Synthesis and properties of nucleic acid analogues consisting of a benzene-phosphate backbone

[Chemical reaction: See text] The synthesis and properties of a nucleic acid analogue consisting of a benzene-phosphate backbone are described. The building blocks of the nucleic acid analogue are composed of bis(hydroxymethyl)benzene residues connected to nucleobases via the biaryl-like axis. Stabilities of the duplexes were studied by thermal denaturation. It was found that the thermal stabilities of the duplexes composed of the benzene-phosphate backbone are highly dependent on their sequences. The duplexes with the benzene-phosphate backbone comprised of the mixed sequences were thermally less stable than the natural DNA duplexes, whereas that composed of the homopyrimidine and homopurine sequences was thermally and thermodynamically more stable than the corresponding natural DNA duplex. It was suggested that the analogues more efficiently stabilize the duplexes in a B-form duplex rather than in an A-form duplex. Thus, the duplexes consisting of the benzene-phosphate backbone, especially composed of the homopyrimidine and homopurine sequences, may offer a novel structural motif useful for developing novel materials applicable in the fields of bio- and nanotechnologies.     

Synthesis and properties of a new AIE macrocyclic emitter with triarylamine backbone

A new macrocyclic AIE emitter composed of triarylamine backbone was successfully synthesized through convenient homocoupling procedure and easily purified by silica gel column chromatography, and recrystallization. The optical and electrochemical properties of the compound have been investigated. Intriguingly, the compound shows dual emission both 423 nm and 505 nm. This result implied that the violet emission was originated from an isolated component of the emitter, whereas the yellowish-green emission simultaneously exhibited AIE nature. The compound exhibits enough thermal stability and high glass transition temperature to be applied for organic devices.     

A family of macrocyclic antibiotics with a mixed peptide-peptoid beta-hairpin backbone conformation

Macrocyclic peptidomimetics having a mixed peptide-peptoid backbone have been synthesized and shown to possess antibiotic activity against gram-positive and -negative bacteria with a low hemolytic activity against human erythrocytes; one is shown to adopt a regular beta-hairpin conformation by NMR in aqueous solution.     

Diversity-oriented approach to macrocyclic cyclophane derivatives by Suzuki-Miyaura cross-coupling and olefin metathesis as key steps

Palladium-catalyzed Suzuki-Miyaura (SM) cross-coupling reaction with allylboronic acid pinacol ester and titanium assisted cross-metathesis (CM)/ring-closing metathesis (RCM) cascade has been used to synthesize macrocyclic cyclophane derivatives.     

Preparation and multivalently enhanced guest-binding affinity of water-soluble cyclophane heptadecamers

Water-soluble cyclophane heptadecamers (17a and 17b), which were constructed with the core cyclophane heptadecamer and 36 polar side chains with a terminal galactose or glucose residue, respectively, were prepared. An analogous cyclophane pentamer (5a) was also prepared. The stoichiometry for the complex of the cyclophane oligomers with fluorescence guests such as TNS was confirmed to be 1:1 host:guest by a Job plot. The guest-binding affinity of cyclophane heptadecamers 17a and 17b was much enhanced relative to that of a corresponding monocyclic cyclophane (1a), i.e., the 1:1 binding constant (K) values for 17a with TNS, 2,6-ANS, and 1,8-ANS were ca. 1700-, 1600-, and 1500-fold larger than those of 1a for the identical guests, respectively, which reflects the multivalency effects in macrocycles. Meanwhile, the corresponding K values for the cyclophane pentamer 5a with TNS, 2,6-ANS, and 1,8-ANS were ca. 250-, 250-, and 110-fold larger than those of 1a for the identical guest, respectively.     

Preparation of both enantiomers of a synthon for novel nucleoside analogs by enzymatic desymmetrization of a meso-diol with a methylene cyclopropane skeleton

The enzymatic desymmetrization of methylenecyclopropane diol or its corresponding diacetate derivative, generated from a [2+1] cycloaddition between dioxepin and methylchlorocarbene, is described. After screening five commercial lipases, the two enantiomers of acetic acid 2-hydroxymethyl-3-methylene-cyclopropylmethyl ester are obtained in high yields and excellent enantioselectivities by using PFL or LPP in organic solvent. The stereostructure of the desymmetrization products was established by X-ray analysis. We also reported a new example with this non racemic chiral building block where the sign of optical rotation is dramatically solvent dependent and inverted. Using these enantiopure building blocks, a synthesis of novel nucleoside analogs is also presented.     

Three 18-membered macrocyclic diamides with differing donor atoms and backbone substituents

Journal of Inclusion Phenomena and Macrocyclic Chemistry - The crystal structures are reported for 1,4,10,13-tetraoxa-7,16-diazacyclooctadecane-6,17-dione, (C12H22N2O6), (I),...     

Preparation and electrochemical behavior of a macrocyclic heterodinuclear FeIIICoIII complex

A new macrocyclic heterodinuclear Fe^IIICo^III complex, prepared by the condensation of 2,6-diformylpyridine N-oxide with 1,3-diaminopropane in the presence of FeCl₂.4H₂O and CoCl₂.6H₂O, and formulated as FeCoLCl₆.C₂H₅OH.8H₂O, was characterized by elemental analyses, IR and Mössbauer spectra and investigated electrochemically on an ultramicrodisk platinum electrode. The results show that the electrode reaction can be thought as a nearly reversible transfer process. The diffusion coefficient is 1.93×10^-6 m² s^-1 and E^o ̄ is −0.229V (versus s.c.e) and α=0.877. The average electron transfer rate constant k^o′ is 3.21×10^-3 cm s^-1.     

