HMB体系分子内质子传递的量子化学计算研究

首次利用量子化学半经验AM1方法和从头算HF/6-31G方法对一种新型的苝醌类光? 艏?PQP)-菌生素(HMB)的结构及其分子内质子传递(IPT)进行了理论计算研究，并? 捎弥鸩皆黾硬嗔吹姆椒ㄉ杓屏艘幌盗心Ｐ突衔镆钥悸歉鞑嗔炊訦MBIPT的影响，? 峁推p醌(PQ)的IPT作了对比。同于HMB只有一个分子内氢键，此项研究对解释PQP的光敏活性有十分重要的意义。本研究主要结论：(1)基态时HMB的IPT势垒只有10.0180kJ/mol(反式)和37.9819kJ/mol(顺式)，分子中存在着快速的IPT。(2)侧链对HMB的IPT势垒影响较小，IPT主要受它的大共轭结构和共振模式的影响。(3)过渡态时质子的电荷增加，质子传递势垒与它的电荷变化成线性关系，此关系可推广到其它质子传递体系。(4)HMB的IPT势垒和IPT过程中羟基氧氢键以及氢键的键长变化均成较好的线性关系。(5)虽然只有一个IPT模式，HMB的IPT以及共振模式仍然和PQ十分相似，这是HMB保持光敏活性的基础。     

竹红菌甲素光敏活性的量子化学研究

利用密度泛函B3LYP/6-31G^*方法对茈醌类光敏剂竹红菌甲素hypocrellin A(HA)及其模型化合物的结构性质和分子内氢传递(IHT)过程进行了系统的计算研究,比较了各侧链对分子结构和IHT过程的影响.利用CIS/6-31G^*方法对HA的活性中心苝醌(PQ)及与其结构类似的一系列化合物激发态的IHT过程进行了研究.得到的主要结论包括:(1)常温下,处于基态的HA分子能够进行快速的分子内氢传递.(2)HA的几种模型化合物在基态时的IHT势垒、分子内电荷分布与HA差别很小,这说明侧链对IHT过程的影响不大.(3)HA模型化合物的IHT势垒与氧氢键键长变化和氢键键长变化呈良好的线性关系.(4)IHT反应中伴随着一个电荷分离过程,在氢传递过程中占主导地位的是静电相互作用,这说明此IHT过程本质上是质子转移过程.(5)共轭结构对该类分子的激发态IHT过程具有重要影响,总的趋势是对小共轭体系,单重激发态和三重激发态IHT反应的势能曲线分离,随着分子共轭结构的增大,两个激发态势能曲线逐渐接近,发生交叉的可能性以及交叉的程度也随之增大,即从单重态到三重态发生系间窜越的可能性也随之增大.由于分子内氢传递导致单重激发态和三重激发态势能曲线交叉,致使发生系间窜越,使体系三重态量子效率显著提高,从而提高了茈醌类光敏剂的光敏活性.这说明IHT过程对该类分子保持其光敏活性具有重要的意义.     

A study of light-induced proton transfer from gas phase (radical) cations to reference bases. Bracketing of proton transfer from excited ions and associated reaction kinetics

By use of Fourier transform ion cyclotron resonance, it is shown that protonated naphthalene when excited with laser light of 488 nm is more reactive in proton transfer to reference bases than in its ground state. The excitation leads to reaction with bases for which proton transfer in the ground state is endothermic up to a detected maximum of 60 kJ/mol. For indene radical cations excited at 514.5 nm, it is shown that the rate constant for proton transfer to 3-pentanone is either about 10 or about 100 times lower than the rate constant for relaxation by collisions with 3-pentanone. From the energy deposited in the ions, 0.5-0.6 eV is available for proton transfer to a base which seems reasonable when taking into account a complete randomization of the initially deposited energy.     

