Synthesis,crystal structure,spectroscopy, and nuclease activity of copper(II) complexes containing N,N-bis(2-pyridylmethyl)amine ligand

[Cu(bpea)Cl]ClO₄ (1) and a new copper(II) complex [Cu(bpma)(Ph-COO)(H₂O)]ClO₄ (2) [bpea?=?N,N-bis(2-pyridylmethyl)ethylamine; bpma?=?N,N-bis(2-pyridylmethyl)methylamine] have been synthesized. Complex 2 was crystallized in monoclinic space group P2₁/c with unit cell parameters a ?=?16.460(6)?Å, b ?=?11.222(4)?Å, c?=?12.522(5)?Å, and β?=?97.985(6)°. Interactions of the complexes with calf thymus DNA (CT-DNA) have been investigated by UV absorption, fluorescence, and cyclic voltammetry; thus, modes of CT-DNA binding for the complexes have been proposed. Furthermore, DNA cleavage activities by the complexes were performed in the absence of any external agents. The influence of complex concentration or reaction time on the DNA cleavage was studied.     

Assemblies of 1D and 2D Copper(II) Chiral Coordination Polymers by Salicylaldehyde Schiff Bases: Synthesis,Crystal Structures,and Magnetic Properties

Reaction of CuCl₂ · 2H₂O with chiral Schiff bases and sodium dicyanamide led to the formation of two chiral copper(II) coordination polymers, namely [Cu₄(L¹)₂(dca)₄]_n ( 1 ) and [Cu₂(L²)(μ‐Cl)(dca)(H₂O)]_n · nH₂O ( 2 ) {H₂L¹ = (1R, 3S)‐N′,N′′‐bis[salicylidene]‐1,3‐diamino‐ 1,2,2‐trimethylcyclopentane, H₂L² = (1R, 3S)‐N′,N′′‐bis[3‐ethoxysalicylidene]‐1,3‐diamino‐ 1,2,2‐trimethylcyclopentane, dca = dicyanamide}. Both complexes were structurally characterized by elemental analyses, IR spectroscopy and single‐crystal X‐ray diffraction. Complex 1 exhibits a two‐dimensional polymeric structure formed by single dca bridging tetranuclear Cu₄ units. Complex 2 displays a left‐handed helical chain structure constructed from Cu₂ dimers with single dca bridges. The chirality of 1 and 2 was confirmed by circular dichroism (CD) measurements in solution. Both complexes exhibit strong antiferromagnetic couplings with J = –308(4) cm^–1 for 1 and J = –123(1) cm^–1 for 2 in 2–300 K.     

DNA Binding and Cleavage Activity of Zinc(II) Complex of N,N′‐Bis(2‐guanidinoethyl)‐2,6‐pyridinedicarboxamide

The interaction of zinc(II) complex of N,N′‐bis(guanidinoethyl)‐2,6‐pyridinedicarboxamide (Gua) with DNA was studied by CD spectroscopy and agarose gel electrophoresis analysis. The results indicate that the DNA binding affinity of Zn²⁺‐Gua is stronger than that of Gua and the Zn²⁺‐Gua can promote the cleavage of phosphodiester bond of supercoiled DNA under a physiological condition, which is ～10⁶ times higher than DNA natural degradation. The hydrolysis pathway was proposed as the possible mechanism for DNA cleavage promoted by the Zn²⁺‐ Gua. The acceleration is due to cooperative catalysis of the zinc cation center and the functional groups (bisguanidinium groups).     

基于5,5’-亚甲基二间苯二甲酸及1,2-双（咪唑基-1-甲基）-苯的Zn2+、Co2+配位聚合物的合成及晶体结构

水热条件下,合成了2个三维配位聚合物{[Zn₄（L）₂（o-bix）₂]·2H₂O}_n（1）,{[Co₄（L）₂（o-bix）₂]·2H₂O}_n（2）（H₄L=5,5’-亚甲基二间苯二甲酸,o-bix=1,2-双（咪唑基-1-甲基）-苯）,并通过红外、热重和X-射线单晶衍射进行了表征。X-射线衍射结果表明这2个化合物具有相似的结构。在1个不对称单元中,化合物包含2个不同配位环境的金属离子,1个L^4-配体,1个o-bix分子以及1个游离的溶剂水分子。中心金属离子分别采用畸变的四面体和四方锥构型,形成两类双核单元,然后通过全部脱质子的L^4-形成3D孔洞结构,o-bix配体通过连接两类双核金属原子填充于孔洞之中,形成3D紧密堆积结构。对化合物的红外和热重性质进行了表征。     

