基质辅助激光解析电离-串联飞行时间质谱与电喷雾离子化-四极杆-飞行时间质谱分析蛋白质

为比较基质辅助激光解析电离-串联飞行时间质谱(MALDI-TOF-TOF)和电喷雾离子化-四极杆-飞行时间质谱(ESI-Q-TOF)在蛋白质定性和定量分析方面的性能,分别利用两种仪器对用于相对和绝对定量的等量异位标签(iTRAQ)标记的雌激素刺激前后MCF7细胞内的蛋白质水解产生的多肽进行了定性和定量分析.结果表明,用MALDI-TOF-TOF和ESI-Q-TOF方法分别鉴定出1086种和848种蛋白质,其中相同的蛋白质为633种;MALDI-TOF-TOF和ESI-Q-TOF方法分别找到38种和33种表达差异在0.5倍以上的蛋白质,其中3种为相同的蛋白质.实验数据说明,两种仪器在蛋白质定性和定量分析方面有很大的互补性,将两种仪器结合使用,不仅能够显著提高蛋白质定性和定量分析的覆盖率,而且可提高分析的置信度.     

串联飞行时间质谱鉴定急性脊髓损伤大鼠针刺后的差异蛋白质

针灸作为一种传统的康复治疗手段在治疗脊髓损伤方面已取得了较好疗效[1].本实验建立了急性脊髓损伤双向凝胶电泳图谱,初步观察了针刺治疗对急性脊髓损伤组织中蛋白质的变化与差异表达,用2种质谱技术鉴定了急性损伤相关差异蛋白质,对进一步从蛋白质组学角度研究脊髓损伤的病理机制和针刺治疗急性脊髓损伤的机理提供了重要参考数据.     

高效液相色谱-基质辅助激光解吸电离串联飞行时间质谱分离鉴定牛乳铁蛋白素

建立了高效液相色谱-基质辅助激光解吸电离串联飞行时间质谱(MALDI-TOF/TOF MS)分离鉴定牛乳铁蛋白素(bovine lactoferricin, LfcinB)的方法。采用胃蛋白酶酶解牛乳铁蛋白,酶解液离心后取上清液,经过离子交换色谱、反相液相色谱、透析等技术分离,对分离得到的目标产物进行抗菌活性分析、蛋白含量测定和MALDI-TOF/TOF MS鉴定。分离得到高活性的LfcinB,其相对分子质量为3124.89,蛋白含量为18.20 μg/mL。本方法具有精度高、分析速度快和分辨能力强等优点,是其他传统的分析鉴定LfcinB方法所无法比拟的,为进一步研究LfcinB奠定了基础。     

串联飞行时间质谱中亚胺离子的断裂特征及其在肽段鉴定中的作用

基质辅助激光解吸电离-串联飞行时间质谱(MALDI-TOF/TOF)产生的亚胺离子可以提供丰富的肽段组成信息,该方法通常用于基于数据库搜索的蛋白质鉴定,或者结合化学衍生法用于从头测序,因而在一定程度上限制了对亚胺离子的认识及应用。本研究利用239个串联质谱探索MALDI-TOF/TOF中亚胺离子的断裂特征以及它们在肽段鉴定中的应用,发现在高能碰撞诱导解离条件下组氨酸等14种氨基酸可产生较强的亚胺离子信号(>50%阳性率),氨基酸的化学结构、位置效应和氨基酸残基个数是影响碎片离子强度的主要因素。此外,探讨了亚胺离子应用过程中的假阳性问题,提出亚胺离子相对强度的比较可以降低假阳性和提高肽段鉴定确定度,有助于完善目前的数据库搜索算法和辅助从头测序分析。     

平面双核酰亚胺酞菁铁的激光解吸电离飞行时间质谱分析

应用激光解吸电离飞行时间质谱法（LDI—TOF—MS）对平面双核酰亚胺酞菁铁相对分子量进行了测定．探讨了3种不同基质对其分析结果的影响,结果发现基质并不能完全解离样品,而不加任何基质的激光质谱得到了理想的结果．     