Electronic structure and the hydrogen-shift isomerization of hydrogen nitryl HNO2

Summary Electronic structure of hydrogen nitryl HNO₂, a yet not identified entity, and the path of its possible isomerization totrans-HONO have been investigated byab initio SCF and MRD-CI computations using the 6-31G** basis set. HNO₂ isC _2v -symmetric and its ground state (¹ A ₁) is less stable thantrans-HONO by 66 kJ/mol (with the SCF vibrational zero-point energy correction). The lowest two excited singlet states (¹ A ₂ and¹ B ₁) are nearly degenerate, their vertical excitation energies being predicted to be 4.8 eV. The isomerization path is traced by the CASSCF procedure and the activation barrier height is evaluated by the CI treatment. HNO₂ in its ground state isomerizes totrans-HONO by maintaining the planar (C _s-symmetric) structure. The activation energy is calculated to be 171 kJ/mol, which is clearly lower than the calculated H-N bond energy (253 kJ/mol). The transition state seems to be more adequately described as an interacting system of proton and the nitrite anion rather than as a pair of two fragment radicals.     

The reaction of triplet flavin with indole. A study of the cascade of reactive intermediates using density functional theory and time resolved infrared spectroscopy

As a model for riboflavin, lumiflavin was investigated using density functional theory methods (B3LYP/6-31G* and B3LYP/6-31+G**) with regard to the proposed cascade of intermediates formed after excitation to the triplet state, followed by electron-transfer, proton-transfer, and radical[bond]radical coupling reactions. The excited triplet state of the flavin is predicted to be 42 kcal/mol higher in energy than the singlet ground state, and the pi radical anion lies 45.1 kcal/mol lower in energy than the ground-state flavin and a free electron in the gas phase. The former value compares to a solution-phase triplet energy of 49.8 kcal/mol of riboflavin. For the radical anion, the thermodynamically favored position to accept a proton on the flavin ring system is at N(5). A natural population analysis also provided spin density information for the radicals and insight into the origin of the relative stabilities of the six different calculated hydroflavin radicals. The resulting 5H-LF* radical can then undergo radical[bond]radical coupling reactions, with the most thermodynamically stable adduct being formed at C(4'). Vibrational spectra were also calculated for the transient species. Experimental time-resolved infrared spectroscopic data obtained using riboflavin tetraacetate are in excellent agreement with the calculated spectra for the triplet flavin, the radical anion, and the most stable hydroflavin radical.     

Photoinduced energy and electron transfer in phenylethynyl-bridged zinc porphyrin-oligothienylenevinylene-C60 ensembles

Donor-bridge-acceptor triad (Por-2TV-C(60)) and tetrad molecules ((Por)(2)-2TV-C(60)), which incorporated C(60) and one or two porphyrin molecules that were covalently linked through a phenylethynyl-oligothienylenevinylene bridge, were synthesized. Their photodynamics were investigated by fluorescence measurements, and by femto- and nanosecond laser flash photolysis. First, photoinduced energy transfer from the porphyrin to the C(60) moiety occurred rather than electron transfer, followed by electron transfer from the oligothienylenevinylene to the singlet excited state of the C(60) moiety to produce the radical cation of oligothienylenevinylene and the radical anion of C(60). Then, back-electron transfer occurred to afford the triplet excited state of the oligothienylenevinylene moiety rather than the ground state. Thus, the porphyrin units in (Por)-2TV-C(60) and (Por)(2)-2TV-C(60) acted as efficient photosensitizers for the charge separation between oligothienylenevinylene and C(60).     

Metal bacteriochlorins which act as dual singlet oxygen and superoxide generators

A series of stable free-base, Zn(II) and Pd(II) bacteriochlorins containing a fused six- or five-member diketo- or imide ring have been synthesized as good candidates for photodynamic therapy sensitizers, and their electrochemical, photophysical, and photochemical properties were examined. Photoexcitation of the palladium bacteriochlorin affords the triplet excited state without fluorescence emission, resulting in formation of singlet oxygen with a high quantum yield due to the heavy atom effect of palladium. Electrochemical studies revealed that the zinc bacteriochlorin has the smallest HOMO-LUMO gap of the investigated compounds, and this value is significantly lower than the triplet excited-state energy of the compound in benzonitrile. Such a small HOMO-LUMO gap of the zinc bacteriochlorin enables intermolecular photoinduced electron transfer from the triplet excited state to the ground state to produce both the radical cation and the radical anion. The radical anion thus produced can transfer an electron to molecular oxygen to produce superoxide anion which was detected by electron spin resonance. The same photosensitizer can also act as an efficient singlet oxygen generator. Thus, the same zinc bacteriochlorin can function as a sensitizer with a dual role in that it produces both singlet oxygen and superoxide anion in an aprotic solvent (benzonitrile).     

