Synthesis of novel rigid triazine-based calix[6]arenes

In this report, the stepwise synthesis of a novel rigid and functionalised macrocycle 2 based on triazine and phenylenediamine linkers, is presented. Poor recognition of the macrocycle 2 for its substrates is observed, which shows experimentally that for the meltriazine based-calix[6]arene system, the binding ability of the melamine moiety gets more benefit from the ring flexibility derived from a xylenediamine linker 1 than from a phenylenediamine linker 2.     

Coordination-driven self-organization of switchable [2]rotaxane

A bistable porphyrin-containing [2]rotaxane is synthesized with a shuttling benzylic-amide macrocycle mechanically locked onto the thread subunit by formations of H-bonds with two potential stations. This macrocycle comprises two pyridine groups, which would be easily coordinated with zinc porphyrin. The Zn(II) coordination of porphyrin moiety on the thread subunit, immediately followed by the coordination with pyridine groups on the macrocycle, leads to an intermolecular axle-macrocycle-type nanostructure. Moreover, the self-assembly way shows great difference from the two states of the rotaxane monomer: The coordination-driven self-organization of the trans-state E2 leads to a network structure, whereas the cis-state Z2 gives birth to an irregular assembly.     

Anion binding with some 22- and 28-membered selenaaza macrocycles: Structural aspects and Se NMR studies

A series of macrocyclic adducts of the 22- and 28-membered selenaaza macrocycles (1 and 2, respectively) with different counter anions such as halides, sulfate, perchlorate, phosphate, trifluoroacetate and nitrate has been prepared. The adducts have been characterized by elemental analysis, IR, ¹H NMR, ⁷⁷Se NMR and ESI-MS analysis. The ⁷⁷Se NMR spectrum of the adduct (7) shows an upfield shift compared to the parent macrocycle. The bromo (5), iodo (6), sulfate (7), trifluroacetate (10) adducts of the 22-membered selenaaza macrocycle and perchlorate (16), trifluroacetate (18) adducts of the 28-membered selenaaza macrocycle have been structurally characterized. The crystal structures show extensive hydrogen bonding networks. The molecular structures of all the compounds show the macrocycle to be fully protonated except the trifluroacetate adduct of the 22-membered macrocycle (10), which is only diprotonated. The binding constants of the neutral 22-membered selenaaza macrocycle towards, fluoride, bromide, iodide and sulfate ion have been determined by the NMR titration method.     

Preparation of a new receptor for anions, macrocyclic polythiolactam—structure and high anion-binding ability

Thiocarbonylation of a macrocyclic tetralactam gave a new macrocyclic tetrathiolactam. The chemical transformation enhances hydrogen-bonding ability of the NH protons in the cavity of the macrocycle, and provides strong affinity toward anions. The association properties of the polythiolactam with anions was examined, and molecular structures of the macrocycle and its Cl⁻ complex were determined.     

Gymnorrhizol, an unusual macrocyclic polydisulfide from the Chinese mangrove Bruguiera gymnorrhiza

Gymnorrhizol (1), an unusual novel macrocyclic polydisulfide possessing an unprecedented carbon skeleton, characterized by a 15-membered macrocycle that composed of three repeated 1,3-dimercaptopropan-2-ol units, has been isolated from the Chinese mangrove Bruguiera gymnorrhiza and its structure was determined by extensive spectroscopic studies. A suggestion is made as to its biogenetic origin.     

Synthesis,crystal structure,and photoluminescence of a zinc metalloporphyrin

A zinc metalloporphyrin, ZnTCPP(acetone) (1) (TCPP = meso-tetra(4-carboxyphenyl)porphyrin), has been prepared via a solvothermal reaction and structurally characterized by single-crystal X-ray diffraction. Compound 1 features an isolated structure with a planar macrocycle and an embedded zinc ion binded to four pyrrole nitrogen atoms and one acetone oxygen atom. Photoluminescent investigation reveals that compound 1 displays an intensive emission in the red region.     

A pyridine-based macrocyclic host for urea and acetone

A pyridine-based macrocycle with a polyether chain has been designed and synthesized. The macrocycle shows strong binding for acetone involving both conventional and unconventional hydrogen bonds. The acetone in the cavity is exchangeable in CHCl₃ by urea. This has been studied thoroughly by ¹H NMR, ¹³C NMR, mass and X-ray analyses.     

