Reaction of CH3O2 and HO2: Ab initio characterization of dimer structure and vibrational mode analysis for reaction mechanisms

All species involved in the multi‐channel reaction of CH₃O₂ with HO₂ have been investigated using density functional theory (DFT). The molecular geometries for various species are optimized employing the B3LYP method implementing the 6‐311++G** basis set. The relative energies of all species are calculated at the same level theory. The results show that there are two kinds of channels: singlet and triplet. The singlet channel involves four intermediates and six transition states. The triplet channel includes two intermediates and two transition states. There are four kinds of reaction products: CH₃OOH + ¹O₂, CH₃OH + O₃, CH₄ + 2O₂, and CH₃OOH + ³O₂. The vibrational mode analysis is used to elucidate the relationships of the intermediates, the transition states, and the products. The extensive investigation shows that the reaction mechanism is reliable. © 2005 Wiley Periodicals, Inc. Int J Quantum Chem, 2006     

Theoretical study on the atmospheric reaction of CH3O2 with OH

A quantum chemical investigation on the reaction mechanism of CH₃O₂ with OH has been performed. Based on B3LYP and QCISD(T) calculations, seven possible singlet pathways and seven possible triplet pathways have been found. On the singlet potential energy surface (PES), the most favorable channel starts with a barrierless addition of O atom to CH₃O₂ leading to CH₃OOOH and then the O? O bond dissociates to give out CH₃O + HO₂. On the triplet PES, the calculations indicate that the dominant products should be ³CH₂O₂ + H₂O with an energy barrier of 29.95 kJ/mol. The results obtained in this work enrich the theoretical information of the title reaction and provide guidance for analogous atmospheric chemistry reactions. © 2015 Wiley Periodicals, Inc.     

Theoretical study on the atmospheric reaction of CH3SH with O2

A detailed study on the reaction mechanism of CH₃SH with O₂ was carried out using quantum chemical methods. Eleven singlet pathways and four triplet pathways were found based on CCSD(T)//M06-2x calculations. The nature of chemical bonding evolution was also studied using electron localization function and atoms in molecules analysis. Moreover, reaction rate constants were calculated between 200 and 800 K at the level of the transition state theory by Wigner tunneling correction. The results suggest that the main products should be CH₂SO, H₂O, CH₃OH, SO, CH₄, and SO₂, respectively, basically coinciding with the experimental results. The corresponding feasible pathways are channels R7, R8, and R9, respectively, with an effective energy barrier of 56.21 kJ/mol. Obviously, given the low energy barrier similar to the main paths mentioned above, the products CH₂SH and HO₂ should assume a definite proportion in all possible products, although such species were not yet detected in experiment.     

A density functional theory study on the atmospheric reaction of CH3O2 with HS: Mechanism and kinetics

The reaction mechanism of CH₃O₂ and HS was systematically investigated by density functional theory (DFT). Six singlet pathways and seven triplet ones are located on the potential surface (PES). The result indicates that the main products are CH₃O and HSO both on the singlet and triplet PES, different from the CH₃O₂ + OH reaction. Moreover, deformation density (ρ_def) and atoms in molecules (AIM) analyses were carried out to further uncover the nature of chemical bonding evolution in the primary pathways. Furthermore, reaction rate constants were calculated in the temperature range from 200 to 1000 K using the transition state theory with the Wigner and Eckart tunneling corrections. Our results can shed light on the title reaction and offer instructions for analogous atmospheric reactions, as well as experimental research in the future.     

Theoretical study on the reaction mechanisms of CH2SH + NO reaction

The mechanisms for the CH₂SH + NO reaction were investigated on both of the singlet and triplet PES at the BMC-CCSD//B3LYP/6-311+G(d,p) level. The results indicate that the singlet PES is much lower than the triplet PES energetically; therefore, the reaction occurs on the singlet PES dominantly. The most favorable channel on the singlet PES takes place by a barrierless addition of N atom to CH₂SH radical to form HSCH₂NO. Subsequently, the rearrangement of the initial adduct HSCH₂NO (IM1) to form another intermediate IM3 via a four-center transition state, followed by the C–O bond fission in IM3 leading to the major product CH₂S + HNO. Due to high barriers, other product including HC(N)SH + HO, HON + CH₂S, and HNO + CHSH could be negligible. The direct abstraction channel was also determined to yield CH₂S + HON. With high barrier (33.3 kcal/mol), it is not competitive with the addition channel, in which all stationary points are lower than reactant energetically. While on the triplet PES, with the lowest barrier height (18.8 kcal/mol), the direct N-abstracted channel to form CH₂S + HNO is dominant. However, it is not competitive with the channels on the singlet PES. Our results are in good accordance with experimental conclusions that the reaction proceeds via addition mechanism.     

