Ion-pair structure of vaporized ionic liquid studied by matrix-isolation FTIR spectroscopy with DFT calculations: a case of 1-ethyl-3-methylimidazolium trifluoromethanesulfonate

The matrix-isolation infrared spectrum of a thermally evaporated ionic liquid, 1-ethyl-3-methylimidazolium trifluoromethanesulfonate ([Emim][OTf]), was measured by FTIR spectroscopy and analyzed with the aid of DFT calculations. The main chemical species in the observed IR spectrum was mainly identified as the 1:1 cation-anion pair, which corresponds to the second stable ion-pair structure bonded through five hydrogen bonds between three O atoms of the anion side and four H atoms of the cation.     

Unusual photochemical C-N bond cleavage in the novel methyl 2-chloro-3-methyl-2H-azirine-2-carboxylate

The structure, preferred conformers, vibrational spectrum, and photochemical behavior of the novel azirine, methyl 2-chloro-3-methyl-2H-azirine-2-carboxylate (MCMAC) were investigated in low-temperature matrixes and in the neat solid amorphous state by infrared spectroscopy and quantum-chemical calculations. Two conformers of the compound were observed in argon, krypton, and xenon matrixes, in agreement with the DFT(B3LYP)/6-311++G(d,p) and MP2/6-311++G(d,p) theoretical calculations. Both conformers were found to exhibit the carboxylic ester group in the cis conformation, differing in the arrangement defined by the O=C-C-Cl dihedral angle (cis and trans, for Ct and Cc forms, respectively). The Ct conformer was found to be the most stable conformer in the gaseous phase as well as in both argon and krypton matrixes, whereas the more polar Cc conformer became the most stable form in the xenon matrix and in the neat solid amorphous phase. In situ broadband UV (lambda > 235 nm) excitation of matrix-isolated MCMAC led to azirine ring C-C and C-N bond cleavages, the latter process corresponding to the most efficient reaction channel. The photochemical cleavage of the C-N bond had never been previously observed in the case of aliphatic 2H-azirines. Two electron withdrawing substituents (methoxycarbonyl group and chlorine atom) are connected to the azirine ring in the novel MCMAC azirine. The simultaneous presence of these two groups accelerates intersystem crossing toward the triplet state where cleavage of the C-N bond takes place. The primary photoproducts resulting from the C-N and C-C ring-opening reactions were also found to undergo further photochemical decarbonylation or decarboxylation reactions.     

Conformational study of monomeric 2,3-butanediols by matrix-isolation infrared spectroscopy and DFT calculations

The FT-IR spectra of two diastereomers of 2,3-butanediol, (R,S) and (S,S), isolated in low-temperature argon and xenon matrixes were studied, allowing the identification of two different conformers for each compound. These conformers were characterized by a +/-gauche arrangement around the O-C-C-O dihedral angle, thus enabling the establishment of a very weak intramolecular hydrogen bond of the O...H-O type. No other forms of these compounds were identified in matrixes, despite the fact that these four conformers had calculated relative energies from 0 to 5.1 kJ mol(-1) and were expected to be thermally populated from 50 to 6% in the gaseous phase of each compound. The nonobservation of additional conformers was explained in terms of low barriers to intramolecular rotation, resulting in the conformational relaxation of the compounds during deposition of the matrixes. The barriers to internal rotation of the OH groups were computed to be less than 4 kJ mol(-1) and are easily overcome in matrixes within the family of conformers with the same heavy atom backbone. The barriers for intramolecular rearrangement of the O-C-C-O dihedral angle in both diastereomers were calculated to range from 20 to 30 kJ mol(-1). Interconversions between the latter conformers were not observed in matrixes, even after annealing up to 65 K. Energy calculations, barriers, and calculated infrared spectra were carried out at the DFT(B3LYP)/6-311++G theory. Additional MP2/6-311++G calculations of energies and vibrational frequencies were performed on the most relevant conformers. Finally, independent estimations of the hydrogen-bond enthalpy in the studied molecules were also obtained based on theoretical structural data and from vibrational frequencies (using well-established empirical correlations). The obtained values for -DeltaH for both diastereomers of 2,3-butanediol amount to ca. 6-8 kJ mol(-1).     

Photolysis of regioisomeric diazides of 1,2-diphenylacetylenes studies by matrix-isolation spectroscopy and DFT calculations