Azomethine ylide-formation from N-phthaloylglycine by photoinduced decarboxylation: A theoretical study

In this work, we report the first CASPT2//CASSCF study of the mechanism of the photodecarboxylation of N-phthaloylglycine. The charge transfer excited state S CT ( 1∏∏*) is initially populated upon irradiation at 266 nm. As a result of a fast internal conversion to the lowest excited singlet state S CT-N ( 1∏∏*), this state becomes a favorable precursor state for proton transfer, which triggers decarboxylation. Actually, the excited state intramolecular proton transfer (ESIPT) and decarboxylation processes proceed in an asynchronous concerted way. The ESIPT process is accomplished in the S CT-N ( 1∏∏*) state, but the CO 2 molecule is finally formed in the ground state via the S CT /S 0 conical intersection. Azomethine ylide is formed in the ground state as a complex with CO 2 . A barrier of ~15 kcal/mol indicates that azomethine ylide is stable in the ground state, which is consistent with the experimental findings. This work provides mechanistic details about the formation of azomethine ylide by photoreaction of N-phthaloylglycine.     

A TD‐DFT study on the cyanide‐chemosensing mechanism of 8‐formyl‐7‐hydroxycoumarin

Proton transfer (PT) and excited‐state PT process are proposed to account for the fluorescent sensing mechanism of a cyanide chemosensor, 8‐formyl‐7‐hydroxycoumarin. The time‐dependent density functional theory method has been applied to investigate the ground and the first singlet excited electronic states of this chemosensor as well as its nucleophilic addition product with cyanide, with a view to monitoring their geometries and spectrophotometrical properties. The present theoretical study indicates that phenol proton of the chemosensor transfers to the formyl group along the intramolecular hydrogen bond in the first singlet excited state. Correspondingly, the nucleophilic addition product undergoes a PT process in the ground state, and shows a similar structure in the first singlet excited state. This could explain the observed strong fluorescence upon the addition of the cyanide anion in the relevant fluorescent sensing mechanism. © 2010 Wiley Periodicals, Inc. J Comput Chem, 2011     

Potential energy profiles of the geometric isomerization and the thermal decomposition of diphosphene HP=PH in the ground and excited electronic states

Summary The geometric isomerization and the dehydrogenation of HP=PH in the ground and some low-lying excited states are investigated by theoretical calculations. The reaction paths are traced by either the CASSCF or UHF-SCF calculations using the 6-31G(d,p) basis functions, and the accompanying energy changes are calculated by the MRD-CI method employing the [5s3p1d]/[2s1p] basis functions. The barrier heights for the trans-to-cis isomerization, by the planar inversion and the nonplanar twisting, in the ground state are calculated to be 265 and 144 kJ/mol (with the vibrational zero-point energy corrections), respectively. The latter barrier is noticeably lower than the H-P and the P-P bond dissociation energies oftrans-HP=PH (¹A_g), which are 304 and 271 kJ/mol, respectively. The ground-state HP₂ radical (²A'), which is to be formed by the dehydrogenation of HP=PH, should suffer further decomposition into P₂ (¹ _g ⁺ ) and H with an activation energy of 139 kJ/mol. The lowest excited state of HP₂ is found to be a hydrogen-bridged 3-electron system (²A₂) having an isosceles triangle structure. It has proved to be formed by the dehydrogenation of the lowest excited singlet state (¹B) of HP=PH via a transition state which lies 194 kJ/mol above the¹B state. The excited HP₂ (²A₂) is state-correlated with P₂ (³_u)+H.     