HO2自由基与NO2反应通道的理论研究

应用密度泛函理论DFT/B3LYP对HO₂＋NO₂反应进行了研究, 在B3LYP/6-311G^**和CCSD(T)/6-311G^**水平上计算了HO₂自由基与NO₂分子反应的单重态和三重态反应势能面, 计算结果表明, 单重态反应势能面中的直接氢抽提反应机理是此反应的主要反应通道, 即HO₂自由基的氢原子转移到NO₂分子的氮原子上形成产物P₁ (HNO₂＋³O₂), 另一个可能的反应通道是单重态反应势能面上HO₂中的端位氧原子进攻NO₂分子中的氮原子形成中间体1 (HOONO₂), 接着中间体1 (HOONO₂)经过氢转移形成产物P₂ (trans-HONO＋³O₂), 以上两个反应通道都是放热反应通道, 分别放热90.14和132.52 kJ•mol^－1.     

Ab initio quantum chemical studies of the reactions of CF3CFHO2 with HO2

The potential energy surface (PES) for the CF₃CFHO₂+HO₂ reaction has been theoretically investigated using the DFT [B3LYP/6‐311G(d,p)] and B3LYP/6‐311++G(3df,3pd)//B3LYP/6‐311G(d,p) levels of theory. Both singlet and triplet PESs are investigated. The reaction mechanism on the triplet surface is simple. It is revealed that the formation of CF₃CFHOOH+³O₂ is the dominant channel on the triplet surface. On the basis of the ab initio data, the total rate constants for the reaction CF₃CFHO₂+HO₂ in the T = 210–500 K range have been computed using conventional transition state theory with Wigner's tunneling correction and have been fitted by a rate constant expression as k = 1.04 ×10^?12(cm³ molecule^?1 s^?1) exp (700.33/T). Calculated transition state rate constants with Wigner's tunneling correction for the reaction CF₃CFHO₂+HO₂ are in good agreement with the available experimental values. © 2006 Wiley Periodicals, Inc. Int J Quantum Chem, 2007     

Theoretical study on the reaction mechanism of CH2SH + NO2

The mechanisms of CH₂SH with NO₂ reaction were investigated on the singlet and triplet potential energy surfaces (PES) at the BMC-CCSD//B3LYP/6-311 + G(d,p) level. The result shows that the title reaction is more favourable on the singlet PES thermodynamically, and it is less competitive on the triplet PES. On the singlet PES, the initial addition of CH₂SH with NO₂ leads to HSCH₂NO₂ (IM2) without any transition state, followed by a concerted step involving C–N fission and shift of H atom from S to O giving out CH₂S + trans-HONO, which is the major products of the title reaction. With higher barrier height, the minor products are CH₂S + HNO₂, formed by a similar concerted step from the initial adduct HSCH₂ONO (IM1). The direct abstraction route of H atom in SH group abstracted by O atom might be of some importance. It starts from the addition of the reactants to form a weak interaction molecular complex (MC3), subsequently, surmounts a low barrier height leading to another complex (MC2), which gives out CH₂S + trans-HONO finally. Other direct hydrogen abstraction channels could be negligible with higher barrier heights and less stable products.     

Ab initio quantum chemical studies on the reactions of CF3O2 with OH

The potential energy surface for the CF₃O₂ + OH reaction has been theoretically investigated using the DFT (B3LYP/6-311G(d,p)) level of theory. Both singlet and triplet potential energy surfaces are investigated. The reaction mechanism on the triplet surface is simple. However, the reaction mechanism on the singlet surface is more complicated. It is revealed that the formation of CF₃O + HO₂ is the dominant channel on the triplet surface. The potential energy surface (PES) for this reaction has been given according to the relative energies calculated at the DFT/B3LYP/6-311G(d,p) level. Because this reaction involves both triplet and singlet states, triplet–singlet intersystem crossing (ISC) crossing also have been investigated in this paper.     

