Multiscale dynamics of the cell envelope of Shewanella putrefaciens as a response to pH change

The bacterial surface properties of gram-negative Shewanella putrefaciens were characterized by microbial adhesion to hydrocarbons (MATH), adhesion to polystyrene dishes, and electrophoresis at different values of pH and ionic strength. The bacterial adhesion to these two apolar substrates shows significant variations according to pH and ionic strength. Such behavior could be partly explained by electrostatic repulsions between bacteria and the solid or liquid interface. However, a similar trend was also observed at rather high ionic strength where electrostatic interactions are supposed to be screened. The nanomechanical properties at pH 4 and 10 and at high ionic strength were investigated by using atomic force microscopy (AFM). The indentation curves revealed the presence of a polymeric external layer that swells and softens up with increasing pH. This suggests a concomitant increase of the water permeability and so did of the hydrophilicity of the bacterial surface. Such evolution of the bacterial envelope in response to changes in pH brings new insight to the pH dependence in the bacterial adhesion tests. It especially demonstrates the necessity to consider the hydrophobic/hydrophilic surface properties of bacteria as not univocal for the various experimental conditions investigated.     

A correlation between the virulence and the adhesion of Listeria monocytogenes to silicon nitride: An atomic force microscopy study

Listeria monocytogenes is a facultative intracellular Gram-positive bacterium that is widely distributed in the environment. Despite being pathogenic at the species level, L. monocytogenes in fact comprises a diversity of strains from pathogenic ones that can result in disease and/or mortality to others that are relatively avirulent. The main goal of the current study was to answer the question on whether enhanced binding or attachment of L. monocytogenes to inert surfaces bears any relationship to pathogenicity in food-borne isolates. To answer this question, the nanoscale adhesion forces of eight L. monocytogenes strains that vary in their pathogenicity levels to a model surface of silicon nitride were quantified using atomic force microscopy. The strains used were the highly pathogenic (EGDe, 874, 1002, ATCC 19115), the intermediate pathogenic (ATCC 19112, ATCC 19118), and the non pathogenic (ATCC 15313 and HCC25). Our results indicate that the average nanoscale adhesion (in nN) and the 50% lethal dose (LD50) of strain virulence quantified in mice are logarithmically correlated according to: (nN) = −0.032 ln (LD50) + 1.040, r² = 0.96. Such correlation indicates that nanoscale adhesion could potentially be used as a design criterion to distinguish between virulent and avirulent L. monocytogenes strains. Finally, stronger adhesion of virulent strains to inert surfaces modeled by silicon nitride might be a way for pathogenic strains to survive better in the environment and thus increase their likelihood of infecting animals or humans.     

Ab initio direct dynamics studies on the hydrogen abstraction reactions of CF2H2 and CF3H with F atom

The dynamic properties of the hydrogen abstraction reactions of CF₂H₂ and CF₃H with F atom are investigated in the temperature range of 182–2000 K. The minimum-energy path (MEP) is optimized at MP2/6-311 G(d, p) level, then the energy profiles are refined at the CCSD(T)/6-311++G(3df, 2pd) level (single-point). The theoretical rate constants, which are calculated by the variational transition state theory (VTST) including the small curvature tunneling (SCT) correction, are in good agreement with the experimental ones. It is found that the rate constant of the CF₂H₂ + F reaction are larger than that of the CF₃H + F reaction and the activation energies exhibit in the just opposite order. This phenomenon can be rationalized by the hardness η of the halomethane molecules. The comparison of the two reactions with the CFH₃ + F reaction is made. It is found that the rate constants decrease in the order of CFH₃ + F > CF₂H₂ + F > CF₃H + F. The effect of fluorine substitution leads to a dramatic increase in the activation energy and a decrease in the preexponential factor. We hope that present theoretical studies for these compounds can give further information concerning how fluorine substitution affects the rate constants of hydrogen abstraction reactions.     

