Synthesis and characterization of the aqueous solution chemistry of the food-derived carcinogen model N-acetoxy-N-(1-methyl-5H-pyrido[4,5-b]indol-3-yl)acetamide and its N-pivaloyloxy analogue

We report the synthesis of N-acetoxy-N-(1-methyl-5H-pyrido[4,5-b]indol-3-yl)acetamide, 7, its N-pivaloyloxy analogue, 9, and improved synthesis of indole-2-acetonitrile, 3 (70% in five steps from indole-2-carboxylic acid), the carcinogenic amine Trp-P-2, 4 (40% from 3), and the nitro compound, 5 (40% from 4 by oxidation with H₂O₂ using Mo(CO)₆ catalyst). In aqueous solution at neutral pH, 7 primarily undergoes C-O bond cleavage to yield the hydroxamic acid, 8, but under the same conditions the sterically hindered 9 decomposes predominately by N-O bond cleavage with a pH independent rate constant that is 7.5-fold smaller than that for 7. In the pH range 0.5-7.0 three different processes for the decomposition of 9 were detected by kinetics. Only the process that dominates at neutral pH generates a nitrenium species that can be trapped by N₃⁻.     

Synthesis of (±)-phthalascidin 650 analogue: new synthetic route to (±)-phthalascidin 622

A synthesis of functionalized phenolic α-amino-alcohol (±)-13 as synthetic precursor of the catechol tetrahydroisoquinoline structure of phthalascidin 650 is disclosed. Starting from 3-methylcatechol 5, eight steps of synthesis give rise to the synthesis of phenolic α-amino-alcohol (±)-13 in 27% overall yield. This synthetic strategy involves the elaboration of fully functionalized aromatic aldehyde 8 and its transformation into a phenolic α-amino-alcohol (±)-13, through a Knoevenagel condensation, simultaneous reduction of nitroketene and ester functions and hydrogenolysis of the benzyl protecting group. The pentacycle (±)-18 was obtained after four additional steps. The Pictet-Spengler cyclisation between the phenolic α-amino-alcohol (±)-13 and N-protected α-amino-aldehyde 4 allowed to obtain (1,3′)-bis-tetrahydroisoquinoline 14 with N-methylated and N-Fmoc removed. The last step was a Swern oxidation for allowing an intramolecular condensation.     

An unexpected oxidative decarboxylation reaction of 2,3-dihydroxybenzoic acid in the synthesis of new dibenzyltetrahydroquinoxalinediones

Chemical and electrochemical oxidation of different catechols were carried out in the presence of N,N′-dibenzylethylenediamine (DBEDA) in a phosphate buffer/acetonitrile solution for the synthesis of different new dibenzyltetrahydroquinoxalinedione derivatives. The oxidation of catechol (1a), 2,3-dihydroxybenzoic acid (1e), and 3,4-dihydroxybenzoic acid (1d) led to the same product, probably due to the decarboxylation reaction of intermediates. An oxidative decarboxylation reaction of 3,4-dihydroxybenzoic acid (1d) has been reported before, while an unexpected oxidative decarboxylation reaction of 2,3-dihydroxybenzoic acid (1e) in the presence of DBEDA is reported for the first time.     

To seek an approach toward the chemical conversion of C19-diterpenoid alkaloids to taxoids

This study, as a part of conversion of the C₁₉-diterpenoid alkaloids to the taxoids, described the search of a suitable route to the key intermediate B with four approaches (ABC, ACB, BCA, and CAB) designed and examined. In these cases, a new and efficient approach (CAB) toward the synthesis of the vital intermediates 51 or 52 has been developed. The key steps include the use of a semipinacol rearrangement treatment of 41 with NaOH/DMF under refluxing conditions for 30 min to afford 42, and the rupture of the N-C-19 bond found in 45 or 48 to give 51 or 52, respectively, through NBS imination followed by the creation of the oxaziridine 47 or the nitrone 50 and finally HIO₄ oxidation cleavages.     

