CO分子在Co(0001)表面吸附的第一性原理研究

应用第一性原理对CO分子在Co(0001)表面( squar3× squar3)R30°−CO吸附结构进行不同形式的密度泛函计算研究. 结果表明：吸附能修正前,仅RPBE泛函预测CO顶位吸附;而修正后PW91、PBE和PKZB泛函结果也表明CO分子Top顶位吸附最稳定,与实验结果一致.对于吸附几何结构、吸附前后体系功函、C-O伸缩振动频率和CO分子态密度分布,所有泛函给出一致的结果,且与已有实验结果符合.     

CO分子在Co(0001)表面吸附的第一性原理研究

应用第一性原理对CO分子在Co(0001)表面( squar3× squar3)R30°−CO吸附结构进行不同形式的密度泛函计算研究. 结果表明：吸附能修正前,仅RPBE泛函预测CO顶位吸附;而修正后PW91、PBE和PKZB泛函结果也表明CO分子Top顶位吸附最稳定,与实验结果一致.对于吸附几何结构、吸附前后体系功函、C-O伸缩振动频率和CO分子态密度分布,所有泛函给出一致的结果,且与已有实验结果符合.     

Density functional theory investigation of carbon monoxide adsorption on the kaolinite(001) surface

Carbon monoxide(CO) is a gaseous pollutant with adverse effects on human health and the environment. Kaolinite is a natural mineral resource that can be used for different applications, including that it can also be used for retention of pollutant gases. The adsorption behavior of carbon monoxide molecules on the(001) surface of kaolinite was studied systematically by using density-functional theory and supercell models for a range coverage from 0.11 to 1.0 monolayers(ML). The CO adsorbed on the three-fold hollow, two-fold bridge, and one-fold top sites of the kaolinite(001) was tilted with respect to the surface. The strongest adsorbed site of carbon monoxide on the kaolinite(001) surface is the hollow site followed by the bridge and top site. The adsorption energy of CO decreased when increasing the coverage, thus indicating the lower stability of surface adsorption due to the repulsion of neighboring CO molecules. In addition to the adsorption structures and energetics, the lattice relaxation, the electronic density of states, and the different charge distribution have been investigated for different surface coverages.     

A comparative first-principles study of the adsorption of a carbon atom on copper and nickel surfaces

The adsorption energies of a carbon atom at the most stable adsorption sites on the Cu and Ni(100), (110) and (111) surfaces have been studied by first-principles calculations. The preference order of the adsorption sites for both Cu and Ni surfaces is the same. The (100) hollow site is the most stable one. The diffusion barriers for a C atom on the three surfaces have also been obtained, with the highest mobility on the (111) surface of both metals. Our investigation shows that the adsorption energies of the C atom on Ni are significantly higher in magnitude than those on Cu for all the three surfaces. This phenomenon is mainly due to the interaction and hybridization between C p-orbits and partially filed d-shell of Ni, which forms a stronger binding.     

交换关联泛函近似方法对Ru催化剂上甲烷和乙烷形成的影响

密度泛函理论作为多相催化研究中的一个强有力工具,常被用于获得催化过程中关键的热力学及动力学参数,如吸附能、反应焓、活化能垒和速率常数等. 理解密度泛函交换关联近似方法对于揭示催化剂的催化性能及机理至关重要. 本文报道了六种不同的交换关联泛函近似方法,包括PBE、RPBE、BEEF+vdW、optB86b+vdW、SCAN和SCAN+rVV10,对金属Ru(0001)和Ru(1011)表面上甲烷和乙烷形成过程中涉及到的中间体的吸附能、反应能和活化能垒的影响. 当基元反应中反应物和产物与表面的配位数不同时,理论计算的反应能大小强烈依赖于交换关联密度泛函的选择. 对于涉及多个基元步骤的总反应,反应能的计算偏差会逐渐累积,从而导致不同的交换关联泛函近似方法之间的巨大差异. 由于不同泛函对反应涉及到的中间体吸附能之间存在差异,交换关联泛函近似方法的选择显著地影响Ru(0001)表面上甲烷、乙烯和乙烷的选择性. 然而,不同泛函近似方法对于Ru(0001) 和Ru(1011)表面上基元反应的能垒以及结构敏感性影响不大. 本工作不仅揭示了交换关联密度泛函近似方法在理论计算研究催化领域的局限性,也强调了选择合适的交换关联泛函方法对于正确评估催化剂活性和选择性的重要性.     

