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蛋白质溶液结构及动力学的核磁共振研究 总被引:2,自引:2,他引:0
高场液相核磁共振技术作为解析高分辨率蛋白质结构的两大主要手段之一,在近二十几年的时间里得到了迅猛的发展. 一方面,随着谱仪硬件技术、核磁脉冲技术和蛋白质标记技术的不断发展,液相核磁共振技术所能够研究的蛋白质不断突破分子量的限制,可以达到几万,甚至几十万. 另一方面,液相核磁共振技术成功地应用于蛋白质分子动力学的研究中,是目前唯一能够对蛋白质多个位点同时进行动力学研究的实验方法,并且仍在不断地创新、发展和完善中. 本文从蛋白质溶液结构的解析和动力学的研究两个主要方面对液相核磁共振研究的基本方法进行简要的介绍,并结合实例介绍一些最新的研究进展. 相似文献
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核磁共振二维扩散序谱(DOSY)实验测定溶液中分子自扩散系数时,扩散系数维的数据点及其数字分辨率直接影响了测定值的精度.在较系统地确定了DOSY实验本身偏差范围的基础上,本文研究了扩散系数维不同的数字分辨率对测定值的影响,包括其引入偏差的来源以及形成偏差的大小.由于不同的溶液条件下分子扩散系数的改变可直接用于表征分子结构或状态的变化,本文提出的相对数字分辨率与扩散系数相对变化值的直接比较,可直观地表明数字分辨率对扩散系数测定值的影响. 相似文献
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在GS-221高速摄影测量仪中,测角信息采集与处理速度的快慢是重要性能指标之一。本文讨论了如何在尽可能短的时间内对测角信息进行采集和处理的软件实现方法。 相似文献
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核磁共振氢谱(Proton Nuclear Magnetic Resonance,1H NMR)是中药指纹图谱中一种鉴定和控制植物中药质量的新方法.本文采用CPMG(Carr-Purcell-Meiboom-Gill)脉冲序列采集了杜仲提取物的1H NMR谱,通过完整还原振幅频率表(Complete Reduction to Amplitude-Frequency Table,CRAFT)分析技术对杜仲指纹图谱进行特征指纹分析,将待目标合物的信号从混合物图谱中剥离出来,实现了不分离样品而分析目标化合物信息的目的,从而对杜仲的特征化合物——松脂醇二葡萄糖苷(Pinoresinol Glucoside,PDG)进行了定性和定量分析.结果显示贵阳药用植物园所得杜仲的PDG含量为0.275 6%,相对标准偏差(Relative Standard Deviation,RSD)为1.69%,与高效液相色谱(High Performance Liquid Chromatography,HPLC)定量分析结果(含量为0.269 6%,RSD为0.65%)基本一致.另外,通过NMR检测与多变量数据建模相结合分析了杜仲提取物的全指纹图谱,结果显示同一采收期不同产地的杜仲药材有显著差异,这表明该方法可用于鉴定不同产地的药材,具有一定的实用意义. 相似文献
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Spatial encoding is a particular kind of spin manipulation that enables the acquisition of multidimensional NMR spectra within a single scan. This encoding has been shown to possess a general applicability and to enable the completion of arbitrary nD NMR acquisitions within a single transient. The present study explores its potential towards the acquisition of 2D DOSY spectra, where the indirect dimension is meant to encode molecular displacements rather than a coherent spin evolution. We find that in its simplest form this extension shows similarities with methods that have been recently discussed for the single-scan acquisition of this kind of traces; still, a number of advantageous features are also evidenced by the “ultrafast” modality hereby introduced. The principles underlying the operation of this new single-scan 2D DOSY approach are discussed, its use is illustrated with a variety of sequences and of samples, the limitations of this new experiment are noted, and potential extensions of the methodology are mentioned. 相似文献
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Signal overlap in the NMR dimension significantly complicates the construction and analysis of 2D diffusion-ordered (DOSY) spectra. Such problems can often be reduced or even eliminated by extending the NMR domain of a DOSY experiment into two dimensions, giving a 3D-DOSY spectrum. To date such experiments have generally sacrificed some signal-to-noise ratio and have required extensive and time-consuming phase cycling. A new family of pulse sequences with internal diffusion encoding (IDOSY) has been introduced which avoids both of these problems. It is often straightforward to incorporate convection compensation in such sequences at no cost in signal-to-noise ratio. Here, some of the problems caused by convection in DOSY are described and illustrated, and the efficacy of convection compensation in the 2DJ-IDOSY and COSY-IDOSY experiments is demonstrated. 相似文献
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The DOSY Toolbox is a free programme for processing PFG NMR diffusion data (sometimes loosely referred to as DOSY data), distributed under the GNU General Public License. NMR data from three major manufacturers can be imported and all processing is done in a user-friendly graphical user interface. The Toolbox is completely free-standing in the sense that all necessary basic processing of NMR data (e.g., Fourier transformation and phasing) is catered for within the programme, as well as a number of methods specific to DOSY data (e.g., DOSY and SCORE). The programme is written in MATLAB® and as such can be run on any platform, but can also run independent of MATLAB® in a free-standing compiled version for Windows, Mac, and Linux. 相似文献