Half sandwich complexes of Ru(II) and complexes of Pd(II) and Pt(II) with seleno and thio derivatives of pyrrolidine: Synthesis, structure and applications as catalysts for organic reactions

The reactions of PhSe⁻, PhS⁻ and Se²⁻ with N-{2-(chloroethyl)}pyrrolidine result in N-{2-(phenylseleno)ethyl}pyrrolidine (L1), N-{2-(phenylthio)ethyl}pyrrolidine (L2), and bis{2-pyrrolidene-N-yl)ethyl selenide (L3), respectively, which have been explored as ligands. The complexes [PdCl₂(L1/L2)] (1/7), [PtCl₂(L1/L2)] (2/8), [RuCl(η⁶-C₆H₆)(L1/L2)][PF₆] (3/9), [RuCl(η⁶-p-cymene)(L1/L2)][PF₆] (4/10), [RuCl(η⁶-p-cymene)(NH₃)₂][PF₆] (5) and [Ru(η⁶-p-cymene)(L1)(CH₃CN)][PF₆]₂·CH₃CN (6) have been synthesized. The L1-L3 and complexes were found to give characteristic NMR (Proton, Carbon-13 and Se-77). The crystal structures of complexes 1, 3-6, 9 and 10 have been solved. The Pd-Se and Ru-Se bond lengths have been found to be 2.353(2) and 2.480(11)/2.4918(9)/2.4770(5) Å, respectively. The complexes 1 and 7 have been explored for catalytic Heck and Suzuki-Miyaura coupling reactions. The value of TON has been found up to 85 000 with the advantage of catalyst’s stability under ambient conditions. The efficiency of 1 is marginally better than 7. The Ru-complexes 3 and 9 are good for catalytic oxidation of primary and secondary alcohols in CH₂Cl₂ in the presence of N-methylmorpholine-N-oxide (NMO). The TON value varies between 8.0 × 10⁴ and 9.7 × 10⁴ for this oxidation. The 3 is somewhat more efficient catalyst than 9.     

Synthesis, structure and electrochemical properties of N-substituted diiron azadithiolates as active site models of Fe-only hydrogenases

As biomimetic models for the active site of Fe-only hydrogenases,six new N-substituted diiron azadithiolates (ADT) were prepared.Treatment of CH₂Cl₂ solutions of primary amines RNH₂ with paraformaldehyde followed by an excess of SOCl₂ gave N,N-bis(chloromethyl)amines RN(CH₂Cl)₂ (1,R = CH₂CO₂Et;2,C₆H₄C(O)Me-p;3,C₆H₄CO₂Me-p;4,C₆H₄SCN-p) in 30-90% yields.Further treatment of the chloromethylated amines 1-4 with (μ-LiS)₂Fe₂(CO)₆ in THF resulted in formation of the corresponding N-substituted ADT-type models [(μ-SCH₂)₂NR]Fe₂(CO)₆ (5,R = CH₂CO₂Et;6,C₆H₄C(O)Me-p;7,C₆H₄CO₂Me-p;8,C₆H₄SCN-p) in 24-75% yields.Also prepared were the N-substituted models [(μ-SCH₂)₂NC(O)CH₂C₁₀H₇-α]Fe₂(CO)₆ (9) and 1,4-[Fe₂(CO)₆(μ- SCH₂)₂NC(O)]₂C₆H₄ (10) by reaction of CH₂Cl₂ solutions of [(μ-SCH₂)₂NH]Fe₂(CO)₆ with α-C₁₀H₇CH₂COCl and 1,4-C₆H₄(COCl)₂ in 81% and 28% yields, respectively. All the new compounds 1-10 were characterized by elemental analysis and spectroscopy, as well as for 5-7 and 9 by X-ray crystallography. The crystallographic studies indicated that the functionality of 5 attached to the bridged N atom lies in an equatorial position, whereas those of functionalities of 6, 7, and 9 are located in an axial position. This is presumably due to different electronic and steric effects between the N-substituted aliphatic and aromatic functionalities. More interestingly, model 7 has been found to be a catalyst for proton reduction in the presence of either strong acid CF₃CO₂H or weak acid HOAc under electrochemical conditions. In addition, two mechanisms ECCE and EECC are preliminarily suggested for such two electrocatalytic H₂ production processes, respectively.     

