Crystal structure of <Emphasis Type="Italic">L</Emphasis>-alanine phosphate

The crystal structure of L-alanine phosphate (C₃O₂NH₇ · H₃PO₄) is determined by the single-crystal diffraction technique; a = 11.918(1) Å, b = 9.117(1) Å, c = 7.285(1) Å, γ = 104.7(1)°, space group P2₁, and Z = 4. The amino group of the alanine is protonated by the hydrogen atom of the phosphoric acid. Pairs of H₂PO ₄ ^? hydrogen-bonded ions are packed into layers alternating with layers of alanine molecules in the crystal. No hydrogen bonds are formed immediately between the alanine molecules.     

Crystal structure of <Emphasis Type="Italic">p</Emphasis>-carboxyphenylhydrazone benzoylacetone

The crystal structure of p-carboxyphenylhydrazone benzoylacetone is determined. The crystals are monoclinic, a = 13.614(4) Å, b = 11.388(2) Å, c = 20.029(6) Å, β = 104.82(2)°, V = 2339(9) ų, Z = 8, space group C2/c, and R = 0.038 for 1622 reflections with I > 2σ(I). The crystal is built of C₁₇H₁₄N₂O₄ neutral molecules that are linked by O-H?O hydrogen bonds between the carboxyl groups into centrosymmetric pseudodimers. The effect of carboxylation of the phenylhydrazone fragment and the position of the carboxyl group on the molecular packing in the crystal is determined. The N(1)-H(1N)?O(1) intramolecular hydrogen bond (N-H, 0.94 Å; H?O, 1.87 Å; N?O, 2.59 Å; and the N-H?O angle, 133°) is formed in the molecule.     

Synthesis and crystal structure of a two-dimensional silver(I)-hexamethylenetetramine coordination polymer (<Emphasis Type="Italic">hmt</Emphasis>)

A novel two-dimensional coordination polymer [Ag(μ₃-hexamethylenetetramine)(H₂O)](BF₄) was synthesized and characterized by X-ray crystallography. It crystallized in the orthorhombic space group Pnnm with a = 15.561(7) Å, b = 10.754(5) Å, c = 6.514(3) Å, and Z = 4. Each Ag center is four-coordinated in a slightly distorted tetrahedral geometry. The structure consists of 2D wavy layers of hexagonal units; these 2D layers are further connected to form a 3D network by O-H⋯F, C-H⋯F hydrogen bonds with counter anions BF ₄ ⁻ in the layers. From Kristallografiya, Vol. 50, No. 4, 2005, pp. 648–650. Original English Text Copyright ? 2005 by Kong, Zhang, Sun, Okamura, Ueyama. The text was submitted by the authors in English.     

Crystal structure of SrFe(<Emphasis Type="Italic">EDTA</Emphasis>)Cl · 5H<Subscript>2</Subscript>O

The crystal structure of the SrFe(Edta)Cl · 5H₂O (I) complex is determined. The crystals are monoclinic, a = 7.530(4) Å, b = 10.575(3) Å, c = 23.308(10) Å, β = 95.75(4)°, Z = 4, and space group P2₁/c. The structural units of I are infinite ribbons of the molecular type that are formed by tetranuclear fragments. A tetranuclear fragment involves the centrosymmetric positively charged dimer group [Sr(H₂O)₄Cl] ₂ ²⁺ at the center and the [Fe(Edta)(H₂O)]_? anionic complexes, which compensate for the positive charge of the dimer group, at the periphery. These constituents are bound via bridging oxygen atoms of the Edta ligands. The coordination number of the Sr atom is nine. The Sr-O bond lengths lie in the range between 2.552 and 2.766 Å, the Sr-Cl bond length is 3.216(3) Å, and the Sr?Sr distance is 4.371(1) Å. The parameters of the [Fe(Edta)(H₂O)]^? group are within the range of values observed in such complexes: Fe-O, 1.996–2.086(3) Å; Fe-O(w), 2.110(4) Å; and Fe-N, 2.289(4) and 2.327(4) Å. Separate ribbons are linked by hydrogen bonds involving all H₂O molecules and terminal oxygen atoms of the Edta ligand.     

Crystal structure of CoUO<Subscript>2</Subscript>(SO<Subscript>4</Subscript>)<Subscript>2</Subscript> · 5H<Subscript>2</Subscript>O at 293 K

Single crystals of cobalt uranyl sulfate are grown. The crystal structure is established by X-ray diffraction: the orthorhombic system, sp. gr. Pmc2₁, a = 6.452(2) Å, b = 8.295(2) Å, c = 11.288(3) Å, R₁ = 0.0303, wR₂ = 0.0735 for reflections with I > 2σ(I). The structure of CoUO₂(SO₄)₂ · 5H₂O consists of infinite two-dimensional uncharged [CoUO₂(SO₄)₂H₂O]_2∞ layers, which are linked to each other by hydrogen bonds.     

