Studies on Interaction Between Gallocyanine and DNA

IntroductionConsiderable attention has been focused onnew DNA- binding and DNA- modifying agents fromnatural ones to wholly synthetic designs due totheir usage as probes of deciphering the structureand the function of nucleic acids and as potentialchemotherapeutic agents[1— 4] . The application ofthose molecules must be based on the preciseunderstanding of the structural details about thebinding of the agents with the target molecule,double- helical DNA. The interaction of smallmolecules …     

Electrochemical and Spectroscopic Studies on the Interaction of Malachite Green with DNA and Its Application

The interaction of malachite green (MG) with double‐stranded DNA (dsDNA) in pH 7.0 Britton–Robinson (B–R) buffer solution was investigated by electrochemical and spectrophotometric methods. Within the potential scan range of ?1.0 to +1.5 V (vs. SCE), MG has two oxidative peaks at 0.547 V and 0.833 V and one reductive peak at 0.362 V on cyclic voltammogram at the scan rate of 0.20 V/s. After the addition of dsDNA into the MG solution, the oxidative peak current at 0.547 V decreases obviously. The electrochemical parameters, such as the charge transfer coefficient (α), the surface reaction rate constant (k_s) and the diffusion coefficient (D), were calculated and compared between in the absence and presence of dsDNA. The results show that these parameters of MG after adding dsDNA have greatly changed, which indicates that an electrochemical active complex was formed. The interaction mechanisms of MG with dsDNA are discussed in some details from the electrochemistry and UV‐vis spectrophotometry. The reduction of the peak current of MG after adding dsDNA was further used for the quantification of dsDNA by differential pulse voltammetry (DPV). The linear range for dsDNA is in the range of 10.0–100.0 μg/mL with the linear regression equation as Δi_p (μA)=0.065+0.0096 C (μg/mL) and the detection limit of 6.0 μg/mL (3σ). The influences of coexisting substances were investigated and artificial samples were determined with satisfactory results.     

烟酰胺与DNA相互作用的电化学研究

利用示差脉冲伏安法研究了烟酰胺(NA)与小牛胸腺DNA在pH 8.0条件下相互作用的电化学行为.双链DNA(dsDNA)或单链DNA(ssDNA)的存在导致NA的峰电流明显降低且峰电位负移,表明NA与DNA发生相互作用,生成了复合物,且其作用模式主要是静电模式,但NA与dsDNA的相互作用强于与ssDNA的相互作用,可用于识别dsDNA和ssDNA.通过dsDNA加入前后峰电流的变化,计算得出NA与dsDNA结合常数β=4.946×10(11),结合位点数m=3.此外,NA的峰电流Ip与DNA质量浓度在1～14mg/L的范围内呈线性关系,线性回归方程为Ip(10-5A)=-0.03451cDNA(mg/L)+1.7408,相关系数R为0.9998.该法具有良好的回收率和选择性,可用于样品中DNA的测定.     

亚甲基蓝与DNA相互作用的电化学研究

近年来,小分子化合物与DNA相互作用的研究是生命科学研究的热门话题。特别是一些药物和毒物分子与DNA的作用[1-2],如何影响DNA的生理和化学物理性质,如何影响DNA的转译和复制,都是十分重要的课题。在医药研究中,DNA与靶向分子相互作用的研究不仅对阐述一些抗肿瘤、抗病毒药物及     

