) Å, c = 19.473(2) Å, α = 90°, β = 93.349(2)°, γ = 90°. Two Nd³⁺ ions are connected together by two bridging 2-EOBA ligands and each Nd³⁺ ion is further coordinated by two chelating 2-EOBA ligands, one chelating phen molecule and one water molecule. The coordination number of Nd³⁺ ion is nine. The coordination geometry of Nd³⁺ ion is a distorted monocapped square-antiprism.     

Synthesis and crystal structure of complex [Mn(Imdc)<Subscript>2</Subscript>(H<Subscript>2</Subscript>O)<Subscript>2</Subscript>] · 2H<Subscript>2</Subscript>O and its interaction with DNA

Under hydrothermal conditions, the complex [Mn(lmdc)₂(H₂O)₂] · 2H₂O (I) was synthesized and characterized by elemental analysis and IR spectrum (HImdc = 4,5-imidazofedicarboxylic acid). The crystal structure of I was determined by single-crystal X-ray diffraction (crystallizing in the monoclinic crystal system, P ₂/c space group, a = 11.000(2), b = 7.1281(14), c = 12.696(3) Å, β = 122.45(3), Z = 2. In I, the Mn²⁺ ion was chelated by two Imdc with one of their nitrogen atoms and a carboxylic oxygen atom, while two water molecules occupy the axial position of the Mn atom forming a distorted octahedral geometry. Three-dimensional structure of I was formed by intermolecular hydrogen bonds. UV-Vis and fluorescence spectra of I interacting with DNA show that insertion is the main binding mode between I and fish sperm DNA. Gel electrophoresis shows that I cleaves both supercoiled and circular pBR322 DNA to form a small molecular fragment.     

Synthesis of [MnCl<Subscript>3</Subscript>(H<Subscript>2</Subscript>O)<Subscript>2</Subscript>(Hatz)]·H<Subscript>2</Subscript>O and investigation of its structure via X-ray diffraction,spectroscopic measurements and DFT calculations

The 3-amino-1,2,4-triazole (atz)-based manganese complex was prepared and characterized through single-crystal X-ray diffraction, IR, EPR, and UV–visible spectroscopy. In the crystal structure, individual complex are interconnected through N(O)–H…Cl hydrogen bonds into 1D undulating chains running parallel to the [110] direction of the unit cell. Chains further grow into 2D supramolecular layers by way of the lattice water molecules of coordination and the chloride anions (O–H…Cl). Layers pack along the b-axis of the unit cell mediated by O–H…Cl(N) and N–H…O(Cl) hydrogen bonds forming a 3D supramolecular architecture. The theoretical calculations were also performed to optimize the structure of the complexes in the gas phase to confirm the structures proposed by X-ray crystallography. In addition, IR and UV–visible spectra of complex were calculated and compared with the corresponding experimental spectra to complete the experimental structural identification. The three-dimensional Hirshfeld surface (3D-HS) and their relative two-dimensional fingerprint plots (2D-FP) reveal that the structure is dominated by H…Cl/Cl…H (50.5%), H…O/O…H (11.3%) and N…O/O…N (10.2%) contacts.     

Crystal structure of Mg pivalate hydrate Mg(H<Subscript>2</Subscript>O)<Subscript>6</Subscript>(Piv)<Subscript>2</Subscript> · 3H<Subscript>2</Subscript>O

Single crystals of Mg pivalate hydrate, Mg(H₂O)₆(Piv)₂ · 3H₂O (HPiv = (CH₃)₃CCOOH) are synthesized and their structure is determined by X-ray diffraction method. The crystals are rhombic: a = 10.917(2) Å, b = 12.625(2) Å, c = 31.394(8) Å, Z = 8, space group Pbca, R ₁ = 0.0525. The Mg atom has octahedral surrounding of the O atoms of water molecules (Mg-O 2.044–2.137 Å). The cationic chains of [Mg(H₂O)₆] _∞ ²⁺ lie in the voids of doubled network anionic layers of [(H₂O)₃(Piv)₂] _∞∞ ^2? . Inside the layer, the pivalate anions alternate with water molecules in the xy plane, being bonded to them by hydrogen bonds. The cationic chains and the anionic layers are united into layered packs by hydrogen bonds between coordinated water molecules and pivalate anions and between coordinated and crystal hydrate water molecules.     