Synthesis, structures and electrochemical properties of ruthenium (II) complexes bearing bidentate 1,8-naphthyridine and terpyridine analogous (N,N,C)-tridentate ligands

1,8-Naphthyridine (napy) and terpyridine-analogous (N,N,C) tridentate ligands coordinated ruthenium (II) complexes, [RuL(napy-κ²N,N′) (dmso)](PF₆)₂ (1: L=L¹=N″-methyl-4′-methylthio-2,2′:6′,4″-terpyridinium, 2: L = L² = N″-methyl-4′-methylthio-2,2′:6′,3″-terpyridinium) were prepared and their chemical and electrochemical properties were characterized. The structure of complex 1 was determined by X-ray crystallographic study, showing that it has a distorted octahedral coordination style. The cyclic voltammogram of 1 in DMF exhibited two reversible ligand-localized redox couples. On the other hand, the CV of 2 shows two irreversible cathodic peaks, due to the Ru-C bond of 2 containing the carbenic character. The IR spectra of 1 in CO₂-saturated CH₃CN showed the formation of Ru-(η¹-CO₂) and Ru-CO complexes under the controlled potential electrolysis of the solution at −1.44 V (vs. Fc/Fc⁺). The electrochemical reduction of CO₂ catalyzed by 1 at −1.54 V (vs. Fc/Fc⁺) in DMF-0.1 M Me₄NBF₄ produced CO with a small amount of HCO₂H.     

Synthesis, structure and photo-physical properties of phosphorus-supported fluorescent probes

Various phosphorus-supported fluorescent probes have been synthesized by the condensation reaction of multi-functional phosphorus hydrazides with various fluorophore-containing carboxaldehydes. Compounds, thus prepared, in this study are (PhO)₂P(O)[N(Me)-NCH-R] (1a, 1b), Ph₂P(O)[N(Me)-NCH-R] (2b, 2c, 2d), PhP(O)[N(Me)-NCH-R]₂ (3b, 3c), P(S)[N(Me)-NCH-R]₃ (4b, 4c), P(O)[N(Me)-NCH-R]₃ (5a, 5b, 5c), N₃P₃(O₂C₁₂H₈)₂[N(Me)-NCH-R]₂ (6a, 6b, 6c), N₃P₃(O₂C₁₂H₈)[N(Me)-NCH-R]₄ (7a, 7b, 7c, 7d) and N₃P₃[N(Me)-NCH-R]₆ (8b, 8c), where R=1-pyrenyl (a), 9-anthracenyl (b), 9-phenanthryl (c) and 7-(N,N′-diethylamino)-3-coumarinyl (d). All of these compounds have been characterized by various analytical techniques including ³¹P{¹H} NMR spectroscopy. Compounds 1b, 2b, 3b, 4b, 5b, 5c and 6d have also been characterized by single crystal X-ray analysis. All of these phosphorus-supported compounds exhibit excellent fluorescence properties in aqueous solution at near physiological conditions.     

Further studies of tetrakis(N,N′-dialkylbenzamidinato)diruthenium(III) chloro and alkynyl compounds: molecular engineering of metallayne monomers

Three diruthenium(III) compounds Ru₂(L)₄Cl₂, where L is mMeODMBA (N,N′-dimethyl-3-methoxybenzamidinate, 1a), DiMeODMBA (N,N′-dimethyl-3,5-dimethoxy benzamidinate, 1b), or DEBA (N,N′-diethylbenzamidinate, 1c), were prepared from the reactions between Ru₂(OAc)₄Cl and respective HL under reflux conditions. Metathesis reactions between 1 and LiC₂Y resulted in bis-alkynyl derivatives Ru₂(L)₄(C₂Y)₂ [Y=Ph (2), SiMe₃ (3), SiⁱPr₃ (4) and C₂SiMe₃ (5)]. The parent compounds 1 are paramagnetic (S=1), while bis-alkynyl derivatives 2-5 are diamagnetic and display well-solved ¹H- and ¹³C-NMR spectra. Molecular structures of compounds 1b, 1c, 2c, 3c and 4b were established through single crystal X-ray diffraction studies, which revealed RuRu bond lengths of ca. 2.32 Å for parent compounds 1 and 2.45 Å for bis-alkynyl derivatives. Cyclic voltammograms of all compounds feature three one-electron couples: an oxidation and two reductions, while the reversibility of observed couples depends on the nature of axial ligands.     