基质辅助激光解析电离质谱用于多肽和蛋白质亚硝基化修饰研究

亚硝基阴离子是生物体内重要的生物调控小分子,广泛分布于生物体的血液和组织中,能使蛋白质发生硝基化和亚硝基化修饰,并且调控生物体的多种生理过程.本研究应用高灵敏度的基质辅助激光解析电离-飞行时间串联质谱(MALDI-TOF-MS)技术,以合成的标准肽段和肌红蛋白为模型系统.研究了蛋白质和多肽主链N端氨基与赖氨酸侧链氨基对HNO2反应的敏感性,并考察了反应体系和不同的反应时间对HNO2与多肽的反应完全程度的影响.结果表明,HNO2能与肽段N端的伯氨基发生重氮化反应,形成的叠氮化中间产物不稳定,放出氮气形成碳正离子,碳正离子可进一步发生取代或消除反应.发生取代反应,水溶液中的羟基取代N-末端氨基形成M+1产物,既使得产物比原肽段分子量多1 Da;发生消除反应,脱掉1分子的氨,又生成M-17烯烃衍生物,从而使产物比原肽段分子量少17 Da.当采用1 mol/L乙酸和1 mol/L的亚硝酸钠作为反应体系时,反应5 min, 肽段的N端氨基即可完全与HNO2反应生成羟基取代产物和烯烃衍生物.而在上述条件下,未发现赖氨酸侧链氨基与HNO2反应,说明HNO2主要与肽段和蛋白的N端氨基发生反应.     

气相色谱-四极杆飞行时间串联质谱的使用与维护保养

高分辨气相色谱-四极杆飞行时间串联质谱（GC-QTOF）可以在单飞行时间质谱（TOF）采集模式下,利用采集到的精确质量数离子对未知物进行分析和结构鉴定.GC-QTOF主要利用低分辨的美国国家标准与技术研究院质谱库（NIST）和高分辨的个人自建库（PCDL）进行搜索匹配,也能利用QTOF的碎片离子来倒推未知化合物,其主要利用分子结构推导软件（MSC软件）和Chemspiders（web）等数据库来搜索匹配.在做好仪器操作使用的同时也要经常性对仪器进行维护保养,确保仪器处于良好的使用状态,保证检测数据的准确、有效.主要介绍了安捷伦GC-QTOF的使用与维护保养.     

谷氨酸甲基化修饰的基质辅助激光解吸电离-串联飞行时间质谱分析

利用基质辅助激光解吸电离-串联飞行时间质谱(MALDI-TOF/TOF)高置信度地鉴定了枯草芽孢杆菌中的蛋白酶抑制剂和杆菌肽F两种蛋白及其翻译后修饰,发现在这两种蛋白质中共有5个肽段发生谷氨酸甲基化,其中肽段FELVVYDSEHK存在FE(Methylation)LVVYDSEHK和FELVVYDSE(Methylation)HK两种形式。结果表明,MALDI-TOF/TOF高能CID所提供的丰富断裂信息和全质量范围扫描对提高分析结果的确定性具有重要作用。此外,这5个甲基化肽段都可以检测到相对含量更高的非甲基化肽段,这为降低分析结果的假阳性提供了辅助判据。在低质量区检测到甲基化赖氨酸的亚胺相关离子m/z 98和143,说明发生了赖氨酸的甲基化;检测到m/z 116则提示发生了谷氨酸甲基化。     

基质辅助激光解析电离飞行时间质谱分析合成聚合物样品制备的研究进展

基质辅助激光解析电离飞行时间质谱（MALDI-TOF-MS）在合成聚合物的表征手段中具有不可替代的优点,可以提供聚合物的质量分布、嵌段长度、端基等信息.但由于合成聚合物的离子化效率通常不佳,因此样品制备是分析成功的关键.从基质、基质添加剂以及混样方式3个方面综述了MALDI-TOF质谱分析合成聚合物样品制备的研究进展.     