Spectroscopic Electrochemical Studies of Interaction Between Fuchsin Basic DNA

Visible spectroscopic and electrochemical methods were used to study the interactions between DNA and fuchsin basic(FB). FB has an irreversible electro-oxidation peak in 5 mmol/L Tris-HCl buffer solution at pH = 7.4 on a glassy carbon electrode(GCE). After adding certain concentration of dsDNA, the oxidation peak current of FB decreases, but the peak potential hardly changs. The visible absorption spectroscopic study shows that the binding mode of FB to dsDNA is intercalative binding and electrostatic binding when the ratio of the concentration of dsDNA to FB is smaller than 0. 2, and a new substance, which produces a new absorption peak, is obtained via a covalent binding between dsDNA and FB apart from intercalative binding and electrostatic binding when the ratio of the concentration of dsDNA to FB is larger than 0. 2. The visible absorption spectra varies no longer when the ratio of the concentration of dsDNA to FB is larger than 1.5. A mean binding ratio of dsDNA to FB was determined to be 1.4: 1,suggesting that two complexes FB-dsDNA and FB-2dsDNA be formed. The interaction between FB and ssDNA was only electrostatic binding. The more powerful interaction of FB with dsDNA than with ssDNA may be applied for the recognition of dsDNA and ssDNA, and in DNA biosensor as hybridization indicator.     

Spectroscopic and Electrochemical Studies of the Interaction Between Fuchsin Basic and DNA

Introduction DNAbiosensorsareacompletelynewtypeoftech nologicalconceptionsbyusingspecificaffinitybetween mattersinlivingbeingstodistinguishdirectlyand quicklysequence specificDNA[1].Withtherapidde velopmentofgeneticengineering,oneofthekeyissues needtobere…     

维生素B12与DNA相互作用的电化学研究

维生素B12与DNA相互作用的电化学研究;维生素B12; DNA; 循环伏安法; 紫外可见吸收光谱法     

Electrochemical and Spectroscopic Study of the Interaction of Indirubin with DNA

The interaction of indirubin with DNA was studied by differential pulse voltammetry (DPV) and linear sweep voltammetry (LSV) at the bare or DNA‐modified electrode and UV‐vis or IR spectra. As a result of intercalating of this drug into the double helical structure of DNA, the DPV of indirubin shows that peak potentials shift and peak currents decrease with the addition of DNA. UV‐vis spectra exhibits that the absorption intensity of indirubin at 538.7 nm^?1 decreases, which indicates that the anticancer herbal drug indirubin binds DNA. In addition, IR‐spectra of DNA and DNA‐indirubin adduct imply indirubin interacts with the phosphate groups of DNA by hydrogen bond or electrostatic interaction. Under our experiment conditions, the decrease of peak current is proportional to DNA concentration, which can be applied to estimate DNA concentration. The results indicate that the herbal drug indirubin can interfere with the DNA by intercalating into the double helix of DNA and interacting with the phosphate groups of DNA.     

异烟肼与牛血清白蛋白相互作用的光谱和电化学研究

本文用自制L-天冬氨酸修饰电极(PLA/GCE),采用循环伏安法研究了牛血清白蛋白(BSA)与异烟肼(INH)的相互作用,并与荧光光谱法、紫外-可见光谱法进行了比较。使用循环伏安法和荧光光谱法,测得异烟肼与牛血清白蛋白的结合常数K分别为1.544×10~4、1.479×10~4 L/mol,结合位点数均接近1.1。实验测得异烟肼对牛血清白蛋白是静态猝灭。异烟肼的浓度与牛血清白蛋白的荧光强度的降低在2.5×10~(-7)~4.5×10~(-4) mol/L范围内呈线性关系,检出限为1.0×10~(-7) mol/L。BSA的浓度与异烟肼的氧化峰电流的下降在1.0×10~(-9)~5.0×10~(-5) mol/L范围内呈线性关系,检出限为5.0×10~(-10) mol/L。该方法可用于样品中异烟肼和牛血清白蛋白的测定。     

尼古丁与DNA相互作用的电化学研究

用线性扫描伏安法、循环伏安法及光谱法研究了尼古丁与DNA在0.2 mol/LpH 6.0的H2C2O4缓冲溶液中的相互作用。研究结果显示,随着DNA的加入,尼古丁峰电流降低,峰电位正移,说明尼古丁是以嵌入形式与DNA结合,生成了一种结合比为2∶1的非电活性化合物,结合常数β为1.56×109。并用多种电化学方法求得了电极过程的动力学参数。     

Electrochemical Studies for the Interaction of DNA with an Irreversible Redox Compound – Hoechst 33258