Adsorption on stainless steel surfaces of biosurfactants produced by gram-negative and gram-positive bacteria: Consequence on the bioadhesive behavior of Listeria monocytogenes

The ability of adsorbed biosurfactants (Pf and Lb) obtained from gram-negative bacterium (Pseudomonas fluorescens) or gram-positive bacterium (Lactobacillus helveticus) to inhibit adhesion of four listerial strains to stainless steel was investigated. These metallic surfaces were characterized using the following complementary analytical techniques: contact-angle measurements (CAM), atomic force microscopy (AFM), polarization modulation-infrared reflection-adsorption spectroscopy (PM-IRRAS) and X-ray photoelectron spectroscopy (XPS). Contact-angles with polar liquids (water and formamide) indicated that the stainless steel surface covered with adsorbed biosurfactant was more hydrophilic and electron-donating than bare stainless steel. The surface characterization by XPS and PM-IRRAS revealed that conditioning the stainless steel changes the substrate in two ways, by modifying the surface alloy composition and by leaving an thin adsorbed organic layer. AFM observations enabled to say that the layer covered entirely the surface and was probably thicker (with patches) in the case of Pf-conditioned surfaces compared to the Lb-conditioned ones, which seemed to be less homogeneous. Though the added layer was thin, significant chemical changes were observed that can account for drastic modifications in the surface adhesive properties. As a matter of fact, adhesion tests showed that both used biosurfactants were effective by decreasing strongly the level of contamination of stainless steel surfaces by the four strains of Listeria monocytogenes. The more important decrease concerned the CIP104794 and CIP103573 strains (>99.7%) on surface conditioned by L. helveticus biosurfactant. A less reduced phenomenon (75.2%) for the CIP103574 strain on stainless steel with absorbed biosurfactant from P. fluorescens was observed. Whatever the strain of L. monocytogenes and the biosurfactant used, this antiadhesive biologic coating reduced both total adhering flora and viable and cultivable adherent bacteria on stainless steel surfaces. This study confirms that biosurfactants constitute an effective strategy to prevent microbial colonization of metallic surfaces by pathogenic bacteria like the food-borne pathogen L. monocytogenes.     

A study of early colour change due to simulated accelerated sunlight exposure in Scots pine (Pinus sylvestris)

A detailed study of early colour change in Scots pine (Pinus sylvestris) due to accelerated simulated sunlight exposure was undertaken focusing on the first 24 h of change. Colour changes were monitored with a Datacolor check spectrophotometer and compared with a set of controls. Measurements on both samples and controls were performed hourly for the first 24 h and there after daily until 168 h’ exposure with extra measurements at 200, 350 and 500 h. A subset of samples was extracted prior to exposure to check the effects of any colour change due to the presence of extractives. Data was analysed using the reflectance spectra (400–700 nm) as well as the CIE-L^*a^*b^* system and ΔE. The majority of colour changes were found to occur within the first 24 h. This was unaffected by the removal of extractives from the wood and was independent of temperature. Mechanical properties and weight changes were also monitored to allow a comparison of sensitivity between the differing methods.     

五味子中木脂素类成分的高效液相色谱-电喷雾质谱研究

采用液相色谱-电喷雾质谱联用(HPLC-ESI-MSⁿ)技术, 对北五味子与南五味子中木脂素类成分进行了系统研究. 通过HPLC-ESI-MS技术, 获得了相应化合物的保留时间、紫外光谱和分子量等信息, 利用电喷雾多级串联质谱技术(ESI-MSⁿ), 获得了相应化合物的结构信息. 研究结果表明, 北五味子与南五味子的主要木脂素成分除5个共有成分外其它成分差异较大, 并且其共有成分含量差别较大. 在此基础上, 建立了简便、快速的北五味子与南五味子药材分析鉴定的新方法.     

A new approach to the preparation of microcrystalline ZnNb2O6 photocatalysts via a water-soluble niobium-citrate-peroxo compound

A water-soluble niobium-citrate-peroxo compound was synthesized by using Nb₂O₅ as a precursor. This niobium compound solution was successfully applied to the preparation of microcrystalline ZnNb₂O₆ photocatalysts via a water-based sol-gel method. The results indicated that pure ZnNb₂O₆ could be obtained in a temperature range from 750 to 950 °C. The absorption edge of ZnNb₂O₆ located at about 305 nm, corresponding to a band gap of ca. 4.06 eV. The photocatalytic activities of the as-prepared samples for the methyl orange degradation were evaluated under UV light (λ = 254 nm). It was found that the sample obtained at 850 °C showed the highest photocatalytic activity due to its suitable surface area and crystallinity.     