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Diagnostic analysis of experimental artefacts in DOSY NMR data by covariance matrix of the residuals
Huo R van de Molengraaf RA Pikkemaat JA Wehrens R Buydens LM 《Journal of magnetic resonance (San Diego, Calif. : 1997)》2005,172(2):346-358
Multivariate curve resolution (MCR) has been applied to separate pure spectra and pure decay profiles of DOSY NMR data. Given good initial guesses of the pure decay profiles, and combined with the nonlinear least square regression (NLR), MCR can result in good separation of the pure components. Nevertheless, due to the presence of artefacts in experimental data, validation of a MCR model is still necessary. In this paper, the covariance matrix of the residuals (CMR), obtained by postmultiplying the residual matrix with its transpose, is proposed to evaluate the quality of the results of an experimental data set. Plots of the rows of this matrix give a general impression of the covariance in the frequency domain of the residual matrix. Different patterns in the plot indicate possible causes of experimental imperfections. This new criterion can be used as diagnosis in order to improve experimental settings as well as suggest appropriate preprocessing of DOSY NMR data. 相似文献
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Alexander A. Marchione Elizabeth F. McCord 《Journal of magnetic resonance (San Diego, Calif. : 1997)》2009,201(1):34-38
Diffusion-ordered (DOSY) NMR techniques have for the first time been applied to the spectral separation of mixtures of fluorinated gases by diffusion rates. A mixture of linear perfluoroalkanes from methane to hexane was readily separated at 25 °C in an ordinary experimental setup with standard DOSY pulse sequences. Partial separation of variously fluorinated ethanes was also achieved. The constants of self-diffusion of a set of pure perfluoroalkanes were obtained at pressures from 0.25 to 1.34 atm and temperatures from 20 to 122 °C. Under all conditions there was agreement within 20% of experimental self-diffusion constant D and values calculated by the semiempirical Fuller method. 相似文献
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Huo R Wehrens R Buydens LM 《Journal of magnetic resonance (San Diego, Calif. : 1997)》2004,169(2):2972-269
The quality of DOSY NMR data can be improved by careful pre-processing techniques. Baseline drift, peak shift, and phase shift commonly exist in real-world DOSY NMR data. These phenomena seriously hinder the data analysis and should be removed as much as possible. In this paper, a series of preprocessing operations are proposed so that the subsequent multivariate curve resolution can yield optimal results. First, the baseline is corrected according to a method by Golotvin and Williams. Next, frequency and phase shift are removed by a new combination of reference deconvolution (FIDDLE), and a method presented by Witjes et al. that can correct several spectra simultaneously. The corrected data are analysed by the combination of multivariate curve resolution with non-linear least square regression (MCR-NLR). The MCR-NLR method turns out to be more robust and leads to better resolution of the pure components than classic MCR. 相似文献
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利用核磁共振方法研究了辣椒碱β-环糊精包合物的化学计量比、空间结构信息及其在水溶液中的自扩散系数. 通过测定不同浓度比的辣椒碱和β-环糊精混合溶液的 1H NMR数据,绘制Job's曲线,辣椒碱和β-环糊精的Job's曲线均在r=0.5处出现拐点. 同时测定了该包合物的2D ROESY和DOSY谱图,ROESY谱图中NOE交叉信号出现在辣椒碱的H-1~H-8和β-环糊精的H-3′、H-5′、H-6′之间,DOSY测得β-环糊精和辣椒碱形成包合物前后的表观自扩散系数. 结果表明,辣椒碱β-环糊精包合物的主客体分子的化学计量比为1∶1,辣椒碱分子的异丙基端从β-环糊精的宽口端进入疏水腔,其中H-1~H-8部分在空腔内部,包合物的自扩散系数为2.95×10-10m2/s. 相似文献
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介绍了多道ICP-AES多元素瞬时信号检测处理集成软件的研制过程,应用该软件实现了多道ICP-AES和多种瞬时进样技术在线联用的信号采集、处理。 相似文献
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高效液相色谱-原子荧光光谱联用中的连续数字信号采集和处理 总被引:1,自引:0,他引:1
本文报道了利用Visual C 编写原子荧光光谱仪的数字信号采集和处理软件,成功地解决了原子荧光光谱仪作为联用技术在线检测器的数据采集问题,实现了通过计算机串口对瞬变光谱信号的连续采集和实时的曲线绘制。本工作采用Savitzky-Golay平滑、傅里叶变换滤波和小波滤噪三种数据处理技术对采集数据进行平滑和滤波,并对其处理效果进行了比较。并以镉为例,验证了高效液相色谱与国产原子荧光光谱联用应用于形态分析的可能性。 相似文献