Synthesis and X-ray diffraction study of Li(H<Subscript>3</Subscript>O)[UO<Subscript>2</Subscript>(C<Subscript>2</Subscript>O<Subscript>4</Subscript>)<Subscript>2</Subscript>(H<Subscript>2</Subscript>O)] · H<Subscript>2</Subscript>O

Single crystals of Li(H₃O)[UO₂(C₂O₄)₂(H₂O)] · H₂O (I) have been synthesized and studied by X-ray diffraction. Compound I crystallizes in the monoclinic crystal system with the unit cell parameters: a = 7.1682(10) Å, b = 29.639(6) Å, c = 6.6770(12) Å, β= 112.3(7)°, space group P 2₁/c, Z = 4, R = 4.36%. Structure I contains discrete mononuclear groups [UO₂(C₂O₄)₂(H₂O)]^2? ascribed to the crystal-chemical group AB ₂ ⁰¹ M¹ (A = UO₂ ²⁺, B⁰¹ =C₂O ₄ ^2? , M¹ = H₂O), which are “cross-linked” by the lithium ions into infinite layers {Li(UO₂)(C₂O₄)₂(H₂O)₂}^? perpendicular to [010]. The hydroxonium ions are located between adjacent uranium-containing layers. A hydrogen bond system involving water molecules, oxalate ions, and hydroxonium combines the anionic layers into a three-dimensional framework.     

Synthesis and structure of a three-dimensional coordination polymer [Ag<Subscript>3</Subscript>hmt<Subscript>3</Subscript>(μ<Subscript>3</Subscript>-btc)]·5H<Subscript>2</Subscript>O

A new coordination polymer [Ag₃hmt₃(₃-btc)]·5H₂O (1 )(hmt = hexamethylenetetramine, btc = 1,3,5-benzenetricarboxyl)has been successfully synthesized. Crystal data: P2₁/a , a = 11.9906(2) Å, b = 17.3689(2) Å, c = 16.96100(10) Å, = 101.9820(14)°, V = 3455.40(7) ų, Z = 4, Dc = 2.002 mg/m³. In the hexagonal structure of the Ag-hmt unit, each Ag-hmt unit comprises three Ag atoms and three hmt ligands. The ₃-btc ligands bridge the adjacent two-dimensional honeycomb-like Ag-hmt layers to form three-dimensional networks. Structural analysis shows that hydrogen bonds play a key role for the structural stability of the compounds.Original Russian Text Copyright © 2004 by Shoubo Qin, Sheming Lu, Yanxiong Ke, Jianmin Li, Shuxi Zhou, Xintao Wu, and Wenxin DuTranslated from Zhurnal Strukturnoi Khimii, Vol. 45, No. 3, pp. 566–571, May–June 2004.     

Synthesis and structure of antimony compounds (Ph<Subscript>3</Subscript>SbBr)<Subscript>2</Subscript>O · 2PhH and [(2-MeC<Subscript>6</Subscript>H<Subscript>4</Subscript>)<Subscript>3</Subscript>SbBr]<Subscript>2</Subscript>O · 0.5PhH

Hydrolysis of triphenylantimony dibromide or tri(o-tolyl)antimony dibromide in benzene yields the solvates (Ph₃SbBr)₂O · 2PhH (triclinic modification) (I) and [(2-MeC₆H₄)₃SbBr]₂O · 0.5PhH (II), in which the Sb atoms have a distorted trigonal-bipyramidal coordination. The aryl ligands are in the equatorial positions; the bridging oxygen atom and the terminal Br ligands occupy the axial positions. The bond lengths in I: Sb-C, 2.103(2)–2.125(2) Å, Sb-O, 1.976(1) and 1.979(1); and Sb-Br, 2.7128(2) and 2.7592(2) Å. The bond lengths in II (Å): Sb-C, 2.109(6)–2.145(3) Å; Sb-O, 1.954(4)–1.958(4) Å; and Sb-Br, 2.7355(8)–2.7624(7) Å. The angles SbOSb are equal to 138.83(6)° in I and 170.8(3)° and 161.6° in II.     