Atomic force microscope studies on the interactions of Candida rugosa lipase and supported lipidic bilayers

Using the Langmuir–Blodgett technique we prepared substrate supported well-defined lipid/phospholipid (1-mono-palmitoyl-rac-glycerol (MPG)/l,2-dipalmitoyl-sn-glycerol-3-phosphocholine (DPPC)) bilayers in which the MPG lipid leaflet was exposed to the aqueous phase. Hydrolysis of MPG performed by Candida rugosa lipase (CRL) on the upper MPG layer of these supported bilayers on mica was imaged by real time atomic force microscope (AFM) using a liquid cell, so that the area increase of the initial structural defects could be followed over time. Our data strongly suggest that the edges of the initial structural defects are the preferred activation sites for CRL once the enzyme is adsorbed onto these interfaces. When a 2.5 nM bulk concentration of CRL was assayed on this planar lipid substrate, we found a long lag phase before a sharp increase of catalytic activity. The lag–burst kinetic behaviour was related to the interfacial activation phenomenon although we propose that it is also dependent on the gel-phase state of this interface.     

Comparing the stability of tribenzo[ b , n , pqr ]perylene and tribenzo[ b , k , pqr ]perylene

Two isomeric benzenoid hydrocarbons – tribenzo[b,n,pqr]perylene and tribenzo[b,k,pqr]perylene played a crucial role in the formulation of the Clar aromatic sextet theory. The basic assumption of this theory is that tribenzo[b,n,pqr]perylene is more stable than tribenzo[b,k,pqr]perylene because the former has five, whereas the latter only four aromatic sextets. We now approach this stability problem from a different direction. By means of a recently developed molecular-orbital-based method it is possible to estimate the energy effects of individual cycles, as well as pairs, triplets, etc. of cycles in polycyclic conjugated molecules. From these energy-effects one can better understand which structural details are responsible for the thermodynamic stability of the underlying molecule. In particular, it is possible to rationalize (in a quantitative manner) the causes of differences in the thermodynamic stability of isomers. Our analysis corroborates the conclusion of Clar theory, but points out a number of hitherto overlooked structure-stability connections. Correspondence: Ivan Gutman, Faculty of Science, University of Kragujevac, P.O. Box 60, 34000 Kragujevac, Serbia.     

Calorimetric study of the effect of protoberberine alkaloids in Coptis chinensis Franch on Staphylococcus aureus growth

The effects of five protoberberine alkaloids (PBAs) from rhizoma of Coptis chinensis Franch on Staphylococcus aureus growth were investigated by calorimetry. The power-time curves of S. aureus with and without PBA were measured in closed glass ampoules in a TAM Air isothermal calorimeter. And, the extent and duration of inhibitory effects on the metabolism were evaluated by growth rate constant (k), half inhibitory ratio (IC₅₀), maximum heat-output (P_max) and peak time (t_p). The obtained calorimetric data showed that the inhibitory action varied for different protoberberine alkaloid. The results also revealed that the sequence of antimicrobial activity of five PBAs was: berberine>coptisine>palmatine>epiberberine>jatrorrhizine. One explanation could be substitutions at several positions in the core structure of berberine possess different antimicrobial activity. In conclusion, it can be proposed that this technique should be as a useful analytical method for determining the bioactivity of PBAs.     

Phenolic compounds from the aqueous extract of Acacia catechu

From the aqueous extract of Acacia catechu,two new phenolic compounds(3R,4R)-3-(3,4-dihydroxyphenyl)-4-hydroxycy-clohexanone (1) and(4R)-5-(1-(3,4-dihydrophenyl)-3-oxobutyl)-dihydrofuran-2(3H)-one(2) were obtained.Their structures were determined on the basis of spectroscopic analysis.Free-radical scavenging activities of them were evaluated.     