Migration of adatom adsorption on graphene using DFT calculation

DFT calculations of various atomic species on graphene sheet are investigated as prototypes for the formation of nano-structures on graphene. We investigate computationally the adsorption energies and migration energies in adsorption sites on graphene sheet for many atomic species, including transition metals, noble metals, nitrogen and oxygen, from atomic number 1 to 83, using the DFT calculation. The calculations are done for adatoms at three sites having symmetry, H6, B and T on a 3×3 super cell. For adsorption energy and migration energy, we performed a study that covered almost all the periodic table. The calculated results show that adsorption for metal and transition metal elements is mainly on the H6-site, whereas nonmetallic elements showed a tendency to adsorb on the B-site. When we consider a metal-graphene junction, not only the adsorption energy but also the migration energy is important. We estimate the minimum limit of the migration energy of the adatom. We found that 3d transition metals and some nonmetallic elements had very high migration energy. Our calculation will be very helpful for experimental groups that are considering the choice of electrode materials for metal-graphene junctions, and in designing nano devices, nano wires and nano switches.     

Comparison of S, Pt, and Hf adsorption on NiAl(1 1 0)

First-principles periodic slab density-functional theory (DFT) calculations with a plane-wave basis are used to predict the properties of S, Pt, and Hf adsorption on NiAl(1 1 0). Stable adsorption sites are identified, and adsorbate binding energies and structures are predicted. We find that while S adsorbs in a threefold site, the metals prefer to adsorb in the Ni-Ni twofold bridge site. The latter finding is consistent with scanning tunneling microscopy experiments for adsorption of various transition metals on NiAl(1 1 0) by Ho and coworkers. S is predicted to easily diffuse between threefold sites. We find that Pt and Hf both induce significant changes in the local surface structure, changing twofold bridge sites into fourfold coordination sites by drawing next-nearest-neighbor atoms nearly equidistant with the nearest-neighbor atoms. We find Pt favors interaction with Al slightly more than Ni, while Hf shows a particularly strong affinity for Ni compared to Al. We also predict that Hf may diffuse one-dimensionally along Ni rows with a barrier of ≈0.6 eV.     

缺陷对钠在石墨烯上吸附性能的影响

采用基于密度泛函理论的第一性原理方法,研究了本征石墨烯和缺陷石墨烯吸附钠原子的电荷密度、吸附能、态密度和储存量.结果表明,本征石墨烯中,钠原子的最佳吸附位置为H位,缺陷石墨烯中,钠原子的最佳吸附位置为T_D位.缺陷石墨烯对钠原子的吸附能是-4.423 eV,约为本征石墨烯对钠原子吸附能的2.5倍;钠原子与缺陷石墨烯中的碳原子发生轨道杂化,而与本征石墨烯没有发生轨道杂化现象.缺陷石墨烯能够吸附10个钠原子,与本征石墨烯相比显著提高.因此,缺陷石墨烯有望成为一种潜在的储钠材料.     

Atomic oxygen adsorption on Pb(1 0 0)

We study atomic oxygen adsorption on a Pb(1 0 0) surface using density functional theory. The structures, binding energies, work function, and charge transfer of on-surface and subsurface adsorption are investigated at a range of coverages from 0.06 to 1.00 ML. The energetically favored adsorption site for on-surface adsorption is found to be a distorted hollow site for the whole coverage range studied. The distorted structures are stabilized by mixing of 6s and 6p states of lead mediated by the 2p states of oxygen. For subsurface adsorption, the sub-bridge site is found to be preferred to the sub-hollow site at low coverages, the two being nearly equal in energy at monolayer coverage. At 0.11 ML coverage, diffusion from an on-surface hollow site to a sub-bridge site is found to be barrierless, suggesting facile subsurface oxidation at low coverages. Combined on-surface and subsurface adsorption leads to the formation of a two-layer oxide structure resembling β-PbO.     

石墨烯吸附钛原子的第一性原理研究

基于密度泛函理论研究了单个钛原子分别位于本征石墨烯GR、点缺陷石墨烯（包括空位石墨烯DGR和氮掺杂石墨烯N-GR）薄片表面的吸附机理。通过计算钛原子在本征石墨烯表面不同位置时的吸附结构和吸附能,发现最稳定吸附位置是碳六元环的中心;计算了各个吸附体系的吸附能、态密度和差分电荷密度,研究表明三个吸附体系碳钛间均产生了电子轨道杂化,掺氮后的石墨烯对钛原子的吸附性能略微增强,而空位石墨烯对钛的吸附能是本征石墨烯的4倍,费米能级附近电子态局域化程度最大,吸附效果最好。     

N-doped graphene as a nanostructure adsorbent for carbon monoxide: DFT calculations