A series of diazides of 1,2-diphenylacetylenes was photolyzed in matrices at low temperature and transient photoproducts were characterized by using IR, UV/vis methods combined with ESR studies. Theoretical calculations were also used to understand the experimental findings. The introduction of phenylethynyl groups on phenyl azides has little effect on the photochemical pathway. Thus, upon photoexcitation, (phenylethynyl)phenyl azides afforded the corresponding triplet nitrene, which is in photoequilibrium with the corresponding azacycloheptatetraene. In marked contrast, azidophenylethynyl groups exhibited a dramatic effect not only on the photochemical pathway of phenyl azides but also on the electronic and molecular structure of the photoproducts. The patterns of the effect depended upon the relative position of azide groups in the diphenylacetylene unit. Whenever two azide groups were situated in a conjugating position with respect to each other, as in p,p'-, o,o'-, and p,o'-bis(azides), the azides always resulted in the formation of a quinoidal diimine diradical in which unpaired electrons were extensively delocalizedin the pi-conjugation. The situation changed rather dramatically when azide groups were introduced in the meta position. Thus, the formation of azacycloheptatetraene was noted in the photolysis of the m.m'-isomer. ESR studies indicated the generation of a quintet state that was shown to be a thermally populated state with a very small energy gap of ca. 100 cal mol(-1). The m,p'-isomer was shown to be an excellent precursor for the high-spin quintet dinitrene. The IR spectra of the photoproduct showed no bands ascribable to azacycloheptatetraene. The observed spectra were in good agreement with that calculated for the quintet state. Strong EPR signals assignable to the quintet state were observed, along with rather weak signals due to mononitrenes. Moreover, the quintet bis(nitrene) was rather photostable under these conditions.     

Structure and DFT calculations of 2-{[3-methyl-3-phenyl-cyclobutyl)-thiazol-2-yl]-hydrazonomethyl}-phenol

The title compound 2-{[3-Methyl-3-phenyl-cyclobutyl)-thiazol-2-yl]-hydrazonomethyl}-phenol (C₂₁H₂₁N₃S₁O₁) crystallizes in the P-1 triclinic space group with a = 5.8880(4) ?, b = 9.5618(5) ?, c = 17.0484(10) ?, α = 80.214(5)°, β = 80.532(5)°, γ = 80.116(5)°. In addition to molecular geometry and packing from X-ray experiment, we have also calculated the molecular geometry and vibrational frequencies of the title compound in the ground state using density functional theory DFT (B3LYP) with the 6–31G(d,p) basis set. Apart from this, the structure of the title compound is characterized by ¹H NMR, ¹³C NMR, IR and UV-vis. Spectra, and the experimental emission energies are compared with the HOMO-LUMO energy gaps calculated by the DFT method.     

Reactions of N, N-dichloroalkylamines with solid base as studied by FTIR combined with DFT calculations

Products of vacuum gas–solid reactions of N, N-dichloroalkylamines with KOH have been identified by FTIR spectroscopy and DFT calculations. It has been found that the reactions consist of elimination of two Cl atoms accompanied with migration of an H atom, a ring carbon or a methyl group from the -carbon to the N atom and unstable imines with a C=N double bond are formed.     

6-氯哒嗪-3-甲酸甲酯的合成

以乙酰丙酸乙酯为起始原料,经过环合、溴代、消除、重铬酸钾氧化、酯化、POCl3氯代6步反应合成6-氯哒嗪-3-甲酸甲酯,目标化合物总收率42%,本方法操作简单,成本低廉,分离纯化容易,收率高,为6-氯哒嗪-3-甲酸甲酯的规模化合成奠定了基础.     

Ultrafast structural dynamics of photochromic indolylfulgimides studied by vibrational spectroscopy and DFT calculations

The structural dynamics of the ring-opening reaction in a photochromic indolylfulgimide, a reversible, ultrafast photoswitch, is investigated by ultra-broadband time-resolved vibrational spectroscopy. The experimentally observed vibrational modes of the indolylfulgimide photoisomers C and E are assigned to normal modes with the help of DFT calculations. A complete evaluation of the observed vibrational dynamics including excited-state vibrational modes is used to characterize the reaction path and the cooling behavior of the photoswitch.     

Intramolecular hydrogen atom tunneling in 2-chlorobenzoic acid studied by low-temperature matrix-isolation infrared spectroscopy

Intramolecular hydrogen atom tunneling in 2-chlorobenzoic acid has been investigated by low-temperature matrix-isolation infrared spectroscopy with the aid of density functional theory calculation. Infrared spectra of two relatively stable syn isomers, SC and ST, were observed in argon and xenon matrixes. When the matrix samples were annealed after deposition, the isomerization from ST to SC occurred around the benzene-carboxyl bond. Two less stable anti isomers, AT, which has an OH...Cl intramolecular hydrogen bond, and AC, which has no OH...Cl bond, were produced from SC and ST upon UV irradiation. When the matrix samples were kept in the dark after UV irradiation, AT and AC changed to ST and SC, respectively, by spontaneous isomerization around the C-O axis in the carboxyl group. The rate constants of isomerization, AT --> ST, in a Xe matrix were estimated from the absorbance changes at various matrix temperatures. The rate constants showed a drastic decrease in deuteration of the hydrogen atom of the carboxyl group. The relationship between the rate constants and the matrix temperature did not follow the Arrhenius law. These findings lead to the conclusion that the isomerization of AT --> ST and AC --> SC in low-temperature rare-gas matrixes proceeds through intramolecular hydrogen atom tunneling.     