Reduction of the IgE-binding ability and maintenance of immunogenicity of gamma-irradiated Dermatophagoides farinae

House dust mites, Dermatophagoides farinae (DF) and Dermatophagoides pteronyssinus, are major allergens in the most common indoor allergen and are important risk factor for asthma. The modified antigen has been studied to treat allergic disorder. This study was carried out to measure possibility of modified allergen using gamma irradiation to treat allergy such as asthma. DF solutions (2 mg/ml) as target allergen were irradiated with Co-60 at 50 and 100 kGy. Conformational alternation of irradiated DF was observed by sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE). Levels of anti-irradiated DF mouse IgGs (sub-isotypes) against intact DF were measured similar to that of anti-intact DF IgGs. The binding abilities of house dust mite-allergic patients’ IgE were reduced depending on radiation dose, and irradiation could inhibit the binding ability of patients’ IgE more than 40%. This study has shown that the binding ability of IgE was reduced by conformational alteration by irradiation and the irradiated DF had epitopes capable to induce immunogeniciy.     

Characterization of heat-induced interaction of neutral liposome with lipid membrane of Streptomyces griseus cell

The interaction between the neutral 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphatidylcholine (POPC) liposomes and cell membrane of Streptomyces griseus induced by the heat treatment at specific temperature was investigated, focusing on the internalization of the neutral POPC liposomes with S. griseus cells. In an attempt to clarify the modes of liposome internalization, various kinds of inhibitors of endocytotic pathways were used to treat S. griseus cells. The efficiency of the heat treatment on liposome–cell membrane interactions was finally characterized based on the hydrophobic, electrostatic interactions and hydration effect. In fact, the internalization of the neutral liposomes into these cells was found to show higher rate and greater amount at higher temperatures. The kinetic study showed that the maximum amount of the internalized liposomes was, respectively, 469 × 10⁵ and 643 × 10⁵ liposomes/cell at 37 and 41 °C. The internalization of the neutral liposomes induced by the heat treatment was characterized, implying that the endocytosis occurred. The interactions involving the internalization, adsorption, and fusion of these liposomes with S. griseus cells were mainly contributed by the hydrophobic interaction and the unstable hydrogen bonds caused by the loss of water of surface hydration of cell membrane rather than the electrostatic interaction under the specific heat condition.     

Bisabocurcumin, a new skeleton curcuminoid from the rhizomes of Curcuma longa L.

A new skeleton bisabolane-type sesquiterpene curcuminoid,bisabocurcumin(1),along with 5 known compounds,curcumin(2), demethoxycurcumin(3),bidemethoxycurcumin(4),(1E,4E)-1,5-bis(4-hydroxy-3-methoxyphenyl)-penta-1,4-dien-3-one(5),and (1E,4E)-1-(4-hydroxy-3-methoxyphenyl)-5-(4-hydroxy phenyl-)-penta-1,4-dien-3-one(6)were isolated from the rhizomes of Curcuma longa L.Their structures were determined on the basis of spectroscopic analysis.Bisabocurcumin(1) is firstly obtained from nature with a new skeleton combined by a bisabolane-type sesquiterpene and a 1,7-diphenylheptanoid through a C-C bond.     

The role of physicochemical interactions and FLO genes expression in the immobilization of industrially important yeasts by adhesion

One of the industrially important qualities of yeast is their ability to provide the cell-cell and cell-support interactions. This feature of yeast is responsible for technologically significant phenomena such as flocculation (brewing) and yeast biofilm formation (immobilization to supports), whereas these phenomena are time, environment, and strain dependent. Therefore, the goal of this work was to verify the possibility to predict and subsequently select yeast strains capable to colonize solid supports by using physicochemical adhesion models. Three different industrial yeast strains (Saccharomyces cerevisiae) were tested for their adhesion onto spent grain particles in the continuous gas-lift reactor. The cell adhesion energies were calculated, based on physicochemical characteristics of surfaces involved, according to three adhesion models (DLVO theory, thermodynamic approach, and extended DLVO theory). The role of physicochemical surface properties in the cell-cell and cell-support interactions was evaluated by comparing the computed predictions with experimental results. The best agreement between forecast and observation of the yeast adhesion to spent grains was achieved with the extended DLVO (XDLVO) theory, the most complex adhesion model applied in this study. Despite its relative comprehensiveness, the XDLVO theory does not take into account specific biochemical interactions. Consequently, additional understanding of the yeast adhesion mechanism was obtained by means of quantifying the expression of selected FLO genes. The presented approach provides tools to select the appropriately adhesive yeast strains and match them with solid supports of convenient surface properties in order to design immobilized biocatalysts exploitable in biotechnological processes.     