基于5,5′-亚甲基二间苯二甲酸及1,2-双(咪唑基-1-甲基)苯的Zn~(2+)、Co~(2+)配位聚合物的合成及晶体结构

水热条件下,合成了2个三维配位聚合物{[Zn4(L)2(o-bix)2]·2H2O}n(1),{[Co4(L)2(o-bix)2]·2H2O}n(2)(H4L=5,5′-亚甲基二间苯二甲酸,o-bix=1,2-双(咪唑基-1-甲基)苯),并通过红外、热重和X-射线单晶衍射进行了表征。X-射线衍射结果表明这2个化合物具有相似的结构。在1个不对称单元中,化合物包含2个不同配位环境的金属离子,1个L4-配体,1个o-bix分子以及1个游离的溶剂水分子。中心金属离子分别采用畸变的四面体和四方锥构型,形成两类双核单元,然后通过全部脱质子的L4-形成3D孔洞结构,o-bix配体通过连接两类双核金属原子填充于孔洞之中,形成3D紧密堆积结构。对化合物的红外和热重性质进行了表征。     

Temperature-controlled Hydrothermal Synthesis of Copper(I or II) Coordination Polymers via a Variety of Copper Coordination Modes

Two 1D coordination polymers Cu₂^I(C₆N₃H₄)₂(1) and Cu^II(C₆N₃H₄)₂·H₂O(2) based on benzotriazole(Bta) were hydrothermally synthesized by controlling the crystallization temperature. Single-crystal X-ray diffraction (XRD) analyses reveal that compound 1 is a 1D tubular structure constructed from two types of 1D chains {-Cu-N=N-N-}_n, where the Cu(I) ions adopt linear, triangular, and tetrahedral coordination modes to connect two types of Bta ligands via π-π interaction inside the tubular-like chain. For compound 2, the Cu(II) ions assume a quadrilateral coordination mode linking to the Bta ligands to give 1D straight chains, which stacks through π-π interactions to construct a 2D layer structure. Further characterizations including elemental analyses, infrared IR spectra, thermogravimetric(TG) analyses and luminescence properties have been done.     

Synthesis,crystal structure,DNA binding,and DNA cleavage of a zinc complex containing N,N-bis(2-pyridylmethyl)amine

A water-soluble zinc complex, [Zn(bpea)Cl₂] (1) (bpea?=?N,N-bis(2-pyridylmethyl)ethylamine), was prepared to serve as a nuclease mimic. The complex was characterized by X-ray, infrared, and UV spectroscopy. Interactions of the complex with calf thymus-DNA (ct-DNA) have been investigated by UV absorption and fluorescence spectroscopies; the mode of ct-DNA binding for 1 has been proposed. DNA cleavage activities by 1 were performed in the absence of external agents. The influences of different complex concentrations or reaction times on DNA cleavage were studied.     

基于2-(4'-羧基苯基)咪唑-4,5-二羧酸构筑的三个镉/锌配位聚合物的合成、拓扑结构、荧光光谱及DNA作用

以2-（4''-羧基苯基）咪唑-4,5-二羧酸（H₄CPhIDC,C₁₂H₈N₂O₆）为配体,用溶剂热合成了3种配位聚合物{[Cd₂（CPhIDC）（bimb）]·H₂O}_n（1）、{[Cd₂（CPhIDC）（phen）₂]·3H₂O}_n（2）、{[Zn₂（CPhIDC）（bpp）]·1.5H₂O}_n（3）（bimp=1,4-双咪唑基-丁烷,phen=1,10-菲咯啉,bpp=1,3-双（4-吡啶基）-丙烷）。用元素分析、红外光谱、粉末X射线衍射和单晶X射线衍射对配合物进行了表征和结构分析。结构分析表明,主配体以完全去质子化CPhIDC^4-的形式与中心金属离子形成以μ₄和μ₅为配位模式的二维及三维聚合物。配合物1和3是三维网络结构,同时呈现（3,4,5）-连接的（5·6·7）（4·5²·6·7²）（4·5²·6·7⁴·8²）拓扑结构,两者的不同之处是中心离子和辅助配体。配合物2是二维波纹状渔网结构,呈现4⁴·6²拓扑结构,在其空间填充上又类似于DNA双螺旋链的单螺旋结构。测定了产物的固体荧光光谱;用EtBr荧光探针法研究了配体及配合物与ct-DNA的相互作用。     