Synthesis and structure of a terephthalato-bridged nickel complex [Ni(tpt)(imi)<Subscript>3</Subscript>(H<Subscript>2</Subscript>O)]<Emphasis Type="Italic">n</Emphasis>

At room temperature, a new coordination polymer [Ni(tpt)(imi)₃(H₂O)]n was synthesized by the reaction of NiCl₂?6H₂O, terephthalic acid, and imidazole in aqueous solution. The structure was determined by X-ray crystallography. It crystallizes in monoclinicP2₁/n space group with the crystal cell parameters ofa = 9.8626(4) Å,b = 15.2498(3) Å, andc = 12.7681(3)Å, β = 90.309(2)^°,V = 1920.33(10) ų, andZ = 4. The crystal X-ray analysis shows that each nickel atom is coordinated by three imidazole ligands, two terephthalate ions, and one water molecule. Each terephthalate ion bridges two nickel atoms to form a zigzag chain. The chains are further linked together via hydrogen bonds to a three-dimensional network.     

Crystal structure of the (Mg,Fe)[UO<Subscript>2</Subscript>(P,As)O<Subscript>4</Subscript>]<Subscript>2</Subscript> · 10H<Subscript>2</Subscript>O solid solution—A novel mineral variety of saléeite

The crystal structure of a novel variety {[(Mg_0.81Fe_0.19)(H₂O)₆](H₂O)₄}{(UO₂)[(P_0.67As_0.33)O₄]}₂ of the mineral saléeite is determined using X-ray diffraction (Bruker Smart diffractometer, λMoK _α, graphite monochromator, 2θ_max = 56.62°, R = 0.0321 for 2317 reflections, T = 100 K). The main crystal data are as follows: a = 6.952(6) Å, b = 19.865(5) Å, c = 6.969(2) Å, β = 90.806(4)°, space group P12₁/n1, Z = 2, and ρ_calcd = 3.34 g/cm³. It is shown that the structure is formed by alternating (along the [010] direction) anionic layers, which are composed of uranium bipyramids and T(P,As) tetrahedra, and cation layers consisting of M(Mg,Fe) octahedra and water molecules, which are joined through a system of asymmetric hydrogen bonds. The hydrogen atoms are located, the scheme of hydrogen bonds is established, and their geometric characteristics are calculated.     

Crystal structure of the molecular complex of 3-[1-(4-nitrophenyl)-3-oxobutyl]-4-hydroxychromen-2-one with ethanol

The crystal structure of 2,3H-2-methyl-4-(4-nitrophenyl)-5-oxobenzopyrano[3,4-e]dihydropyran-2-ol is investigated using X-ray diffraction. The unit cell contains an ethanol molecule that forms hydrogen bonds with O-H and C-O groups of two molecules of the main compound and acts as a proton donor and a proton acceptor in these hydrogen bonds. Owing to these interactions, infinite chains are formed in the crystal. The crystallographic data for the structure of C₁₉H₁₅NO₆·C₂H₅OH (M = 399.39) are as follows: the crystals are triclinic, space group P1, a = 5.5340(3) Å, b = 8.0109(4) Å, c = 11.0112(5) Å, α = 88.773(2)°, β = 84.788(2)°, γ = 79.958(2)°, and Z = 1.     

Crystal structure of complex natural aluminum magnesium calcium iron oxide

The structure of a new natural oxide found near the Tashelga River (Eastern Siberia) was studied by X-ray diffraction. The pseudo-orthorhombic unit cell parameters are a = 5.6973(1) Å, b = 17.1823(4) Å, c = 23.5718(5) Å, β = 90°, sp. gr. Pc. The structure was refined to R = 0.0516 based on 4773 reflections with |F| > 7σ(F) taking into account the twin plane perpendicular to the z axis (the twin components are 0.47 and 0.53). The crystal-chemical formula (Z = 4) is Ca₂Mg ₂ ^IV Fe ₂ ^(2+)IV [Al ₁₄ ^VI O₃₁(OH)][Al ₂ ^IV O][Al^IV]AL^IV(OH)], where the Roman numerals designate the coordination of the atoms. The structure of the mineral is based on wide ribbons of edge-sharing Al octahedra (an integral part of the spinel layer). The ribbons run along the shortest x axis and are inclined to the y and z axes. The adjacent ribbons are shifted with respect to each other along the y axis, resulting in the formation of step-like layers in which the two-ribbon thickness alternates with the three-ribbon thickness. Additional Al octahedra and Mg and Fe²⁺ tetrahedra are located between the ribbons. The layers are linked together to form a three-dimensional framework by Al tetrahedra, Ca polyhedra, and hydrogen bonds with the participation of OH groups.     