An electrochemical equation suitable for examining the interaction of irreversible redox compounds with DNA is established. According to the equation, diffusion coefficients of both free and binding compounds (D_f , D_b), binding constant (K) and binding site size (s) of compounds with DNA could be obtained simultaneously by nonlinear fit analysis of electrochemical data. Bis‐benzimidazole derivative (Hoechst 33258), as an irreversible redox compound, was investigated for its electrochemical behavior and the interaction with natural fish sperm DNA (fsDNA) using cyclic voltammetry, chronocoulometry, bulk electrolysis and scanning electrochemical microscope technique. A nonlinear fit analysis of the experimental data yielded: D_f=8.3×10^?5 cm² s^?1, D_b=6.0×10^?6 cm² s^?1, K=2.1×10⁸ cm³ mol^?1, s=3.9. The overall results suggest that Hoechst 33258 binds tightly to the minor groove of fsDNA and covers four base pairs.     

Electrochemical Studies of Anticancer Herbal Drug Sophoridine and Its Interaction with DNA

Sophoridine is a new anticancer herbal drug with remarkable antitumor effect and lower toxicity. In this paper, the electrochemical investigation of sophoridine and its interaction with DNA is reported. In 0.1 mol L^?1 phosphate buffer solution (pH 7.0), sophoridine exhibited excellent electrochemical activity. In the presence of DNA, the peak current of sophoridine decreased in a quantitative fashion and the peak potential shifted to a more positive potential value. It suggests the dominance of intercalative interaction. Importantly, as to the interaction between sophoridine and DNA in solution, characteristic parameters such as the binding stoichiometry and association equilibrium constant according to the Hill model for cooperative binding have been determined.     

DNA与5-氟尿嘧啶相互作用的电化学和谱学研究

以电位控制共价组装法制得的DNA修饰电极为工作电极, 采用循环伏安和方波脉冲伏安法, 以亚甲蓝(MB)为电活性指示剂, 研究了非电活性抗癌药物5-氟尿嘧啶(5-FU)与DNA的相互作用, 还结合紫外-可见光谱进一步研究了这种相互作用. 循环伏安测试结果表明: 5-FU与DNA在电极表面反应的过程为可逆电化学反应-化学反应偶合(EC)过程. 当扫描速度较低时, EC反应是扩散控制过程; DNA与电活性物质MB通过静电吸附相互结合, 抗癌药物5-FU与DNA通过插入作用相互结合. 本研究对于遗传工程中以DNA为靶标的药物设计有重要的意义.     

Electrochemical Behaviors of Resveratrol and Its Interaction with DNA

Electrochemical behavior of resveratrol was studied in Britton‐Robinson (B‐R) buffer solution (pH = 4.0) at glassy carbon electrode (GCE) using cyclic voltammetry (CV). Resveratrol showed an irreversible anodic peak at 0.570 V which was involving one electron and one proton. Also, the interaction of resveratrol with double‐stranded fish sperm DNA was investigated by linear sweep voltammetry (LSV) and UV‐vis spectra. The results showed that peak potentials shifted to more positive value and peak currents decreased in electrochemical experiment and the maximum absorption decreased with red shift in UV‐vis spectra experiment with the addition of DNA, indicating the resveratrol interacted with DNA by intercalating into the double helix of DNA. Besides, the binding of resveratrol with DNA, analyzed in terms of the cooperative Hill model, yields the association constant K_a = 3.18 × 10⁵ and a Hill coefficient m = 1.06.     

更生霉素-DNA反应的电化学研究

研究了更生霉素(Act-D)在活化浸蜡石墨电极上的电化学特性,发现在-0.19和-0.51V分别出现一个灵敏的氧化峰和还原峰,加入DNA使Act-D的峰电流明显降低,生成了非电活性络合物.采用电化学方法研究了Act-D与小牛胸腺DNA的结合平衡,根据不可逆电活性分子与DNA相互作用的电化学公式对实验数据进行非线性拟合,获得了Act-D的扩散系数、Act-D与DNA的结合常数和结合位点数等重要信息,发现Act-D与DNA的8个碱基对紧密结合,其侧链加强了结合程度.     