Clathrate [Zn(C<Subscript>6</Subscript>H<Subscript>5</Subscript>COO)<Subscript>2</Subscript>(H<Subscript>2</Subscript>O)<Subscript>2</Subscript>] · 2CH<Subscript>3</Subscript>COOH: Synthesis and crystal structure

The clathrate [Zn(C₆H₅COO)₂(H₂O)₂] · 2CH₃COOH (I) was obtained for the first time from zinc(II) benzoate. The individuality, the unit cell parameters, and the number of “guest” molecules in complex I were determined from X-ray diffraction and derivatographic data. Its crystal structure was solved.     

Synthesis and structure of the [Co(NioxH)<Subscript>2</Subscript>(Thio)<Subscript>2</Subscript>]<Subscript>2</Subscript>SO<Subscript>4</Subscript>·2H<Subscript>2</Subscript>O complex compound

A new Co(III) complex of 1,2-cyclohexanedionedioxime and thiocarbamide with an SO ₄ ^2? anion and solvation water molecules in the outer sphere has been synthesized and its structure has been defined. Orthorhombic crystals, a = 11.659(2) Å, b = 26.448(5) Å, c = 30.142(6) Å, V = 9295(3) Å ³, Z = 8, d_calc = 1.599 g/cm³, space group Pbca; final R index is 0.0578 for 8221 reflections with I > 2σ(I). In the octahedral Co(III) complex, two 1,2-cyclohexanedionedioxime residues lie in the equatorial plane, while two thiocarbamide molecules are in the axial plane. Intramolecular bonds: N-H…O and O-H…O type hydrogen bonds and π-π interactions that stabilize the complex cations. In crystal, the components are linked by N-H…O and O-H…O hydrogen bonds into a 3D framework.     

Crystal structure of the ruthenium(II) nitrosotrichloro complex Na[RuNOCl<Subscript>3</Subscript>(H<Subscript>2</Subscript>O)OH]·2H<Subscript>2</Subscript>O

The crystal structure of the coordination compound Na[RuNOCl₃(H₂O)OH]·2H₂O is reported. The complex is studied by IR and NMR spectroscopy, powder and single crystal X-ray diffraction. Crystallographic data determined for H₇Cl₃NNaO₅Ru is: a = 6.648(2) ?, b = 8.216(7) ?, c = 10.063(3)?, α= 89.75(6)°, β = 70.96(2)°, γ = 78.76(5)°, V = 967.9(2) ?³, P1 space group, Z = 4, d _x = 2.165 g/cm³.     

Synthesis and structural characterization of a novel tetranuclear Cu(II) complex: [Cu<Subscript>4</Subscript>L<Subscript>2</Subscript>(pic)<Subscript>4</Subscript>(H<Subscript>2</Subscript>O)<Subscript>2</Subscript>]·2H<Subscript>2</Subscript>O

A novel Salen-type bisoxime ligand, 6,6′-dimethoxy-2,2′-[(1,4-butylene)dioxybis(nitrilomethylidyne)]diphenol (H₂L) and its tetranuclear Cu(II) complex, [Cu₄L₂(pic)₄(H₂O)₂]·2H₂O, have been synthesized and characterized by elemental analyses, IR, TG-DTA and ¹H-NMR etc. The X-ray crystal structure of the complex reveals that formation of a tetranuclear structure, which consists of four copper(II) atoms, two pentadentate L²⁻units, four picratols, two coordinated water molecules and two crystallizing water molecules. Around four copper ions are all octahedral geometries. It was demonstrated that the picratols in the tetranuclear copper(II) complex show a novel tridentate coordination mode.     

Synthesis and structure of the complex [Mo<Subscript>3</Subscript>(μ<Subscript>3</Subscript>-S)(μ<Subscript>2</Subscript>-S<Subscript>2</Subscript>)<Subscript>3</Subscript>(Et<Subscript>2</Subscript>NCS<Subscript>2</Subscript>)<Subscript>3</Subscript>]I

The structure of tri-μ₂-disulfido-μ₃-thiotris(diethyldithiocarbamato)-S,S′-triangle-trimolybdenum iodide [Mo₃(μ₃-S)(μ₂-S₂)₃(Et₂NCS₂)₃]I was determined. The compound was characterized by differential thermal analysis and IR, Raman, and X-ray electronic spectroscopy.     