Synthesis and hybridization affinity of oligodeoxyribonucleotides incorporating 4-N-(N-arylcarbamoyl)deoxycytidine derivatives

Modified oligodeoxynucleotides incorporating 4-N-(N-arylcarbamoyl)-dC derivatives 1a-c were synthesized. The ¹H NMR spectra of 1a-c suggest that the carbamoyl group forms an intramolecular hydrogen bond with the cytosine ring nitrogen atom so that formation of a Watson-Crick base pair with the complementary guanine base is inhibited. The hybridization properties of oligodeoxynucleotides containing 1a-c were investigated by use of T_m analysis. The hybridization properties of 4-N-(N-phenylcarbamoyl)-dC (1a) were similar to those of 4-N-(N-alkylcarbamoyl)-dC derivatives reported previously. In sharp contrast to 1a, it turned out that 4-N-(N-napht-1-yl) and (N-quionol-5-yl)-dC (1b,c) have a unique property as a universal base.     

Samarium diiodide-mediated reductive couplings of chiral nitrones with aldehydes/ketones and acyl chlorides

The SmI₂-mediated and H₂O-promoted reductive cross-coupling reactions of the l-tartaric acid derived nitrone (3S,4S)-8 with aldehydes/ketones, and the l-malic acid derived nitrone (S)-6 with aliphatic acyl chlorides have been investigated, respectively. (2R,3S,4S)-1,3,4-Trihydroxyprolinol derivatives 9a-f were obtained with high C-2/C-3 trans-selectivities, and 72:28-85:15 diastereoselectivities at the carbinol center from aromatic ketones/aldehydes, while low diastereoselectivities for aliphatic aldehydes. Conditions have been established for the syntheses of (2R,3S,4S)-3,4-dihydroxyprolinol derivatives such as 18, by N-O bond cleavage of the corresponding N-hydroxyprolinol derivatives 9b-f, or more conveniently by a one-pot reductive coupling of nitrone 8 and in situ N-O bond cleavage of the resultant coupling product. The 2-acyl-3-benzyloxy-1-hydroxypyrrolidines 10a-f were formed in 48-82% yields, and in 74:26-78:22 diastereoselectivities. It was revealed that the amount of water required for the reaction is substrate-depending.     

Functionalization of C60 via organometallic reagents

The reaction of [60]fullerene with organolithium and Grignard reagents carrying orthoester, acetal or other end groups yielded adducts 3-5 at the 6-6 bond of C60 after quenching with trifluoroacetic acid. The adducts could be easily methylated or benzylated with methyl iodide or benzyl bromide in the presence of potassium tert-butoxide to yield exclusively the 1,4-disubstituted C60 6 and 7a,b. Cleavage of the orthoester, acetal and silylether groups gave the corresponding carboxylic acid 9, aldehydes 10a,b and 11 and alcohols 12 and 13a,b. The carboxylic acid 9 readily reacted with alanine ethyl ester under standard peptide coupling conditions to give 14 in 55% yield. Attempts to generate a silyl enol ether from the reaction of aldehyde 10b with TIPSOTf and triethylamine failed. Instead the reaction led to a cyclized ether 16a (or alcohol 16b in the absence of silylating agent) resulting from the addition of an initially formed fulleride anion to the aldehyde group. The corresponding acetal 4b reacted similarly. The reaction of aldehyde 10b with aniline also gave a cyclized product 19. Surprisingly, aldehyde 11, which no longer carried an acidic fullerene proton reacted with aniline to give a product 20 resulting from an intramolecular Diels-Alder reaction followed by aromatization of a primarily formed N-phenylimine. Alcohol 13b could be readily converted to the corresponding bromide using tetramethyl-α-bromoenamine. The bromide was reacted with the carbanion derived from the protected glycine derivative to yield the diastereomeric fullerene amino acid derivatives 1-benzyl-4-[α-propyl-tert-butylglycinate benzophenone imine] 1,4-dihydro[60]fullerenes 24a and 24b.     