Theoretical study on proton tautomerism of chryosphanol and its analogues in the ground and excited states

Proton tautomerism of 1,8-dihydroxy-3-methyl-anthraquinone and its analogues were studied using HF and CIS methods with 6-31g(d,p) basis set for the ground and singlet excited states. The calculations indicate that the compound exists two strong intramolecular hydrogen bonds (IHB), and shows similar characters in its proton transfer processes considering the geometries and Mulliken charge population. Calculation results further show that intramolecular proton transfer (IPT) is not favored in view of the energy trend for chryosphanol, which has two hydrogens of hydroxyl groups bond with a common oxygen of carbonyl group and exists two IHBs in the peri region. However, it exhibits normal intramolecular proton transfer for the derivatives of chryosphanol, which have only one pair of adjacent hydroxyl group and carbonyl group existing in the peri region. Hereby, it can be conjectured from a theoretical point of view that IPT is absent in the similar structure such as hypericin’s peri region. Calculation results on the photophysical process show that the isomerization process is competitive with the intersystem crossing process, which facilitates the increase of triplet state quantum efficiency and photosensitive activity.     

Thermochemical studies of benzoylnitrene radical anion: the N-H bond dissociation energy in benzamide in the gas phase

The thermochemical properties of benzoylnitrene radical anion, C6H5CON-, were determined by using a combination of energy-resolved collision-induced dissociation (CID) and proton affinity bracketing. Benzoylnitrene radical anion dissociates upon CID to give NCO- and phenyl radical with a dissociation enthalpy of 0.85 +/- 0.09 eV, which is used to derive an enthalpy of formation of 33 +/- 9 kJ/mol for the nitrene radical anion. Bracketing studies with the anion indicate a proton affinity of 1453 +/- 10 kJ/mol, indicating that the acidity of benzamidyl radical, C6H5CONH, is between those of benzamide and benzoic acid. Combining the measurements gives an enthalpy of formation for benzamidyl radical of 110 +/- 14 kJ/mol and a homolytic N-H bond dissociation energy in benzamide of 429 +/- 14 kJ/mol. Additional thermochemical properties obtained include the electron affinity of benzamidyl radical, the hydrogen atom affinity of benzoylnitrene radical anion, and the oxygen anion affinity of benzonitrile.     

2-(2-巯苯基)苯并噁唑分子内质子转移取代基电子效应的密度泛函理论研究

在B3LYP/6-31G(d,p)和TDB3LYP/6-31++G(d,p)//CIS/6-31G(d,p)水平上研究了2-(2-巯苯基)苯并噁唑及其衍生物基态和激发态分子内质子转移现象,并探讨取代基电子效应对分子内质子转移的影响,研究结果表明,在基态时,硫醇式异构体为优势构象,供电子取代基使基态分子内正向质子转移能垒(烯醇式→酮式)升高;而吸电子取代基则可降低能垒,有利于基态分子内质子转移并有助于硫酮式异构体的稳定.在激发态时,硫酮式结构为优势构象,所研究的2-(2-巯苯基)苯并噁唑化合物及衍生物均可以发生无能垒或低能垒(≤1.5kJ/mol)的激发态分子内质子转移.巯苯基部分是激发态失活的主要活性部分,供电子基团有利于激发态的质子转移,吸电子基团使激发态跃迁困难,不利于激发态的质子转移.     

Photoinduced electron transfer between chlorophylls (a/b) and fullerenes (C60/C70) studied by laser flash photolysis.

Photoinduced electron-transfer processes in the systems of chlorophylls (Chl) (chlorophyll-a [Chl-a] and chlorophyll-b) and fullerenes (C60/C70) in both polar and non-polar solvents have been investigated with nanosecond laser photolysis technique, observing the transient spectra in the visible/near-IR regions. By the excitation of Chl in benzonitrile (BN) it has been proved that electron transfer takes place from the triplet excited states of Chl to the ground states of C60/C70. By the excitation of C70 in BN electron transfer takes place from the ground states of Chl to the triplet excited state of C70. In both Chl the rate constants and quantum yields for the electron-transfer processes are as high as those of zinc porphyrins and zinc phthalocyanines, indicating that the long alkyl chains of Chl play no role in retarding the electron transfer. The rate constant for the electron-mediating process from the radical anion of C70 to octylviologen dication yielding the octylviologen radical cation was evaluated. The back electron-transfer process from the viologen radical cation to the radical cation of Chl-a takes place in a longer time-scale, indicating that a photosensitized electron-transfer/electron-mediating cycle is achieved.     