Using ligand exchange reactions to control the coordination environment of Pt(II) acetylide complexes: applications to conjugated metallacyclynes

Ligand exchange of cis-bis(diphenylphosphino)ethylene (dppee) with trans-(Ph₃P)₂Pt(CCR)₂ easily generates the cis-complexes (dppee)Pt(CCR)₂ in 64-95% yield. This transformation is used to convert pyridine-containing macrocycle 7 to its cis-analogue 8 and the macrocyclic bipyridine analogue 10 to the unique macrocyclic ligand 11. X-ray structural characterization of trans-complexes 5a and 5b and cis-complexes 6a and 6b are reported, as is the structure of the strained macrocycle 8.     

Coordination chemistry of anticrowns: Complexation of cyclic trimeric perfluoro-o-phenylenemercury with nitro compounds

Cyclic trimeric perfluoro-o-phenylenemercury (o-C₆F₄Hg)₃ (1) is capable of reacting with nitromethane to give complex {[(o-C₆F₄Hg)₃](CH₃NO₂)} (2) containing one molecule of the nitro compound per one macrocycle molecule. In this complex, the nitromethane ligand is bound to 1 by its both oxygen atoms, one of which is simultaneously coordinated to all three Hg centres of the macrocycle while the other interacts with a single Hg centre. The complex of similar composition, {[(o-C₆F₄Hg)₃](C₆H₅NO₂)} (3), is produced in the interaction of 1 with nitrobenzene. In this complex too, the both oxygen atoms of the nitro group are involved in the bonding to the macrocycle. A distinctive feature of 3 is that here one oxygen atom of the coordinated nitro derivative is bound by only two Hg centres of 1 whereas the other interacts again with a single Hg site. The reaction of 1 with 5-nitroacenaphthene affords a 1:1 complex, {[(o-C₆F₄Hg)₃](C₁₂H₉NO₂)} (4), having a polydecker sandwich structure in the crystal. Unlike in 3, the aromatic rings of the nitroarene units in 4 are disposed virtually in parallel to the macrocycles. The nitro compound in 4 behaves again as a bidentate ligand, forming three Hg-O bonds with one of the adjacent macrocycles and a single Hg-O bond with another molecule of 1. The complex is characterized also by shortened Hg-C contacts between the Hg centres of 1 and the carbon atoms of the nitroarene moiety as well as shortened C-C contacts between the carbon atoms of the nitroarene and the macrocycle. In the interaction of 1 with 1-nitropyrene, complexes of two compositions, viz. {[(o-C₆F₄Hg)₃](C₁₆H₉NO₂)} (5) and {[(o-C₆F₄Hg)₃](C₁₆H₉NO₂)₃} (6) are formed. An X-ray diffraction study of 6 has shown that in this adduct two of three coordinated molecules of the nitro compound are located on one side of the metallacycle plane while the third nitroarene molecule is disposed on its other side. The aromatic rings of all three nitropyrene ligands in 6 are practically parallel to the mean plane of the macrocycle. In contrast to 2-4, each molecule of the nitroarene in 6 is bonded to 1 by a single oxygen atom which is coordinated only to one Hg centre. In the case of one of the nitropyrene ligands that forms much longer Hg-O bond with 1 than two others, an additional contribution to the bonding is made by shortened Hg-C contacts between the macrocycle and the carbon atoms of the aromatic pyrene core and also by shortened C-C contacts between the carbon atoms of the coordinated nitroarene and 1. The synthesized adducts are the first examples of complexes of an anticrown with nitro compounds.     

Meso-Carbon Atom Nucleophilic Attack Susceptibility in the Sterically Strained Antiaromatic Bis-BODIPY Macrocycle and Extended Electron-Deficient BODIPY Precursor**