Crystal structures of complexes of the <Emphasis Type="Italic">cys-syn-cys</Emphasis> isomer of dicyclohexano-18-crown-6 with oxonium hexafluorotantalate and oxonium hexafluoroniobate

The crystal structures of [(cys-syn-cys-dicyclohexano-18-crown-6 · H₃O)][TaF₆] and [(cys-syn-cys-dicyclohexano-18-crown-6 · H₃O)][NbF₆] complex compounds are determined using X-ray diffraction analysis. The tantalum complex has two polymorphic modifications, namely, the monoclinic (I) and triclinic (II) modifications. The unit cell parameters of these compounds are as follows: a = 8.507(4) Å, b = 11.947(5) Å, c = 27.392(12) Å, β = 93.11(1)°, Z = 4, and space group P2₁/n for modification I; and a = 10.828(1) Å, b = 11.204(1) Å, c = 12.378(1) Å, α = 72.12(1)°, β = 79.40(1)°, γ = 73.70(1)°, Z = 2, and space group P-1 for modification II. The triclinic niobium complex [(cys-syn-cys-dicyclohexano-18-crown-6 · H₃O)][NbF₆] (III) with the unit cell parameters a = 10.796(3) Å, b = 11.183(3) Å, c = 12.352(3) Å, α = 72.364(5)°, β = 79.577(5)°, γ = 73.773(4)°, Z = 2, and space group P-1 is isostructural with tantalum complex II. The structures of all three complexes are ionic in character. The oxonium cation in complexes I–III is encapsulated by the crown ether and thus forms one ordinary and two bifurcated hydrogen bonds with the oxygen atoms of the crown ether. This macrocyclic cation is bound to the anions through the C-H...F contacts (H...F, 2.48–2.58 Å). The conformation of the macrocycle in complex I differs substantially from that in complex II (III).     

Synthesis,Crystal Structure,and Free Radical Scavenging Activity of 4-Aminopyridinium 3,5-Dinitrobenzoate

The crystal structure of 4-aminopyridinium 3,5-dinitrobenzoate, C₁₂H₁₀O₆N₄, has been determined by single-crystal X-ray diffraction technique. The title compound crystallizes in the monoclinic sp. gr. P21/n with the unit cell parameters: a = 7.4726(3) Å, b = 23.0898(9) Å, c = 8.0744(4) Å, V = 1338.64(10) ų, Z = 4. The asymmetric unit of the compound consists of one 3,5-dinitrobenzoate anion and 4-aminopyridine cation. The adjacent anions and cations are linked through two N?H···O hydrogen bonds, N2?H2A···O5 and N₂?H2B···O6, to form an infinite chain of anions and cations, extended along the [010] direction.     

X-ray mapping in heterocyclic design: XV. Tricyclic heterocycles based on 2-oxo-2,5,6,7-tetrahydro-1<Emphasis Type="Italic">H</Emphasis>-cyclopenta[<Emphasis Type="Italic">b</Emphasis>]pyridine-3-carbonitrile

The structures of five compounds are studied using single-crystal X-ray diffraction: 2-oxo-2,5,6,7-tetrahydro-1H-cyclopenta[b]pyridine-3-carbonitrile [a = 15.641(8) Å, b = 9.373(5) Å, c = 7.387(4) Å, β = 92.91(5)°, Z = 4, space group P2₁/c]; 1-[2-(4-chlorophenyl)-2-oxoethyl]-2-oxo-2,5,6,7-tetrahydro-1H-cyclopenta[b]pyridine-3-carbonitrile [a = 4.728(4) Å, b = 28.035(11) Å, c = 11.184(3) Å, Z = 4, space group P2₁2₁2₁]; 2-[2-(4-chlorophenyl)-2-oxoethoxy]-6,7-dihydro-5H-cyclopenta[b]pyridine-3-carbonitrile [a = 10.1202(13) Å, b = 11.2484(18) Å, c = 13.4323(19) Å, β = 102.05(1)°, Z = 4, space group P2₁/c]; 2-(4-chlorophenyl)-3a, 6,7,8-tetrahydrocyclopenta[e][1.3]oxazolo[3.2-a]pyridine-4-carboxamide perchlorate [a = 7.702(2) Å, b = 9.599(3) Å, c = 23.798(5) Å, β = 93.44(2)°, Z = 4, space group P2₁/c]; and (3-amino-6,7-dihydro-5H-cyclopenta[b]furo[3.2-e]pyridin-2-yl)(4-chlorophenyl)methanone [a = 7.3273(2) Å, b = 13.390(3) Å, c = 28.792(8) Å, Z = 8, space group Pbca]. The structures are solved using direct methods and refined by the full-matrix least-squares procedure in the anisotropic approximation to R = 0.0580, 0.0724, 0.0469, 0.0477, and 0.0418, respectively.     