光谱和电化学方法研究黄芩素与核酸相互作用的机理

在pH=3.22的NaAc-HAc溶液中,应用循环伏安法、方波伏安法、荧光光谱法、紫外可见光谱法和黏度法研究了黄芩素(BAI)与鲱鱼精子DNA（fsDNA）之间的相互作用,发现二者通过沟槽作用形成一电活性较高的复合物,fsDNA为BAI提供了一个低极性的疏水环境导致BAI的峰电流显著增强,增强的峰电流与fsDNA在7.0×10-8~7.0×10-6 g/mL浓度范围内呈正比,由此建立了一种测定核酸的新方法,检测限达到4.1×10-8 g/mL。     

Synthesis,Spectroscopic, and Electrochemical Properties of Four Novel Trinuclear RuII Polypyridyl Complexes Containing Diazafluorene

Four tripodal ligands L^1–4 derived from 4,5‐diazafluoren‐9‐one were synthesized. L^1–2 formed by the reaction of 4,5‐diazafluoren‐9‐oxime with 1,3,5‐tris(bromomethyl)benzene, and 1,1,1‐tris(p‐tosyloxymethyl)propane, respectively and L^3–4 formed by the condensation of 9‐(4‐hydroxy)phenylimino‐4,5‐diazafluorene with 1,3,5‐tris(bromomethyl)benzene, and 1,1,1‐tris(p‐tosyloxymethyl)propane, respectively. Four trinuclear complexes [(bpy)₆Ru₃L^1–4](PF₆)₆ ( Ru‐L^1–4 ) were obtained by reaction of Ru(bpy)₂Cl₂ · 2H₂O with ligands L^1–4. The photophysical behaviors of these complexes were investigated by UV/Vis absorption and emission spectrometry. The complexes display metal‐to‐ligand charge transfer absorptions at 441–445 nm and emissions at 571–578 nm. Cyclic voltammetry data of the complexes show one Ru^II‐centered oxidation and three successive ligand‐centered reductions.     

吡虫啉与牛血红蛋白相互作用的光谱研究

利用紫外可见光谱和荧光光谱研究了在生理pH值条件下农药吡虫啉与牛血红蛋白(BHb)的相互作用。实验结果表明:吡虫啉分子与BHb发生反应生成复合物,导致BHb内源荧光的猝灭,该猝灭属于静态猝灭。测定了不同温度下该反应的表观结合常数、结合位点数及结合热力学参数,热力学参数的变化表明上述作用过程是一个熵增加、自由能降低的自发分子间作用过程,吡虫啉与BHb之间以静电和疏水作用力为主;并用同步荧光光谱法探讨了吡虫啉对BHb构象的影响。     

Studies on the Interaction of Novel Organogermanium Sesquioxides with DNA

The affinity and mode of interaction of four novel organogermanium sesquioxides with calf thymus DNA(CT-DNA) and two synthetic oligonucleotides, d(AT)₂₂d(AT)₂₂ and d(GC)₂₂d(GC)₂₂, were investigated by a combination of absorption spectroscopy, DNA thermal denaturalization method, viscosity method, fluorometric technique, and competitive binding study with ethidium bromide(EB). The results show that the organogermanium compounds can interact with DNA by intercalation, the binding ability of the compounds to CT-DNA and the synthetic oligonucleotides was found to be modest(in comparison to the proven intercalators), with binding constants on the order of 10³―10⁵ L/mol, respectively. Generally, the binding of the organogermanium sesquioxides with naphthalene moiety to DNA is stronger than that of the compounds with anthraquinone moiety. And the compounds with anthraquinone moiety have preference for binding to AT-rich duplexes, whereas the compounds with naphthalene moiety have a little preference for binding to GC-rich duplexes. DNA may be the primary effect target.