Lithium pertechnetate trihydrate LiTcO<Subscript>4</Subscript> · 3H<Subscript>2</Subscript>O: Synthesis and crystal structure

Lithium pertechnetate trihydrate was obtained and its crystal structure was examined; LiTcO₄ · 3H₂O crystallizes in hexagonal crystal system as colorless elongated prismatic crystals (space group P6₃/mc, Z = 2; at 100 K: a = 7.8604(1) Å, c = 5.4164(1) Å). This compound is isostructural with LiClO₄ · 3H₂O, LiBrO₄ · 3H₂O, and LiMnO₄ · 3H₂O.     

Synthesis and isoconversional kinetic study of the formation of LiNiPO<Subscript>4</Subscript> from Ni<Subscript>3</Subscript>(PO<Subscript>4</Subscript>)<Subscript>2</Subscript>·8H<Subscript>2</Subscript>O as a new precursor

The nanosized LiNiPO₄ was successfully synthesized by a solid-state reaction between the new Ni₃(PO₄)₂·8H₂O precursor and Li₃PO₄ at 700 °C in air atmosphere. The formation of LiNiPO₄ was generated via three thermal decomposition steps. The samples were characterized by Fourier transform infrared, X-ray diffraction, scanning electron microscopy, atomic absorption/atomic emission spectrophotometers, and thermogravimetric/differential thermal gravimetric/differential thermal analysis techniques. The activation energy (E_α) values of the three steps were calculated by Vyazovkin method and determined to be 90.39?±?5.79, 197.81?±?7.46, and 308.66?±?12.03 kJ mol^?1, respectively. The average E_α values from this method are very close to E_α from KAS method. The most probable mechanism functions g(α) of three steps were evaluated by using the masterplots method and found to be the F_1/3 (first step), F_3/2 (second step), and D₄ (final step), respectively. The pre-exponential factors (A) values of three steps were obtained based on the E_α and g(α). The kinetic triplet parameters of the formation of LiNiPO₄ from the new precursor are reported in the first time.     

[Ca(OPPh<Subscript>3</Subscript>)<Subscript>5</Subscript>][Mo<Subscript>6</Subscript>(μ<Subscript>3</Subscript>-Cl)<Subscript>8</Subscript>Cl<Subscript>6</Subscript>] · OPPh<Subscript>3</Subscript>: Synthesis and crystal structure

A solvatothermal reaction of the octahedral cluster molybdenum complex (H₃O)₂[Mo₆(μ₃-Cl)₈Cl₆] · 6H₂O with CaCl₂ · 6H₂O and OPPh₃ in acetonitrile gave the known polymeric complex trans-[{Ca(OPPh₃)₄}{Mo₆(μ₃-Cl)₈Cl₆}]_∞. However, a closer examination revealed that this system also produces a novel cluster complex, [Ca(OPPh₃)₅][Mo₆(μ₃-Cl)₈Cl₆] · OPPh₃, which was isolated and characterized by X-ray diffraction.     

Synthesis,structure and magnetic properties of the pentanuclear complex [Fe<Subscript>2</Subscript>(CN)<Subscript>12</Subscript>Ni<Subscript>3</Subscript>(L)<Subscript>6</Subscript>]·27H<Subscript>2</Subscript>O,where L is nitronyl nitroxide

We succeeded in synthesizing a new high-spin complex [Fe₂(CN)₁₂Ni₃(L)₆]·27H₂O, where L is stable nitroxide 2-(imidazol-4-yl)-4,4,5,5-tetramethyl-2-imidazoline-3-oxide-1-oxyl. According to X-ray diffraction data, the metal core of the pentanuclear [Fe₂(CN)₁₂Ni₃(L)₆] molecule is a trigonal bipyramid with Fe atoms occupying the axial positions and linked via CN bridges to {NiL₂} fragments laying in the equatorial plane. A peculiarity of this coordination compound is a large number of water molecules per the [Fe₂(CN)₁₂Ni₃(L)₆] pentanuclear molecule in the structure. The complex character of the μ_eff(T) dependence points to many competing channels of exchange interactions between the three types of paramagnetic centers.     

Crystal structure of Cs[Gd(H<Subscript>2</Subscript>O)<Subscript>4</Subscript>Re<Subscript>6</Subscript>Te<Subscript>8</Subscript>(CN)<Subscript>6</Subscript>]·4H<Subscript>2</Subscript>O

The structure of the salt Cs[Gd(H₂O)₄Re₆Te₈(CN)₆]·4H₂O (space group P-1, a = 9.436(5) Å, b = 12.365(7) Å, c = 15.187(8)Å, α = 89.104(10)°, β = 86.996(10)°, γ = 82.304(9)°) has been established by single crystal XRD. The structure of the compound features layers involving Gd³⁺ cations bound to cluster anions [Re₆Te₈(CN)₆]^4? through cyanide groups. The interlayer space contains cesium cations and crystallization water molecules.     