The DFT study on mechanisms for NCO with C2H5 reaction

A detailed investigation has been performed at the QCISD(T)/6‐311++G(d,p)//B3LYP/6‐311+G(d,p) level for the reaction of NCO with C₂H₅ by constructing singlet and triplet potential energy surfaces (PES). The results show that the title reaction is more favorable on the singlet PES than on the triplet PES. On the singlet PES, the initial addition processes are barrierless and release lots of energy. The dominant channel occurs via the fragmentations of the initial adduct C₂H₅NCO and C₂H₅OCN to form C₂H₄ + HNCO and HOCN, respectively. With higher barrier heights, other products such as CH₄ + HNC + CO, CH₃CHNH + CO, CH₃CH + HNCO, and CH₃CN + H₂ + CO are less competitive. On the triplet PES, the entrance reactions surpass significant barriers; therefore, it could be negligible at the normal atmospheric condition. However, the most feasible channel on the triplet PES is the direct hydrogen abstraction channel to form CH₂CH₂ + HNCO. © 2010 Wiley Periodicals, Inc. Int J Quantum Chem, 2011     

O + C<Subscript>2</Subscript>H<Subscript>4</Subscript> potential energy surface: excited states and biradicals at the multireference level

The focus of this study is to understand the multiconfigurational nature of the biradical species involved in the early reaction paths of the oxygen plus ethylene PES. In previous work (J Phys Chem A 113, 12663, 2009), the lowest-lying O(³P) + C₂H₄ PES was extensively explored at the MCSCF, MRMP2, and MR-AQCC levels of theory. In the current work, ground and excited, triplet- and singlet-state reaction paths for the initial addition of oxygen to ethylene were found at the MCSCF and MRMP2 levels along with five singlet pathways near the ^·CH₂CH₂O^· biradical at the MCSCF, MRMP2, and CR-CC(2,3) levels. One of these five paths can lead to the CH₂CO + H₂ products from CH₃CHO rather than from the ^·CH₂CH₂O^· biradical, and this pathway was investigated with a variety of CAS sizes. To provide further comparison between the MRMP2 and CR-CC(2,3) levels, MR-AQCC single-point energies and optimizations were performed for select geometries. After the initial exploration of this region of the surface, the lowest singlet–triplet surface crossings were explicitly determined at the MCSCF level. Additional MRMP2 calculations were performed to demonstrate the limitations of single-state perturbation theory in this biradical region of the PES, and SO-MCQDPT2 single-point energies using SA MCSCF were calculated on a grid of geometries around the primary surface crossing. In particular, these calculations were examined to determine a proper active space and a physically reasonable number of electronic states. The results of this examination show that at least four states must be considered to represent this very complex region of the PES.     

Computational mechanistic study of methanol and molecular oxygen reaction on the triplet and singlet potential energy surfaces

The reaction of CH₃OH with the O₂ on the triplet and singlet potential energy surfaces (PES) was carried out using the B3LYP, MP2, and CCSD(T)//B3LYP theoretical approaches in connection with the 6-311++G(3df–3pd) basis set. Three pre-reactive complexes, ¹C1, ¹C2, and ³C1, on the singlet and triplet PES were formed between methanol and molecular oxygen. From a variety of the complexes, seven types of products are obtained, of which four types are found to be thermodynamically stable. Results reveal that there exists one intersystem crossing between triplet and singlet PES. For P4 adduct that is the main and kinetically the most favorable product, the rate constants are calculated in the temperature range of 200–1,000 K in the reliable pathway.     