Activation of C-H and C-Br bonds in cyclopalladation reactions of Schiff base ligands: Influence of the benzylidene ring substituents

Reaction of Pd(AcO)₂ with the Schiff base ligands 2-Br-4,5-(OCH₂O)C₆H₂C(H)N(Cy) (a) and 4,5-(OCH₂CH₂)C₆H₃C(H)N(Cy) (b) leads to the cyclometallated compounds [Pd{2-Br-4,5-(OCH₂O)C₆HC(H)N(Cy)-C6,N}(μ-O₂CMe)]₂ (1a) and [Pd{4,5-(OCH₂CH₂)C₆H₂C(H)N(Cy)-C6,N}(μ-O₂CMe)]₂ (1b), respectively, via C-H activation. Treatment of a with Pd₂(dba)₃ gave [Pd{4,5-(OCH₂O)C₆H₂C(H)N(Cy)-C2,N}(μ-Br)]₂ (6a), via C-Br activation. The metathesis reaction of 1a and 1b with aqueous sodium chloride gave the corresponding cyclopalladated dimers with bridging chloride ligands, 2a and 2b, respectively. Treatment of the halogen-bridged compounds with tertiary tri- and diphosphines in the appropriate molar ratio gave the mono and dinuclear compounds 3a-5a, 7a-9a and 3b-5b. The structure of compounds 3a, 4a, 5a, 8a, 2b, 3b and 5b has been determined by X-ray diffraction analysis.     

Syntheses, structural, electrochemical and optical studies of heterobinuclear ruthenium-osmium alkynyl complexes

The complexes trans-[Os(CCC₆H₄-4-CCR)Cl(dppe)₂] (R = SiPrⁱ₃1, H 2), trans,trans-[(dppe)₂ClOs(CCC₆H₄-4-CC)RuX(dppe)₂] (X = Cl 3, CCC₆H₄-4-CCSiPrⁱ₃4), trans-[Os(CCC₆H₄-4-CCC₆H₄-4-CCR)Cl(dppe)₂] (R = SiPrⁱ₃5, H 6), and trans,trans-[(dppe)₂ClOs(CCC₆H₄-4-CCC₆H₄-4-CC)RuCl(dppe)₂] (7) have been synthesized, and the identities of 1, 2, and 6 confirmed by single-crystal X-ray diffraction studies. Cyclic voltammetry shows that the mononuclear complexes 1, 2, 5, and 6 are oxidized at potentials within a narrow range (0.45-0.49 V), in processes centered on the osmium ethynyl neighbourhood and for simplicity assigned as Os^II/III, while the heterobinuclear complexes 3, 4, and 7 exhibit lower oxidation potentials for Os^II/III and a second oxidation process assigned in a similar fashion to Ru^II/III; the difference in potential between the Os- and Ru-localized processes decreases as the π-bridge is lengthened. UV-vis-NIR spectroelectrochemical studies on 1 and 5 reveal the appearance on oxidation of a low-energy band ascribed to chloro to metal-ethynyl charge transfer. Osmium-centered oxidation at the heterobinuclear complexes 4 and 7 results in appearance of a low-energy band, which blue-shifts and increases in intensity on further oxidation to 4²⁺ and 7²⁺.     

Regio- and stereoselective reactions of a rhodanine derivative with optically active 2-methyl- and 2-phenyloxirane

The reaction of a rhodanine derivative (=(Z)-5-benzylidene-3-phenyl-2-thioxo-1,3-thiazolidin-4-one; 1) with (S)-2-methyloxirane (2) in the presence of SiO₂ in dry CH₂Cl₂ for 10 days led to two diastereoisomeric spirocyclic 1,3-oxathiolanes 3 and 4 with the Me group at C(2) (Scheme 2). The analogous reaction of 1 with (R)-2-phenyloxirane (5) afforded also two diastereoisomeric spirocyclic 1,3-oxathiolanes 6 and 7 bearing the Ph group at C(3) (Scheme 3). The structures of 3, 4, 6, and 7 were confirmed by X-ray crystallography (Figs. 1 and 2). These results show that oxiranes react selectively with the thiocarbonyl group (CS) in 1. Furthermore, the nucleophilic attack of the thiocarbonyl S-atom at the SiO₂-activated oxirane ring proceeds with high regio- and stereoselectivity via an S_N2-type mechanism.     