Ⅱ型糖尿病大鼠神经视网膜组织中差异蛋白质分析

以高脂饮食联合小剂量链脲菌素(Streptozotocin, STZ ) 注射方法诱导大鼠II型糖尿病 (T2DM) 模型为研究对象, 采用比较蛋白质组学技术鉴定和分析早期糖尿病神经视网膜差异表达蛋白.通过联用液氮内研磨、冰浴超声、高速离心提取全蛋白技术,提取每只大鼠神经视网膜全蛋白质总量约900 μg.采用双向凝胶电泳(2-DE) 分离技术,获得2500个以上可辩认的蛋白质斑点.通过蛋白质组学比对技术筛选出糖尿病状态下神经视网膜差异表达蛋白,用基质辅助激光解吸电离飞行时间串联质谱 (MALDI-TOF- MS/MS) 和肽质量指纹图谱 (PMF) 鉴定出20个差异蛋白点.按照Gene Ontology (GO)分类体系,对差异蛋白归类分析,揭示其亚细胞定位和分子功能.应用Pathway Studio软件对差异表达蛋白的生物学意义进行分析,认为凋亡是早期糖尿病视网膜病变(Diabetic retinopathy,DR) 重要的细胞事件;AnnexinΙ、CRYAB、mtHsp70蛋白是与病理过程相关的关键蛋白,对研究DR致病机制有重要意义.     

Identification of Proteins Using Affinity Affi-Gel Simultaneously with Acrylamide Electrophoresis

Abstract

This work presents a method in which a desired protein may be separated from a biological protein preparation and identified by highly specific monoclonal antibody. The desired protein may be isolated from crude protein preparations by this method. The protein remains intact and stable throughout the procedure. This method utilizes common nonreducing conditions of polyacrylamide gel electrophoresis (PAGE), and Western Blot transfer of protein. This isolation of the desired protein can be accomplished for a microgram or tens of micrograms of material. The application of Western blot technique with monoclonal antibody permits the highest specificity in terms of identifying the target protein. In addition to identifying the target protein the method can isolate sufficient amounts for further characterization.     

毛细管等电聚焦-毛细管区带电泳二维蛋白质分离平台的构建及其性能

通常采用二维聚丙烯酰胺凝胶电泳 ( 2 D- PAGE)分析组织或细胞的全蛋白质 [1] ,但难与质谱 ( MS)直接联用 .用高效液相色谱 ( HPLC)和毛细管电泳 ( CE)分离分析蛋白质和多肽的一维分离模式的分辨率和峰容量有限 .多维柱联用技术比一维分离有更高的分辨率和峰容量 [2 ] ,便于和 MS直接联用 [3,4 ] ,易于实现自动化 .目前 ,有关 2 D- CE的报道相对较少 [5～ 7] ,我们初步实现了将 2 D- PAGE由平板转移到毛细管中[6 ,7] ,但凝胶柱的制作烦琐 ,存在交叉污染 ,不能与 MS直接联用 .本文用微透析中空纤维膜为接口构建了毛细管等电聚焦 ( …     

Phosphoproteome profile of human liver Chang's cell based on 2-DE with fluorescence staining and MALDI-TOF/TOF-MS

Because reversible protein phosphorylation is central to biological regulation, many methods have been developed for the systematic parallel analysis of the phosphorylation status of large sets of proteins. To directly survey the extent of protein phosphorylation and the distribution of phosphoproteins in biological systems, we used a phosphoprotein staining method, Pro-Q Diamond dye, for the high-throughput identification of phosphoproteins. The specificity of the method was validated with protein standards and subsequently applied to an analysis of total protein from human liver Chang's cells. Proteins were separated by 2-DE, then sequentially stained with Pro-Q Diamond and Coomassie Blue G-250. After image analysis, the proteins in gel spots containing phosphoproteins were identified by MALDI-TOF/TOF-MS. A total of 269 phosphoproteins were identified, and 27 were known phosphoproteins in the SwissProt database. By comparing the relative volumes of the phosphoprotein map and the total protein map, the extent of protein phosphorylation was observed. The phosphoprotein staining method combined with 2-DE also detected polymorphisms of the phosphoproteins, and could distinguish highly abundant, but slightly phosphorylated proteins from less abundant, highly phosphorylated ones. We conclude that the phosphoprotein staining method can be used for global, quantitative phosphorylation detection.     

Detection and Identification of VOCs Using Differential Ion Mobility Spectrometry (DMS)

The article presents a technique of differential ion mobility spectrometry (DMS) applicable to the detection and identification of volatile organic compounds (VOCs) from such categories as n-alkanes, alcohols, acetate esters, ketones, botulinum toxin, BTX, and fluoro- and chloro-organic compounds. A possibility of mixture identification using only the DMS spectrometer is analyzed, and several examples are published for the first time. An analysis of different compounds and their mechanisms of fragmentation, influence on effective ion temperature, and high electric field intensity is discussed.     