Colensolide A: a new nitrogenous bromophenol from the New Zealand marine red alga Osmundaria colensoi

A new nitrogenous bromophenol, colensolide A, is isolated from the New Zealand red alga Osmundaria colensoi together with the known bromophenol lanosol and four of its derivatives. In this study, a novel technique is employed to identify potentially new compounds in semi-purified mixtures containing a plethora of structurally similar, known metabolites, using NMR spectroscopy. The structure and relative configuration of colensolide A is determined using standard spectroscopic techniques. Several of the known bromophenols exhibit antibacterial activity and one shows moderate cytotoxicity.     

An ex vivo methodology to assess the lipid peroxidation in stratum corneum

Environmental risks, particularly UV radiation, provide a challenge to the function of the skin barrier. Protective measures such as the use of antioxidant products represent a possible method of providing protection to the skin.This paper reports the development of a non-invasive ex vivo method using tape strips of the outermost layers of stratum corneum (SC) from human volunteers in order to determine the effectiveness of an antioxidant emulsion topically applied to prevent lipid peroxidation (LPO) in the horny layer after an UV irradiation exposure. Two different formulations were used: formulation (A), containing Vitamin A, E and C, and formulation (B) containing fish extract. Both formulations were topically applied in vivo on volunteer forearms; then, a tape stripping of the SC of each volunteer was carried out. The lipid peroxidation was measured ex vivo after an UV irradiation of the SC samples. The amount of SC stripped to evaluate differences in lipid peroxidation, the UV irradiation intensity to form lipid peroxides and the accuracy of lipid peroxide analysis were optimized in this methodology using formulation (A). After an exposure application of seven days, a group of three strips of the outermost layers of SC of volunteers was irradiated with an intensity of 182.7 J/cm² to quantify the LPO inhibition.The percentage of LPO inhibition obtained after topical application of both formulations was in the range of 40–58% demonstrating the effectiveness of the formulations topically applied against lipid peroxidation on human SC. This methodology may be used as a quality control tool to determine ex vivo the percentage of the LPO inhibition on human SC for a variety of antioxidants topically applied.     

Phytoconstituents from the rhizomes of Curcuma aromatica Salisb.

Phytochemical investigation of the chloroform extract of the rhizomes of Curcuma aromatica Salisb. (Zingiberaceae) yielded three new phytoconstituents characterized as n-heneitriacontan-14-one; n-pentatriacontan-5-one; 11α-cyclopentyl-n-decan-1-ol (curcumapentadecanol) along with the known compounds stigmasterol and n-nonacosan-1-ol. The structures of these phytoconstituents have been elucidated on the basis of structural data analysis and chemical reactions.     

Study on structural properties and solution dynamics of zinc complexes with the (N,N-dimethylaminomethyl)ferrocenyl ligand

The reaction of {C,N-[Fe(η⁵-C₅H₅)(η⁵-C₅H₃(CH₂NMe₂)-2)]}Li, (FcN)Li, with zinc chloride affords the diorganozinc complex (FcN)₂Zn (1). In solution, 1 appears as a mixture of rac and meso diastereomers, whereas in the solid state it crystallizes solely as a rac diastereomer. The ratio of rac/meso diastereomers in solution is solvent-, temperature- and concentration-dependent, consistent with an intermolecular exchange between diastereomers. An intramolecular dynamic phenomenon involving dissociation and recoordination of Zn---N bonds was also observed. The reaction of 1 with zinc chloride yields the monoorganozinc compound (FcN)ZnCl (2) as a slightly soluble yellow microcrystalline powder.