Ab initio MO study of potential energy surface of NH2 with CN reaction

An extensive quantum chemical study of the potential energy surfaces (PES) for the association reaction of NH₂ with CN and the subsequent isomerization and dissociation reactions has been carried out using density functional theory (DFT)/B3LYP/6‐311++G(3df,2p) level of theory on both singlet and triplet states. The reaction mechanism on the triplet surface is more complicated than that on the singlet surface. A total of 19 isomers and 46 transition states have been identified and characterized on the triplet PES. Among them, IM2 (IM2a), IM3 (IM3a, IM3b), and IM10 are the lowest‐lying isomers with thermodynamic stability. Twenty available dissociation channels, depending on the different initial isomers, have been identified. On the singlet surface, only 12 isomers and 16 transition states have been found, and among them IM1(S) and IM2(S) are the lowest‐lying isomers. The higher isomerization and dissociation barriers on the singlet surface indicate that the addition and the subsequent reactions of NH₂+CN are most likely to occur on the triplet PES because of the lower barriers. A prediction can be made for the possible mechanism explaining the production of H+HNCN. Besides HNCN, other major products are NH+HCN and NH+HNC, which are produced by direct dissociation reactions from triplet IM2 and IM3, respectively. © 2006 Wiley Periodicals, Inc. Int J Quantum Chem, 2006     

Computational study on the reaction mechanism of the gas-phase atom-negative ion of S?+?NO2 ?: comparative study of mechanism with S?+?O3 reaction as isoelectronic and isostructure systems

The reaction mechanism of sulfur vapor (S) with nitrite ion (NO₂ ⁻) has been investigated theoretically on the triplet and singlet potential energy surfaces (PESs). All stationary points for the title reaction have been optimized at the B3LYP/6-311+G(3df) level. The energetic data have been obtained at the CCSD(T)//B3LYP level employing the 6-311+G(3df) basis set. Five stable collision complexes, ³IN1 (S–ONO⁻), ³IN2 (cyclic SONO⁻), ¹IN1 (cis S–ONO⁻), ¹IN2 (S–NO₂ ⁻), and ¹IN3 (trans S–ONO⁻), have been considered on the triplet and singlet PESs through barrier-less and exothermic processes. By starting from these complexes, a simple mechanism has been obtained on the triplet PES while a complex mechanism has been considered on the singlet PES. The calculated results show that there are no favorable paths for the reaction of S with NO₂ ⁻ on the singlet PES. Therefore, the S + NO₂ ⁻ reaction proceeds only on the triplet PES to produce ³SO + ³NO⁻ as main products. The results from the comparative study of S + NO₂ ⁻ reaction mechanism with S + O₃ (as isoelectronic and isostructure reactions) on the singlet PES show similarities in the overall trend of reaction mechanism and atom connectivity and differences in the stability of intermediates and the energy barriers of transition states.     

DFT and ab initio study on the reaction mechanism of CH2SH + O2

The mechanism for the CH₂SH + O₂ reaction was investigated by DFT and ab initio chemistry methods. The geometries of all possible stationary points were optimized at the B3LYP/6-311+G(d,p) level, and the single point energy was calculated at the CCSD(T)/cc-pVXZ(X = D and T), G3MP2 and BMC-CCSD levels. The results indicate that the oxidation of CH₂SH by O₂ to form HSCH₂OO is a barrierless process. The most favorable channel is the rearrangement of the initial adduct HSCH₂OO (IM1) to form another intermediate H₂C(S)OOH (IM3) via a five-center transition state, and then the C–O bond fission in IM3 leads to a complex CH₂S. . .HO₂ (MC1), which finally gives out to the major product CH₂S + HO₂. Due to high barriers, other products including cis- and trans-HC(O)SH + HO could be negligible. The direct abstraction channel was also determined to yield CH₂S + HO₂, with the barrier height of 22.3, 18.1 and 15.0 kcal/mol at G3MP2, CCSD(T)/cc-pVTZ and BMC-CCSD levels, respectively, it is not competitive with the addition channel, in which all stationary points are lower than reactant energetically. The other channels to produce cis- and trans-CHSH + HO₂ are also of no importance.     