Proteomic Analysis of Plasma Proteins in Diabetic Rats by 2D Electrophoresis and MALDI-TOF-MS

Despite tremendous advances in our understanding of the molecular basis of diabetes mellitus, substantial gaps still remain in our understanding of disease pathogenesis and in the development of effective strategies for early diagnosis and treatment. The proteomic approach has offered many opportunities and challenges in identifying new marker proteins and therapeutic targets, i.e., using 2D-polyacrylamide gel electrophoresis and matrix-assisted laser desorption/ionisation-time of flight mass spectrometry. The differential protein expressions were analyzed in alloxan-induced diabetic rats treated with Cynodon dactylon leaf extract. The plant extract was administered for 15 days that resulted in a significant increase in plasma insulin and C-peptide levels. We have also identified four differentially expressed proteins from rat plasma. These four diabetes-associated proteins were broadly classified into three groups as per their function: (1) lipid metabolism-associated protein (Apo A-IV), (2) antioxidant activity-related proteins [preprohaptoglobin and heat shock proteins B8 (HspB8)], and (3) muscle function-related protein (TPM3). Apo A-IV, HspB8, and preprohaptoglobin may play a key role in the recovery of diabetes mellitus and also prevent the diabetes-associated complications such as prevention of oxidative stress due to free radical and free hemoglobin. These results show the value of proteomic approach in identifying the potential markers that may eventually serve as diagnostic markers or therapeutic targets.     

Evaluation of Traumatic Spinal Cord Injury in a Rat Model Using 99mTc-GA-5 as a Potential In Vivo Tracer

Spinal cord injury (SCI) refers to the damage suffered in the spinal cord by any trauma or pathology. The purpose of this work was to determine whether ^99mTc-GA-5, a radiotracer targeting Glial Fibrillary Acidic Protein (GFAP), can reveal in vivo the reactivation of astrocytes in a murine model with SCI. A method for the ^99mTc radiolabeling of the mouse anti-GFAP monoclonal antibody GA-5 was implemented. Radiochemical characterization was performed, and radioimmunohistochemistry assays were used to evaluate the integrity of ^99mTc-GA-5. MicroSPECT/CT was used for in vivo imaging to trace SCI in the rats. No alterations in the GA-5’s recognition/specificity ability were observed after the radiolabeling. The GA-5’s radiolabeling procedure implemented in this work offers a practical method to allow the in vivo following of this monoclonal antibody to evaluate its biodistribution and specificity for GFAP receptors using SPECT/CT molecular imaging.     

Extraction and Identification of Ginsenoside Re and Its Effects and Mechanism of Protecting Acute Renal Ischemia-reperfusion Injury in Rats

This paper studies the extraction and identification of ginsenoside Re from ginseng fruits and investigates the effect and mechanism of ginsenoside Re of protecting acute renal ischemia-reperfusion injury in rats.Having been smashed,the ginseng fruits were ultrasonically extracted twice with 95% ethanol for 30min each.Having been concentrated,the solution was dissolved with distilled water and separated by two-column chromatography,of which one was packed with macroporous resin D4020,and the other was packe...     

碱性蛋白质毛细管电泳分离研究

碱性蛋白质毛细管电泳分离研究任吉存，邓延倬，程介克（武汉大学化学系分析测试科学系，武汉，４３００７２）关键词毛细管电泳，碱性蛋白质，吸附，精氨酸，赖氨酸蛋白质的吸附作用严重影响了毛细管电泳分离蛋白质的重现性［１］．为此，人们寻找各种途径来克服蛋白质的...     

前、后路手术治疗颈脊髓损伤的效果比较

目的比较前、后路手术治疗颈脊髓损伤的临床效果。方法选取78例颈脊髓损伤患者,抽签随机分为两组,其中39例采用前路手术治疗患者记为前路术组,另外39例采用后路手术治疗记为后路术组,观察两组手术相关指标并结合术后有效随访比较治疗综合效果。结果前路术组手术时间(75.4±10.2)min、术中出血量(206.3±31.5)m L较后路术组明显较低,术后1年颈椎功能JOA评分(14.4±1.8)分较后路术组显著较高(P0.05);前路术组不良结果发生率5.13%较后路术组低(P0.05)。结论同后路手术相比,前路手术具有手术时间短、术中出血量少的特点,且能有效减少术后不良结果的发生,对病情康复和改善预后具有重要意义。