Crystal structure of the new radical cation salt (<Emphasis Type="Italic">DOET</Emphasis>)<Subscript>4</Subscript>[Fe(CN)<Subscript>5</Subscript>NO]<Subscript>1.25</Subscript>(C<Subscript>6</Subscript>H<Subscript>5</Subscript>Cl)<Subscript>0.75</Subscript>

A new radical cation salt based on 4,5-(1,4-dioxanediyl-2,3-dithio)-4′,5′-ethylenedithiotetrathiafulvalene (DOET) with the photochromic anion [Fe(CN)₅NO]^2?, namely, (DOET)₄[Fe(CN)₅ NO]_1.25(C₆H₅Cl)_0.75, is synthesized. Single crystals of this salt are studied using X-ray diffraction [a = 10.398(2) Å, b = 11.168(2) Å, c = 18.499(4) Å, α = 103.14(3)°, β = 92.80(3)°, γ = 106.02(3)°, V = 1996.3(7) ų, space group \(P\bar 1\), and Z = 1]. In the structure, radical cation layers alternate with anion layers along the c axis. The centrosymmetric dimers are formed by DOET radical cations in the donor layer with packing of the β type. Like the vast majority of DOET-based salts, the new salt possesses semiconductor properties.     

Unclassical hydrogen bonds of C—H⋅<Emphasis Type="Italic">s</Emphasis>O and C—H⋅<Emphasis Type="Italic">s</Emphasis>N in the crystals of 2-amino-3-cyano-4-(3,4-dichlorophenyl)-5-oxo-1,4,5,6-tetrahydro-4H-pyrano[2,3-<Emphasis Type="Italic">d</Emphasis>]pyrimidine

The 2-amino-3-cyano-4-(3,4-dichlorophenyl)-5-oxo-1,4,5,6-tetrahydro-4H-pyrano[2,3-d] pyrimidine (1, C₁₇H₁₅Cl₂N₅O₃) was synthesized and characterized by IR,¹H NMR and elemental analysis. The molecular structure of1 was further studied by using X-ray crystallography. The crystals of compound1 are triclinic, space groupP-1,a = 6.0090(4) Å,b = 10.4056(7) Å,c = 15.6021(11) Å, α = 70.983(4), β = 84.056(6), γ = 84.611(6),Z = 2,V = 915.47(11) ų. Two types of unclassical hydrogen bonds C–H?sO and C–H?sN were presented in the crystals. In addition, there were classical hydrogen bonds in the crystal structure.     

The crystal structure of vyuntspakhite: A redetermination

The crystal structure of the mineral vyuntspakhite (Y, TR)₆{Al₂(OH)₃[H_1.48Si_1.88O₇][SiO₄][SiO₃(OH)]}₂(a = 5.7551(11) Å, b = 14.752(3) Å, c = 15.906(4) Å, β = 96.046(4)°, sp. gr. P2₁/n, Z = 2), which had been established earlier in the pseudo-unit cell, is redetermined by X-ray diffraction (R = 0.040, T = 100 K). The redetermination of the structure shows that pronounced pseudotranslation along the axis c′ = c/3 is associated with the fact that Y(TR) atoms are related by a 1/3 translation along the [001] direction. Most of the hydrogen atoms are located. The crystal-chemical function of hydrogen bonds is analyzed. In the unit cell of vyuntspakhite, the cationic layers consisting of edge-sharing (Y,TR) eight-vertex polyhedra alternate along the b axis with mixed anionic layers composed of isolated Si tetrahedra (orthotetrahedra), Si₂O₇ double-tetrahedra (diortho) groups, Al five-vertex polyhedra, and Al₂O₈ double-tetrahedra groups linked by shared vertices and through hydrogen bonding.     