A sterically strained 32π-electron antiaromatic bis-BODIPY macrocycle in which two BODIPY fragments are linked by p-divinylbenzene groups was prepared and characterized. Unlike regular BODIPYs, the fluorescence in this macrocycle is quenched. The broad signals in the NMR spectra of the macrocycle were explained by the vibronic freedom of the p-divinylbenzene fragments. The possible diradicaloid nature of the macrocycle was excluded on the basis of variable-temperature EPR spectra in solution and in solid state, which is indicative of its closed-shell quinoidal structure. The meso-C−H bond in the macrocycle and its precursor BODIPY dialdehyde 3 forms a weak hydrogen bond with THF and is susceptible for the nucleophilic attack by organic amines and cyanide anion. The reaction products of such a nucleophilic attack have meso-sp³ carbon atoms and were characterized by NMR, mass spectrometry and, in one case, X-ray crystallography. Unlike the initial bis-BODIPY macrocycle, the adducts have strong fluorescence in the 400 nm region. The electronic structure and spectroscopic properties of new chromophores were probed by density functional theory (DFT) and time-dependent DFT (TDDFT) calculations and correlate well with the experimental data.     

Structurally original oxathioethers macrocycles containing an exocyclic double-bond: synthesis,characterization, reactivity,and coordination

New oxathioethers macrocycles have been synthesized and characterized. Each macrocycle consists in structurally defined ether and thioether moieties and an exocyclic double-bond (2a–c) or a hydroxymethyl group (3a–c). Macrocycles (2a–c) have been synthesized by reaction of dianions of thioethers diols (1a–c) with 3-chloro-2-chloromethylprop-1-ene. Their hydroboration/oxidation led to corresponding primary alcohols (3a–c). Structures of compounds (2b) and (3a) have been determined by X-ray diffraction. The reactivity of the hydroxyl group allowed the preparation of oxathioethers macrocycles bearing a polyether chain or a benzyl group (4a,b) and the synthesis of new bicyclic sandwich-type compounds (5a,b). The ability of these functionalized macrocycles to coordinate to palladium has been investigated.     

Azomacrocyclic derivatives of imidazole: synthesis, structure, and metal ion complexation properties

New azocrown ethers comprising imidazoles in the macrocycle have been synthesized. Imidazole, 2-methyl-, 4-methyl-, and 4-phenylimidazole were incorporated to form macrocyclic units by coupling with the appropriate bis-diazonium salts. The syntheses were performed under high dilution conditions. The X-ray structure of a water adduct of the 21-membered crown ether derivative of 4-methylimidazole 8 has been solved. Metal cation binding was investigated with the use of UV-vis spectroscopy in acetonitrile, methanol, and methanol-water mixtures. The obtained chromoionophores were tested as ion-carriers in ion-selective membrane electrodes.     

The Horner-Wadsworth-Emmons reaction in the synthesis of macrocyclic peptides: the Trp-His-Gly-Arg derived macrocycle of moroidin

The Trp-His-Gly-Arg derived macrocycle 4 of moroidin 1 containing the unusual tryptophan C-2 histidine N-1 link has been synthesised in protected form. The key steps are displacement of a 2-chloroindole with a histidine derived nucleophile, a Horner-Wadsworth-Emmons reaction followed by asymmetric hydrogenation to establish the tryptophan side chain, and incorporation of the Gly-Arg dipeptide by peptide coupling.     

Fluorescent detection of phosphate anion by a highly selective chemosensor in water

A macrocyclic dinuclear copper complex, [Cu₂^II(1)Br₄]·2H₂O has been synthesized and characterized by X-ray crystallography, in which each metal ion is pentacoordinated in a square pyramidal environment and the macrocycle is folded to form a boat-shaped empty cavity. As studied by an indicator displacement assay, the dinuclear complex shows strong selectivity for phosphate over sulfate, nitrate, perchlorate and halides in water at physiological pH.     

Binaphthyl-based chiral macrocyclophanes with variously sized cavities: Dn-symmetrical structure constructed from unidirectionally-inclined rod segments

As new and chiral macrocyclophanes with unique structures, variously sized Pn and Mn (n=2–7=number of ‘rod’ segments) with D₂–D₇ symmetry were constructed by alternating connection of axially chiral binaphthyls and linear biphenyls via –CH₂O– moieties, so that the macrocycle consists of multiple rod-like naphthalene–biphenyl–naphthalene units linked together at the binaphthyl bonds. The dihedral angle of the two naphthalene rings of binaphthyl is restricted to around 90°, and the calculated values of strain energy difference per naphthalene–biphenyl unit in P2–P7 are almost independent of the macrocycle size, presumably owing to the flexibility of the –CH₂O– connectors.     