腐植酸作用下γ-六氯环己烷在冰相中的光转化

研究了腐植酸(HA)存在下冰相体系中γ-六氯环己烷(γ-HCH)的光转化规律.结果表明,HA浓度对γ-HCH的光转化率呈现低浓度促进而高浓度抑制的现象;盐离子浓度、NO_2~-及NO_3~-对γ-HCH的光转化率均有促进作用;低浓度Fe~(3+)对γ-HCH的光转化率有促进作用,当Fe~(3+)的浓度增大到50μmol/L时,呈现抑制效应;γ-HCH在不同p H值条件下光转化速率的大小顺序为碱性中性酸性.冰相中HA通过产生单线态氧(~1O_2)、羟基自由基(·OH)及三重激发态(HA*)加速γ-HCH的光转化.HA存在下γ-HCH的光转化产物主要是五氯环己烯、邻二氯苯和对二氯苯、一氯苯,光转化过程中~1O_2通过消耗中间产物间接加速了γ-HCH的光转化过程.     

Excited state proton transfer in guanine in the gas phase and in water solution: a theoretical study

Theoretical investigations were performed to study the phenomena of ground and electronic excited state proton transfer in the isolated and monohydrated forms of guanine. Ground and transition state geometries were optimized at both the B3LYP/6-311++G(d,p) and HF/6-311G(d,p) levels. The geometries of tautomers including those of transition states corresponding to the proton transfer from the keto to the enol form of guanine were also optimized in the lowest singlet pipi* excited state using the configuration interaction singles (CIS) method and the 6-311G(d,p) basis set. The time-dependent density function theory method augmented with the B3LYP functional (TD-B3LYP) and the 6-311++G(d,p) basis set was used to compute vertical transition energies using the B3LYP/6-311++G(d,p) geometries. The TD-B3LYP/6-311++G(d,p) calculations were also performed using the CIS/6-311G(d,p) geometries to predict the adiabatic transition energies of different tautomers and the excited state proton transfer barrier heights of guanine tautomerization. The effect of the bulk aqueous environment was considered using the polarizable continuum model (PCM). The harmonic vibrational frequency calculations were performed to ascertain the nature of potential energy surfaces. The excited state geometries including that of transition states were found to be largely nonplanar. The nonplanar fragment was mostly localized in the six-membered ring. Geometries of the hydrated transition states in the ground and lowest singlet pipi* excited states were found to be zwitterionic in which the water molecule is in the form of hydronium cation (H3O(+)) and guanine is in the anionic form, except for the N9H form in the excited state where water molecule is in the hydroxyl anionic form (OH(-)) and the guanine is in the cationic form. It was found that proton transfer is characterized by a high barrier height both in the gas phase and in the bulk water solution. The explicit inclusion of a water molecule in the proton transfer reaction path reduces the barrier height drastically. The excited state barrier height was generally found to be increased as compared to that in the ground state. On the basis of the current theoretical calculation it appears that the singlet electronic excitation of guanine may not facilitate the excited state proton transfer corresponding to the tautomerization of the keto to the enol form.     

Excited-state proton transfer through water bridges and structure of hydrogen-bonded complexes in 1H-pyrrolo[3,2-h]quinoline: adiabatic time-dependent density functional theory study