Synthesis and complexation of a novel cyclophane

A novel cyclophane, 17, 17, 40, 40-tetramethyl-7, 30-dinitro-1, 10, 24, 33-tetraoxa[2.2.1.2.2.1] metaparaparametaparaparacyclophane, was synthesized by 2:2 cyclization of 3,5-bis(bromomethyl)nitrobenzene, derived from 3,5-dimethylnitrobenzene, and bisphenol A. The cyclophane was found to form 1:1 complex with benzene.     

Synthesis of polymeric and macrocyclic Lewis acids: influence of backbone on degree of aggregation

A simple, one-step synthesis of multinuclear Lewis acids can be driven with high selectivity towards either macrocyclic or polymeric arrays by appropriate choice of backbone framework.     

Conformational dynamics of a bispyridinium cyclophane

A complete study of the conformational behavior of 4,8-diaza-3(1,4),9(4,1)-dipyridina-1,6(1,4)-dibenzenacyclodecaphan-3(1),9(1)-bis(ilium) bishexafluorophosphate is described. This study allows us to conclude that the process observed by which the different chemical shifts of the pyridinium protons show coalescence at a high-temperature 1H NMR is the rotation around the C-N bond, whereas the conformational equilibrium between the four conformers is produced at low temperature.     

Preparation of new reactive methylene monomers

Acryloylacetone, methacryloylacetone, and related monomers have been synthesized by using cyclopentadiene as a blocking agent during the Claisen condensation.     

Preparation of electrically conducting particles consisting of a polymer core and a metallic copper shell

Micron-sized composite particles consisting of spherical polymer cores and metallic copper shells were prepared. Basic cupric carbonate was coated on sulfonated polymer particles by pH-controlled hydrolysis of cupric nitrate. The thickness of the coating layer was controlled by the number of polymer particles. Addition of CO₂ during aging increased the shell thickness. Electrically conducting particles were obtained by reduction with hydrogen of the composite particles obtained. Received: 9 August 2000 Accepted: 17 July 2001     

Spectroscopic properties of cyclophane/anthracene and cyclophane/9-fluorenone complexes in dichloromethane

Host/guest interactions of cyclophane/anthracene (C/A) and cyclophane/9-fluorenone (C/F) complexes in dichloromethane, where the cyclophane molecule is the host, are investigated. The stability constants, log K_a, for the C/A and C/F complexes are determined by absorption and fluorescence spectroscopy. For the C/A system, log K_a is 4.2±0.2 as determined from absorption (at 325 nm) and emission (at 382, 403 and 427 nm) spectroscopic data. The analogous measurements yield 3.6±0.2 from absorption (at 309 nm) and emission (at 505 nm) spectroscopic data for the C/F system. Heats of formation of these complexes were determined by measuring the complex association constants at 25, 29 and 32 °C. These results reveal that binding of the anthracene guest by this cyclophane molecule is thermodynamically favored over that for a 9-fluorenone guest. Excited state lifetimes of these systems are also determined.     

Solid state structure and solution conformation of a macrobicyclic cyclophane

X-ray crystallographic structure determination of the macrobicyclic cyclophane L¹ reveals a compact structure involving close edge-to-face approach of aromatic rings; ¹H nmr shows that this is also the solution conformation.     

Emulsion intercalation of smectite clays with comb-branched copolymers consisting of multiple quaternary amine salts and a poly(styrene-butadiene-styrene) backbone

Layered silicates were intercalated with comb-branched copolymers consisting of a hydrophobic polystyrene-b-poly(ethylene/butylene)-b-polystyrene (SEBS) backbone and multiple pendants of poly(oxyalkylene) (POA) quaternary ammonium salts. The requisite intercalating agents were synthesized by grafting POA amines on the maleated SEBS. The corresponding SEBS-POA amine salts were found to have two functions, the capability to emulsify toluene/water mixtures to fine particle sizes of 60-70 nm in diameter and to exchange ions with sodium montmorillonite. The resulting silicate hybrids were characterized by X-ray diffraction and transmission electron microscopy. Two types of intercalations with silicate d spacing of 18 and 50 A were obtained, in which the dissimilarity is attributed to disparate polymer incorporations, POA pendants only or the combination of both the SEBS backbone and POA in the gallery. Furthermore, the two conformations of polymer-intercalated silicates are reversibly transformable by varying emulsion conditions, micelle sizes, and solvents.     

Preparation and structural properties of macrocyclic phosphonamides. Structural characterization of a potassium complex

A novel class of organophosphorus macrocycles containing one phosphonamide or one thiophosphonamide group was obtained by condensation of bis(dimethylamino)methyl-phosphine with the appropriate oligoether-bisprimary amine, followed by the oxidation of the P(III) species. The structures of two macrocyclic phosphonamide ligands (3 and4) which differ in the length of the oligoether chain, and that of the potassium thiocyanate complex of4, were studied by Xray diffraction. The crystals of3 and4 containe two crystallographically independent molecules. A cavity appears in the centre of each uncomplexed molecule, but the oxygen atoms of the longer oligoether chain are better oriented towards the centre of this cavity. An important rearrangement of the molecular conformation of4 occurs upon complexation as shown in the crystal structure analysis of the complex4· KSCN. The phosphoryl O atom of one molecule binds to the metal ion of another complexed molecule, leading to the self assembly of4· KSCN complexes. Supplementary Data relating to this article are deposited with the British Library as Supplementary Publication No. SUP. 82161 (27 pages).Research fellow (1986–1989), Université J. Fourier, Grenoble (France)