两个二维层状4-双(咪唑基-1-甲基)-苯钴和镍配位聚合物的合成与表征

以1,4-双(咪唑基-1-甲基)-苯(bix)为配体,间苯二甲酸(IPA)为辅助配体,合成制备了两种新型同构配位聚合物:{[Ni(bix)(IPA)(H_2O)]}_n(1)和{[Co(bix)(IPA)(H_2O)]}_n(2)。单晶结构表明,此两个配合物均形成二维层状空间结构,金属原子均为六配位八面体结构,赤道平面上四个配位原子来自间苯二甲酸和配位水分子,轴向两个配位原子为bix配体的咪唑环上的N原子。金属原子通过配体连接形成四连接的二维4(4).6(2)方格层状结构。     

Synthesis,Characterization, DNA Binding Properties,and Antioxidant Activity of Novel Copper(II) and Zinc(II) Complexes with Bis(pyrrol‐2‐yl‐methylamine) Ligands

Three novel ligands H₄Lⁿ (n = 1–3) and their copper(II) and zinc(II) complexes were prepared and characterized on the basis of elemental analyses, molar conductivity, ¹H NMR, UV/Vis, and IR spectroscopy as well as mass spectrometry. DNA binding properties of the ligands and their complexes were investigated by absorption spectroscopy, ethidium bromide displacement experiments, and viscosity measurements. The experimental results indicate that the new ligands and their complexes can bind to DNA and the binding affinities of the complexes are higher than those of the ligands. In addition, the antioxidant activity of the ligands and complexes was determined by superoxide and hydroxyl radical scavenging methods in vitro, indicating that the complexes exhibit more effective antioxidant activity than the ligands alone.     

Spectroscopic Study of DNA Hydrolysis,DNA Intercalative,and Electrostatic Interaction Activity Exerted by Drug Based Coordination Compounds

Our work emphasized on synthesizing and characterizing neutral mononuclear copper(II) complexes with second generation fluoroquinolone drug ciprofloxacin (CFL) and some bipyridine derivatives (Aⁿ) of type [Cu(CFL)(Aⁿ)Cl] · 2H₂O. The DNA binding free energies were evaluated by studying the effect of salt concentrations on DNA binding. DNA interactions were investigated by using DNA melting temperature studies, viscosity measurements, absorption titration, and gel electrophoresis experiments. Also superoxide dismutase (SOD)‐like activity (IC₅₀ values) and antibacterial activity of metal complexes were studied. To validate the proper mechanistic pathway for plasmid DNA cleavage, gel electrophoresis experiments were carried out in presence of radical scavenging agents. The bactericidal activity of metal complexes was evaluated in terms of colony forming unit.     

Synthesis,Characterization, Structural Description,Micellization Behavior,DNA Binding Study and Antioxidant Activity of 4, 5 and 6-Coordinated Copper(II) and Zinc(II) Complexes

Four mononuclear copper(II) and zinc(II) complexes were synthesized by the reaction of copper and zinc salts with 3,4-dichlorophenylactic acid, 2-bromophenylactic acid, biphenylacetic acid (O-donor ligand) and bipyridine (N-donor ligands) having the general formulae [(L)₂Cu(bp)(H₂O)] ( 1 ), [(BpA)₂Cu(bp)] ( 2 ), [(L)₂Zn(bp)(H₂O)] ( 3 ) and [(L*)₂Zn(bp)] ( 4 ) (L = 3,4-dichlorophenylacetate, L* = 2-bromophenylacetate bp = bipyridine, and BpA = biphenylacetate). Structures of all compounds were characterized through FT-IR spectroscopy and X-ray diffraction analysis. FT-IR spectra of all complexes confirmed the binding mode of Cu-O and Zn-O. XRD data revealed that complexes 1 – 3 exhibited distorted octahedral arrangement, whereas complex 4 has a distorted tetrahedral environment. Micellization behavior was examined with anionic surfactant (SDS) by conductance measurement as well as absorption spectral analysis. DNA binding study was assessed through viscosity measurement and UV/Vis spectrophotometry. DPPH free radical scavenging assay was measured by UV/Vis spectrophotometry. The results showed nice biological potential of all the complexes.     