Self-assembly of a novel 2D network polymer: Syntheses, characterization, crystal structure and properties of a four-tin-nuclear 36-membered diorganotin(IV) macrocyclic carboxylate

The novel macrocyclic complex (n-Bu₂SnL)₄·2C₆H₆1 (LH₂ = naphthalene-1,4-dicarboxylic acid, C₆H₆ = benzene) has been synthesized by the reaction of di-n-butyltin oxide and rigid naphthalene-1,4-dicarboxylic acid. Single crystal X-ray diffraction analyse shows that complex 1 has a centrosymmetric tetranuclear diorganotin dicarboxylate with 36-membered macrocycle, which is formed by n-Bu₂Sn and ligand alternately linking. All four Sn atoms are hexacoordinated, and the coordination environment can be considered as a skew-trapezoidal bipyramidal with an anisobidentate coordination mode of the carboxylate groups. Luminescent property study of complex 1 has shown that the fluorescent peak was blue-shifted and the fluorescent intensity strengthened markedly compared with ligand. Pilot studies indicated that complex 1 has shown good antitumor activities. This complex 1 is likely to serve as a new model for further investigation on the structure-antitumor activity relationship.     

Synthesis and spectroscopic properties of monocyclic and bicyclic erbium phtalocyanines

Bimacrocyclic and monomacrocyclic erbium phtalocyanines have been synthesized and their luminescence spectra and lifetimes have been studied. The bi-planar structure of ErPc₂ complexes, although interesting at first sight, is non-luminescent because of a strong absorption band near 1.5 μm. However, the luminescence of the erbium ion can be recovered after oxidation or reduction of the macrocycle. Monomacrocyclic erbium phtalocyanines exhibit a strong luminescence of erbium as a result of the energy transfer between the excited phtalocyanine macrocycle and the erbium ion. With a perchlorinated phtalocyanine and a perdeuterated axial ligand in a deuterated solvent, the luminescence lifetime reaches 5 μs, which is the maximum lifetime found for conventional perdeutarated ligands. The large absorption cross-section of phtalocyanine in the red may counterbalance the fast luminescence lifetime, allowing the hope for a new all-organic integrated optical amplifier device.     

Total synthesis of LL-Z1640-2 utilizing a late-stage intramolecular Nozaki-Hiyama-Kishi reaction

A total synthesis of LL-Z1640-2 (2), a potent and selective kinase inhibitor, has been completed. The key step of the convergent synthesis utilized a late-stage intramolecular Nozaki-Hiyama-Kishi (NHK) reaction to close the macrocycle at the C6′-C7′ bond.     

Novel chiral Schiff base macrocycles containing azobenzene chromophore: gelation and guest inclusion

A novel chiral Schiff base macrocycle 1 was synthesized by [3+3] condensation of enantiomerically pure trans-1,2-diaminocyclohexane with azobenzene-4,4′-dicarbaldehyde. Subsequent reduction of 1 afforded macrocyclic hexamine 2 having three azobenzene units. The former could be converted into a benzene gel, while the latter could include several aromatic guest molecules.     

Bis(benzo)triazinethionoaza-14-crown-4 ether and its complex with CoBr<Subscript>2</Subscript>: Synthesis and crystal structures

8,11,14-Trioxa-22,24,25-triazatetracyclo[19.3.1.0^2,7.0^15,20]pentacosa-2,4,6,15(20),16,18-hexaene-23-thione (L) containing a symmetric triazinethione subunit in its macrocycle and its complex with cobalt(II) bromide of the formula [CoL₂Br₂] · 0.5CHCl₃ (I) were obtained and examined by X-ray diffraction, IR and NMR spectroscopy, and mass spectrometry. It was found that the thiourea fragment in compound L is attached to the nitrogen macrocycle through the C(2) and C(19) atoms, thus forming a substantially nonplanar six-membered triazine ring in a slightly distorted sofa conformation. Its mean-square plane is nearly perpendicular to the mean-square plane of the macrocycle (the dihedral angle between them is 83.3°). Structure L is stabilized by two bifurcate endocyclic hydrogen bonds between the N(1) atom of the triazine ring and the O(1) and O(3) atoms. The size of the macrocyclic cavity is 4.07 Å. The coordination polyhedron of the Co atom is a distorted tetrahedron made up of the sulfur atoms of two monodentate terminal molecules L and two bromine atoms.