Proton transfer reaction is studied for 1H-pyrrolo[3,2-h]quinoline-water complexes (PQ-(H(2)O)(n), n = 0-2) in the ground and the lowest excited singlet states at the density functional theory (DFT) level. Cyclic hydrogen-bonded complexes are considered, in which water molecules form a bridge connecting the proton donor (pyrrole NH group) and acceptor (quinoline nitrogen) atoms. To understand the effect of the structure and length of water bridges on the excited-state tautomerization in PQ, the potential energy profile of the lowest excited singlet state is calculated adiabatically by the time-dependent DFT (TDDFT) method. The S(0) --> S(1) excitation of PQ is accompanied by significant intramolecular transfer of electron density from the pyrrole ring to the quinoline fragment, so that the acidity of the N-H group and the basicity of the nitrogen atom of the quinoline moiety are increased. These excited-state acid-base changes introduce a driving force for the proton transfer reaction. The adiabatic TDDFT calculations demonstrate, however, that the phototautomerization requires a large activation energy in the isolated PQ molecule due to a high energy barrier separating the normal form and the tautomer. In the 1:1 cyclic PQ-H(2)O complex, the energy barrier is dramatically reduced, so that upon excitation of this complex the tautomerization can occur rapidly in one step as concerted asynchronous movements of the two protons assisted by the water molecule. In the PQ-(H(2)O)(2) solvate two water molecules form a cyclic bridge with sterically strained and unfavorable hydrogen bonds. As a result, some extra activation energy is needed for initiating the proton dislocation along the longer hydrogen-bond network. The full tautomerization in this complex is still possible; however, the cooperative proton transfer is found to be highly asynchronous. Large relaxation and reorganization of the hydrogen-bonded water bridge in PQ-(H(2)O)(2) are required during the proton translocation from the pyrrole NH group to the quinoline nitrogen; this may block the complete tautomerization in this type of solvate.     

Fullerenes linked to photosynthetic pigments

The synthesis and photochemical characterization of two porphyrin-fullerene dyads, two zinc porphyrin-fullerene dyads, and a carotenobuckminsterfullerene are reviewed. In these molecules, the fullerene first excited singlet state may be formed by direct excitation or by singlet-singlet energy transfer from the attached pigment. In polar solvents, the dominant singlet-state decay pathway is photoinduced electron transfer to yield the pigment radical cation and fullerene radical anion. This charge-separated state has a long lifetime relative to the time constant for charge separation. In toluene, in cases where photoinduced electron transfer is slow for thermodynamic reasons, the fullerene singlet state decays by intersystem crossing, and the resulting triplet energy is partitioned between the components of the dyad according to their triplet energies. The results suggest that fullerenes can be valuable components of photochemically active multicomponent molecular systems.     

Proton transfer reaction in 4-hydroxy-3-formyl benzoic acid in protic solvents at room temperature and 77K and some theoretical aspects

Proton transfer processes of 4-hydroxy-3-formyl benzoic acid (HFBA) have been studied in a number of different protic solvents by means of absorption, emission and nanosecond transient spectroscopy at room temperature and 77K. Intermolecular interaction occurs in polar protic solvents only in presence of a base in the ground state whereas in the excited state, intermolecular complex formation and proton transfer occurs even in pure protic solvents. The dianion is detected in water, methanol, ethanol and TFE in presence of base. HFBA shows phosphorescence in pure ethanol at 77K. The occurrence of phosphorescence is due to rupture of the intramolecular bond and rotation of the formyl group. We have calculated quantum yields of fluorescence and also estimated decay rates from nanosecond measurements. The energetics of the ground and excited state proton transfer in HFBA have been investigated at the AM1 level of approximation. The ground singlet is predicted to have a large activation barrier on the proton transfer path, while the barrier height is much lower on the corresponding excited singlet surface.     

尿酸质子转移反应的理论研究I——分子内质子转移研究

使用量子化学中的Hartree-Fock方法和密度泛函理论中的B3LYP方法，分别在3－21G^*和6－31G（d)水平上，计算了尿酸分子从三羰基异构体向三羟基异构体的转化。结果表明，转化过程经历了单羟基和双羟基异构体2种中间物和3种过渡态时的分子内质子转移（IPT），转移中的H原邻近的N，O和C原子形成了具有四元环结构的过渡态。随着IPT的进行，N－H键逐渐被削弱和断裂，O－H键则逐渐生成。3个反应的活化能分别为190.3kJ/mol,181.4kJ/mol和249.9kJ/mol(B3LYP/6-31G(d))。较高的活化能表明在室温下，无催化剂的IPT难以进行。