Luminescent Thermochromism of 2D Coordination Polymers Based on Copper(I) Halides with 4‐Hydroxythiophenol

Solvothermal reactions between copper(I) halides and 4‐mercaptophenol give rise to the formation of three coordination polymers with general formula [Cu₃X(HT)₂]_n (X=Cl, 1 ; Br, 2 ; and I, 3 ). The structures of these coordination polymers have been determined by X‐ray diffraction at both room‐ and low temperature (110 K), showing a general shortening in Cu?S, Cu?X and Cu?Cu bond lengths at low temperatures. 1 and 2 are isostructural, consisting of layers in which the halogen ligands act as μ₃‐bridges joining two Cu1 and one Cu2 atoms whereas in 3 the iodine ligands is as μ₄‐mode but the layers are quasi‐isostructural with 1 or 2 . These compounds show a reversible thermochromic luminescence, with strong orange emission for 1 and 2 , but weaker for 3 at room temperature, whereas upon cooling at 77 K 1 and 2 show stronger yellow emission, and 3 displays stronger green emission. DFT calculations have been used to rationalize these observations. These results suggest a high potential for this novel and promising stimuli‐responsive materials.     

4-(1H-1,2,4-三唑-1-亚甲基)苯甲酸过渡金属配合物的合成、结构、抑菌活性及DNA裂解活性

以4-（1H-1,2,4-三唑-1-亚甲基）苯甲酸（HL）为配体,水热合成了三个过渡金属配合物[Cu_0.5L]_n（1）,{[Ni（L）₂·（H₂O）₂]·（H₂O）₂}_n（2）,{[Co（L）₂·（H₂O）₂]·（H₂O）₂}_n（3）;运用红外光谱、元素分析、单晶X射线衍射、热分析、紫外光谱和荧光光谱等手段对化合物进行了表征. 结构分析表明,配合物1 呈现一维（1D）的链状结构,而同构的配合物2 和3 则通过链间的氢键连接为三维（3D）网状结构. 抑菌活性研究表明,配合物对镰刀菌、苹果腐烂病菌、苹果轮纹病菌、梨炭疽病菌和烟草赤星病菌均有良好的抑菌效果,特别是配合物1 的抑菌效果最为显著. 质粒DNA（pUC 18）裂解活性实验结果表明,相比较于化合物2 和3,化合物1 能更有效地促进质粒DNA裂解. 进一步采用光谱法检测三种配合物对DNA的结合作用. 结果显示三种配合物均可插入DNA分子中,其中配合物1的插入作用最为强烈.     

DNA Cleavage Promoted by Cu^2＋ Complex of N,N＇-Bis（2-aminoethyl）-2,6-pyridinedicarboxamide

The interaction of Cu^2＋ complex of N,N＇-bis（2-aminoethyl）-2,6-pyridinedicarboxamide （BAP） with DNA was studied by agarose gel electrophoresis analysis. The results indicate that the BAP-Cu^2＋ complex can promote the cleavage of phosphodiester bond of supercoiled DNA at physiological condition, which is 3.2 × 10^6 times higher than DNA natural degradation. A hydrolytic cleaving mechanism through the cooperation of copper ions and functional amino groups was proposed.     

Copper(I) and copper(II) complexes with pyrazine-containing pyridylalkylamide ligands N-(pyridin-2-ylmethyl)pyrazine-2-carboxamide and N-(2-(pyridin-2-yl)ethyl)pyrazine-2-carboxamide

Four copper(II) complexes and one copper(I) complex with pyridine-containing pyridylalkylamide ligands N-(pyridin-2-ylmethyl)pyrazine-2-carboxamide (HL^pz) and N-(2-(pyridin-2-yl)ethyl)pyrazine-2-carboxamide (HL^pz?) were synthesized and characterized. The X-ray crystal structures of [Cu₂(L^pz)₂(4,4?-bipy)(OTf)₂] (1, OTf?=?trifluoromethanesulfonate, 4,4?-bipy?=?4,4?-bipyridine) and [Cu(L^pz)(py)₂]OTf·H₂O (2, py?=?pyridine) revealed binuclear and mononuclear molecular species, respectively, while [Cu(L^pz)(μ₂-1,1-N₃)]_n (3), [Cu(L^pz?)(μ₂-1,3-N₃)]_n (4), and [Cu(HL^pz)Cl]_n (5) are coordination polymer 1-D chains in the solid state.     