Rhodium complexes with chiral counterions: achiral catalysts in chiral matrices

The neutral complexes [Rh(I)(NBD)((1S)-10-camphorsulfonate)] (2) and [Rh(I)((R)-N-acetylphenylalanate)] (4) reacted with bis-(diphenylphosphino)ethane (dppe) to form the cationic Rh(I)(NBD)(dppe) complexes, 5 and 6, respectively, accompanied by their corresponding chiral counteranions. Analogously, 4 reacted with 4,4^′-dimethylbipyridine to yield complex 7. Complexes 5 and 6 disproportionated in aprotic solvents to form the corresponding bis-diphosphine complexes 8 and 9, respectively. 8 was characterized by an X-ray crystal structure analysis. In order to form achiral Rh(I) complexes bearing chiral countercations new sulfonated monophosphines 13-16 with chiral ammonium cations were synthesized. Tris-triphenylphosphinosulfonic acid (H₃TPPS, 11) was used to protonate chiral amines to yield chiral ammonium phosphines 14-16. Thallium-tris-triphenylphosphinosulfonate (Tl₃TPPS, 12) underwent metathesis with a chiral quartenary ammonium iodide to yield the proton free chiral ammonium phosphine 13. Phosphines 15 and 16 reacted with [Rh(NBD)₂]BF₄ to afford the highly charged chiral zwitterionic complexes [Rh(NBD)(TPPS)₂][(R)-N,N-dimethyl-1-(naphtyl)ethylammonium]₅ (17) and [Rh(NBD)(TPPS)₂][BF₄][(R)-N,N-dimethyl-phenethylammonium]₆ (18), respectively. Complexes 5, 6, and 18 were tested as precatalysts for the hydrogenation of de-hydro-N-acetylphenylalanine (19) and methyl-(Z)-(α)-acetoamidocinnamate (MAC, 20) under homogeneous and heterogeneous (silica-supported and self-supported) conditions. None of the reactions was enantioselective.     

A versatile approach to pyrrolidine azasugars and homoazasugars based on a highly diastereoselective reductive benzyloxymethylation of protected tartarimide

A highly diastereoselective synthesis of enantio-enriched all trans-3,4-dibenzyloxyl-5-benzyloxymethyl-2-pyrrolidinone 13a was developed based on SmI₂-mediated benzyloxymethylation of O,O′-dibenzyltartarimide. The versatility of 13a and its antipode as the key building blocks for the asymmetric synthesis of pyrrolidine azasugars and homoazasugars has been demonstrated by elaborating them into naturally occurring DAB 1 (1), LAB 1 (2), N-hydroxyethyl-DAB 1 (4), 6-deoxy-DMDP 7, and 5-epi-radicamine B 36 as well as the reductive ring-opening product 35.     

Synthesis and reactions of sulfur-substituted indolizidinones

An aza-Diels-Alder reaction product 2 was readily converted to a tetrahydropyridine derivative 6, but its N-benzyl group was unexpectedly difficult to cleave under various conditions. On the other hand, the N-tosyl α,β-unsaturated ester 14 was transformed in one step by Mg/MeOH/Et₃N to a thio-substituted indolizidinone 3. This method was also extended to a methyl-substituted diene 16, which stereoselectively provided the cis-2,6-disubstitutedproduct 17. Further synthetic transformations yielded indolizidinones 20-24, including a formal synthesis of the natural product monomorine I.     

Endo and exo cyclometallated iron carbonyl complexes derived from N-(N′-methyl-2-pyrrolylmethylidene)-2-thienylmethylamine

The reaction of N-(N′-methyl-2-pyrrolylmethylidene)-2-thienylmethylamine (1) with Fe₂(CO)₉ in refluxing toluene gives endo cyclometallated iron carbonyl complexes 2 and 5, exo cyclometallated iron carbonyl complex 3, and unexpected iron carbonyl complex 4. Complexes 2, 3, and 5 are geometric isomers. Complex 5 differs from complex 2 in the switch of the original substituent from α to β position of the pyrrolyl ring, and the pyrrolyl ring bridges to the diiron centers in μ-(3,2-η¹:η²) coordination mode in stead of μ-(2,3-η¹:η²). In complex 4, the pyrrolyl moiety of the original ligand 1 has been displaced by a thienyl group, which comes from the same ligand. Single crystals of 2, 3, and 5 were subjected to the X-ray diffraction analysis. The major product 2 undergoes: (i) thermolysis to recover the original ligand 1; (ii) reduction to form a hydrogenation product, 6, of the original ligand; (iii) substitution to form a monophosphine-substituted complex 7; (iv) chemical as well as electrochemical oxidation to produce a carbonylation product, γ-butyrolactam 8.