The DFT and ab initio investigations on the mechanism of CF3O2 + H reaction

The mechanisms for the reaction of CF₃O₂ with atomic hydrogen were studied with ab initio and DFT methods. The results reveal that the reaction could take place on the singlet and triplet potential energy surfaces (PES). For the singlet PES, addition/elimination and substitution mechanisms are determined, and the former one is dominant. The most favorable channel involves the association of CF₃O₂ with H atom to form CF₃O₂H (IM1) via a barrierless process, and then the O–O bond dissociates to give out CF₃O + OH. The secondary product might be CF₃OH + O, formed from the O–O bond cleavage in the initial adduct CF₃O(H)O (IM2). Other products such as CF₃ + O₂H, HF + CF₂O₂ and O₂ + CHF₃ are of no importances because of higher barriers. On the triplet PES, only substitution mechanism is located. With higher barriers involving, the channels on the triplet PES could be negligible compared with the channels on the singlet PES.     

A barrier-free molecular radical-molecule reaction: {^{3}C_{2} (a^{3}\Pi) {+} O_{2} (X^{3} \Sigma)}

The reaction of ³C₂ (a³Π) radical with O₂ (X³Σ) molecule has been studied theoretically using ab initio Quantum Chemistry method. Both singlet and triplet potential energy surfaces (PES) are calculated at the CCSD(T)/aug-cc-pVDZ//B3LYP/6-311+G(d) + ZPE and G3B3 levels of theory. On the singlet PES of the title reaction, it is shown that the most feasible pathway should be the O-atom of O₂ attacking the C-atom of the  ³C₂ molecule first to form the adduct 1 CCOO, followed by the O-shift to give intermediate 2 CC(OO), and then to the major products P1 (2CO). Alternatively, 1 can be directly dissociated to P1 via transition state TS1-P1. The other reaction pathways are less competitive due to thermodynamical or kinetic factors. On the other hand, the pathways on the triplet PES are less competitive than those on the singlet PES in low temperature range, whereas it is not the case in high temperature ranges. On the basis of the analysis of the kinetics of all pathways through which the reactions proceed, we expect that the competitive power of reaction pathways may vary with experimental conditions for the title reaction. The reaction heats of formation calculated are in good agreement with that obtained experimentally.     

Computational mechanistic investigation of the gas phase C2H4 + CO reaction on the singlet and triplet potential energy surfaces

Reaction pathways of ethylene and carbon monoxide on the singlet and triplet potential energy surfaces (PESs) have been calculated at B3LYP/6-311++G (3df, 3dp), G3B3 and CCSD(T)//B3LYP levels. Reaction mechanisms have been investigated by analysis of various structures. Suggested reaction mechanisms reveal that ³P3(CH₂CHCHO) and ³P4(CH₃CCHO) are thermodynamically stable adducts with the negative value in Gibbs free energies on the triplet PES. In addition, results show that one intersystem crossing exists between triplet and singlet PESs, which are obtained by scanning of the C–C bond length in ¹IN3 and ³IN7 species.     

UV absorption spectra of HO2 and CH3O2 radicals and the kinetics of their mutual reactions at 298 K

We report results of a flash photolysis study of the UV, spectra of HO₂ and CH₃O₂ radicals, obtained by using a calibration technique based on the reaction Cl+NO→NOCl. We also report preliminary results from our study of the kinetics of the reaction CH₃O₂+HO₂→products at room temperature and near atmospheric pressure. Our results are consistent with the only previous direct determination of the rate constant of the second reaction: k₁ = (6.4 ± 1.0) × 10⁻¹²cm₃ molecule⁻ s⁻¹. From the same study we derive rate constants for the self-reaction of HO₂ and CH₃O₂ radicals, which agree with recommended values.     

Theoretical investigation on the reaction of HS+ with CH3NH2

The singlet and triplet potential energy surfaces for the reaction of HS⁺ with the simplest primary amine, CH₃NH₂, were determined at the CCSD(T)/6-311+G(d,p) level using the B3LYP/6-311G(d,p) and QCISD/6-311G(d,p) geometries. All possible reaction channels were explored. The results show that three paths on the singlet potential energy surface and one path on the triplet potential energy surface are competitive. These four feasible paths provide products which are presented in the paper and they are consistent with previous experimental results. On the other hand, the stationary points involved in the most favourable path all lie below those of the reactant and thus the title reaction is expected to be rapid, which is also consistent with the experiment.