Synthesis and Structure of [Co(NH<Subscript>3</Subscript>)<Subscript>6</Subscript>]<Subscript>2</Subscript>[W<Subscript>4</Subscript>Se<Subscript>4</Subscript>(CN)<Subscript>12</Subscript>]·8.5H<Subscript>2</Subscript>O

The compound [Co(NH₃)₆]₂[W₄Se₄(CN)₁₂]·8.5H₂O was obtained by evaporating an aqueous ammonia solution of K₆[W₄Se₄(CN)₁₂]·6H₂O and CoCl₂·6H₂O complexes. The starting Co(II) of CoCl₂·6H₂O transforms into [Co(NH₃)₆]³⁺ when exposed to air in a water-ammonia medium. Crystal data: triclinic crystal system, a = 10.7750(8) Å, b = 12.2843(9) Å, c = 19.6539(14) Å; α = 90.213(2)°, β = 99.910(2)°, γ = 114.737(1)°, V = 2319.1(3) ų, space group , Z = 2, D _x = 2.633 g/cm³.Original Russian Text Copyright © 2004 by I. V. Kalinina, Z. A. Starikova, F. M. Dolgushin, D. G. Samsonenko, and V. P. Fedin__________Translated from Zhurnal Strukturnoi Khimii, Vol. 45, No. 5, pp. 905–908, September–October, 2004.     

Magnetic properties of a linear trinuclear manganese compound [Mn<Subscript>3</Subscript>(PhCO<Subscript>2</Subscript>)<Subscript>6</Subscript>(Bipy)<Subscript>2</Subscript>] · H<Subscript>2</Subscript>O

The reaction of the trinuclear oxo-centered mixed-valence complex [Mn₃O(O₂CPh)₆(Py)₂(H₂O)] with 2,2′-bipyridyl (Bipy) and another potential tripodal ligand affords the title compound [Mn₃(PhCO₂)₆(Bipy)₂] · H₂O in good yield. The X-ray crystallographic diffraction study reveals that three mangenese ions are arranged in a linear mode with Mn_center-Mn_terminal and Mn_terminal-Mn_terminal diatances of 3.588 and 7.176 Å, respectively. Molar magnetic susceptibility of the compound gradually decreases from 12.23 (300 K) to 4.45 cm³ K mol^?1 (2 K). Taking into account the structure of this compound, the data in the 2.0–300 K range were fit to the appropriate theoretical expression to give J = ?2.73 cm^?1, ρ = 2.07%, N _a = ?0.0004 cm³ mol^?1, g = 1.992, and R ² = 0.99996. The magnetization versus external magnetic field measurements at 2 K shows that the ground state is S _T = 5/2.     

Synthesis,crystal structure and DNA-binding studies of the complex [Co(C<Subscript>10</Subscript>H<Subscript>9</Subscript>N<Subscript>2</Subscript>O<Subscript>4</Subscript>)<Subscript>2</Subscript>] · 3H<Subscript>2</Subscript>O

A novel binuclear Cobalt(II) complex with N-(2-propionic acid)-salicyloyl hydrazone (C₁₀H₁₀N₂O₄, H₃L) was prepared and characterized. The crystal structure of [Co(C₁₀H₉N₂O₄)₂] · 3H₂O was determined by X-ray single-crystal diffractometry. The Co²⁺ ion is six-coordinated by the carboxyl and acyl O atoms and azomethine N atoms of two tridentate N-(2-propionicacid)-salicyloyl hydrazone ligands, which form two stable five-numbered rings sharing one side in the keto form. The coordination environment around the Co²⁺ ion might be described as a distorted octahedron. Abundant hydrogen bonds of the types O-H…N and O-H…O between the water molecules and ligands not only form the three-dimensional network, but also provide an extrastability for the crystal. The complex was studied for the interaction with calf thymus DNA by electronic absorption titration and emission titration. The results show that the complex is bound to calf thymus DNA mainly by intercalation. The article is published in the original.