ABSTRACT

This work reports the physisorption of carbon monoxide (CO) on the surface of N-doped graphene. To study the adsorption of CO on N-doped graphene, some quantum chemical calculations were used through density functional theory. Based on our results, it can be found that the CO molecule could be adsorbed on the surface of N-doped graphene physically with the adsorption energies (E_ads) of ?2.9 and ?0.8 kcal mol^?1 (depends on the kind of configuration) while positive adsorption energies were calculated upon adsorption of CO on pristine graphene. We used the charge analysis for calculation of the net transferred charge of adsorbed CO on pristine and N-doped graphene sheets to evaluate the sensing ability of surface. The global indices of reactivity were calculated from the differences of the lowest unoccupied molecular orbital and highest occupied molecular orbital energies. Graphs for density of states point to some orbital hybridisation between CO molecule and N-doped graphene. Consequently, the N-doped graphene transforms the existence of CO molecules into electrical signal, and it may be potentially used as a sensor for CO.     

First-principles study of palladium atom adsorption on the boron- or nitrogen-doped carbon nanotubes

We have performed first-principles calculation to investigate the adsorption of a single palladium atom on the surface of the pristine and boron- or nitrogen-doped carbon nanotubes (CNTs). The results show that for the adsorption of a single palladium atom on the pristine CNT surface, the most stable site is Bridge1 site above the axial carbon–carbon bond. Either boron- or nitrogen-doped CNTs can assist palladium surface adsorption, but the detailed mechanisms are different. The enhanced palladium adsorption on boron-doped CNT is attributed to the palladium d orbital strongly hybridized with both boron p orbital and carbon p orbital. The enhancement in palladium adsorption on nitrogen-doped CNT results from activating the nitrogen-neighboring carbon atoms due to the large electron affinity of nitrogen. Furthermore, the axial bond is preferred over the zigzag bond for a palladium atom adsorbed on the surface of all three types of CNTs. The most energetically favorable site for a palladium atom adsorbed on three types of CNTs is above the axial boron–carbon bond in boron-doped CNT. The enhancement in palladium adsorption is more significant for the boron-doped CNT than it is for nitrogen-doped CNT with a similar configuration. So we conclude that accordingly, the preferred adsorption site is determined by the competition between the electron affinity of doped and adsorbed atoms and preferred degree of the axial bond over the zigzag bond.     

Density functional study of initial HfCl4 adsorption and decomposition reactions on silicon surfaces with SiON interfacial layer

The initial adsorption and decomposition of HfCl₄ on silicon surfaces with different types of SiON interfacial layers are investigated using density functional theory. We find that the reactions of HfCl₄ on both the hydroxylated and nitrided silicon surfaces proceed through similar reaction pathways. By comparison of the reaction energies of HfCl₄ with the hydroxyl and amino surface sites, we find that it is both kinetically and thermodynamically favorable for the reactions of HfCl₄ on hydroxyl site of silicon substrates. Comparing with the adjacent bridging oxygen, we also find that the neighboring hydroxyl can facilitate the adsorption of HfCl₄ on the amido surface site. Also, it is more kinetically and thermodynamically favorable for the reaction of HfCl₄ with bridging NH site than that with NH₂ site.     

钠在空位石墨烯上吸附性能的研究

采用基于密度泛函理论的第一性原理方法,研究了本征石墨烯和空位石墨烯吸附钠原子的电荷密度、吸附能、态密度和储存量.结果表明,在两种石墨烯中,钠原子的最佳吸附位置都为H位.空位石墨烯对钠原子的吸附能是-2. 46 eV,约为本征石墨烯对钠原子吸附能的3. 4倍;钠原子与空位石墨烯中的碳原子发生轨道杂化,而与本征石墨烯没发生轨道杂化现象.存在一个空位的石墨烯能够吸附5个钠原子,与本征石墨烯相比显著提高.因此,空位石墨烯有望成为一种潜在的储钠材料.     

A DFT study for adsorption of CO on Ni,Pd and Pt atoms doped (7, 0) boron nitride nanotube

By using density functional theory calculations, we investigated the structural, electronic and magnetic properties of carbon monoxide (CO) adsorption on the pure, Ni, Pd and Pt doped atoms in zigzag single-walled (7, 0) boron nitride nanotubes (BNNTs). The results indicated that compared to the pure (7, 0) BNNTs, replacing B atom by Ni, Pd and Pt atoms can significantly increase the adsorption energy of CO gas on the BNNTs. The adsorption energies of CO gas on the pure (7, 0) Ni, Pd and Pt doped (7, 0) BNNTs are ?0.2013, ?1.746, ?1.593 and ?2.257 eV, respectively. Our results revealed that in comparison with the pure (7, 0) BNNTs, CO gas is chemisorbed on the transition metal doped (7, 0) BNNTs with the appreciable adsorption energy. In addition, it was found that by doping these atoms, band gap energy of the pure (7, 0) BNNTs is considerably decreased. These observations suggested that the Pt doped (7, 0) BNNTs can be introduced as a promising candidate in gas sensor devices for detecting CO gas.     