4-(1H-1,2,4-三唑-1-亚甲基)苯甲酸过渡金属配合物的合成、结构、抑菌活性及DNA裂解活性

Three novel transitionmetal compounds [Cu_0.5L]_n (1), {[Ni(L)₂·(H₂O)₂]·(H₂O)₂}_n(2), and {[Co(L)₂·(H₂O)₂]· (H₂O)₂}_n (3), were hydrothermally synthesized with 4-(1H-1,2,4-triazol-1-ylmethyl) benzoic acid (HL) and characterized by infrared spectroscopy, elemental analyses, single-crystal X-ray diffraction, thermal analyses, UV-Vis spectroscopy, and fluorescence spectroscopy. Structural analyses reveal that compound 1 features a one-dimensional (1D) chain, while isomorphic 2 and 3 exhibit a three-dimensional (3D) network structure with interchain hydrogen-bonding. Antifungal activities tests reveal that 1 has the highest antifungal effect on the five fungi (Fusarium graminearum, Vasa mali, Macrophoma kawatsukai, Colletotrichum gloeosporioides, and Alternaria alternate) among the three compounds. Furthermore, DNA cleavage experiments indicate that compound 1 has more efficient DNA (pUC 18) cleavage activity than compounds 2 and 3. The binding properties of the three compounds with DNA were also investigated by absorption. The results show that the three compounds can intercalate into DNA, and the interaction of compound 1 is the strongest.     

Efficient Cleavage of DNA by the Novel Copper (II) Complex Derived From 2,2'-Pyridil Ligand

Due to the importance of oxidative degradation of nucleic acids in mutagenesis, carcinogenesis, and aging, a large number of chemical and biological investigations have been recently published1. Artificial metallonucleases have been proven to be efficient tools for the footprinting and sequence-specific targeting of nucleic acids1,2. They usually require high concentrations of the complex and of an external reducing agent (such as dithiothreitol, DTT) to form a reactive species in situ, the f…     

含1，3，5-三-((4-吡啶)-1，2-乙烯基)苯的配位聚合物的合成、结构及性质

用三烯烃三吡啶配体1,3,5三-((4-吡啶)-1,2-乙烯基)苯(tpeb)和M(NO_3)_2(M=Co,Ni,Zn,Cd)以及4种不同的有机羧酸(3,5-二溴苯甲酸(3,5-HDBB)、2,5-噻吩二羧酸(2,5-H_2TDC)、2,5-呋喃二羧酸(2,5-H_2FDC)、2,5-二溴对苯二甲酸(2,5-H_2DBTP))进行溶剂热反应,得到了[Zn(tpeb)(3,5-DBB)_2]_n(1)、[Co_2(tpeb)_2(2,5-TDC)_2]_n(2)、[Co_2(tpeb)_2(2,5-FDC)_2]_n(3)、[Co(tpeb)(2,5-DBTP)]_n(4)、[Ni(tpeb)(2,5-DBTP)]_n(5)、[Cd(tpeb)_(0.5)(2,5-DBTP)]_n(6)六个配位聚合物。对配合物1～6分别进行了单晶X射线衍射、粉末X射线衍射、红外、元素分析、热重、荧光等结构表征。配合物1～6结构独特且多样。配合物1是由[Zn(3,5-DBB)_2]单元通过配体tpeb桥联构筑的一维zigzag链状结构;配合物2和3是由一维梯状[Co(tpeb)]_n链分别与2种不同的五元杂环二取代羧酸桥联构筑而成的二维双层结构;配合物4和5均是由一维[M(2,5-DBTP)]_n(M=Co,Ni)链通过tpeb交叉连接而成的三维网络结构;配合物6则是由二维的[Cd(2,5-DBTP)]_n层状结构通过tpeb连接而成的三维互穿拓扑网络结构。配合物1～6的热稳定性较好,它们在固态时表现出不同的荧光性质。     

全反式维甲酸合钇(Ⅲ)配合物对DNA的切割和键合作用(英)

以紫外光谱、荧光光谱、粘度法和凝胶电泳方法研究了全反式维甲酸合钇(Ⅲ)配合物与DNA的作用。结果表明，该配合物能在生理条件下比配体和金属离子更有效地切割质粒DNA，体系离子强度和pH值的变化对配合物的切割活性有较大影响，自由基捕捉剂的加入不影响配合物的切割活性。该配合物对DNA的切割可能通过水解机理进行。该配合物可使DNA的粘度增加，使EB-DNA体系的荧光强度和DNA溶液的紫外吸收强度降低。据此推断，该配合物主要以嵌入方式与DNA作用。