3,4,5-Triethoxybenzoic acid benzene solvate: An example of hydrogen-bonded carboxylic acid dimer

Crystals of 3,4,5-triethoxybenzoic acid benzene solvate, 3,4,5-(C₂H₅O)₃C₆H₂COOH? 0.25C₆H₆, are monoclinic, space group P2/c, with the cell dimensions at 100 K: a = 18.729(3), b = 10.6475(17), c = 14.390(2) Å, β = 98.410(2)^°, V = 2838.7(8) ų, and Z = 8, Z′ = 2. In the crystal structure two symmetrically independent molecules of 3,4,5-triethoxybenzoic acid form a planar dimer by two O–H?sO hydrogen bonds.     

Specific features of the crystal structure of erbium polyphosphate of the structural type <Emphasis Type="Italic">C</Emphasis>

Erbium polyphosphate Er(PO₃)₃ is synthesized at a temperature of 270°C from a polyphosphoric acid melt containing cerium, erbium, and phosphorus in the atomic ratio Cs: Er: P = 5: 1: 15. The crystal structure of the Er(PO₃)₃ polyphosphate synthesized is determined. The framework structure of the Er(PO₃)₃ polyphosphate is built up of infinite polyphosphate chains and ErO₆ octahedra bonded to these chains. The structure is a derivative of the structural type C, in which a large number of trivalent metal polyphosphates crystallize. The main distinguishing feature of this structural type is an increase in the parameter b of the monoclinic unit cell of the Er(PO₃)₃ compound by a factor of 11 (a = 10.040 Å, b = 73.482 Å, c = 11.268 Å, β = 97.28°, space group Ia).     

Hydrogen Bonding Network Assembled with 2-Amino-3-hydroxypyridium and Isonicotinate-N-oxide

The crystal structure of the compound (C₅H₇N₂O)·(C₆H₄NO₃)·H₂O (1) consisting of 2-amino-3-hydroxypyridium, isoniconate-N-oxide and lattice water was characterized by single-crystal X-ray diffraction analysis: monoclinic, P2₁/c, a = 9.6905(8), b = 6.0040(4), c = 21.039(2) Å, β = 101.062(8)°, V = 1201.34(18) Å³, Z = 4. In 1, the deprotonated isoniconate-N-oxide, the protonated 2-amino-3-hydroxypyridium and the lattice water are linked by a series of classical hydrogen bonds to form 2-D layer. Then, these 2-D sheets assemble to a 3-D network via weak hydrogen bonds.     

Crystal structure of hydrogen-bearing vuonnemite from the Lovozero alkaline massif

Hydrogen-bearing vuonnemite from the Shkatulka hyperagpaitic pegmatite (the Lovozero alkaline massif, Kola Peninsula) was studied by single-crystal X-ray diffraction. The triclinic unit-cell parameters are as follows: a = 5.4712(1) Å, b = 7.1626(1) Å, c = 14.3702(3) Å, α = 92.623(2)°, β = 95.135(1)°, γ = 90.440(1)°, sp. gr. P1, R = 3.4%. The Na⁺ cations and H₂O molecules are ordered in sites between the packets. The water molecules are hydrogen bonded to the PO₄ tetrahedra.     

Crystal structure of the supramolecular system of indole-2,3-dione 1-(2-oxopropyl)-3-ethylene ketal and its thiosemicarbazone

The crystal structure of a supramolecular system consisting of indole-2,3-dione 1-(2-oxopropyl)-3-ethylene ketal (I) and indole-2,3-dione 1-(2-oxopropyl)-3-ethylene ketal thiosemicarbazone (II) molecules that are linked together by hydrogen bonds is determined using X-ray diffraction. The crystal is monoclinic, and the unit cell parameters are as follows: a = 12.8360(3) Å, b = 10.7330(3) Å, c = 19.4610(3) Å, β = 99.566(1)°, space group P2₁/c, and Z = 4 (C₂₇H₂₉N₅O₇S). In molecules I and II, the indole-2,3-dione 3-ethylene ketal fragments have a virtually identical structure. The pyrrole and dioxolane fragments are spiro-linked through the carbon atom with a dihedral angle close to 90°. The adjacent pyrrole and benzene rings are coplanar to within 4.4°. In molecule II, the oxygen atom of the dioxolane fragment and the terminal nitrogen atom of the thiosemicarbazide fragment are involved in the N-HïO intramolecular hydrogen bond [3.294(2) Å]. The key role in the formation of the crystal structure is played by intermolecular hydrogen bonds of the N-H?dO, C-H?O, C-H?N, and N-H?S types.