A density functional study of molecular oxygen adsorption and reaction barrier on Pu (100) surface

Oxygen molecule adsorptions on a Pu(100) surface have been studied in detail, using the generalized gradient approximation to density functional theory. Dissociative adsorption with a layer by layer alternate spin arrangement of the plutonium layer is found to be energetically more favorable compared to molecular adsorption. Hor2 approach on a bridge site without spin polarization was found to the highest chemisorbed site with an energy of 8.787 eV among all the cases studied. The second highest chemisorption energy of 8.236 eV, is the spin-polarized Hor2 or Ver approach at center site. Inclusion of spin polarization affects the chemisorption processes significantly, non-spin-polarized chemisorption energies being typically higher than the spin-polarized energies. We also find that the 5f electrons to be more localized in spin-polarized cases compared to the non-spin-polarized counterparts. The ionic part of O-Pu bonding plays a significant role, while the Pu 5f-O 2p hybridization was found to be rather week. Also, adsorptions of oxygen push the top of 5f band deeper away from the Fermi level, indicating further bonding by the 5f orbitals might be less probable. Except for the interstitial sites, the work functions increase due to adsorptions of oxygen.     

甲基和羟基在Ir(111)表面吸附的密度泛函理论研究

在超原胞近似和slab模型基础上,采用周期性密度泛函理论,在0.11覆盖度（ML）下,对甲基与羟基在Ir(111)表面的吸附进行了研究,得到了甲基和羟基在Ir(111)表面不同吸附位置的吸附能和吸附构型,计算了它们的振动频率,同时分析了甲基和羟基共吸附于Ir(111)表面的情况。结果表明,甲基和羟基在Ir(111)表面的最稳定吸附位置都是top位,甲基是碳端向下吸附,羟基是通过氧端向下倾斜吸附。通过频率分析发现吸附后CH3中C-H键的对称伸缩振动、反对称伸缩振动以及剪切振动频率均发生了红移,而羟基中的O-H键的振动频率发生蓝移现象。通过计算对比发现甲醇分解为甲基和羟基过程是一个放热反应,从热力学角度来说该反应是可行的。     

Structural, curvature and electronic properties of Rh adsorption on armchair single-walled carbon nanotube

This paper systematically studies the rolling effects of the (n, n) single-wall carbon nanotubes (SWCNT) with different curvatures on Rh adsorption behaviours by using density functional theory. The outside charge densities of SWCNTs are found to be higher than those inside, and the differences decrease with the increase of the tube radius. This electronic property led to the discovery that the outside adsorption energies are higher than the inside ones, and that the differences are reduced with the increase of the tube radius. Partial density of states and charge density difference indicate that these strong interactions induce electron transfer between Rh atoms and SWCNTs.     

Driving forces for the adsorption of cyclopentene on InP(001)

In this work the interaction of cyclopentene with a set of InP(001) surfaces is investigated by means of the density functional theory. We propose a simple approach for evaluating the surface strain and based on it we have found a linear relation between bond and strain energies and the adsorption energy. Our results also indicate that the higher the bond energy, the more disperse the charge distribution is around the adsorption site associated to the high occupied state, a key feature that characterizes the adsorption process. Different adsorption coverages are used to evaluate the proposed equation. Our results suggest that the proposed approach might be extended to other systems where the interaction of the semiconductor surface and the molecule is restricted to first neighbor sites.     

CO adsorption on MgO, CaO and SrO crystals periodic Hartree-Fock calculations

The adsorption of carbon monoxide at the defect-free (1 0 0), (1 1 0) and (2 1 0) five-atomic layer slab of the three oxides: MgO, CaO, and SrO has been investigated using the periodic Hartree-Fock level of ab initio theory, together with the 1 × 1 supercell model. All the calculated CO/oxide interaction energies exhibit exothermic character. The HF interaction energies increase monotonically in the order MgO < CaO < SrO. The surface morphology of adsorbate/substrate interaction is confirmed by considering relaxation energies, Mulliken population analysis, charge density contours, and electrostatic potential maps.