Electrochemical synthesis of 5,6-dihydroxy-2-methyl-1-benzofuran-3-carboxylate derivatives

Electrochemical oxidation of catechols (1a-c) has been studied in the presence of methyl acetoacetate (2a) and ethyl acetoacetate (2b) as nucleophiles in aqueous solution using cyclic voltammetry and controlled-potential coulometry. The results indicate that the quinones derived from catechols (1a-c) participate in Michael addition reactions with 2a and 2b to form the corresponding benzofuran derivatives (3a-f). The electrochemical synthesis of 3a-f has been successfully performed in an undivided cell in good yield and purity. The oxidation mechanism was deduced from voltammetric data and by coulometry at controlled potential. The products have been characterized after purification by IR, ¹H NMR, ¹³C NMR, MS, and single crystal X-ray diffraction.     

Dynamics of intramolecular hydrogen-atom migrations in 2-hydroxy-3-nitropyridine studied by low-temperature matrix-isolation infrared spectroscopy and density functional theory calculation

Intramolecular hydrogen-atom migrations in 2-hydroxy-3-nitropyridine have been investigated by low-temperature matrix-isolation infrared (IR) spectroscopy with the aid of density functional theory (DFT) calculation. An IR spectrum measured after deposition was assigned to an enol isomer, the conformation of which is anti in relation to OH versus N in the pyridine ring. When the matrix sample was exposed to UV and visible light (lambda>350 nm), an IR spectrum consistent with a keto product was observed. During the irradiation, an IR spectrum of a transient species, a photoreaction intermediate between anti-enol and keto, was observed, which was assigned to syn-enol. The bands of syn-enol disappeared completely when the irradiation was stopped, while those of the original isomer, anti-enol, reappeared. No reverse isomerization was observable in the corresponding deuterated species. This led to the conclusion that the isomerization from syn to anti occurs through hydrogen-atom tunneling. On the other hand, an aci-nitro form was produced by UV irradiation (lambda=365+/-10 nm) without visible light. The conformation around the aci-nitro group was determined to be cis-cis by comparison with the spectral patterns obtained by the DFT/B3LYP/6-31++G** calculation. The dynamics of the hydrogen-atom migrations between anti- and syn-enols, syn-enol and keto, and anti-enol and aci-nitro are discussed in terms of the potential surfaces obtained by the DFT calculation.     

Electronic structure of thiazides studied by 35Cl‐NQR spectroscopy and DFT calculations

NQR frequencies were determined for the ³⁵Cl isotope in a few benzodithiazine derivatives, chlorothiazide (CTZ), hydrochlorothiazide (HCTZ), althiazide (ATZ), trichloromethiazide (TCTZ), benzthiazide (BTZ) and furosemide (FSE), at liquid nitrogen and room temperatures. It was found that changes of the substituent at C‐3 are transferred through a system of coupled rings on to the chlorine atom at C‐6. The substituents occurring in thiazides can be ordered according to increasing electron‐acceptor properties as —CH₂SCH₂Ph < —CH₂SCH₂CH?CH₂ <—CHCl₂. At the liquid nitrogen temperature —CH₂SCH₂Ph and —CH₂SCH₂CH?CH₂ are electron donors, and CHCl₂ is an electron acceptor, whereas at room temperature —CH₂SCH₂Ph is an electron donor and —CH₂SCH₂CH?CH₂ and —CHCl₂ are electron acceptors. The character of the substituent properties is preserved irrespective of whether the system is aromatic or aliphatic. The NQR frequencies and substituents properties are well reproduced by the DFT B3LYP/6–311+G(2d,p) method. The topological properties of the Laplacian of the electron density were analysed within the AIM (atoms in molecules) approach. The changes in the electron density at C‐3 are correlated with the biological activity of the compounds studied. Copyright © 2003 John Wiley & Sons, Ltd.     

Hydrogen-bonding interaction in a complex of amino acid with urea studied by DFT calculations

Theoretical studies on hydrogen-bonded complexes between amino acids (glycine, alanine, and leucine) and urea in gas phase have been carried out using density functional theory (DFT) and ab initio methods at the B3LYP/6-311++g** and MP2/6-311++g** theory levels. The structures, binding energy, Chelpg (charges from electrostatic potentials using a grid-based method) charge distribution, and bond characteristics of the mentioned complexes were calculated. Urea is a good H-bond donor and an excellent receptor for highly electronegative atoms like O and N, through the formation of two or more hydrogen bonds. The NH₂ and COOH groups of amino acids can form several different types of H-bonds with urea molecular, as well as C^αH and alkyl side chains. The calculated high binding energy also suggests multiple H-bonds formed in one complex. The OH···O contact is the strongest hydrogen bond interaction with H···O separation around 1.65 Å and its relevant angle close to 176°. The closely linear amide H-bonds NH···O and OH···N strongly stabilize the amino acid–urea complex with H···O separation between 1.89 and 2.38 Å. The weaker CH···O/N H-bonds are also discussed as significant interaction in biological systems involving amino acids.